TCONS_00045830 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045830
Unique NameTCONS_00045830
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3068

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045830 ID=TCONS_00045830|Name=TCONS_00045830|organism=Clytia hemisphaerica|type=transcript|length=3068bp
GCATTGTCCGCTTATTAGAAGACATACGATTCGGAAACAACGTGGATTCA
ATCGAGTAATATGGCTGTCACCACAGATCAACTTTATATCATTGCTTCAG
TCTTGGTTGTTCTAATTCTCATCCTAATcattgcatatctggtctggtAT
TTTTACTACCAAAGACGCCATGGTAAAGGATTCGAGAAAATACCTTCTTG
TGAACGAGGTCAAGGTCACCCGGTTCTTAAAACTCCAACTATTGATATAA
GTACTGTTAAATTTACTGTCCCGACTGGGCCGCCTGGTTCACGCCCCTAT
TCATGGGCGCCTGGTAATGATGATTTTGATGTTCATCGCGATGCTGGAAC
AGCAGGATCGAATAAATCGGGCGCCAGTGGTAGTTTAGGGCGTGGATCAT
CGGAACAGAATTTAGGGTTACTGAAGCCCGAACTTTATGTGACGAACGAG
GAATCCGATTACGAATTAGAAGAAGACTTACCACCAGGGAATATCGGTCG
AGTCTGGTTCTCAATCGAATATGATGCATCATCAGAAAAACTAATAGTGA
ATGTTGACCGTTTACGGAATTTACCGGGGCGCCAACAACGTTCCAGTTTA
GCATTATCCTCTACGTCTTCGTGTGATCCTTTCCTGCGGTTATATCTACT
ACCGGACGAAAAACGGTATCTTCAGTCCAAAATGAAACGTAAAACACGAA
ATCCAACATTCAAAGAAACTTTCATGTTTACAATGTCTTATTCGTTGTTA
GTTGAACGAACTTTAAGGATAACTGTATTTGACGTGGATCGATTTATGAG
ACAAACAACAATCGGACATGTTTTGTTTCCATTGGAAAACCTTGATATCA
CAACTCCAACGGATTTGTGGCGAGATGTTGAACGTTCTTCACAGATCTCA
AGTGGTGCCGGAAGGTTACAAATTGGATTGACCCACTTCCCAGATATCAA
TCGTGTGGCAGTAAACATCATAAGAGGTCAGCAAATTGGTAACGAAGATA
TAACACTTCCAGATTCTTATGTCAAAGTGACGTATTCCGTATTAAGCAAA
ACTCATAAAGTCAAGAAAACTTCCACACAAAAAGCAACCAAAGAACCATT
CTATAATCAaacatttgaattcaaaattgatCAACAGGGTATGGAAGTAG
CTTGTTTCAACTTTGAGATATTTCATTCAACATCAGGTATTGGAAAAAAT
GATAAAACGCTTGGATCATTCATAGTTGGTGGAGGTTTGTGCGCTAGAGG
TAAAGAACTTGAACATTGGACAAATATGCTTCAAAAACCACAAACTGTCG
TTAAAGAATGGCATAACTTaaaaaattaaggaaaaaatgattttttatgg
tcCTCGATTTGACTACTAGATTTAGGGGATTTCAGAGGCGTATGAAATAc
cagaaaatttttccggccgatgACGGAATACCGGAACACCGAACGATACC
AGAAACTCTAAAGCCCCCTATACTAGAAATATAATGATGATTTTTTGTGC
ACTTTCTATGTTtaagtttcttaatttttcaaaatcttttaagatttttt
tgtcacaataatttttactttttataaaaagggAAAAATGTTAAGCAATG
TGGCTGGGTTGTCATCTTAACCTTTTCAGTAACATAAATGGTGTAAAGTC
GGTTAAAGGTTTTTTAGATCCCAAaagcaaaatccaaaaaaatcattttg
actCTTTGGGTGATTTCAAAGTGAAATCGTATCTAAATCGTTCAAAATAA
TTCTCGGTGAAAGGCTCAGAAATTCAACAATATTTGTTTATCAAGGGAAC
TAGATTTGGCGAACTGCAAAAAtccccaaaaaaattaaaattgatgactg
ggtaattttttaattttggtgaatttattGCCAAATTCCTCAAAAATTAG
TGCCTTTGACATAGCTTGACATAGCTTTTCACCGTGAAGTTTTCCAAACA
GTCAGAGGCAATAGAGGCTCATATCTGAAAGAATTTAACGTTTGAAAGTC
CTCTTCCcctgaaatcaaagatgaattttgaccaaattgattttttttgg
gggagggggtattttaaaatttgaatttaaaacattAGTGGCACATGTGA
