TCONS_00005787 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005787
Unique NameTCONS_00005787
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length614

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005787 ID=TCONS_00005787|Name=TCONS_00005787|organism=Clytia hemisphaerica|type=transcript|length=614bp
ttaaaacatttctGAAACAACTTTCGTAGAGAGTTCCACGAAGCAAACAA
ATTGAAACAACCGCCTGACGTCAACAAAATTAAGcaaTGAAAATGCTTCA
TCAGCCAATCAGAATCACTCTCTTTATAATCTTCACAATGAAGGTAGGAG
GTGCACCACGTGCTCAAAAGAATGTCCAAAACACCCGAGAATATAACTAT
GACACATGCAAGGGCGTTATTGAAGATTACCACCCTTTTATATTTGGCGG
AGGGTGTCCGGGATCAACAATTGTTAAGTATTGGATATGTCCGAATTATT
GTTACCAAGATTCTTTTGATGTTGAAAAGAAGATGATGGTTGATACACTA
CACCGTTGTGTACCAGACACTTCGGTACCGGTGAAAACGATTTGTAATGG
TTCAGTTGTGTTTGAATATCTGAAAGTTCTTACATGCAAATGTACAGTTT
ACGACCGAAACAAGTTTTATGGCTGATTGATTGATGAAAAACTAATTACC
ATTGACACAACAACTAATAAAAATATGCAAGAATTTATTTGCTTCGAGGA
CATTGAATTTTGAGGGTTAAATACTGGTGGAAGAACTTTAGAACCTTGGA
AGTTTAGCATTAAC
Run BLAST on NCBI

protein sequence of TCONS_00005787-protein

>TCONS_00005787-protein ID=TCONS_00005787-protein|Name=TCONS_00005787-protein|organism=Clytia hemisphaerica|type=polypeptide|length=129bp
MKMLHQPIRITLFIIFTMKVGGAPRAQKNVQNTREYNYDTCKGVIEDYHP
FIFGGGCPGSTIVKYWICPNYCYQDSFDVEKKMMVDTLHRCVPDTSVPVK
TICNGSVVFEYLKVLTCKCTVYDRNKFYG
Run BLAST on NCBI

transcript from alignment at sc0000059:727434..746911-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005787 ID=TCONS_00005787|Name=TCONS_00005787|organism=Clytia hemisphaerica|type=transcript|length=19478bp|location=Sequence derived from alignment at sc0000059:727434..746911- (Clytia hemisphaerica)
TTAAAACATTTCTGAAACAACTTTCGTAGAGAGTTCCACGAAGCAAACAA
ATTGAAACAACCGCCTGACGTCAACAAAATTAAGGTAAGCTCGTTCGATT
CTTTAGAAAGATTTTTGCAAACGCAAAAGAAAGTAGCTGGCCCTTTTGAA
TAATACCGTAGGTAAGCTATAGATTTATAAAGTCCGAAGGGCTAGATGTC
GTGATTTTGCTGAAAAGTGCGCCGACGTTAGATGGGAAATCCTACCTAGG
TCACGTGACATTACAATAGAATTTTAGAAGCTTCGCGGGTTTTTTTTGGC
TGCGATGGCTTAAAGCACGATCTAGCCCTTCGGGCTTTATACATTTGTGA
GGATAGCTAAATTTATCATTCCCGGGGAAACATTCCTGCCGTACTTCCTG
GACACTTTCTACCGTTTACCGGGTATACCAGCAAAACTATTTTCCCACTG
CGTACAAGTGTGGACAACCTTCTCGAGACTCCACCTAACAATTCAAAGCT
ACCTTTGTAACTACCAGTTGCTGTTCTGTTTGGCTGCCATGGGTAGCCTG
GGGAAGTTTTGGAAGCACAGGTTTACACTTTCATTCTCTACGGAGATCAA
GCTGTACTTTCACTTTGTACGTTGTAATAAAATTGTGCTACCATTGTTTT
TTTATCTTGTTTGAAAATCTGACTTCAGTGAAAATCTGAAAGTGCTCTAT
ACCATCGGTAGAGCTATATATCAGTCAAGAATAGAGACAAATTTATTTTC
CGATACTCGGAGTTTCGTGCCGTTTCAGGAAGTCTTCAGTCAGATTTCTA
GAAAATTACAAAAACGACATTCGCAATGTCAATCTTCAATTATACAGTAT
GATGTCTTTATTTGTCAAAATTGACGTCATTTCAGTCTTTGCTGTCAAAC
AAGGCGAGGGTGTGCTTGTTGACATGTCTACATTTTGATATCAGTTCAGA
