TCONS_00045805 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045805
Unique NameTCONS_00045805
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2353

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045805 ID=TCONS_00045805|Name=TCONS_00045805|organism=Clytia hemisphaerica|type=transcript|length=2353bp
aaagaaaaacagaaataaCTAAAGACAAAACCTTCAAAATTGCTCCTGAC
ATTGGTACTGCCAacattattttagaaaaaagaataattattattttaaa
gaatCTTATAATTATTGTATTTAGatgaattttgattttgtcaATATCGA
GTTTCTATGTATTTTGNAATCTTATAATTATTGTATTTAGatgaattttg
attttgtcaATATAGAGTTTCtatgtattttttgattttgaggtTGTAAA
TAATGTTCTATTTGAAAGACTTAGTTTTTAATAaggtaattcttttttaa
tattttaaatgaatttggATTACTTGATGTTGCAGTATGACTGCCATGGA
TAACAAATGGGGGCCAAGTTCAAGACTTGGATTATTGACAAATCATAGAC
CTGGGCAGCTAGATAAAAGACATACATACCATACTGGTTTAAGTAAAGCT
TTTATTGACAATAGTAACAAACAAAGCTCAACTCGCAAACCATTGAAAGC
TGATCACAGCATTAACCTGGGTAATGGTTCAAAATCTAATGGATCAAGGT
TTACTACAACTTATAGTTctgccttcaaaaggcttgatCGTGAAAAATCG
AAATCCGTTTCAAATATTAGTAGAACCCAAAAGCCTACAAATGTTGATCG
GGCAACTAGAAACTATGATATATTTGGTGGTGATTTGAGTCCACGGGCGA
AAGGGGAATTTTTATTGAGACGAAGTAGAGAAAAATTGGACAAATTAAAC
ACAAACATTGTTAATGGGATAAATGCTACTTTTCCTCGCAGATTACCACC
CCAACCTGTTACATCGCCAACTCAACCAAAGTCAATACTTAAAGGAACTG
AGCAAAAAGCAAAGCAGAAAGTAGTTAGAAGTAGTAGTTTAAACCGTGGT
GTAATAAAAAGAACTCCAGTACTGAGTCCTGTTAGGGCAAACAACGATAG
TCCCCTACCTGGAATTATACGTTCAAGACGACATTCTATTGGCTCAACAG
CATCTCTTGAAAGGTCCCTCTCAAAGATTTCATTGAAGGAACCAGCTGAA
GTAGCTTCTAGCTTAATGCCTGAATATTCTAAgGGCTCAAGAATCAGTAG
TTGTACGTCCGTGAGACGAGCTAATTCCAAGTTAGGTGTATGTGGATTAG
AAAATCTTGGAAACACAtgCTTTATGAACTCCATCTTGCAGTGTTTGAGT
AAAGATAGGACATTGAGAGAATATTTTTGTGATCGAAAATACAAGAAGGA
CTGCAAAGGTGCTTGTAGATTGACTAATGCATTTGGTGAATTTATGGATA
ATATTTGGTCGAAAAGTGAACCTAGTTATATTTCACCGCGCAGTGTCAAA
TTAGAAGTACAAAAACTTGCACCAAAATTTGTCGGGAACCATCAACACGA
CTCTCAAGAATTTTTGAGGTACCTGATAGAAGGTGTGCACGATGAATTGA
ATGTGGTCAAAACCAAACCTACTTATTCTTATGACGACTTAGATGATATG
AGGGACGACGAGAAAGCTCGAGTAGTCTGGGAACGATATTTGTCACGTGA
ATCGAGCCTCATACAAGATTTGTTTGTTGGTCAGCTACGAAGTACCTTAA
CATGTTCACAATGTGGTCATGCGTCAGTGACTTTCGATCCGTTCTGGGAT
TTGTCTCTCCCCATTCCTATCAAAAGAGGTGATGTGGCAGATATTGCAGA
atgttttcaaactttcactcaAGAAGAAATATTAGACGGTGCAGAAAAAC
CGACATGCGAAAAATGCAAGAAACGCCGAAAGTGCaccaaaaagttttta
atcgaaCGATGTCCGAAAGTTCTGGTTATTCATTTGAAACGATTCGCCGG
ACAACGCTATCGGACAAAGTTATCAACTCATGTCATTTTCCCAACGGAAT
TAGACATCAAACAATATACAGTTGCTAAAGAGAGTAGGAGGTATCAATTA
TTTGGTGTTTCCAATCACATCGGCGGAACAGCAGGCGGACACTATACTGC
ATACTGTAAACATCCGGACAGTGGTAAATGGAACCTTTATAATGACACCA
GGGTCAGTCCTGCCACACCTTCAAGCGTCAACACTGCCGGAGCATATGTT
CTCTTTTATGAATTAATGTAATATAATTGGAATCATTTCTGTCATTACTT