AAGGATGAAAACTTTATGATTTAAACCTGCTTTGAAATGGTTAGGATGAC
ACAACATCACTTCAAAATGTAAATACGAGATACTATAAATTTAATTTGAG
TTTTAATTATCATATTGTATTACAGTTAGAAAGTTTATATCTTGCCGACG
TAGAAATTTGGTATGTGTTGATACGTTAGAACTAAAACCaaagcttttta
aaatcatTGGTATAAATCACACCAAACATAAGTGGAAGTCAAAATTTATT
GGTTCTAAGCGACATTAGCGTGTAGTTCGAAAGAATAGTAATTCAGTGGA
TTTAAACAAGAACTCTAATTAGGTCCCGAATAAACATCTCCCCCCCCCCA
CTTATTAGTTTTTGAAAATATTTTCAGCTATCACAAGCTGAATTGCTCTA
AATAGCTTTAGCTTATAATTACCTTATTTTGGGCTTTTTTTAGGTACAAT
TTCCAACCCCCCGGtttattagattttgaaaataaattcggATCCCACCC
CCTGTTTTATTCGGACCCACCCCCTCCTACTAGTTTGGACCTTAGAGTTA
ACGACTTTGTTTAAATGTTCACATAACTTTAATAGGATTCTATAGACGtt
aaatcaatgtttttttgtcGTTATGAGTCGGCTGGGATGGAATTTGGTTA
TCAAAGAgtcccagctggtacacaacgttgtttcaacgtttattctAAAG
TCcgcaacgtccatataacgtcagATTAGCGTTGTCTATTCTGCAGGAAC
TGAGCATTGATTAAATGATATACTTTAGTTGTTAGAGATAATTTANAATC
CTATTCTGCAGGAACTGAGCATTGATTAAATGATACACTTTAGTTGTGAG
AGATAATTTATTAAATTTATGTATGTatgaatttgaattatgaaACTTTA
GATGTGTTTATATTTAAAATCAATTAATTCTGTCATTTTCTGTCGAGAAA
GAATTACCTGGAAGAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_102:135201..151088+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045830 ID=TCONS_00045830|Name=TCONS_00045830|organism=Clytia hemisphaerica|type=transcript|length=15888bp|location=Sequence derived from alignment at scaffold_102:135201..151088+ (Clytia hemisphaerica)
GCATTGTCCGCTTATTAGAAGACATACGGTAAAAGTGCCttcttcagagg
tttaccgtaaGAAATTTATGACCAGCTGTTTATCAGGTTACTTTACGCCA
ATTCTCACTGGCGTTTCAGCTCGTTTGTTAAGGGGTTATTATTATAACTA
CACGCTTTTATGAGAAAACccaaactttttgaagccttcggatgttctaa
actttttgagttccaagcctaaaaatattcttaacatgttctttttaatt
tcaccattttgtgagtatttctgtccattttcttaagaaattgggtgttt
tagagttcgcaaagccttaaaatgttctaaacttgtttttttaacatttt
ggtcatcgaagccttatgtttttatatagtttgttcttgtaaaaaacgtg
taccattCTTTGGCTGTGTCCAGACCAGAAAGTTTaaagtacagggtgtc
cctaattaaagtatcgagtcgaaacacaactatgagtagaaagttttatg
tgcgtgttcacaaaattgtattttaagctctccctcttttttctttgtcg
ttacgattaatttataggttgtaactaccttttgtacagggtgtccctaa
ttaaagtatcgagtttgaacatgcgattgggtagaaaagtttgtgtgtgt
tatcgctaaaatataagaacgttctccatcacacaggcttattacaaaag
gtagttacaacgtataaattaatcgtaatgacaaagaaaaatacaatttt
gtgaacacgcacataaaactttctactcatagttgtgtttcgactcgata
ctttaattagggacaccttGTAGTACTAAGTTGATATGAGATTTCAATTC
TGATTACTCATCTTCTTTTCGTTATTCTAAAAAGTAAAGAGCATTGCATT
TTACAATAgtagaataaaaaaagaatgtagtCCTAATTGCCTACTTAAAC
CTACATTTCATCCTGAACGCGACCGTTGTTCTCAGGACAAGGCATGCTTT
TTTATGGTTTCGGTTTATTAATTCTGTGTGTGTTAATGGGGAAGCAATTA
ATTCATTCATTAGCGTTTGTGGTCTCCTAAAAAGACGCAAGAAGTCTTTT
ATAAGAAGCAGCAGTTGGTTCTGCTGAGACTCATATTTGTTgaactgttt