TTTTGAGTTCATGATGTCGCCGAATTTTGTGGTGATTTCAAGCTTTTCAT
TTAAGCAAAGATTATATTTCATCGAGGCTCGTTGGAATCCACCAGTTCGT
CTAACGATTTTCCACGATACGGTTGGGTTCTTGTTTTGACGTTTGAATTT
CCAATATTGTTTGGAAAGTTCTGTTTTGTTTTCATACCGCTCGTGATTAA
ACGACTTCTTGTGGTTGCTGAACCGTTTTTTAAATGTAGTTTCAGCGAGA
CCGATGTACACAGGAAAAAGTATGGAAATCACATGCTTGGTAAAACTGAT
TTCCGAGCATGTGATTCTGCAAAAAATCACATGCGTGTGAAAATGCAATT
CACAAGTCATCTTTTCCCAACTTAAATGGAGTGTCTGACTAGATCTAAAA
TCACAAATAGGATTGTTTGTCTTTCTTAGAGAGAGAGATTTAATACCCTA
CAAGTGATACTTTTATGGACCTACCTGGTTATGCATTTAACACATATATA
ATTGATATCTGCGCGAGCGTGACCGTTAAACAATCATTCAGAACACAAGT
AGTGACGATCTATTAAAATTAGTCGTTTGTTTCTTATAAAAAAAAAAGGT
TTAGAAACCAAAATTTCATACTCTTGAAATATTTTTTCATATTCAAGACT
TTGTGAGCAAAAAAAACATCTATCTCATTAAAAAATTGAGTAATTTAACT
AAGAACATTGATGTATGCTTATTAATAGCGATTCTTATAGATAAACATGC
GATTTTTGAGCCAACAAAATTTTTTTGAAAAAATCTGCTTGAGCCATCTT
TTACCCATGATGGTACCCTACTTTCATGCCAAAAATTAGAAAAAGTTAAT
GATCCAATTTTTCACAAAGTCCAAAAAACCCGTTTTTTAGCCGTTTTTTG
GCCCAAATTTGCCCAAAATTTTTTTTTTTCGAAAATCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTTTTCGAAAATCGGGCTTCGTCACATTTGAGGGTTTATAG
TTATGCATCTTTGTGCAAAAAATCAGAAAAAACTAATGAGCCAATCACAA
GGAAAGCTAATAACGAACGAACAAACGAACGAACGAACGATCGGACAAAG
GTTAATTTATAGGACCTCCACCCCACCGGGGTAGGTCCAAAAAAAGCGAA
CGGAATAAATCAAGCGATGTCGAAGAAAGATCATGTATTCAGAGTCCGAG
GAAGTCCTCGCGACAAAATTTATTTTAGGAAAATATTTTGTAAAAGATCG
GTTTAAGAGGCGCCTAAAACCATATTTCTCTTTAAATATTGTGAAGCTAG
TAAACTAATCATTGATGAATAATGCAAGCAGAGACTGGGACTGAGCCAAC
ACGATATTAATGAACTGAAAGATGAATAGAAATCAATANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGAA
CTTGAAGGAGAAGGACTTGAAAGAGAACTATCGTTAATTACATGCCAGAG
TTACTAAGTTATTTGATGTTATTTATGTTACGCTTATTTGATATTTATTA
CTTAATTGGAAAAAGACCTAACTTCCCTTCGTCACACTGAAGGTGAACCA
GAAGAACTCGCTTCGCAAGAATCAAAAATCCAAGAGGAGAGAGCTACATT
ACACCAAGGAACAAGAACAATAAAAGATTGTAGTAGAATACTACTTAATT
ACACCACAGAAACTGAACTATTATTGATTGGTAGTTTGGTTGATTTCGCG
ATTAATAAGGACACGTTATTTTGAAAAGGACAAAAGTGATTTTACATCAG
AAAGTATTAAAAACTATCAAAACGAGAGTTTTACACAAAATCAATTATTT
AAAGTTCAACGAGAAGAGAAGTTTAACGTCAAACTCTCGGTATCAATTAT
TCAACAAACTTGAACGCAGTGAACCTTTGCCGTAACCAAGCATTGGTTAC
AATTGATCCAAGCATTGGTTACAATTGATTCAAGTAAAATAATACCTAAC
ATTGTGCAGTAAATTTTGATTTCAATTTTGTGTTTTGAATCGAAAGATAA
ATAAGTAAAGGAAACTAGGCAAGAGGAATACAGCATCTAGAGGTAACACA
TTTCGACTACTTATAAATCATTCAACATGCAACTCGCTAAAACGACAGTG
TCGATGAAAGCGAAAACAAGCCAGCAATGACGAGTATCTTCAAGATGAAC
GTAATCCAAATGACTTTGAACGATATACCACAATTCAATGGAACCAGTAA
TGAAAATATCAAAAGCTATTTCGAACGTTTCGAGAGCATAGCAACCATTG
GCAAGTGGAGCTCCAAAGAACGTTTGAACGTTCTAACAGCATATGGCTTA
CAAGGTCACGCGATGCACTATTACAGAGCGCTACCAGCAGACGTGAAGCC
TTCATACAAACTGATAAAAGAGATGTTGCTGAACTACTTCTGGTCGTCCG
ATATCAGAATGTTAAAGAAAGCTGAACTAGTCAAACTCAAACAAGAGGAA