ATAAATACTAATTaatatatttattattattatcaatcCAACTAAAAAcg
agaattttaagaaaacttttattatatcaCCATACCATACCGAATGTGTA
CATTTTTACTATCATCAAAATTGTTATATTGTTGCTTTATaaatattatg
aaaaataaaaaaaacttttatatcCTTTTACAATACAAAATACATTTTCT
CTG
Run BLAST on NCBI

transcript from alignment at scaffold_101:128829..137400+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045805 ID=TCONS_00045805|Name=TCONS_00045805|organism=Clytia hemisphaerica|type=transcript|length=8572bp|location=Sequence derived from alignment at scaffold_101:128829..137400+ (Clytia hemisphaerica)
aaagaaaaacagaaataaCTAAAGACAAAACCTTCAAAATTGCTCCTGAC
ATTGGTACTGCCAacattattttagaaaaaagaataattattattttaaa
gaatCTTATAATTATTGTATTTAGatgaattttgattttgtcaATATCGA
GTTTCTATGTATTTTGNAATCTTATAATTATTGTATTTAGatgaattttg
attttgtcaATATAGAGTTTCtatgtattttttgattttgaggtTGTAAA
TAATGTTCTATTTGAAAGACTTAGTTTTTAATAaggtaattcttttttaa
tattttaaatgaatttggATTACTTGATGTTGCAGTATGACTGCCATGGA
TAACAAATGGGGGCCAAGTTCAAGACTTGGATTATTGACAAATCATAGAC
CTGGGCAGCTAGATAAAAGACATACATACCATACTGGTTTAAGTAAAGCT
TTTATTGACAATAGTAACAAACAAAGCTCAACTCGCAAACCATTGAAAGC
TGATCACAGCATTAACCTGGGTAATGGTTCAAAATCTAATGGATCAAGGT
TTACTACAACTTATAGTTctgccttcaaaaggcttgatCGTGAAAAATCG
AAATCCGTTTCAAATATTAGTAGAACCCAAAAGCCTACAAATGTTGATCG
GGCAACTAGAAACTATGATATATTTGGTGGTGATTTGAGTCCACGGGCGA
AAGGGGAATTTTTATTGAGACGAAGTAGAGAAAAATTGGACAAATTAAAC
ACAAACATTGTTAATGGGATAAATGCTACTTTTCCTCGCAGATTACCACC
CCAACCTGTTACATCGCCAACTCAACCAAAGTCAATACTTAAAGGAACTG
AGCAAAAAGCAAAGCAGAAAGTAGTTAGAAGTAGTAGTTTAAACCGTGGT
GTAATAAAAAGAACTCCAGTACTGAGTCCTGTTAGGGCAAACAACGATAG
TCCCCTACCTGGAATTATACGTTCAAGACGACATTCTATTGGCTCAACAG
CATCTCTTGAAAGGTCCCTCTCAAAGATTTCATTGAAGGAACCAGCTGAA
GTAGCTTCTAGCTTAATGCCTGAATATTCTAAggtatgttttctttattt
tctttccagtttttttaataattgaaattgttttaaaaggtcattgttaa
aaaaagtgtgaaattATTCGCTGCTTGTTTGTGTGTTTTAATGTAAATAA
TTACCTTATTAATAATCTCTGTGTTTTTAGGGCTCAAGAATCAGTAGTTG
TACGTCCGTGAGACGAGCTAATTCCAAGTTAGGTGTATGTGGATTAGAAA
ATCTTGGAAACACAGTAAGTGAAATATCAATCATTTTGTAttgtttttac
ataattttactTTAAAGTAATTTCTTTGTCAAATAAGCTTTCAAGTGAGC
TAAGATCTGATCAGTGTTTGATTGCTATGATAGGTGTGTACACTAATGAT
TTTAAAAGGTATAAACTTTGAATTTTACCCTGCCAGAAATTCTACCATAT
TACCTGATctcttcaatttcattttagtgCTTTATGAACTCCATCTTGCA
GTGTTTGAGTAAAGATAGGACATTGAGAGAATATTTTTGTGATCGAAAAT
ACAAGAAGGACTGCAAAGGTGCTTGTAGATTGACTAATGGTAAGTGGTAG
AAGAATCTTTCCCGGATCTATAAATGCTATCTATCATCTTTTTACTCGCA
TACAGTAAGTCTCTTTACTGTTCTTTACTCAAAAGTTTGTTGAAATGGTA
AGTTTCTTTTTAGGGTTTGTCTACGGATCCTACCTATAATGAATTCAGAT
TTGCTTTTAACCTTTTTTACGATTTTGAAAGTACTCTTACGCTGACGAAG
CAGAATAAACGAAAGTTCTTCAAACTTTATGCCTTTATACGAAAGTCTTT
AGATTAAATACGTTTAAATACACCCTTTAGATTTGTTTTCTTTTGCCTTA