ttattttctggctctTTAAGCCTCAAATTGTGGTCttaaaattgaagaat
tttaGGCTCTTGTCCGATTTTTACCACTTCCTTAACCTTTCAAATGCCTC
AAATACAACAATCCTAGGCTGAGTGTTGTTGTTAAATTTtccaagatttt
taaatttttcacgaTTTCGAGTCTGcgactgttcttataaaattttgtCC
TCATAAAAAAGGACTGCattgataataattttttgTTCCATCACTTTTAC
ATAGAAAAGTCTAACAGAAACTGGAATGAAACGATGATGGCAATGCTTGA
GAATTTGTTTTAAGTATGGTTTGTTAGCTTTTTATCTGGTGAGCCTTTCA
AGAACTTTTAGAATGTTACCGAGTATAGCCCGGAAACCTAGCGATAATTT
TTATGATGGCGATGGCTTCAGTAACAGTATAGTAGAAAAGAGTCAGAGCC
AGATTCTTTGGTTAGTTAGTGAGCTGTAATCATAGATCTGTAAATCCGCG
GCCTTTATCTAAAAGTGAAGCATGTTTtgataggatttcctaccaaagaa
atcacgtgacaacaagcactggtttgagagatgcgaaatagcgtttgccg
cctactttttttatctcgcgctccgaaaacaattaaaatgctacatccta
tccatcggcacgaaatttaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNgcacgaaatttaaaaagtcaaattttt
gcttcactttttttttgctggagaaagcttaaagttgcctatctagccct
tcgggctttacagatctgtggctGTAATGACTTCATACGATAGCCTGATA
GTAGATCAACTTCTTAGCGCTTAATCTATTATCTATTTgacattttaaaa
ctttataaCCTAATGTTTGTATGTATAAATTTGAGCGTGTGAATTTAAGC
TCGGTGCGCAGACGCTTAGTTATTGGTTATACGAAACAAATTAACAACGC
GTGGAATTTGATCTACTATCATGCTATCGTGTGGAGTCATTACGTGATAT
TTTCGCCGGTAATTATAATTGGAGattattagttacacggtcttctcAAG
GCGGGAcacgggatatacagggtcattaaaaaccgtattggtggcgaAGC
TTGCCGAGtatatcccacctccacgtgatgtcttttgaccaatgaaatca
CTAGGATGTTACTGATGCGGGATAAAAAAATGGTATCGTAAATAGCGAAA
GGTCTATGGGTTTAGTCCTTTCTTCTGCTACGCTAGATCTgttaataccg
agtttatgtatcagaggatatcgagggcgacggtaagtgaaatgatacaa
aacaaagtcgatggttgatgtacggctctatatcgcctttgctcacctaa
acagacgacggtattttggtgtttttaccgttgtcgagcaaagtggacgg
tgattttggagacatgtcaactttgcttttataccgtccccctcgattta
tctcgaatacataaactttcatccgacacgctaaagctctgaaggtcagg
aaaattttcaacatctggaaggtttacattacggaattttgcgagaccga
attttgcagcgggaggtccgGTAACCCAgtcctcgttttcggggattggc
aggtccaaccgaaatatttataggtttacgcgcaagggctgttgaacccg
actgggggtgcggcacatcaaaggccgactatcattcctctccgatggga
aattggcccgctcctttagagctttagcgtggacggccgccaatccgcca
tcggaatatcagataacataATCTGTTAATCTGGGCANccgtccccctcg
atttatctcgaatacataaactcactaatCTGTTAATCTGGGTGGTACCA
AAAAAAACAGCATGATCAGGAAACAGGAAGAAGTTTGAGATGGAGTGAGA
CAATCGGATAACAAACAAGTACTAAGCGAAAGGGGAGGAAATAGGCGGAA
AACGGAGAGAGGGGGAGAAGGAGGAGAAGGAGTAGGGGTACGGGATGGAG
GTGTAAAAGTTTCAAGATGGCATTATTCAAactaaactttttttataaga
accagaaaaattttgataaggttcgattgttcttgttttttggcactttc
agtCTCAAATTATTTGTATCCTGTTCTTCGGGTGAAATTGAAGTATTTTA
GgatttatacccaatttttacttcTTTCTCTTACTTTGAGCAATTCCAGG
TTCAGCAATGTTCttagattgttcttattttttggcgattttgagcctca
ttgttatcatagaattgttcttataaaagataaaGGTGTAGCTACCTTAA
AAGCTTAATAAATCATTTCCtctaagttgaaaaatttcttatCTCTTGAA
AATTTAGGCACGAATTTAATTATAAACCATCGTTTGATGGATGGCTGGAA
