TCONS_00045827 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045827
Unique NameTCONS_00045827
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3504

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045827 ID=TCONS_00045827|Name=TCONS_00045827|organism=Clytia hemisphaerica|type=transcript|length=3504bp
aaaaaaatcatgattttgaCTCGTTGACTCGATTACTCAAACACGTGCTC
AAGTCGTGATCCAAATCGTTTTTTTCAACAGAATTTCTCTGGTGACAAAG
GGGGTATAAAAGAGGGGGTCTTCGCTACTATTTTATTCAAGACTTACTTA
AGAGGACAAACTTTCTTCTTTGAGTAGTTCTTAAACAACTTCTAAGGGGA
AGTTTGCCTAGTATCTTGTTTCATCTACTTGTCGTCGGAGTCACAGCATT
TTAACTAGACTGTATTTTTGTGAAGAACGAAAAATGAGTTTCGATAATAA
AGGATACCAGACTGAAGCCAAGgttGAAGAGGGCAAAACTCAAGATGAGA
AAGAAACCGATCCCTTCGCAGCAGTTGAAGATTTTCAACCTGTTGGACCA
CCATGGAACGAACTTGATGGCGCTGGCAAATTCAAACGTGTCGCAATCAC
TTTCATCAAAATAACCCTACTTCTCGGCCTTCTCTATATGTTCATCTGCT
CTTTATCATTCTTGAGCTCAGCTTTCAGGCTACTTGGTGGAAAAACTGCA
GGTGATGCGTTCACATCCGAATCTATCGTCAACAACCCAGTGGCCGGTCT
CATGATTGGTGTCTTAGCAACCGTCCTTTTGCAAAGTTCCTCAACCACGA
CCTCTATTATTGTTGCCATGGTTGCTTCTGGAATTCTGACAGTGCAAACT
GCTATTCCCATGACAATGGGTGCAAACATTGGAACGTCTGTCACCAACAC
CATTGTTGCTATCGGACAAATCTCGGACAAGAATCAATTTCGAAGAGCTT
TTGCTGGTGCCACAGTTCACGATATGTTTAATTTGCTTTGTGTGGTGATT
TTGTTGCCTTTGGAAGTTATTACAGGGTACCTTTACCATCTATCAAAAGC
CATTGTTGATACCATGGAACGTCCTGAGAACGGAGAAGAATACAAGAAAG
aattattaaagaaaataacaaaaccTTTCACCAATGTCATCATTCAATTG
GATAAGAAAGTGATCCAGAAGATCGCAGAAGGAGATGAATCAGCCATGGA
TAAAAGTTTGTTGAAAGTCTGGTGTGACAAAGGAACCACCGTTACGACTC
TAAAGAATGTCACAGACAGTTTGGGAAACGTTACTTTAAAGAACGTCACT
GAAAAAATCTACCATGAAAAATGTTCATATCTCTTCGCGGACACTGGAAT
GTCCGATACGGCCATTGGTGCCCTTATGCTGGTCATCAGTCTGTTGATTC
TCTGCATCTGTCTTGTCTTCATTGTCAAGACTTTACATTCACTCCTCAAA
GGACAAATTGCTGTCGTGATCAGGAAAACCTTTAATTCAGAATTCCCAAA
ACCATTCGGATTCTTGACGGGATACGTTGCTATCTTGGTCGGTGCTGGAT
TAACAATCCTGGTTCAATCAAGCTCCATCTTTACATCAGCTTTAACTCCA
CTTGTTGGTATGGGAATCGTTTCCTTAGACCGTATCTACCCGTTGACTCT
TGGATCCAACATCGGAACAACCGGCACTGGAATTTTGGCAGCTCTGGCAT
CATCATCAGATAAATTCCACTTAGCTTTACAAATTGCTTTGTGTCATTTA
TTCTTCAACATTTCTGGAATCATCATTTGGTATCCGATCCCTGCCATGAG
ACGTGTTCCGATTCGTGCCGCTCGTTTCCTTGGTAACACGACGGCTGAAT
ACCGTTGGTTCGCTTTGCTGTATCTCGTTGTTGTCTTTTTCCTACTTCCA
GCTTTCATCTTTGCCTTATCACTGGCTGGAATTGCAGTTTTTTTCGGTAT
CCTCGGCCCGGTTGTTGCTTTCATCATTTTTATCATTATCGTGAATGTCC
TTCAAGAAAAGAAGCCCGAAGTCCTCCCCAATGCACTTAAAGACTGGGAA
CGTGTTCCAAAACCATTACGCTCTTTGGAGCCGTACGACCGTGTCTTCTC
AAAAGTCTACAAAAAGATGGACCGCAATCGAACAAAATCAGAAACGGTGC
CCATGCAAGAAAAAATATGATCTGGCTACCAGGTAAGATAAATTGTGGTA
AGATCAATTATCAACTTGCtaaattattatattttgcaaatGAATGAAAG
AGCTCTTCTTTGAAAGCCTCTCAAACAGGTATAGTTGAACCTCGTGTTTC
GTTTTAGTGGGTTTTACAGCTCCCTTAGCCTTTTGAACAACAACTGTTTG
GGCTGCAAGGTTAGAGCTACCACTTTTTTCAAACATCATAATTGCCATTT
AGTTCAAGAAAGATTAGCAAAATTGGGCATCCTcgttttttgtgaatttt