TAGCATTTGGTGAATTTATGGATAATATTTGGTCGAAAAGTGAACCTAGT
TATATTTCACCGCGCAGTGTCAAATTAGAAGTACAAAAACTTGCACCAAA
ATTTGTCGGGAACCAGTATGTACCTTATTTTTCTTCGTATCTTGTAAATC
CTTCTATCCTTGTGTTTTCCAACTTGTAGACTTTTAATGTATGTAAATCA
TATTTAAGAAGATTATCAAAAGTCATAGCCTTTTGTTCATCATTGTGATA
CTTCCTAGTaggttattttttttttaattctcttttatcaccaaaaAACA
GTTGGTATATATTTTACAAGTTCCTCTACTCTGCTATATATAATaaacaa
atttatattttcgtttttgattaaaaatttcatttaaaaacagaGAGTAG
CAGTAATAAGATCTCACTGAAATTGAAGAATGGGATGTCCGCTTGCCCTC
TGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNaccaaaaacaacgaaataggCGAAAAGCAGGAAG
CTGGACAAAGTGGAGTGGAGTGTAGTGATTGGAAGCTAGATTAAATTAGG
GCTTGGTCCTCAAGGTTGATTTCATTTTGTAAATCAAAAAAACCCTGTTC
CGTCATTTGCTCTGAAAATGAATGACGTTTCATATCTTTCTCTTATTTCT
TCCTTAGTCAACACGACTCTCAAGAATTTTTGAGGTACCTGATAGAAGGT
GTGCACGATGAATTGAATGTGGTCAAAACCAAACCTACTTATTCTTATGA
CGACTTAGATGATATGAGGTAAGGAAATATAAAAAGTTCTTCTCGTCTGT
AATTGCTTCTTTTGAGCGgcgctacaatcatggttgaaatacaTTGAGAA
TTcttttcaatttgggaggggttggcagacttccaagctatattctgagc
cttattggactatttctgaacttttggatcctaagGTCCTATATGTTATt
gttaagtctagcgttaaaactcagagttaaaattctacccttcgaaccta
ctttagagcacttacaaatcgattgtggttttaaaacttcctggggaatt
tccctttttcctcaaatattacgaccttgATTGCAGTCAAAGTAGGCTGC
ACGCACCCCTTTGATACGATGTAGGGggtataggggatgcgtattgTCTA
CGATATTTCTATCCCAACTTGCCCCCGtctattcttttttcttttttgat
tatgtgTCATAGCAATACAACGACTTCTTTTTTCCTTTGTtcaatgttca
tttttttctttgattggatgtgaCAAGTAAAGTAAATTTATACAACTTTT
CGTTACCCCAATGGGCATGCACGCAGCCTATAGTCAAAGTGGAGTGAATG
TCTAAGGTACTCCAAAGCACTTATTTACTGCCCAGAGTTTATCACTCATT
GTTCCCAGCAGATGAGGTTCTTCGACACCTTCCTCTCTTGACGTTCACAC
GTAGTTGATTCGGTAGGTGGGttgttacacactccttagcggattccCAC
TTCCATTGAATTCATCTGGTTTCGCTGTCGACAGAGCCGGGAAATGAAGG
AGTTAGACCACAGTTAATTCTTTCACTGTCTATAGTGAAACCTGTAGAGG
CTGAGTGCCATAACTAATATTAACTCAAACAGTTATCACCGTCTTGATTC
TAAGCTGGAATCCGAATCTAAGCTGGTTAACCGGAACATTCTagacatat
ttttttttcattcttagGGACGACGAGAAAGCTCGAGTAGTCTGGGAACG
ATATTTGTCACGTGAATCGAGCCTCATACAAGGTATGAAATACATATTAT
CATTGATATGAAactattttaaaaaaatctttaggcTCCACGTGCCTCGC
AAAACGCAATCGTTGTTGACAGATCAAaaaggctaatttcaaaattagtg
TCCAAGAaaactaaatatttttctatttggctGACCATACATTTTAAGAT
TGGCCCTCTTTCATGTAGATGGGACCTTTCTCACTATGTAAAAAAGGGTC
AATCTGAGATTTAAGGTTAGCTGAACAGACAGACATACCAAAACAAGATC
TTGGAACAGTTATGAGGAATAGGGATGATTGGAAAAGGATTGTTaatatg
atgatgatgaatagAAAATTTCTTAGTTTTCTCAGACACTAATTTTGAGG
TTTGCCCTTTTTGATTTGACAAGCGctttaaaatctaaaatatgtCATAA
TTTATGTCCAGAACCTCCTAGTACAGTGACATGTCTTAAAGGATTCTTGT
TTTATCCATTTAATTTCACCTTGTCTCTTCGCAGTAGCTCGATGTTATGA
ACAATAAATTTGTTTTGTATTGTCATTTGGGTATGACCAGTCTGAATGGG
AGATTCTCCAAAACTGCACAGTAGTAGAATCTACAAAATGGAGCACGAAA