GGCGTATCTCGCCTAAATCTCTTCTTGTTTAAATTCTTCCTTTTAAATAA
CCCTTATTATATCAGTATAAAAGCTTCTATACACTGTACTATGCTACACT
TTAAGCATTTAAAGTATTCTCTCTTGGGaagaagaaaggaaaaaagaaaa
atggcagATGTGATAGTTCGTACGCATTCTTATACTTGCTGGATATAAGA
ACATTAGAACGCTTTACAGACTCTAGAACTAATGAGTCTACTACGAAGGA
CGAAAAACGTGTCTGCCGATAAATAAATAGTCTCTTCTAGAACATGCATC
TATTAGGAAATTAGACCGAAATACTCACGAAACCCCTAAAATGATAGCAG
CTTCGGTACATCCTAAAGCCTATaaaatcttgatgttcttataaaagaaa
gcatTTAATGCTACTGTTATTTCCCCCTTTTCGAAGCTAAAATGAAGTTA
TACTTTTTGTAATACTCtgtttattatatattataaatgtattttttttt
atcaacctACGAAAGTATATGTGTGTACCTTTTTAAGATGTTATTTATCG
CGATGAATTTTGATAGGGGGTAGACTGAAAGAACTtcttgaagaagaaga
aaaaaccacATTTTTTCTTCGCTAGCTACAGTTTTTAAAGTTATGTGTTA
TTTTGAGgggatcattatttttttacaagatgTTTTTGAAGGGAACTAAA
GTTACAGGATAGGGTAGGGCGATAGGCgttaaaagaatattttttgttta
tttttttggtgGTTTGGCATTgacgagcccccccccccccccNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccccgagcggttt
tcgtgatgacgtgatagggacttttttgcagcgtgattacgtaatttgga
aatttttgcttttcttcgtgattgcgtgtgagaggtcaaaacgtgatcgt
gattttaaaaagatttttaaaccgTGATATCGTGATCCGAATTACCGCTG
GGGGCCTCATTGACATGATTTGGTATATTGACAATAAGAAGTAATTAAAA
ATAATGGTTAGGATTATTGATCCAGTTATAGTTTTGAACCCCTGTCTCAG
TTCCCCTATGAGAAGTTTTTTAGCTATTGGTGGAAGTGACCAATTAGTTA
GTATCGTGTGGTTTCGAAGCATAGGATTTAGcaggaattaaaaaaaacta
cagGTAGTGGCTATCCTAGCCCGGAGATTGAATGGATAAATAGATCGAGT
GACGATGTGTTGCGCGGTGACTGAAAATCATTGACCAATGACCGATTTAC
TTCGAAACGGGATacgaaattttgtaaaaaagtgctgacgtcagcaaaat
ttcaaacttattttttgggaaaatgatccttttaatgaatcaacggatcc
tgcactaatgtacttcccagttttctaGTTGATTTCGGTGATTCATTACC
tataagtaatacgcacttgatttcacacagatccttttaatgatgttCAA
CTTTAGTACAACAAGACAGGGTTAGTGATCAAAGACGCCTTTTGGGTGTT
CTTCCCATCTTTCAGTGGTCTTTCAGAAAACTTGGTCACTAGGGAGGGGG
GGGTTTGGCTACTGTCTGTGAATTGGATAGTGATTTTAAAACTTCTCAAA
ACATCCTTCATTTTTATCCAGAATTTTCCAAAAGAGGCAACAGAGACCAG
TGATTGATCttgtatttcgatatttttcataagcttctgctcatcctcaa
GCGAAAAAGTTTCTCATATAGGAAATATATCTATATtttgcgattcagac
tatattTCTCATCACCACCCTACCGGACACAGAGATGGGAAAGGATAAAT
TGTCCGTACCCCCTGGATCTCCCGGATATACCGTTTTTAGATTCTTTTCT
CACCACTTTAAATATTTCTAACTAGCTGACTTACTTAAATTTTAGAAgag
tgaaaaatgaaataaagaagAGAATAAGATCGTAtgataaagcaaaaaaa
agtgaaaatttaagGAGTCCAAataaagaaaaggaagaaagaaGATATGA
TAATGAAAAAATGATACCTGAATATCAGGTaagtaaaaatgttttgtttt
caaattcttCAGTTCCTTTTTCGTTTCCTTCTTCCCTCGTTTTTCTccta
taagaacaatttttacaaaagttttatGAGCCTCGAATTATCGTTAAGAC
CTGGAAAGAAATGCATTTATGCACAATATGCAAATGATAGAACTTTTATT
TCCGCGGGAAGATTGATTCCCgaggggggggcactgggtttgcggactga
cggtatgtgcgggccaaaaattggcttttaaaattgcacccttacagNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNccgacccttacagtgcattttaaacatattggaaaaggtaccctta