ctaTGCTAACTGATACCCCCAGATAATGTTCTCTGATGTACATCAGTCTA
ACATAAAGCCTAAGGGACGAGGCTGCAATATCATTACAATATCTTTTCTT
TTGTCTGTACTATCAAACAGTATCCAATTTTAGCTAGTCTTAAACTTTCT
GAGGAAATAAGACACCACGACTGCTCCAAGGATTTTTAGTTCAAACCCTT
TATACACTACTAGTCCCCATTATTTGTTAAGGTATATATTGTAGTATGTA
AGCTATCAAAAacttatttaaaatattttgtaagTGAAATTTTAATCTGA
AATTTCCTAACTCGagtcataatttttgaaaaatgattgctTCAAAATAT
TGAGCTGAATTTGTCAagtaacttgaaattttgcaagaccaaaataaatt
tttttgtataaTACATTCTGTTTATAAATAGGATTTATAACTCTTTACtt
attataaaattttatttttgaaaaagctaGAAAAATTAGATGACTTGCAT
CAGCCGTTGATCTGTTACAAAATTCATCCATTTTTAAGTGTACACTCTTT
CTTATGGGAAAACCACTCTCATGGAAATTAGTCTGATGATACTGGTATGG
TTTCTACACAGTAACAAATACAGAGGGCACACTCGAGTTGAATGGACTTT
TAATGAGTagcttttcatttcaaaataagAGATCTTTCACGTTTCATACC
atcgttttttataagtttcccatttccgcacaagtattcttgtcactttt
ccgaaatctttccgctatttttcctgggataaccggcatgagattggaaa
gaATTCGTTTCTAAAGGTActgaaaatcttgtgtttactacCGAAACTGt
ctaactttccgaagcttattttttgtctttttccgACAGAAAAGTGTCAC
CTTAGTGTGGAAACGGGAAACTTATTAAAAACGACGGCATCATATTATGC
GTAGATAATGCGGAACGAACTTTGTATTAGGTCCACATTTATACCGTAAA
CCATACGGTTTAAAATACTGATGttaattttgttaatatttttatatttt
attggtATTAAAAACTTGTTTATATCTATCCAAAGTATAGGGTGAAAATT
TTCTAtaagttttgtaaaaaaaaaaatagtttaggaaaaaataactgaaa
aaagataataaatacaacaaaattagataaaaatgtCATGTTATTTCATT
ACCC
Run BLAST on NCBI

transcript from alignment at scaffold_102:77854..89828+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045827 ID=TCONS_00045827|Name=TCONS_00045827|organism=Clytia hemisphaerica|type=transcript|length=11975bp|location=Sequence derived from alignment at scaffold_102:77854..89828+ (Clytia hemisphaerica)
aaaaaaatcatgattttgaCTCGTTGACTCGATTACTCAAACACGTGCTC
AAGTCGTGATCCAAATCGTTTTTTTCAACAGAATTTCTCTGGTGACAAAG
GGGGTATAAAAGAGGGGGTCTTCGCTACTATTTTATTCAAGACTTACTTA
AGAGGACAAACTTTCTTCTTTGAGTAGTTCTTAAACAACTTCTAAGGGGA
AGTTTGCCTAGTATCTTGTTTCATCTACTTGTCGTCGGAGTCACAGCATT
TTAACTAGACTGTATTTTTGTGAAGAACGAAAAATGAGTTTCGATAATAA
AGGATACCAGACTGAAGCCAAGGTTTGTCccgtttttgtgttttttttaa
tcatttcattttctgattttattttaatccttttaattaaaattttccat
TCACAAATTTTTTGAACCAAATAGATTCAAAGTGGGTGTTTTAAGATGAT
GGTTAGACCCAGGCTCATGTCCTTTTAGATACAGTGACACACCCCTTTTT
CACGTACCCCTCCTACCCTTTTTTACCTACTAGTTCACTATTAAtccatt
ttttctgatttttaattcacttttataaatttttgattgattttacacac
ctctgtctcacagacccggtggaaatTTTCCCACAGTGGAGACATGGAAA
TGTCTATAGAAATTCCAATGGGGGATAAACATCCTATTGTTCCAAGCTAA
AAAAAATCATGTGGAATGGATTTAGTATGCAATTTCTTTCCATTGAAATT
GCATGcagataaaatcaaaattaatttttcagtgaAGCTGAATTTGTTGG
ATATCTTTCgctggggacgaaattttcgcAAATATTTTTAAGGGGTAGCt
gtcctaccgggtctgtgacacgggggtgtTATTACAAATACACGCtgctt
tttttattagaagatctaaatttttgaagccttccgatgttcttaacttt
ttgagttttaagcctaaaaatgttctaaaattgttcttattttccccatt
tttcatatatttttgtccattttcttaagaaatttgctgttttaaagtcc
acaaagccttaactTAAAtgatcttaacttgttcttaacatttttgccat