CCGTCAGCGAGTACCATCAACCTAATTTTCGATAGTCTtttaaaataatc
aaatcaTTTTATTTCAGATTTGTTTGTTGGTCAGCTACGAAGTACCTTAA
CATGTTCACAATGTGGTCATGCGTCAGTGACTTTCGATCCGTTCTGGGAT
TTGTCTCTCCCCATTCCTATCGTAAGTGTCTCAAAGTAACTAGTTTTTTg
ccggaactaattttcacagttgtcgaaaatctaatttcacGGGAAACGAT
TCTTAGTGGATTCTTGTAGTTTAAGCCTTATTCAAAAGGACTGCTTTCAT
TTTCCAACAAATTCGCAGAATTTTGTAGAAGTTCGACATTTAAAATTGCA
TTCTACAGgttgtttttccaaaaaatgcgtaatttaatttcttttgttat
acgaTATAAAAGATATTATAAGAAATTACCTTACTTTTTCGGCAAAGGAT
TTTGAATTCTAATGCTACCGGCTTAAAAAGATTTGCACTGTACCTTTTGC
AAATCCTTACGATTCTTCAattttaattgattttgaaaCTTAATTACATG
GTAAAAATGTTTCGGTCTACGATTATATAACTAGATTTAGACAATATCCT
TAAGCTCTCTACTTTGATACACCTCTAAATTTCATCTATATTTCATTTCT
CTATCATTTTCAGAAAAGAGGTGATGTGGCAGATATTGCAGAatgttttc
aaactttcactcaAGAAGAAATATTAGACGGTGCAGAAAAACCGGTATAT
TACTACTTGGATCTTATGAATGAGCTTTCTAGATTCTACCAACCATAGTG
TTGAATTATCAAAAAACAAACGCTTAAACATAACGTTTAACAAAACGGAC
ATTGAACTTTGAgcagtcaaaaaatataactgttatGAAGTTTTGCTGTT
TTGGTCAGATGTGACAAGTGATATTTTGCTCCACTGTCAAACATTACTTG
ATTTATCTCCATGAAATGGAAGATCCAGAATCCTCGATTATATTGATTTT
GTTTTCTCGATTTCAGACATGCGAAAAATGCAAGAAACGCCGAAAGTGCa
ccaaaaagtttttaatcgaaCGATGTCCGAAAGTTCTGGTTATTCGTATC
CTTTTcaattatttcattgttttctacTGGCATTGAAGTTAAGTATTAAT
ATGAACTTTACGGCGTTACACGCTCTATAGGTTACTAACTACCGTAGCTT
CGTGTAATGtcgacataccttgtctaattccgccatagcaactatctggt
ctgcaaagtacTTGGAGggattttttaaaaagcttgCTCAGAAGGTCTTg
tttataaacattttaaagaccagatagTTTCTATGAGGaaattagacaag
gtatgtcggCATTACACGAAGTTACGGTATAATACTGAAAGTCGAATAGA
TTTAAAGTAATTTTTCGATAGCTCTCCGCTGCTAAGGCCTGGCAAAAGTT
CTTTTGGCCCATATGGAAAATATGGGTAAAAAAgtaacaatttttcaaat
tagtaTTGAACAAAAACGTTTAATGCCATCgctagagcatgaaattctgt
gCCAAAAAGATATCTAAAACTGTAAAAATTTGACGCCAATTGCATTCATG
GCAGTATTTAGATTGTTTTAAAGACCCGTAATTCTTCGTGTTTAAGCCAA
TAGTTACTCTCATTATATATTCAGTActtgatttaagattttttctttga
ctccaaaatatttcatcaaatCAAAAGATTTGAAACGATTCGCCGGACAA
CGCTATCGGACAAAGTTATCAACTCATGTCATTTTCCCAACGGAATTAGA
CATCAAACAATATACAGGTTAGTGACCTTACATATCTTTTGATATTCttg
ctaaatttttgcttgGTGGGTAAAGGACCTTTGACGAAGTCGTGAAAATA
TGTTGTGTTTTTACtggcataacgcttataagcatatatgaAGGctcata
ttttcaaatttcgtaAGCTTAACAAAAGTATATAcgccagcctgaaatat
ttcCTGAGCTGTGCAACACGCAGCTGtaaaattcttcaattttcatgtTA
TTTTTAGTTGCTAAAGAGAGTAGGAGGTATCAATTATTTGGTGTTTCCAA
TCACATCGGCGGAACAGCAGGCGGACACTATACTGCATACTGTAAACATC
CGGACAGTGGTAAATGGAACCTTTATAATGACACCAGGTAACaacattta
aacttttttttgaaccaTACAAAATACAGGAATGGGCTCTTAACTTCCGT
AcatagggggtggaggatatagtggcCGGGGAGtggtgaaaaatctacaa
aatttgccttgtccggggggttagacctgctgtccggggatcaaaagtca
caatgtccggggggtaaatttccgaaagatgttatatcctccacccccat
attcaaatttttctggaaaagtccaataACAACCTTTACACTAATTTCTC