ggacccgcacatacccgtcggtccttttgcccagctgccccccccccggg
gattgATTCTAATTAATTTTACGCGGTTTGGATCAGAAATCCGACGAATC
TCTAGTCAAAAGAATCATTTTCATACTACTACCTAGCTCGCTTTTTATAA
TACTGAAAGCGATCGATTGATTATCACACATACATCGGTAAATTCAAAAA
GTAGCCTGGGCTCGAGTTTACTCGGGGTGAATTGCGCGCTAAATCTGCGG
GTATATTTATGGAATGACGCCGAATTCTATCCTTACAAACTCAAGTCTAA
TCTTCTATTAGGGAACTTTATACGTGAGGTTTGACAGGTATATAAAGAAA
AGTGACCTTAGGTGTACGGTAGAGAGAATTCCGCTACAGTGCGTGAGGTC
TGGGTCATACTCCATGCTCAGTATTAAATGGTACAACTTAATACTCAGCA
ATTAAGAAAAGGATCAAGGTTAAGTGGAGCGATCAGGGAGAATaagtggc
accctcccctaccttcgggtggaTAGCCAGCAAATTTTACAGTAAAAAAA
TCCTCTAAAATTGGCATTTTTAGTTTCTGTTGTCATTCTTAGAGTCTgct
gccaaattccatgatggtgacgttcttaccatattcttaatttgttggcc
gatttcattatgaatattcttataaagtaaactcCTATAAAAAACGCTTA
CCCGATTATTACTAATTTGACACTTCGTGTGCTTAAAATTCAGTCATTAG
CCTGACAGCTTCGCAATTATTTTCTTAATGTTTTTGaccctcattgttct
tataaagttgaaaaaaaagtggattttgGATCTTTTAAACCTATATTCAT
CTTTTCCTATTACAcgtttttgtataagaacataaggcttcgatggccaa
aatattaagaacaagctcagaacattttaaggctttgtgtgGACACACAC
CCGtattcttaggaaaatgggtaaaaatggtcataagaacatttttaggc
ttgaaacccaaaatgttaagaacatctcaaggcttcaagaattttggatg
ttcttataaaagaaacgtaTATTCACCTTTATCCTCCTTTTCGAACCGGA
TCATTCTGAAATAGAGGAAGTCCAAAAAACATCTGACGCAAAACTTGTTC
TTGGTCACAATAGATAAAAATCTTAATTGCATTTTGCACGGAAAGGTTGA
GAATGCAAATTTCGTTTTTACCCCCTTCCTTTTTAAACGGAaccaagatt
tttcaaaatgtaatatgttaaaaaagtttattttgtaCTTTAAAAGCCTT
GTCCGATCTTATTGTATTCTGttggaataaaaaaattctaaattagTTAA
AATGGATTTTAAGTAGCAAATCTCTATTGCAGGATCTTAtatctaaagtc
tgtccagatataattggcagtggaaacaagaatgcctgtaacttttgata
gtcaaatataattatggaatttttatttgcttgtttcaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNcaaaagcgctatatttgaatgtatttttggttgaaa
aattcgcgatttttagcggttaaatttgcgattgtaaaaattgagctttt
tttttacttatgctataacgttcatttttacaccagtggtagttcaacct
taggttaagaattttcttaaatttcaaggcgaacagaaaagtccttcgga
agatatgggacccgaaataccccttggtagcacttttctgtgaaatatca
tatctccaacttattactaaaaacgttTATTTGGAACNggttatgttatc
ttttttgaacagtgcaattaaaagttggaaagtgttggtgcattggtatt
attggtatcattgattatttcgaaactaagtgaaatcacagtataattgt
ttttattgaaaggataagcatgaacttacaTTGCCTTTGCTATTTTTAAG
gtattaaagaactttgctaattcccaaaacactaagcacagtttggctat
gaggtcattaaagagatcgtaaaatgtgttatatGATCGAACAACTGTTT
TATCAtgtcactacccccgttttagtaataagttggagatttgatatttc
acagaaacgtgctaccaaggggtatttcgggtcccatatctcccgaagga
cttttttgtacgccttgaaatttaacaaacttctaaacctaaggttgaac
taccactggtgtaaaaatgaacgttatagcataggtagaaaaaaagctca
atttttgcaatcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTattctctgaa
acaagcaaaaaaaatttccataattatatttgactatcaaaagttacagg