cgaggccttatgttcttatatagttttttcttataaacaaacGTGTAGTG
TATCTTAAGAGCCATGTTACAAGCAcgaaattttgtttgtttgctcTAGA
AGGGATTTGAGTGTATGTGTTATCTTGTTGGACGAAGGGTAAATAAAATT
GACCAATGGGACTCTTACTCAattcaagaatatttttcatCCTACCATAA
TTGGCGTCAAGAATAAGGAATTTGCTGATACATAGAAACCTCTGTCAAGC
CAAATTTCACCTACGTGAAATAATACAAACCTATTCCATGTGTCAACAAG
CTATCATATTGGCGTCAAAAACAAGGAATTTACTGATACCTCTGCTAATA
CCCACGCAAAAGTAATATAATACAAACATATTCCATGTGTCAAAAACTGT
AAACAAAATATTAGATTGTCGGCACTTATTCAACATTGGCGGCTTTTTAG
ATCAAATTTCTTGGTTCTCAGGAAAAATGCCCTTCAAATGCATTTCACGT
GTTAtcaagcctttggatgttcttaaactttttcagttttaagcctaaaa
atgttcttagaatgttcttaatttcaccattttgtgagtatttttctgca
atttcctaagaaattgcgtgttttagagcccatgaagccttaaaatgttc
ttagcttgttcttaacattttggccatcgaagccttattcttaaataatt
tgttcttataaaaaacgtgtaaccaaTGATTTcgctttgttttttcactt
attTTATCCCTTTATCAAGTGTTAAGAGAAAACAAAGCAACGCTTTTATG
CGCTGACAGAGTAtcgaatcagaaaaaaaattgtcaccCTGTCTCAATTT
GTAATATTAGAATCGTGAAACCCAAAAAAAGAAACCCAACAGTATTTTGA
TAAGTGTCACTATTCAGTGACAGCCCATTTTGTgagaaagtatttttttg
tattcGTTCCCACGCTCCCAGATGAGTAAAATATTGacagagaaaaaata
ttttatcaaaattacaGATAGAGAATGTatagacaaatttgaaaaaaaat
aaccgTCGATTTTTTCACGTTCGATAATAATTAGTAATCGTGAAAGCTTT
AAAAGTTCGTCTCAAAAGTCTTAAAAGTTTCTAGGGCgacattcaaattt
caaataattttctgataatCTGTATACTTGAGTATAGCGCTAAAGCTGTa
actttcatcaattttttcattgGTTCTTGTCTTTATCGGTAAAATCACAG
AGCGGCGTTTAATAATCTAGCTCTTTGTGATGAAGGGTTACAGACTGCAA
TTTATTTCCGTGAGTCAGTAAAGCAACAATCTGGACAACAATTTTCTAGA
CACTGTTTgaagaattcatgatattcatgacgtaatgcttTCTACGGGAA
GACACCGtttttttgccagtagtggcaaatcttatacaacttttgtctag
tttaaatttgccactactggctagaTCGCGGTATTTCGTagaaaaaacat
tacgtcatgaatatcatgaattactcattgataaaaaattccttATTCCT
AAGTTTAATATTTCCGAGAAATATttggtaaaaataaattttactaATAC
CAATACTAGTGTCAAACGTTTGAATGCCAAGTATGCTTATCCAAGATACT
GACGTGTGCATAAAAAGGTATTGGGAATAAGTATTTATCAATCCTACAAG
AAATGTTCCGCAGACTATACTGCGCACAGATGGAAATCTTTTTGACAAGA
AAAGAATGACTTTCAAATTAGAAAAACctcttttttacaaatttttgggA
TATTTTGCTCTCGTTTTTTCAAACATGGATGTTAATTCGATAACTTAATT
ACACGttctatttttatttgaatatctaaaaattttgaagccttcagatg
ttcaactttttcaagtttcaagcctaaaaatgttcctaacatgttcttat
ttttgccattttgtgggtatttttgtctattttcctaagaaattggttgT
TTTAGAGTCTTCAAAGTCTTAAcatttttggccatcgaagcctttatgtt
cttatatagtttgttcttataaaaacgtgtaattaCTGTGTTCTCACCAA
CACAAAAGAGAAGGGGTTATAATGATAGAATCAACGCCCACACTTTGAAA
CTTTGAAACCTTGAAACTtcaaattgtcaaaaaaattacatGACGTTTCT
CACACATGTCTCATAAAGGGTTCCcatttaaaaataatcaaaatcttGAT
AACGAAATTATCTTATCTCGACATGAcaaatttttagctttttgttcgaG
ATCGGGTTGTCCTTTCTATGATCATAAATGCAACGTTAAACTGCGCTGAA
agtcaaaatttatttaatacacgttttttataagaagatccaaaaatttt
gaagccttcggatgttcttaactttttgagtataAGTCAAAAGATTTTCT
TAACATGTCCTTATTtaaaccattttgtgaatatttttgaccattttcca
aagaaatagcCCATAAAGCCTTGAAATGTGGAGTTTCAAATGGCGACCAg
gaccagcgaccagataaatttgggttatcgagttttttcccTTACTCTAA
CGTAGAGTGTCTCTCCTTATCATTTGAATATATCATATTTAAGAGTAaac