AGTGATTACCGGTATTCCATTTAAATCTAACCTCAATAATTTCCATAGAT
TTGAAAATATACATTTTTAACGACAGTATACTTCCTGTGTTAGTTTCATG
CTTGGAAATTTGTTGTTACTTTAAATTGATATGTTTTAATAGAACCTCTC
CTACCGCAATTAACGTTGAGTCGACAAAATGGTGTATGAGATTTAAAAAT
ATCCATGTCGGTAAAAACGATGTTAGCTTTTCAGTAGCCGTTTATGAAAT
ATTCATACCACTGTTTAGCGTAGTGTTGTATAGTATAACCATTAAAGCAA
CAACCATTGACGATTGTGAAATGGCATCATGCAATGAAATATATAACTTC
AGTAACTCGTGATGCTATACATCCTTTCAAATCTTAAAGCGTGAGGGAAA
TTGGTCAGATTTAACTAGAAAGGATTGACGTCAAAATGTATAAAGAAACA
CGCATTTTGACGTAATTCCTCCCTGGTAAAATATCGATTCAATCCCTTTG
TCGTGTTTAAGGTTGAAACATAAGGTTAAAACATAACACGAGGTTTCTCC
TAAATCAAAGCCAGTCTTCGGTATTGTTCTTTACCAGAAACTTATGTCCA
GACATTACAGTTGAAAATGATACGGTTCCGAAACACTGTGTGGACATCAA
AAATTAGAAACGTCAAAGAAAGAACACGTTACAAAGGCGATGCTAAACCg
caacgtctgaacatggtcttatttgtttttaatttcgaTCTTTCCAACGA
ATTTTGCTTTCTATTTTCAGGGTCAGTCCTGCCACACCTTCAAGCGTCAA
CACTGCCGGAGCATATGTTCTCTTTTATGAATTAATGTAATATAATTGGA
ATCATTTCTGTCATTACTTATAAATACTAATTaatatatttattattatt
atcaatcCAACTAAAAAcgagaattttaagaaaacttttattatatcaCC
ATACCATACCGAATGTGTACATTTTTACTATCATCAAAATTGTTATATTG
TTGCTTTATaaatattatgaaaaataaaaaaaacttttatatcCTTTTAC
AATACAAAATACATTTTCTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029279XLOC_029279Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045805-exon-scaffold_101-1491911889:128829..129911TCONS_00045805-exon-scaffold_101-1491911889:128829..129911Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:128829..129911TCONS_00045805-exon-scaffold_101-1510915933:128829..129911Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:128829..129911TCONS_00045805-exon-scaffold_101-1575043694:128829..129911Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:130059..130142TCONS_00045805-exon-scaffold_101-1491911889:130059..130142Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:130059..130142TCONS_00045805-exon-scaffold_101-1510915933:130059..130142Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:130059..130142TCONS_00045805-exon-scaffold_101-1575043694:130059..130142Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:130356..130467TCONS_00045805-exon-scaffold_101-1491911889:130356..130467Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:130356..130467TCONS_00045805-exon-scaffold_101-1510915933:130356..130467Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:130356..130467TCONS_00045805-exon-scaffold_101-1575043694:130356..130467Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:130782..130893TCONS_00045805-exon-scaffold_101-1491911889:130782..130893Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:130782..130893TCONS_00045805-exon-scaffold_101-1510915933:130782..130893Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:130782..130893TCONS_00045805-exon-scaffold_101-1575043694:130782..130893Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:132136..132246TCONS_00045805-exon-scaffold_101-1491911889:132136..132246Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:132136..132246TCONS_00045805-exon-scaffold_101-1510915933:132136..132246Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:132136..132246TCONS_00045805-exon-scaffold_101-1575043694:132136..132246Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:133196..133260TCONS_00045805-exon-scaffold_101-1491911889:133196..133260Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:133196..133260TCONS_00045805-exon-scaffold_101-1510915933:133196..133260Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:133196..133260TCONS_00045805-exon-scaffold_101-1575043694:133196..133260Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:133946..134049TCONS_00045805-exon-scaffold_101-1491911889:133946..134049Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:133946..134049TCONS_00045805-exon-scaffold_101-1510915933:133946..134049Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:133946..134049TCONS_00045805-exon-scaffold_101-1575043694:133946..134049Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:134542..134622TCONS_00045805-exon-scaffold_101-1491911889:134542..134622Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:134542..134622TCONS_00045805-exon-scaffold_101-1510915933:134542..134622Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:134542..134622TCONS_00045805-exon-scaffold_101-1575043694:134542..134622Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:134895..134973TCONS_00045805-exon-scaffold_101-1491911889:134895..134973Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:134895..134973TCONS_00045805-exon-scaffold_101-1510915933:134895..134973Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:134895..134973TCONS_00045805-exon-scaffold_101-1575043694:134895..134973Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:135606..135695TCONS_00045805-exon-scaffold_101-1491911889:135606..135695Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:135606..135695TCONS_00045805-exon-scaffold_101-1510915933:135606..135695Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:135606..135695TCONS_00045805-exon-scaffold_101-1575043694:135606..135695Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