cattcttgtttccactgccaattatatctggacagactttaaataAGTTT
GAGCTTAATGgcccagtgatattcatattgggAGTTTATCGTGGCTTAGA
TCACaagagccaaacgtaaatctcgtgatccaagccacgataaacctcca
atataaataaatctattATACTCTCATACTTTATTCATACGCGTTTACCC
CGTTTTTGTTataaaagaatttcaaagtATTCAAAAATAACTGCCTGAAG
GTAGGGGAGATAGCTTTTTTCTACTCCCTCCCGGATGGAGAGGGGGGGTG
GTAATAAGTGGTTGAAGAATGTCAGGAATGTGCGGACCGGACCCTCAAAA
ACCGGACCCTCAAAAACCGGACCCTCAAAAACCGGACCCTCAAAAACCGG
ACCCTTAGTAGAGAGTAATTAAGTGCCATATTCATGATaggcaccattgc
aatgtcttccacgaacccaacagctgattggttgaaagtgacgtattgat
tgatattacgtcactttcaaccaatcagctgttgggtccgcggaagacat
tgcaaaggtgcatatcatgaatagaagtCTTTGATATGACCCATAACCTT
GAACAACGAAGCCGAGGAGATTTTAATAGCTAAATACGTTCACGTTTATT
CTTTAATTTCAGATTCGGAAACAACGTGGATTCAATCGAGTAATATGGCT
GTCACCACAGGTAGAAAAAACTTGTTGGATCAGGCTTTCCATATTAACGA
AATTGTGTCCAGTTTTAGAGTTATCTCATCGGCTATTTTCATTTTGGTTT
GAAAGAATCGaacgtaaaaaaagaaaacagcaTGGTGAAATAGGGTAGAC
TAGTCGACAACTGGACGGGTTTTACTGGGAATCTGTAGTCCACTACCTTA
AGTTTATTAATTTTGGTGGTATCCAATTTGGTAGacaaaaacaaagtttt
aactTCCGGATTTTCTTACGGCTTAAGCCATAGCCTTTAGAGTGCATGCA
TACCAGCGcggagtatcagaatctgctcaGTAAGAGTGTCAGTTGACAAT
GCCTTAAAATATATTACCTAAACTTGTTACGTCGCGAACGATAGTAATAA
GCTCTTGGTAGCAACAAttgataaacaaaaatttcaggtCACTGTTTTAG
CCTTTGCAAATATCGACTCAACATTATCCACTTTCGTTTTTAGATCAACT
TTATATCATTGCTTCAGTCTTGGTTGTTCTAATTCTCATCCTAATcattg
catatctggtctggtATTTTTACTACCAAAGACGCCATGGTAAAGGATTC
GAGAAAATACCTTCTTGTGAACGAGGTCAAGGTCACCCGGTTCTTAAAAC
TCCAACTATTGATATAAGTACTGTTAAATTTACTGTCCCGACTGGGCCGC
CTGGTTCACGCCCCTATTCATGGGCGCCTGGTAATGATGATTTTGATGTT
CATCGCGATGCTGGAACAGCAGGATCGAATAAATCGGGCGCCAGTGGTAG
TTTAGGGCGTGGATCATCGGAACAGAATTTAGGGTTACTGAAGCCCGAAC
TTTATGTGACGAACGAGGAATCCGATTACGAATTAGAAGAAGACTTACCA
CCAGGGAATATCGGTCGAGTCTGGTTCTCAATCGAATATGATGCATCATC
AGAAAAACTAATAGTGAATGTTGACCGTTTACGGAATTTACCGGGGCGCC
AACAACGTTCCAGTTTAGCATTATCCTCTACGTCTTCGTGTGATCCTTTC
CTGCGGTTATATCTACTACCGGACGAAAAACGGTATCTTCAGTCCAAAAT
GAAACGTAAAACACGAAATCCAACATTCAAAGAAACTTTCATGTTTACAA
TGTCTTATTCGTTGTTAGTTGAACGAACTTTAAGGATAACTGTATTTGAC
GTGGATCGATTTATGAGACAAACAACAATCGGACATGTTTTGTTTCCATT
GGAAAACCTTGATATCACAACTCCAACGGATTTGTGGCGAGATGTTGAAC
GTTCTTCACAGGTAtatagtttttgtttttgtttttgtttttgctttttt
tttctctaaaacgATAGTAAAGGTACATatactttcgcgggcagaaactt
tcaccATTTTCGCGATCTTTGCCCATTTTCGGGAAAGTTTCTGCCAAGTA
AGAAATTCCACGAGGAATTCGCCAAAGTTTTTTCCGGGAAAAGTAcactt
ttttgctattttatactcagttttattacttttttgcctgcaaaatgaaa
taaacattCGCGCTGAATTcgttccaaaattaaaattcgcgaaagtttct
gcccgcgaaagtttctgcttttAAAGTATAGAGTGTCCGGAAAAAAGCGG
AATGGAACGTATACAAATAAAAAACTTCACGCTTCAACCAGTTTTTACGG