tcacccctgtctcatctatTTAGAGCGCCAAATGTTTAAAACGACCATTT
ctacgctcttggagcttgattatggtgtcaatttctattcttttgtatta
tcagcatcaaaataattagtggcacaaaattttttgaaattggtttgaga
agctttgtatttcacCATCAGATTGTTATTCctgtcgaaattagtcattt
tgtcagcataaagacaacagaataattgattagattcatatcttattcat
actaaaggtatctcattcagcataattaaaatattcggTGTGACAAAGTT
TACAGACATCATACTTGATGACCCtctcaatatttttgtcaaatagtgtc
actttgtcaagaaaatgctTACTTGAAAGACTGAATGACTGCTcacttca
aaggtcactttttagtattctgaggacttgatttGGACATTCtttacggt
ggagagagcagataaactcgataacccaaatttatctggtcgccagTCGT
GGTCGTTGGTCGTGTTcaccatttctggtcgatgttaaGAAACTcccctt
gaaatgttcttaatttggccaacgaagccttatgttcttatatagtttgt
tcttataaaaaaacgtgtactcagAAAATTACGGTTATAGGCTTGACTGC
TGggtaaaaacttttcttttgttacttATAAAAGGGATTTCTTTAGATTA
AAAGCCTTATCTGTAACATTTATTaaattaattcatttttgacTTATAGC
TGTCTGTTAGCGAATTTCATATGGTATATctggcgaaaataaaaaaatgt
agtgtttccggaatgtgGGTAAGGGATAAAAGCTCACATGCGGCCGggcg
aaaaagattttttaactgAAGATCATTGAAatggaactttaaagataact
tttatgttcaaagagtatatgaagtaagccctgaataataatgtatcaac
tactaacgaacaaaacttgatttgcgacggggaatatctaaccaaacaac
gtttgatagcttgaacagtcttgaaattgattttctttatggtgaaccat
atagatgaatccatagtctgcggccgggtcagaaaattctttttttttac
ccggccggtttccggaaacactacatttttttattttcgcctcttATCGA
ATTTTTTACGATTTCCATTGCATTTAACAAATAGTCCAAACTTAGATTCT
TATGTAATACcgattttctttgatgtttttaagagtgaatgcaaaatatt
ttaagtACTCTTTGACGAGTACAGTTAACCAAAGGTTTAAGTGTCTTAGA
CTAGAAGACTCGCTAAATGACGctgaaaatataagaaaatacCGGTGTTA
CTCAGGAACACATTTGAGTATCTAAAAAAGACCTTTCAATATATGACTGC
CCTTTCTTTATACTTACTGCTCCCTTaaataatattgaaaaattattttt
cgaagTCTTGACTgactgaaaaataaattccaGAGCAATACATGTGGATT
ATAACTAAATCTACCAGTCCTGTACGTGAGCGAAGGCAGTAGGGAACAGT
GGTCTTCAGTGGTTGGCGTTCTTGGTGGTCGCATGAAGAGTGGTTGGTGT
TCTTGGCTTTTGGGAGGATTTGGGTCTGAAATCCACACAAGACGACGATT
AAAGCACCGTGTTAATCTCTCTAACTCTTCTTCTAAAAACCTTAATCAAC
ATATTTCTATTATGATGAAGAATTAAAAGGGCTTgctttataaccggctg
ggattTTGTAGTTTGGTCAGAAAACTAATTTTAGGTCTCTAGAGTCGTAT
CCTGTGACGTCCGACGTCACAAGACCAACTAAATCGTTGATTTGGTTTTG
ACTCTCAGCTGAATTCATCAAATAACAATATCATTAAAGTATTactcttt
tttatcaaaaggttGAAGAGGGCAAAACTCAAGATGAGAAAGAAACCGAT
CCCTTCGCAGCAGTTGAAGATTTTCAACCTGTTGGACCACCATGGAACGG
TAAGAGGGCCTGGAATTTAACACAATTTAACCCTAAACTCTTACCTAGTC
CCTTAGTCCTTAGCAATTTTTTATtcctaaaaaagtaaaattagaaAATA
GTACAAGTACTCAATAACACGATTGTCGaaaactctttttttcaaatatc
cgCTAAGGCTTTTTATAATTCAAAATCctcaaatatttgaaaacaatgAC
TTCTTGGCTGAGAAAGAGATAACTTAGTTGACTGTAGTTGACATTTATGT
ATCTTTTTGTATCACAGAACTTGATGGCGCTGGCAAATTCAAACGTGTCG
CAATCACTTTCATCAAAATAACCCTACTTCTCGGCCTTCTCTATATGTTC
ATCTGCTCTTTATCATTCTTGAGCTCAGCTTTCAGGCTACTTGGTGGAAA
AACTGCAGGTTTGTTGAATATCTTTTAGTCTATATTCTAAACTTATATTC
TAAACTTAAAATTATAGATAAATTGCCTTGTTGAGCCTTACATCattttg
aaaaagcttttcCAAGGATGTTTGCTTGGAGGAAGGCTAATGACCTTGAT
GGTTGAGACAGAATCAAATCTTACAGtgatacaccccttctcacagaccc