TGTCCATCACTAGATGCCTACATTAAAAAACTCGAAGATCTAGTGTATCA
ATTAAATTACAGCAATGAGCAGAAATTGAACTCGCTCATCGCCGGACTGA
ATGACGATTTACGAATATCGGTTATTTTAAAGAGATTCAAAACCTTCAAT
GAAGCAGTGGCTTACATCAGATTAGAGAACGCGATCAAGCCGAATTACAA
TGTGAACTCCGCCAAACTGTTCAAGAAGCTGAACGAAAAGATCGACAAAT
TAGCAGCTGGCGCGTGTACTGTCCAATCTTCCGGTGCAACACCAAGACGA
GTGTCATTGAATGAGTACGCCGGTGAAAGAGATCTCGATGAACAAGTATC
CGAGGTGATCGAACAAAAGTTACGAATGATAATGCCTCAAACAATCAATA
CGCTTGGCCGACCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTCC
ATAGACTTATCCCCAATAAGGGATACCCTGATCGAAGGAACAGATAAGTG
ATCTGAGAGGTCCCCTCAATAACTAAAGGGTGACCCCAATCGCCTAAATT
CCCTTCGTCACAATATAATAAAAATAATAATAATTGTTTGGGGGAGGGAG
AGGGGAGGGAACTCATTTTTGGGCTTTGTGCCATAGGTTTTGTCAATGAT
TGTATGAAGACAATCTGTCAGAAAAGATATCAGCGAAAATGCATAACGCA
TTAAATTTCATCATTGATTGTTGACGAGGGGGGGGGGGGGGGGGGAGGGG
AAAAAGACATAGAAAGTTCCGGTTGCAAAGATCAGTTTTATTGACAATCG
AATCATGCTTGATGGTGGTGTTTTTGTGTGAAAAAAAACACAAAACATAT
AGGGAAAAAGTCCAATGAAAATCTGCAAAAAAGGCGATTTCCGACATATT
CGAACGTAAAAAATTTGTTCTCAAAAATCCGAATCGGCCACAATTTGGGC
ACATTACTGATACGCATCTTTGTGCAAAAAAATAGGGAAAACTAATGATG
AAATCTCGAAAATATACCAAAAAACCGGTTTTTCTGGCATATTTTTGGCT
GGAAAATTTTGCTTATCAAAAGTCAGGCTCCGTCACATTTTAGGTATTGC
CATTTTCCATCAGTGTACAAAATTTCATGAACAAATATAAAGTAAAGCTC
GAGGAATTCAAGTGAAACCATTTTCCGCGATTTTTAGAAAGTTCCGGTTG
CAAAAATCTGTTTTATTGACAATTGAATCATGTTTGATGGTGGGCATTAT
TATCAATAATGTTTTTATGTGAAAAAAAACAAAGAAATGCAGGGAATAAG
TCCAATGAAAACCCAGAAAAACGGCGATTTCCGTCATATTAGACTGGAAA
AAAATTTTCCTCAAAAATCGGACTAATATGCATCTTTGTGCAAAAAACTA
ATGTTAAAATCTCGAGAAAATGCCAAAAAAACAAACGGTTTTCCGGCATA
TTTACGGCATTTTTGGCCGGAAAATCTTTTTCGAAAATCGGGCTCCGTCA
CATTTTGGGCATTACTATTTGGCACCATTGTGTGAAAAATCAGAAAAAAA
CAATGAGCCAATCTCGAGAAAAGCTGGTAACAGAAGGACAAACGGACAGG
CGGACGGATGAACGGACAAAGGTTAATTTATTGGACCTCCAGGTAGGTCC
AAAAATGTTTTCCAAATAAATTTAACGTATTAAGGGTCAAATTTTTATGT
AAGCATGGAAATCAATTCTGGTCTGTAAATTATGTAGCTGCTAATGTTTT
TAAGTTTGGGATTTAAATAAGATTTTCACTTTAACTATACTAGCTTTTGT
GAACAATTTTGATAAAATCTATTTAGCATAGCCATACTGTATATTTACAA
TAAAATTATTGAATTCTTAAAAATTCGAAAAGAGAACGTTTATCTGGCAC
GTTTTTCAAACAATCAACAAACATCATTAATATAACATCAATCAACAGAT
GGGCCGGATGGACCATACCATTCAAATCAAGACTTTAAATACAAACTTAA
TTTGATTAACTGAATTTAAACTTTAAACAAATTATGGAGAAACTTTTCAA
TCAACAGATGGACACACTAGAGCCCAGACCTTGAATACAAACATGAATTG
ATTGAATTCAGAATTCGTTTATCCTATTTATTTTACACGAGTTATAGAGG
AAATTTCAATCAACAGATGGACTCACTAGAGCCCAGACCTTGAATACATG
CATAAATTGATTGAATTCAAAATTAGTTTATCATATTTATTTTGAACAAA
TTATGGAGGAAACTTTCAATAAAAAATGGGACTATATCACGTCAAGTCTA
ACAATTTCGATCATGATTTCGTGAATAATCCGTCTAATCAGTAAGTCAAA
AACTCTAAAGGCTTTGGGACACGAGAAGTTTTTTTCCCGTTGGTGCAATG
CAACATGCTCCATCCAACCAACCTGAAACGCATTCTCCTGTCTCCACACC
CTTTTTCTTTCAACCAATAAAAGTCAAATCTCACTTTTGTCCCTGGGACA
