|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045816 ID=TCONS_00045816|Name=TCONS_00045816|organism=Clytia hemisphaerica|type=transcript|length=924bp
GTCAGGTTTAGTAAGCTTAGGTTCTGCGATCGGGTTTTCAACTGGAATCA
TAACTGTTTCATTACTAACAATATCGATGTCTAATAGCTCTGGAATGGGT
ACTTGTGGTTGTTCATCTTCATCTGGTACGATAAGTATCTCCTTTGGTAA
TGATCCCGACTCGTAGAACACTTCCTCCGTGACGCACAACAACAACTTTT
CCTTCAATTCCGATAATGGTACCTGGACCATGCCAGTCCTTGTCTGAATT
TCGTTTGTAATAGACTGTATCTCCATTATTAAACTCTTTGCTCGTTGTTG
TTCGTGTTTGAAGTGATAGCGCTGTTTTGATTCTTTTACTGGATTCAGCT
TGGATAAATGCCCTTCTAGCAGAGTGAAGAGCATTCAAATGTTCAGCAAC
AAATTCACTTGACGTTTTCGTTCGAAGGGCTGGTAACTGAGATGTTAACG
TGGACGGAAGATTTGGGTTACGGCTGAAGACTAGTTGATTAGGACTGTAT
CCCAAGTTGTTGGACAAAGCATTTTTCGCACTTACAGCCCAAACAAGTGC
ATTCTGTATGGAGCACTGAGTATCAGCAACAATTTTGTGGATCATGTTTC
CTAGAGTGGCATTATGTCTCTCGACTACCCCATTTGACCATGGTGATTCA
GCAGCTTTTGAAGCTATCGATACATCTAAAAGTTCTGCTACGTCACGAAG
CAGTTCATTGTTAAACTCTCCTCCATTGTCAACAAAGATTGATTGTGGTG
AACCGAAAATAGCAACCCAGTGTTTCAAGATTTCGTCAACTATCACCTCC
TTGTGTTTAGATTTGATGACGGATGTCCAAACTGTTTATGCAGCTTAACA
GCAATAGACTTTTTCTCCTCTTTCGACTTTGTGTTTAAATCATTTATTGT
AAGATATAACTCAATTGGTGCTTC Run BLAST on NCBI transcript from alignment at scaffold_101:52803..53726 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045816 ID=TCONS_00045816|Name=TCONS_00045816|organism=Clytia hemisphaerica|type=transcript|length=924bp|location=Sequence derived from alignment at scaffold_101:52803..53726 (Clytia hemisphaerica)
GAAGCACCAATTGAGTTATATCTTACAATAAATGATTTAAACACAAAGTC
GAAAGAGGAGAAAAAGTCTATTGCTGTTAAGCTGCATAAACAGTTTGGAC
ATCCGTCATCAAATCTAAACACAAGGAGGTGATAGTTGACGAAATCTTGA
AACACTGGGTTGCTATTTTCGGTTCACCACAATCAATCTTTGTTGACAAT
GGAGGAGAGTTTAACAATGAACTGCTTCGTGACGTAGCAGAACTTTTAGA
TGTATCGATAGCTTCAAAAGCTGCTGAATCACCATGGTCAAATGGGGTAG
TCGAGAGACATAATGCCACTCTAGGAAACATGATCCACAAAATTGTTGCT
GATACTCAGTGCTCCATACAGAATGCACTTGTTTGGGCTGTAAGTGCGAA
AAATGCTTTGTCCAACAACTTGGGATACAGTCCTAATCAACTAGTCTTCA
GCCGTAACCCAAATCTTCCGTCCACGTTAACATCTCAGTTACCAGCCCTT
CGAACGAAAACGTCAAGTGAATTTGTTGCTGAACATTTGAATGCTCTTCA
CTCTGCTAGAAGGGCATTTATCCAAGCTGAATCCAGTAAAAGAATCAAAA
CAGCGCTATCACTTCAAACACGAACAACAACGAGCAAAGAGTTTAATAAT
GGAGATACAGTCTATTACAAACGAAATTCAGACAAGGACTGGCATGGTCC
AGGTACCATTATCGGAATTGAAGGAAAAGTTGTTGTTGTGCGTCACGGAG
GAAGTGTTCTACGAGTCGGGATCATTACCAAAGGAGATACTTATCGTACC
AGATGAAGATGAACAACCACAAGTACCCATTCCAGAGCTATTAGACATCG
ATATTGTTAGTAATGAAACAGTTATGATTCCAGTTGAAAACCCGATCGCA
GAACCTAAGCTTACTAAACCTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045816-exon-scaffold_101-1491911889:52803..53726 | TCONS_00045816-exon-scaffold_101-1491911889:52803..53726 | Clytia hemisphaerica | exon |
| TCONS_00045816-exon-scaffold_101-1510915933:52803..53726 | TCONS_00045816-exon-scaffold_101-1510915933:52803..53726 | Clytia hemisphaerica | exon |
| TCONS_00045816-exon-scaffold_101-1575043694:52803..53726 | TCONS_00045816-exon-scaffold_101-1575043694:52803..53726 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_101 | supercontig | scaffold_101:52803..53726 . |
Blast
The following BLAST results are available for this feature:
|