:135936..136065TCONS_00045805-exon-scaffold_101-1491911889:135936..136065Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:135936..136065TCONS_00045805-exon-scaffold_101-1510915933:135936..136065Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:135936..136065TCONS_00045805-exon-scaffold_101-1575043694:135936..136065Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1491911889:137099..137400TCONS_00045805-exon-scaffold_101-1491911889:137099..137400Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1510915933:137099..137400TCONS_00045805-exon-scaffold_101-1510915933:137099..137400Clytia hemisphaericaexon
TCONS_00045805-exon-scaffold_101-1575043694:137099..137400TCONS_00045805-exon-scaffold_101-1575043694:137099..137400Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_101supercontigscaffold_101:128829..137400 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.40155	6.77287	4.61436	2.62932	28.2549	20.9545	11.7924	12.5922	10.6813	13.352	9.33126	8.07802	5.44798	4.90076	3.58775	5.61035	4.89354	6.38966	6.21166	6.54535	6.54117	7.07021	9.73342	10.5413	48.6134	33.3418	6.09077	7.01238	7.02077	7.48498
Blast
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BLAST of TCONS_00045805 vs. Swiss-Prot (Human)
Match: UBP2 (Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2 PE=1 SV=2)

HSP 1 Score: 312.768 bits (800), Expect = 3.173e-95
Identity = 167/339 (49.26%), Postives = 231/339 (68.14%), Query Frame = 1 
Query: 1120 ANSKLGVCGLENLGNTCFMNSILQCLSKDRTLREYFCDRKYKKDCKGACR----LTNAFGEFMDNIWSKSEPSYISPRSVKLEVQKLAPKFVGNHQHDSQEFLRYLIEGVHDELNVVKTKPTYSYXXXXXXXXXEKARVVWERYLSRESSLIQDLFVGQLRSTLTCSQCGHASVTFDPFWDLSLPIPIKRGDVADIAECFQTFTQEEILDGAXXXXXXXXXXXXXXXXXFLIERCPKVLVIHLKRFAGQRYRT-KLSTHVIFPT-ELDIKQYTVAKESRR-YQLFGVSNHIGGTAGGHYTAYCKHPDSGKWNLYNDTRVSPATPSSVNTAGAYVLFYEL 2115
            + S  G+ GL NLGNTCFMNSILQCLS  R LR+Y   R Y +D          L   F + +  IW+ S    +SP   K ++Q+ AP+FVG +Q D+QEFLR+L++G+H+E+N V  +P  + ++LD + DDEK R +W +YL RE S I DLFVGQL+S+LTC+ CG+ S  FDPFWDLSLPI  +      + +C + FT+E++LDG EKPTC +C+ R++C KKF I+R PK+LV+HLKRF+  R RT KL+T V FP  +LD++++     +   Y L+ VSNH G T GGHYTAYC+ P +G+W+ +ND+ V+P + S V T+ AY+LFYEL
Sbjct:  260 SKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYEL 598
The following BLAST results are available for this feature:
BLAST of TCONS_00045805 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP23.173e-9549.26Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sa... [more]
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