actcggaacccttcccactgaaaaattggccaaaatatcatcatccccag
tggaaaattataatcGAATTCTTTCCCCAACTGGAAATAATCAAATGATA
AaatccccactgcaaaatattgtgctatttttccatcccACTAAATCTTT
TGACTAGAAGAAAtaggaattcaaatccccagccaatAGAAACATGAGAC
TATCATTCACCAtagagttttggtccgttattacCCCCTGctggctgtaa
aatcccaccgggtctatgAGACTTGAGAGTACTCCAAAAGGCAAAATGCA
AAATCAAAAGGCGAGGAGTAttcctttttcatttctttaagaAACCCATA
CTCAGTTGTCAAAGTAGATATATTTTCTATGGATAtacaccattgagttt
caagcccgaagggctagaggtcaatctctaacctttctcaggcaagaaaa
attgaagccttaaaatatgcgccgtatttttgatgacggNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naaaaccaggcgggtcgctcaaggccgcgcaactttggtaggatttgttg
gcttcaaatcctaccaaggagattgacctctagcccttcgggcttgaaac
tcatgGATATACACAATATACCCTTTGTATGATGACTATAATTCTTAATG
TCATTACCAAAAATTTACACCAAATAATTGTGTAAGTGATGAATTAATGA
TTTAATTCTATTTAGGTGATGCGTTCACATCCGAATCTATCGTCAACAAC
CCAGTGGCCGGTCTCATGATTGGTGTCTTAGCAACCGTCCTTTTGCAAAG
TTCCTCAACCACGACCTCTATTATTGTTGCCATGGTTGCTTCTGGAAGTA
AGTttgatatttaattttttttcgatattCACTGAAGTTCAACCATTATA
CCTGCAAAGTCTCGGGGGAGAATTTTTAGAAAAGTAGTTGTGATAATATA
GTGAGATCATAGCGAGATGCCTATGAAATATTCATAAATTTAATGATCAC
TAGGATGAAAAATGTCTTCTGTTTAATTTATTGGTGACTTCAGGAATTTA
CTCGTGATTTCCTAAGATTTAAGCTTCATTATAAACAAGAATAGAAATGA
CGTTTAATTTTAAGGGCGTTTGTTTCGATCTAAtgggttttattttgttt
tgagtttaaTATTGTACGTAAACTTTAAAGATCAGATTTTCCTGGCGATT
CTAATCCTTTCCGATCATACTCTTCGCTTTTCAGTTCTGACAGTGCAAAC
TGCTATTCCCATGACAATGGGTGCAAACATTGGAACGTCTGTCACCAACA
CCATTGTTGCTATCGGACAAATCTCGGACAAGAATCAATTTCGAAGAGCT
TTTGCTGGTGCCACAGTTCACGATATGTTTAATTTGCTTTGTGTGGTGAT
TTTGTTGCCTTTGGAAGTTATTACAGGTATGTAGTAGAGAAATTAAGGCT
ATTCCTTCTTACTGACATAGGAAGGAGGCACAGCTCCATGCTGCAATCAA
GGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaaagttcaaaaatagtcc
aataagactcagaatatagcctggaagtctgccaacccctcccaaattga
aatattcgattaaattaaaaagatagccaaaactcgactttctcgccaga
actttaaatcttgaaaaacgttaaaataaccaaaattctcaatattttat
gaccttgattgtgaCATGGCAGAATAAACAAAGGATTTTATCTGAAAATA
CAAAGTTGAAACTTCTTGAGATATTCTCAAGGTACCCTTACCATGACTGG
CATGCGCTCTTAAAATTGTGACATCATTTgtacttttcatttttcaactt
tcttgACATTCCCAGTGTACTTTACCATTTGAGTGGCATTTTATTTAAAT
TCTGATATAATTTACAGTATCtaatttcttaacttttttgtcATTCCCAG
GGTACCTTTACCATCTATCAAAAGCCATTGTTGATACCATGGAACGTCCT
GAGAACGGAGAAGAATACAAGAAAGaattattaaagaaaataacaaaacc
TTTCACCAATGTCATCATTCAATTGGATAAGAAAGTGATCCAGAAGATCG
CAGAAGGAGATGAATCAGCCATGGATAAAAGTTTGTTGAAAGTCTGGTGT
GACAAAGGTAAGCTGTTCAAAGATTGCAGTTGTAATTATGAACAACCTTG
AAGATTTCCTGGCAGAATTtcactaaaactttacaaaattCAATAGTCAC
AGGTTTCCCCAGTATCTAAAAGAATAAATATCTTCAATTGTATCGTCAAC
ATTTTTCtaaagattcgaattattgagggtacatgtttttttttataagc
attgcacttataagcatatctaggctcagatatggggaaaaattaagaat
atgacaagcattacttgagcctacgaaaaaaaaatttttcctaattttgg
ctttttttggctggaattttacggattttcagtatctccctaaatttatg
ctttagatttaagcatcccctcaagcatttttcagccttattaagctttc
gacctaagcatctctgagcctgttttcggatttttgtatgcttataaaaa