TCTTATTACTCCACTGTACAATGTTTTTAATCTTCACAGGTCTACAGTTT
TTTTTCTGGTTtggtttttcaatatttctctAAAAAGATAACATACAGAG
TGTCCCATAAAGAGTTTCCCGTAAAAAAAGATATGAAAGGTATTTTTTGG
GGAAATAAATTTAGACATCTAACTATAAAACTAACAAGTCACATATGTTA
TGAcaatcaactctctctaattcgaacgcctgttacacgcttttttttat
aagaatacactttataagaatgttCATGATAAAAATGGCCAAAAAATTAA
GAATatgctaagaatatcaccatcatggaattttgagacgtatgtactaa
atgttaaatctagtctgaattaggatcctaacctaagaatgctgtaaaaa
tattttaggataattttcccaaaaaaagttaaggaTATCcgtgatgaaat
ggatttacaccattcttatagaaaaaaagcgtgtattcaaaTCTTCCCAT
AATTTTTGGTGtctagtttttctttttttctctaaaacgATAATAAGAAA
AACATACAGAGTGCCCCATGAAAAATTCTCCGTAACAAAAGATGTTAAAG
GTATTTTTATGGGGAAAAGGTTCAGAAAGTTTAGAACTATCAAGAACAAA
CGActggttctcataaaaaactATCATTTTACACAGACTCAAAACCTCGT
CCCCAGTGGGaagaataccctacaatttcatccTCACTGgggaattgact
ttgatttcatccccattcaaaattcaatgtaaaaattgcactccaaaacc
atccccaccaGATTTTTTGACTTAGAaagaatagaaattttatccccatt
gggttTCAATAGCAAATTTTATCCCAACTGTGGGAagaagtttcaccggg
gctctgtgagacaggggtgccaTTTTATTCATAATGGTGACAACTCATTG
GATAATTGATTTCTTTAGATCTCAAGTGGTGCCGGAAGGTTACAAATTGG
ATTGACCCACTTCCCAGATATCAATCGTGTGGCAGTAAACATCATAAGAG
GTCAGCAAATTGGTAACGAAGATATAACACTTCCAGGTATGTTTCCACTA
TCCGgaatatatttatatttatttatatttcataaagctgaaaattacta
gtctgaatcacagacctctatagatatacttcctatatgagaaacttttt
tcgctagaggatgagcggatgagcagaagcctaagaAATTACTGAAACAC
TGaattattgaaaaaacttttgcttttCGCCGTGAATTCAGCCCAAAATT
CATGTCTTTCCCATCGTTAGATTTAATCCGTTATTTTAAGGTTCAAATCT
CTAGACTCAAtagtaggggccactatgtcgcgaaaaagcttcccgtgtgc
agcagcttgtgcaaagggattttatgattaaatattgttccttgaatgta
gagaagatcaaaatttgagtggtggggccgggtgtgaccacccgttgcca
tggaaactgacgtcattggttactatggcaaccaaaacaaaaagtcgtca
aaattgaaaattatttgttccattcgaaagagcatgaaaaactgataaag
aaaaaggtcacaatctatatctgaaaatgaatatatcaggagatattaag
gaaataaggcaaaatgacgtcataaaacgatgacgtcatcgaaaaataaa
aatttgccaaaattcaaaaagttttggttttttggaaagaataccttcca
gtgaacataaaatattatgacgaaaaagtctgaaaatcctttttaagaag
tcttttagccaaaatttatatttttaaattttgcctgtaatgtGCTGGGC
TGCACGTACCCCAAGGCTACAACCTTTGacaggcaaaaattgaaaatgtc
aattttggccaaaagacatttttttaacgggtctgtgagaagggggtgtt
aatGAGAACCAACTGTATTTTGTATATTTCAGATTCTTATGTCAAAGTGA
CGTATTCCGTATTAAGCAAAACTCATAAAGTCAAGAAAACTTCCACACAA
AAAGCAACCAAAGAACCATTCTATAATCAaacatttgaattcaaaattga
tCAACAGGGTATGGAAGTAGCTTGTTTCAACTTTGAGATATTTCATTCAA
CATCAGGTATTGGAAAAAATGATAAAACGCTTGGATCATTCATAGTTGGT
GGAGGTTTGTGCGCTAGAGGTAAAGAACTTGAACATTGGACAAATATGCT
TCAAAAACCACAAACTGTCGTTAAAGAATGGCATAACTTaaaaaattaag
gaaaaaatgattttttatggtcCTCGATTTGACTACTAGATTTAGGGGAT
TTCAGAGGCGTATGAAATAccagaaaatttttccggccgatgACGGAATA
CCGGAACACCGAACGATACCAGAAACTCTAAAGCCCCCTATACTAGAAAT