ATGAAGCAAAATCGATTCAGGGACAAAATCAGCGTGCCTTTTGGGTATTT
CCCTCACTTTTTGTCCCATGAAACAAAAAAAAACCATAGGACACGTACTT
TTTTTCTTGTGTTGGTGGGAGAGAGCATGTTGCATTGCACGAACGGGAAA
AAAACTTCTCGTGTCTGGGTTTCCATTCAACTAGCGGGCAGTGCGTTGCG
ACCAAAATTTCCTTTAATAGCTCATTGACGTCAGAAAATGTAAATATTTG
TACACAAAGTTAGAGCTCTTTCGAGCGCTGATGTGCAAGTTTTAAATATA
AAAATGGTCGCAACGCACTAGCGACCAGTGGTTGATTTCCATTCATCTTG
AGATTTAAAAGAAGTGCTCGAAATCTTCAAAAGACTTCATCACAATCTGT
ATACATTTTTATATTTTTTATATGTTTACTCTCTTCTGATTGGCTAAAAC
TATTTGATCACTGTATGAGCTTACACGCGCGCTTTTGGAAGTTGAACATT
TAAGCTGGGTTTCCATTCACCGAGCGGGCAGTGCGCTGCGACCAAAATTT
CTTTAAATAGCTCAATGACGTCAGAAAATGTAAATATTTGTACACAAAGT
TAGAGCTCTTTCGAGCTCTGATGTGCAATTTTGTGCAATTTTGGTAGCTG
AAAAATTTCAACTTCCAAAAGCGGGCGTGCGAGCTCATACAGTGATCAAA
TAGTTTTAGCCAATCAGAAGAGAGTAAACATGTAAAAAATTAAAAAATGT
ATACAGATTGTGATGAAGTCTTTTGAATATTTCGAGCACTTCTTTCAAAT
CTCAAGATGAATGGAAATCAATTACTGTCCGCTTGCGCGTTGCGACCACT
TCTATATTTAGAACTCTGGTCGCAGCGCACTGCCCGCTAGGTGAATGGAA
ACGAGCCTTTACAGCTACCAAAATTGCACAAAACTGCACAGCAGAGCTCG
AAAGAGCTCTAACTTTGTGTACAAATATTTATATTTTTTGACGTCAATGA
GCTATTAAAGGAAATTTTGGTCGCAGCGCACTGCCCGCTGGGTGAATAAT
ATTATAAAGTCATAAAATAACACTTATACTTTAACATTTTAGGGAGCAAT
GTATACAAATAACATCACATTGAGTTCCCTTTGTTTTAGTGTGCTTTTGT
TGGCATCAATTACAAGGGGAGACCTGATGGTTTCATCGTGTTTAGAAGTC
AGAAATATCACCCTTATTCCGATTATTATAATCAAGGATGAGGCTGTAGG
AAATCCTAATATAAATTTTCAAAGCTTAAATTACATGGATACACAGTTAA
AATACTTAGTCAAATCAATATTGGATAAACCTTGCTTTACATTTTGGGCA
TTTTCTCCAATACAAAGCCGCTTGATTCGGCTTACTGAGGAAAATTATAG
AGAGTTTTTCGAGACTGATTTCCAAGCTATAACACGGACTGATGGGAATG
AACTGATAAAGGTGTTGGAAAACATGCCATATAATAACATAACTAGCAAA
CAAACGATTTTCTTTTTGGTAGAGGGGTACCAGGTAAAAAAACAGATTTC
AGTGATCAAGAAAGCAAAAAAAATGTGGCAACGAAAAGAAAGCGATTTCG
TGGTATGGAGTTTTGATTTAAGTAGCGATAAATTATTTCTTGATTGGATA
CGAAAAGAAAACTTTATTCAAAGTCTCACCCCAGATTCCAATCCATATAC
AGATAATACCAAGCATGCATTCGATCCACACTTGCATCAAATTCTAATGG
ATCAAATGGTCAATCCCCGGTACGACTGGCGTGAAAAATATTCACCTCAT
TTAAAAGTTCAATGCGGTTCATCTTCCAAAGAGCTTTATTTCTATTGCTG
GGAGAAATGTGTTGGTTGTCATCATTATGCAATCTATGACTTTTGGAATA
TTATTGTTCAAGCTGTTTTCCCCAAGGCAATATTTCACACAGTCACTGTG
GATGATGCGACAAGAATATACACTTCTTTCGAATTTACAAGCATAACAAT
AGATGAATTAATGGAGGATTTGAAAGAAGAAGAAGAATACGATGAAATAG
TTGTCATCCATTTACCTTTTTTTAAGGAAAAGGTAGATGATACATACCAA
CCAATGAAATTCAACGATGATAACACAATCAATTTAATCGAAAGCAGTTT
CATTGACCAGTTCCCTGTCCTTCAACATGGAAATATTGTTGTAAAAGATA
GGGACGATTATCGTAACCCCGTGTTTTTCAAATTGCTATTTGAGAAAATC
AACTCTATTTTGTGTAAAAAAAATTGAATAAACATTTTGACTGTTACAAT
TCTGAAGGATTTGGCATTTATCATGATTTATAACATTCTTGAATTTTTCA
GCAAAAATTATCTCTGCAGGATGTCCCAACAATAAAATCTACTGCTCATC
AAAATCTGTTATTATGGGACACCCTGTAGGGAAATGAGAGTCTGTTTATC
GATTGTAAATTCTGTACGTAATATAGAAGTCTGTTTAACACTGAGAGACA
TGAATGTGTAGTGAGTTATATGTGAGAAGTGCGTTTTACTATAAGTTTAA