aaaaacatgtatctaaCTTCACTTTTCAACTGAATGGGCCAATGGTTTCG
TTCGATGAATGACAGAAGAATTTGAATTCTACAACCTCGAATTAGATAGT
AAACTGTATCAACTGTAGGTAGTGGTAGCAATTTCCATTCCATCTTCTTT
TAGGAACCACCGTTACGACTCTAAAGAATGTCACAGACAGTTTGGGAAAC
GTTACTTTAAAGAACGTCACTGAAAAAATCTACCATGAAAAATGTTCATA
TCTCTTCGCGGACACTGGAATGTCCGATACGGCCATTGGTGCCCTTATGC
TGGTCATCAGTCTGTTGATTCTCTGCATCTGTCTTGTCTTCATTGTCAAG
ACTTTACATTCACTCCTCAAAGGACAAATTGCTGTCGTGATCAGGAAAAC
CTTTAATTCAGAATTCCCAAAACCATTCGGATTCTTGACGGGATACGTTG
CTATCTTGGTCGGTGCTGGATTAACAATCCTGGTTCAATCAAGCTCCATC
TTTACATCAGCTTTAACTCCACTTGTTGGTATGGGAATCGTTTCCTTAGA
CCGTATCTACCCGTTGACTCTTGGATCCAACATCGGAACAACCGGCACTG
GAATTTTGGCAGCTCTGGCATCATCATCAGATAAATTCCACTTAGCTTTA
CAAATTGCTTTGTGTCATTTATTCTTCAACATTTCTGGAATCATCATTTG
GTATCCGATCCCTGCCATGAGACGTGTTCCGATTCGTGCCGCTCGTTTCC
TTGGTAACACGACGGCTGAATACCGTTGGTTCGCTTTGCTGTATCTCGTT
GTTGTCTTTTTCCTACTTCCAGCTTTCATCTTTGCCTTATCACTGGCTGG
AATTGCAGTTTTTTTCGGTATCCTCGGCCCGGTTGTTGCTTTCATCATTT
TTATCATTATCGTGAATGTCCTTCAAGAAAAGAAGCCCGAAGTCCTCCCC
AATGCACTTAAAGACTGGGAACGTGTTCCAAAACCATTACGCTCTTTGGA
GCCGTACGACCGTGTCTTCTCAAAAGTCTACAAAAAGATGGACCGCAATC
GAACAAAATCAGAAACGGTGCCCATGCAAGAAAAAATATGATCTGGCTAC
CAGGTAAGATAAATTGTGGTAAGATCAATTATCAACTTGCtaaattatta
tattttgcaaatGAATGAAAGAGCTCTTCTTTGAAAGCCTCTCAAACAGG
TATAGTTGAACCTCGTGTTTCGTTTTAGTGGGTTTTACAGCTCCCTTAGC
CTTTTGAACAACAACTGTTTGGGCTGCAAGGTTAGAGCTACCACTTTTTT
CAAACATCATAATTGCCATTTAGTTCAAGAAAGATTAGCAAAATTGGGCA
TCCTcgttttttgtgaattttctaTGCTAACTGATACCCCCAGATAATGT
TCTCTGATGTACATCAGTCTAACATAAAGCCTAAGGGACGAGGCTGCAAT
ATCATTACAATATCTTTTCTTTTGTCTGTACTATCAAACAGTATCCAATT
TTAGCTAGTCTTAAACTTTCTGAGGAAATAAGACACCACGACTGCTCCAA
GGATTTTTAGTTCAAACCCTTTATACACTACTAGTCCCCATTATTTGTTA
AGGTATATATTGTAGTATGTAAGCTATCAAAAacttatttaaaatatttt
gtaagTGAAATTTTAATCTGAAATTTCCTAACTCGagtcataatttttga
aaaatgattgctTCAAAATATTGAGCTGAATTTGTCAagtaacttgaaat
tttgcaagaccaaaataaatttttttgtataaTACATTCTGTTTATAAAT
AGGATTTATAACTCTTTACttattataaaattttatttttgaaaaagcta
GAAAAATTAGATGACTTGCATCAGCCGTTGATCTGTTACAAAATTCATCC
ATTTTTAAGTGTACACTCTTTCTTATGGGAAAACCACTCTCATGGAAATT
AGTCTGATGATACTGGTATGGTTTCTACACAGTAACAAATACAGAGGGCA
CACTCGAGTTGAATGGACTTTTAATGAGTagcttttcatttcaaaataag
AGATCTTTCACGTTTCATACCatcgttttttataagtttcccatttccgc
acaagtattcttgtcacttttccgaaatctttccgctatttttcctggga
taaccggcatgagattggaaagaATTCGTTTCTAAAGGTActgaaaatct
tgtgtttactacCGAAACTGtctaactttccgaagcttattttttgtctt
tttccgACAGAAAAGTGTCACCTTAGTGTGGAAACGGGAAACTTATTAAA
AACGACGGCATCATATTATGCGTAGATAATGCGGAACGAACTTTGTATTA
GGTCCACATTTATACCGTAAACCATACGGTTTAAAATACTGATGttaatt
ttgttaatatttttatattttattggtATTAAAAACTTGTTTATATCTAT
CCAAAGTATAGGGTGAAAATTTTCTAtaagttttgtaaaaaaaaaaatag
tttaggaaaaaataactgaaaaaagataataaatacaacaaaattagata
aaaatgtCATGTTATTTCATTACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029294XLOC_029294Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045827-exon-scaffold_102-1491911889:77854..78175TCONS_00045827-exon-scaffold_102-1491911889:77854..78175Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1510915933:77854..78175TCONS_00045827-exon-scaffold_102-1510915933:77854..78175Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1575043694:77854..78175TCONS_00045827-exon-scaffold_102-1575043694:77854..78175Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1491911889:83515..83602TCONS_00045827-exon-scaffold_102-1491911889:83515..83602Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1510915933:83515..83602TCONS_00045827-exon-scaffold_102-1510915933:83515..83602Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1575043694:83515..83602TCONS_00045827-exon-scaffold_102-1575043694:83515..83602Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1491911889:83871..84011TCONS_00045827-exon-scaffold_102-1491911889:83871..84011Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1510915933:83871..84011TCONS_00045827-exon-scaffold_102-1510915933:83871..84011Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1575043694:83871..84011TCONS_00045827-exon-scaffold_102-1575043694:83871..84011Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1491911889:85119..85250TCONS_00045827-exon-scaffold_102-1491911889:85119..85250Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1510915933:85119..85250TCONS_00045827-exon-scaffold_102-1510915933:85119..85250Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1575043694:85119..85250TCONS_00045827-exon-scaffold_102-1575043694:85119..85250Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1491911889:85638..85829TCONS_00045827-exon-scaffold_102-1491911889:85638..85829Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1510915933:85638..85829TCONS_00045827-exon-scaffold_102-1510915933:85638..85829Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1575043694:85638..85829TCONS_00045827-exon-scaffold_102-1575043694:85638..85829Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1491911889:86604..86810TCONS_00045827-exon-scaffold_102-1491911889:86604..86810Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1510915933:86604..86810TCONS_00045827-exon-scaffold_102-1510915933:86604..86810Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1575043694:86604..86810TCONS_00045827-exon-scaffold_102-1575043694:86604..86810Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1491911889:87407..89828TCONS_00045827-exon-scaffold_102-1491911889:87407..89828Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1510915933:87407..89828TCONS_00045827-exon-scaffold_102-1510915933:87407..89828Clytia hemisphaericaexon
