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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045806 ID=TCONS_00045806|Name=TCONS_00045806|organism=Clytia hemisphaerica|type=transcript|length=568bp
ttttgaggtTGTAAATAATGTTCTATTTGAAAGACTTAGTTTTTAATAag
gtaattcttttttaatattttaaatgaatttggATTACTTGATGTTGCAG
TATGACTGCCATGGATAACAAATGGGGGCCAAGTTCAAGACTTGGATTAT
TGACAAATCATAGACCTGGGCAGCTAGATAAAAGACATACATACCATACT
GGTTTAAGTAAAGCTTTTATTGACAATAGTAACAAACAAAGCTCAACTCG
CAAACCATTGAAAGCTGATCACAGCATTAACCTGGATTACCACCCCAACC
TGTTACATCGCCAACTCAACCAAAGTCAATACTTAAAGGAACTGAGCAAA
AAGCAAAGCAGAAAGTAGTTAGAAGTAGTAGTTTAAACCGTGGTGTAATA
AAAAGAACTCCAGTACTGAGTCCTGTTAGGGCAAACAACGATAGTCCCCT
ACCTGGAATTATACGTTCAAGACGACATTCTATTGGCTCAACAGCATCTC
TTGAAAGGTCCCTCTCAAAGATTTCATTGAAGGAACCAGCTGAAGTAGCT
TCTAGCTTAATGCCTGAA Run BLAST on NCBI transcript from alignment at scaffold_101:129064..129902+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045806 ID=TCONS_00045806|Name=TCONS_00045806|organism=Clytia hemisphaerica|type=transcript|length=839bp|location=Sequence derived from alignment at scaffold_101:129064..129902+ (Clytia hemisphaerica)
ttttgaggtTGTAAATAATGTTCTATTTGAAAGACTTAGTTTTTAATAag
gtaattcttttttaatattttaaatgaatttggATTACTTGATGTTGCAG
TATGACTGCCATGGATAACAAATGGGGGCCAAGTTCAAGACTTGGATTAT
TGACAAATCATAGACCTGGGCAGCTAGATAAAAGACATACATACCATACT
GGTTTAAGTAAAGCTTTTATTGACAATAGTAACAAACAAAGCTCAACTCG
CAAACCATTGAAAGCTGATCACAGCATTAACCTGGGTAATGGTTCAAAAT
CTAATGGATCAAGGTTTACTACAACTTATAGTTctgccttcaaaaggctt
gatCGTGAAAAATCGAAATCCGTTTCAAATATTAGTAGAACCCAAAAGCC
TACAAATGTTGATCGGGCAACTAGAAACTATGATATATTTGGTGGTGATT
TGAGTCCACGGGCGAAAGGGGAATTTTTATTGAGACGAAGTAGAGAAAAA
TTGGACAAATTAAACACAAACATTGTTAATGGGATAAATGCTACTTTTCC
TCGCAGATTACCACCCCAACCTGTTACATCGCCAACTCAACCAAAGTCAA
TACTTAAAGGAACTGAGCAAAAAGCAAAGCAGAAAGTAGTTAGAAGTAGT
AGTTTAAACCGTGGTGTAATAAAAAGAACTCCAGTACTGAGTCCTGTTAG
GGCAAACAACGATAGTCCCCTACCTGGAATTATACGTTCAAGACGACATT
CTATTGGCTCAACAGCATCTCTTGAAAGGTCCCTCTCAAAGATTTCATTG
AAGGAACCAGCTGAAGTAGCTTCTAGCTTAATGCCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045806-exon-scaffold_101-1491911889:129064..129348 | TCONS_00045806-exon-scaffold_101-1491911889:129064..129348 | Clytia hemisphaerica | exon |
| TCONS_00045806-exon-scaffold_101-1510915933:129064..129348 | TCONS_00045806-exon-scaffold_101-1510915933:129064..129348 | Clytia hemisphaerica | exon |
| TCONS_00045806-exon-scaffold_101-1575043694:129064..129348 | TCONS_00045806-exon-scaffold_101-1575043694:129064..129348 | Clytia hemisphaerica | exon |
| TCONS_00045806-exon-scaffold_101-1491911889:129620..129902 | TCONS_00045806-exon-scaffold_101-1491911889:129620..129902 | Clytia hemisphaerica | exon |
| TCONS_00045806-exon-scaffold_101-1510915933:129620..129902 | TCONS_00045806-exon-scaffold_101-1510915933:129620..129902 | Clytia hemisphaerica | exon |
| TCONS_00045806-exon-scaffold_101-1575043694:129620..129902 | TCONS_00045806-exon-scaffold_101-1575043694:129620..129902 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_101 | supercontig | scaffold_101:129064..129902 + |
Blast
The following BLAST results are available for this feature:
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