TCTAATGTAACCTATTTCCTTCTTTCTTAATTTGGTCAGTTTAAAGAATT
TATTTGCATTTTATATCTTTTGTTCTCCATTTTCTATTCCATTTCAAATC
CGAAAATATCCTTTATAATATTATTATAGAATCAAATATTACACGTTTTT
TTTATTAGAACACCAAAAATTTTGCTAAGCCTGGATGTGCTAATTTATTT
AGCAATTTTCAGCCTAAAATGTTCTTAAATGAGTTCTTAATTTTTCGAAC
TACTCTAAATCGACAACACCATGCACTTAAAATTGGTAAAATTTGGACAT
AATTTGACTCTCGATTTTAAAAACGTTCGGTTAAAACTGCTTGAAACGAG
GAAAAAAATGTAGCTTCTTGTAATATTTTTCCAAACTGAGACTGCGCATG
TTCTCAAGGTGTTCTTAATTTTTCGACGAATTTCAGCCTCGATGTTCTTA
TTAACTGGGTTCTAATAAAAAAACCGTGTAATGTTTAAAGGCTTTGTTTT
CACATAAGTGTTCCCGTTTCATATCAGACACATATTTCATGTCAGGACAT
TGTCTTCCTATTATTACATTATGCTTATATAAGCAAAAAATGTTTTTGTT
TTCCTCTTTCTGACCAATCTTGCTCCACATCCGTATCGATCGAAAGTGAT
ACTTTTATGGACCTACCTAGTTATGCATTTAACACATTATATAATTGATA
TTTACGTGAGCGTGACCATTAAAAACAATCATTCAGAACACAAATAGTGA
CGATCTATTAAAATTAGTCATTTGTTTCTTATAAAAAAAACTTTTAGAAA
CCAAAATTTTATGCTCTTGAAACATTCTTTCATATTCAAGACTTTGTGAG
CAAAAAACATCTATCTCATCAAAATATTGAGTAATTTGGCTAAGAACATT
GATGTATGCTTATTAATAGTGATTCTTATAGATAAACATGCGTTTTTTGA
GCCAACGAAATTTTTTTGAAAAATCTGCTTGAGCCATATTTTACCTATGA
TGGTACCCTAATTTCATGCAAAAAATCAATTAATGATCCAATTTTTCACA
AAGTCCAAAAACCCTGTTTTTTAGCCGTTTTTTGGCCCAAATTTGCCCCA
AATTTTTTTTTTTCGAAAGTCGGGCTCCGTCACATTCGAGGGTTTATAGT
TATGCATCTTTGTGCAAAAAATCATAAAGAATCAAAGAGCCAATCTCGAG
AAATGCTAATACCTAAGTAATTGATAATGTGCTTATAAATAAATATCAAT
TTGGCCAGTTTTTCTATAAAAACACGCCAAGAAACCAAAATTTCATGTCT
AAAGACATAGATTCTTCAAAAGTAAGACCTCATGAGCAAAAAAAACAACA
TCTATCTCATAAAAAAATTGAGTAATTTAACTAAGAACATTGATGTATGC
TTATTAATAGTGATTCTTATAGATAAACATGCGTTTTTTGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTT
TTTTAGCCGTTTTTTTGGCCCAAATTTGCCCAAAAATTTTTTTTTTCGAA
AATCGGGCTCCGTCACATTCGAGAGTTTATAGTTACACATCTTTGTGCGA
AAAAAAAAAAAAAAACTAATGAGCCAATCACGAGGAAAGCTAATAACGAA
CGAACGAACAGACGAACGGACAAAGGTTAATTTATAGCACCTCCACCCCA
CCGGGGTAGGTCCAAAAAGTAACTCACTTCTATTCTATTTAACAAGTGAG
AAAAGATGGATTGTGAATTACATTTTCACACGCATGTGATTTATATCTAA
TTTCTACAGTGAAACCTGATCTTCAAATTTTCGTTGAATTTCGCAACTGT
GGAAATAATCGGTCATCCTTCATCGCTCTGTGCTACTGTAGGATGGCTAA
GCTTTCTGGCACATTTCTGGGACACTCCACCATTTAATTTTTTCCTGGCA
TACCGGATTGTGATTGTGTTTGGACAATATACTAGATCCTTAGAACTGAT
CACCTAAAAAATTGAAGTTACGTTTTTATTTACCTATATAGGTAATTAAC
CATAATCCCGGTCGTTTTTCGTTGTAAAGTGTGCGATAGGAAAGATTGGC
TATCTATCGATATTATTGTTTATCAGAAAGCAAGAAAAAAACAAGAAAAA
TGAAAAATATGCTTTTTTCTTTTTCATTCTTATTTCTTTCGCCAATCCCG
AAAAAACGAGGGAGGGACGCAATCTGGCGAGATTCTATAACCCAAACATT
CAACATATTGAAGATTTTCCCGACCTTCAGAGCCCAGCGTGTCAGATGAA
AATTTCTGCGTGGGTGTCAGGTAAACCTGAAGCTGCCTATTTAGACAGGA
GACCCGTCGTGTGTTTTTTTATAATTTGATGTACACAAGACGGGTTCGAG
CTGTGAGTCCAATATTCGACTCACATTTTTTACAGTGGGAAATTTGAATT
TAGCGCTTTCCTCACTTACTAAAATAAAAACCAAATTTCGAAAGTTGCGC