TCONS_00045827-exon-scaffold_102-1575043694:87407..89828TCONS_00045827-exon-scaffold_102-1575043694:87407..89828Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:77854..89828 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	20.5128	17.8439	66.3508	74.6511	39.2779	93.4063	58.4975	18.3259	37.3476	33.5407	20.0833	16.0507	13.323	25.3104	22.987	30.4128	26.7414	30.1962	4.2488	2.20858	8.64566	10.1476	7.12522	2.05716	21.6177	28.4561
Blast
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BLAST of TCONS_00045827 vs. Swiss-Prot (Human)
Match: NPT2A (Sodium-dependent phosphate transport protein 2A OS=Homo sapiens GN=SLC34A1 PE=1 SV=1)

HSP 1 Score: 453.366 bits (1165), Expect = 2.191e-144
Identity = 273/515 (53.01%), Postives = 378/515 (73.40%), Query Frame = 2 
Query:  428 KFKRVAITFIKITLLLGLLYMFICXXXXXXXXXXXXGGKTAGDAFTSESIVNNPVAGLMIGVLATVLLQXXXXXXXIIVAMVASGILTVQTAIPMTMGANIGTSVTNTIVAIGQISDKNQFRRAFAGATVHDMFNLLCVVILLPLEVITGYLYHLSKAIVDTMERPENGEEYKKELLKKITKPFTNVIIQLDKKVIQKIAEGDESAMDKSLLKVWC--DKGTTVTTLK----NVTDSLGNVTLKNVTEKIYHEKCSYLFADTGMSDTAIGAXXXXXXXXXXXXXXXXXXKTLHSLLKGQIAVVIRKTFNSEFPKPFGFLTGYVAILVGAGLTILVQSSSIFTSALTPLVGMGIVSLDRIYPLTLGSNIGTTGTGILAALASSSDKFHLALQIALCHLFFNISGIIIWYPIPAMRRVPIRAARFLGNTTAEYRWXXXXXXXXXXXXXXXXXXXXXXXGIAVFFGILGPVVAXXXXXXXVNVLQEKKPEVLPNALKDWERVPKPLRSLEPYDRVFSK 1954
            K ++     +K+ L+L  LY+F+CSL  LSSAF+L GGK AGD F   +I++NPVAGL++G+L TVL+QSSST+TSIIV+MV+SG+L V +AIP+ MG+NIGTSVTNTIVA+ Q  D+  FRRAFAGATVHD FN L V++LLPLE  TGYL+H+++ +V +     +G     +LLK IT+PFT +IIQLD+ VI  IA GDES  + SL+++WC  D     T++     N + +LGN T+         EKC+++F DTG+ D A+G ++L  SL++LC CL+ +VK L+SLLKGQ+A VI+K  N++FP PF ++TGY A++VGA +T +VQSSS+FTSA+TPL+G+G++S++R YPLTLGSNIGTT T ILAALAS  +K   A QIALCH FFNISGI++WYP+P   R+PIR A+ LG  TA+YRWFA+LYL+V F LLP+ +F +S+AG  V  G+  P  A + F++++NVLQ + P  LP  L+ W+ +P+ + SL+P D + ++
Sbjct:   93 KLRQAGAMLLKVPLMLTFLYLFVCSLDMLSSAFQLAGGKVAGDIFKDNAILSNPVAGLVVGILVTVLVQSSSTSTSIIVSMVSSGLLEVSSAIPIIMGSNIGTSVTNTIVALMQAGDRTDFRRAFAGATVHDCFNWLSVLVLLPLEAATGYLHHITRLVVASFNI--HGGRDAPDLLKIITEPFTKLIIQLDESVITSIATGDESLRNHSLIQIWCHPDSLQAPTSMSRAEANSSQTLGNATM---------EKCNHIFVDTGLPDLAVGLILLAGSLVLLCTCLILLVKMLNSLLKGQVAKVIQKVINTDFPAPFTWVTGYFAMVVGASMTFVVQSSSVFTSAITPLIGLGVISIERAYPLTLGSNIGTTTTAILAALASPREKLSSAFQIALCHFFFNISGILLWYPVPC-TRLPIRMAKALGKRTAKYRWFAVLYLLVCFLLLPSLVFGISMAGWQVMVGVGTPFGALLAFVVLINVLQSRSPGHLPKWLQTWDFLPRWMHSLKPLDHLITR 595
The following BLAST results are available for this feature:
BLAST of TCONS_00045827 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NPT2A2.191e-14453.01Sodium-dependent phosphate transport protein 2A OS... [more]
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