TTTCTCTAAGAAAGTGTGACCAGTAAAAGAATAACAAAATTTGATTGGCT
ATGTTTTCAACCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTGATTGGCTATGTTTTCAACCGTTATTAGGATCTGAGAAA
TTCAAACTCTCAGCCCGTACCATGCTATACATTTCGCCATCAGTTTATCA
AAGAAGAAATCATTGCAGGGATTCCCAGGCTACTGCCTATTAAGCCCCTA
AGACGGCAAAATCGTCAAACAATGTTCATTAATGGCTTTGACTTGGCGTG
ACGTACATAAAACGTTAAATTAACATTGAAAGAACGTTGTTTGTCAAGCC
TGGGCCGGAGGGGGGATTTAAAAAAATTGTGCAGCAAGGGGGGTAGCTCT
AGTTTAAACGGCCCACTTTTCGCCCTGCCTATTCTAATTGCGAATTGAAG
TAGACTGATAGTGTTGGCTGTCTAAAGTCAATGCATTGCCCTCTTTTGAC
GCCAATGCGATGTCTTCTTTCAATCATTTCAAAGCAAAGATTTTAACTAC
CAATTTTGCGGCTCCCACTTCTCGCCTACTCAAACAATTAAAATAGGCAG
GGCAGAAAGTCGGCCGTCTAAACTAGAGCTTACTACCACCAAGATCTTCA
CTAGGTCACTTACCTTGAGCCCACTCCCCCCTCCTCAGAGGTCTGGCCAA
TAAGTCTTAGTTTACACGAAGATTGTTATCATCAGACAAAACTTTCAGAA
GTATGGGAAAAATAGGAAAAGATCGATTACCTCAGATTATCATTTCGAAA
AACCACAAAATTAAAGAGAAAGATTTCTTGGTATACTTTTACAGAAGTTA
ATTGGAGTCAGTACGTTAAATTTCCTCGTTTACTCACTTTCTCAGACTGA
TCGATTGATTCTTGATATCTGAGGCTAAAAACAAATCAAGGTCAAATTTA
TCATTTAACGCATGTCTTACACTTTCCTTATAAACCTTTTCATGATTTAC
GTCACGAATATCACTTGCCTCGTATTCAAACAATTACCATGGTGATCATG
TCCCTTGAGACATTAAATTATTTTTTTATGAATAGAAAGTAGTTTTAATA
AAATCCGCTGGGAGTTAATCACCATGGCAATAAATTCAAAAGGAGGCAAG
TGAAGCTCTTAACGTAATTTATGAAAAGGTCTATATAGCATTTTTAAACA
AAATAATAACCTCCCTCCCCCCTGCACCGCACAAACACGAATTTAGAGAA
CCCTTTCTGTAACATAAGGAGTGTGCCAGCAACAAAAGCTATCTTTTTGA
AATTTCGAAACCGTTAAATTTAACATTAACATAAACTGCAAATCAAGCTT
AAAAAAAAGGTCTAACTTCTAACGGAAGTTGAAGTACATATCAATGTTGT
GTTCGTTGGAAAGGTATTTTCAAGTTAGTAAATGCTGGTACAAAACTGAA
AGAAATTCTTTAGAACACTTTATTCTTTCGTAAAAAAACAGGAAATCTTA
GCAGAGGCCTCCTCCTTTATTTTTCGTCAATTTCAGGCTAGATAGATAGA
TAGAGTCGATATTTTACGTGGATAGCCTAGTAATCTAGGACTTTTAGAGA
GTCTTTCGATTGTTTTCACGAGGTCCACGGCCAGCCGGCTCGGCTACCTA
TGAACTGAACGGAATATTGAAAGGAGCGGGGATTCGAACCACGAACCCCT
GGTTTAAGACGCTGACGCCTTTGACCACTTGACTATCGCTCCTTAGGGCG
TTCATGGGCGTACCAGTTATTCAATGAATAAACCTCCTAAAATTTGAAAT
AAGATTGATATTGAAACGACTGTCTTAATGAGCAAGCGAAAATATTGTTT
ATTTGTAAATTTTTAAAGAGGGTGATAACTATCACAATTTAAGATTAGCA
AGTCATTAAGAAGTTAATTTGCACTGTAAATATTTTCCGGTCGCACTAAT
GACCGCTATAATTGTGAGCAATCAAGGTATTAGCGTAAATGCTTGCCAAA
AAAAGTAATTGATCATTATATTTATTTCATACCAAAAAAAGTTTATTCGA
AAGCTCGAGTAGAATCCCCTATTATACGATTTGAAGCCATTTATTCCCTA
ATTAGCTGAACGGTTCATGCGGATTCCATACTAATGCTGGATTGTAAGTA
TTGCGGTAAATGCAAGAATTTAGAAAATATATCTAATATATCTAGAGAAA
AACAGACCCATCGATGCTCACTGATCGAACAGAAATATTTAAATATATCT
ACTGAGAACCGAGTGCATGTTTTTTTTTATTATAAGCATAACACTTATAA
GCATAAAGAAAATAATAAAGAACTGTTGATGAAGGCCAGAACCCACCTTT
TCAAAAGAAAAAAATGAAGAATATGAAGGCTCAGATTTGCAGATTTCCTA
AGCATAACATAAGCATGAGCCAGCCTGAAATATTTTTCAAGTCGTCAAAG
GATAAAACGCATAAGTTCTAGACTGGATTCATTTATAATTCGATGTAATA
TTTAGCTTATACACTCTTTTATTATAAATATACGGGAAAATCGGGTATTG
CTCAGTATGCTATTTATATGCTTGGACTTGGACAAAATTTATAAGTCGGA
ACATTGATTCGGCTCAAAAAAAATACAATTTCTTTGTAATTTGGCGCCGC
AGGCGAATATCGCTGGTCTAAGAAAACTCAAACAGCTTTAAAAGAAACCC
TAAAAAGGTCAGCGTTTTAGAAAAGCTGCACAAGTTTTTTTTGCATTTCA
GCTTGGAGGTATGCTTAGCATTATGCTTATTTTTTACAGAGTTTGAGCCT
AAGTATGCTTGCAAACGTTATGATTATAAAAAAGAGTGTATTCAGTTTGT
GCTACTGCTTTACCCTACCATCATTTAAATTTAGTCGTCTAGCATGTAAG
ACTCCCGATAGACTAGCTTGAGTTTCATGTTTCATACCTAACGAAAGCTT
AATTAGATTCTTTTGTTTAAAGAAATGATGAAATAATTATCGAATAATTA
GATGTATATTTATGGAAGTGCATTTTTAAATATTGCTTTTTAATCGCTTC
AAACGGCAGACAACCACAGCGCCTTCAATCTACAATGATACAACACAAAT
ATTATGTTACATAAGTTATTTCATTTACTTAGTTATCTGATAGTCCGATG
GTGGAGTGCATGGCCGTCAACGCTAAAAATTTCCCGACCTTCAGAGCTTT
ACCGTGTCGGGAGAAAATTTTAAATTTTCAGCCAAAAAGCAAAAATTAGC
TGAATTTTTGTTCCTATCTTGTATGAGGAATGGCAAAAACAACATTCATC
GATTTTAACCCTTTAAGTTCCACGGTCATTTTTTCTAAATTTTCGAAAGA
AAATCGCTAGTTCAAACTTTAAAGGCTTATGTCTCCGGATCTAGAAGGAG
TTAAAAGCTTGTTCATAGCTCGTTGGATAGCTTAGAGTCTCCTCTTTTTT
TAGGCGCCTTCGGCGCCGCCTGATTTAGGAAGGGCGGGATAGGTGGCGGC
TAAAAGGGGAGGGAGTGCCCAGTGGTAAAATTTCAAATTAATTCGCGGGA
GGACAGAATCAAGTAAAGCAGGGACAAATTTGGAGGTTCTTGGATCACTC
GTTGACCAAAAATGGTCAAATAACGGTCAAAATCTGGAAAAAGTGGATTT
TTGTCAAATTTTTGCATTTTTTTTTACTTTTTGGCTTAATATCTCGCTGG
AAAGACTCACTTTTGATTGTTTTTTTTTTGCTTGACCATGAAGCCCAATC
CAATTCCTACGAGTTAGACCAAAAATGACGATTTCTAACTCAAACTGGGC
ATTACAGGAGGGCTTTGCCCTCTGATATATACGACATTGGCACTTAAAGA
GTTAAAGATGTTTTGTATGTCATAGCAGGGGACAAAACCTTATGATCCGT
AGCATCTTTCGGTTGGATTCAACCACATGTGTTCGACAGAAGATAGGATT
TTGAAACTTCATCCATTTTAAAGAGGCTCTGAATTCGAAAGATCTATTTT
TGAGATTTACATAAATATTAGCTCAGGGCCCACGCCATTAAATTGAAAAT
GGGGGGGGGCAATGGATATAGAGTCTAAGGAGGCGCGCAACTAAAAAGAT
TTTAATTTGCAAAAAAGTGGGAGCGTGGCTTCTATCAAGAGGACCGGCCC
CGGAGGGGGGGTACTGGGTTTGCGAGGTGACGGTTATGTCCGAGCCGAAA
ATCGAAAATCGACCCTTTGAGAGACAAAAGTTTGGTGATTTTGGGACCCT
TTGAGAGACTTTTTCCAAAATTGTGGTCCATTTTTTCCAAACTTTGGTTT
GATTGTTACCAAATTTTGGTCAAAATTTTTGGAATACGTGACCCTTTGAG
AGAGAAATTTTTGATTTTCGTGATTTTGGGACCCTTTCAGAGACTAACTT
TTGAATTTGTACCCCTTTGAGAGACTTTTGAGGAATGAGAAAAGGTACCC
TTATGGTTCGCACATACCCGGCACCTATTTTGCCTAAGTACCCCCCCCCC
CGGGGGCCGGCTTCGATTGCTTCCCAATGATGTCAAATTTATGAGTTGGA
GACATTATACTACAGTTCAGATATCTAACAACATTCAGTTTGCGTAAAAT
CGAATCCAAACTCCTTTATAGACAACTGAGTTGCGTCGTAACTTCCGTTA
AAATGGGAATGAAACATTCGATTTCTGTAGACAAATTCGAACGTTTGCTT
CCATAATGATAGTTTCATTTTTGGTAAAATCTAAAATACCTCTATACACA
TTTGACACCGACGGCCGTATGAATAAAGGTCCTCTCAGACCTAGATCGAA
GAATGATGACTATGATAAGTAGTCTTAGGACATTTAAGTACTAATACAAA
AACAATCTTCAGTTTAAAACTCAGTATTTTCACCTGAGGGTTGTTTGAAA
CTGTCAGTATTGATAAAATAATTTTCATTGCTTCAACTATCACGCTTCTG
ATTTCGGTTGGTTAAGCACTCTATTGATGAATAAAACTTTAACAAAATAA
GTACTAATACACAAATACTTTAACATTTCTATTTCTTTTATTTTTCAGCA
ATGAAAATGCTTCATCAGCCAATCAGAATCACTCTCTTTATAATCTTCAC
AATGAAGGTAGGAGGTGCACCACGTGCTCAAAAGAATGTCCAAAACACCC
GAGAATATAACTATGACACATGCAAGGGCGTTATTGAAGATTACCACCCT
TTTATATTTGGCGGAGGGTGTCCGGGATCAACAATTGTTAAGTATTGGAT
ATGTCCGAATTATTGTTACCAAGATTCTTTTGATGTTGAAAAGAAGATGA
TGGTTGATACACTACACCGTTGTGTACCAGACACTTCGGTACCGGTGAAA
ACGATTTGTAATGGTTCAGTTGTGTTTGAATATCTGAAAGTTCTTACATG
CAAATGTACAGTTTACGACCGAAACAAGTTTTATGGCTGATTGATTGATG
AAAAACTAATTACCATTGACACAACAACTAATAAAAATATGCAAGAATTT
ATTTGCTTCGAGGACATTGAATTTTGAGGGTTAAATACTGGTGGAAGAAC
TTTAGAACCTTGGAAGTTTAGCATTAAC

Coding sequence (CDS) from alignment at sc0000059:727434..746911-

>TCONS_00005787 ID=TCONS_00005787|Name=TCONS_00005787|organism=Clytia hemisphaerica|type=CDS|length=390bp|location=Sequence derived from alignment at sc0000059:727434..746911- (Clytia hemisphaerica)
ATGAAAATGCTTCATCAGCCAATCAGAATCACTCTCTTTATAATCTTCAC
AATGAAGGTAGGAGGTGCACCACGTGCTCAAAAGAATGTCCAAAACACCC
GAGAATATAACTATGACACATGCAAGGGCGTTATTGAAGATTACCACCCT
TTTATATTTGGCGGAGGGTGTCCGGGATCAACAATTGTTAAGTATTGGAT
ATGTCCGAATTATTGTTACCAAGATTCTTTTGATGTTGAAAAGAAGATGA
TGGTTGATACACTACACCGTTGTGTACCAGACACTTCGGTACCGGTGAAA
ACGATTTGTAATGGTTCAGTTGTGTTTGAATATCTGAAAGTTCTTACATG
CAAATGTACAGTTTACGACCGAAACAAGTTTTATGGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003285XLOC_003285Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005787-proteinTCONS_00005787-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005787-exon-sc0000059-1575043694:746828..746911TCONS_00005787-exon-sc0000059-1575043694:746828..746911Clytia hemisphaericaexon
TCONS_00005787-exon-sc0000059-1575043694:727434..727963TCONS_00005787-exon-sc0000059-1575043694:727434..727963Clytia hemisphaericaexon
TCONS_00005787-exon-sc0000059-1510915933:746828..746911TCONS_00005787-exon-sc0000059-1510915933:746828..746911Clytia hemisphaericaexon
TCONS_00005787-exon-sc0000059-1510915933:727434..727963TCONS_00005787-exon-sc0000059-1510915933:727434..727963Clytia hemisphaericaexon
TCONS_00005787-exon-sc0000059-1491911889:746828..746911TCONS_00005787-exon-sc0000059-1491911889:746828..746911Clytia hemisphaericaexon
TCONS_00005787-exon-sc0000059-1491911889:727434..727963TCONS_00005787-exon-sc0000059-1491911889:727434..727963Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:727434..746911 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.09335	0.225246	0.527181	0	0.0914359	0	0	29.8872	15.1863	30.3425	52.0461	16.3086	28.1742	0	0.194887	0	0	0	0	0.0940516	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005787 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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