ATAATGATGATTTTTTGTGCACTTTCTATGTTtaagtttcttaatttttc
aaaatcttttaagatttttttgtcacaataatttttactttttataaaaa
gggAAAAATGTTAAGCAATGTGGCTGGGTTGTCATCTTAACCTTTTCAGT
AACATAAATGGTGTAAAGTCGGTTAAAGGTTTTTTAGATCCCAAaagcaa
aatccaaaaaaatcattttgactCTTTGGGTGATTTCAAAGTGAAATCGT
ATCTAAATCGTTCAAAATAATTCTCGGTGAAAGGCTCAGAAATTCAACAA
TATTTGTTTATCAAGGGAACTAGATTTGGCGAACTGCAAAAAtccccaaa
aaaattaaaattgatgactgggtaattttttaattttggtgaatttattG
CCAAATTCCTCAAAAATTAGTGCCTTTGACATAGCTTGACATAGCTTTTC
ACCGTGAAGTTTTCCAAACAGTCAGAGGCAATAGAGGCTCATATCTGAAA
GAATTTAACGTTTGAAAGTCCTCTTCCcctgaaatcaaagatgaattttg
accaaattgattttttttgggggagggggtattttaaaatttgaatttaa
aacattAGTGGCACATGTGAAAGGATGAAAACTTTATGATTTAAACCTGC
TTTGAAATGGTTAGGATGACACAACATCACTTCAAAATGTAAATACGAGA
TACTATAAATTTAATTTGAGTTTTAATTATCATATTGTATTACAGTTAGA
AAGTTTATATCTTGCCGACGTAGAAATTTGGTATGTGTTGATACGTTAGA
ACTAAAACCaaagctttttaaaatcatTGGTATAAATCACACCAAACATA
AGTGGAAGTCAAAATTTATTGGTTCTAAGCGACATTAGCGTGTAGTTCGA
AAGAATAGTAATTCAGTGGATTTAAACAAGAACTCTAATTAGGTCCCGAA
TAAACATCTCCCCCCCCCCACTTATTAGTTTTTGAAAATATTTTCAGCTA
TCACAAGCTGAATTGCTCTAAATAGCTTTAGCTTATAATTACCTTATTTT
GGGCTTTTTTTAGGTACAATTTCCAACCCCCCGGtttattagattttgaa
aataaattcggATCCCACCCCCTGTTTTATTCGGACCCACCCCCTCCTAC
TAGTTTGGACCTTAGAGTTAACGACTTTGTTTAAATGTTCACATAACTTT
AATAGGATTCTATAGACGttaaatcaatgtttttttgtcGTTATGAGTCG
GCTGGGATGGAATTTGGTTATCAAAGAgtcccagctggtacacaacgttg
tttcaacgtttattctAAAGTCcgcaacgtccatataacgtcagATTAGC
GTTGTCTATTCTGCAGGAACTGAGCATTGATTAAATGATATACTTTAGTT
GTTAGAGATAATTTANAATCCTATTCTGCAGGAACTGAGCATTGATTAAA
TGATACACTTTAGTTGTGAGAGATAATTTATTAAATTTATGTATGTatga
atttgaattatgaaACTTTAGATGTGTTTATATTTAAAATCAATTAATTC
TGTCATTTTCTGTCGAGAAAGAATTACCTGGAAGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029295XLOC_029295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045830-exon-scaffold_102-1491911889:135201..135228TCONS_00045830-exon-scaffold_102-1491911889:135201..135228Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1510915933:135201..135228TCONS_00045830-exon-scaffold_102-1510915933:135201..135228Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1575043694:135201..135228TCONS_00045830-exon-scaffold_102-1575043694:135201..135228Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1491911889:145313..145360TCONS_00045830-exon-scaffold_102-1491911889:145313..145360Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1510915933:145313..145360TCONS_00045830-exon-scaffold_102-1510915933:145313..145360Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1575043694:145313..145360TCONS_00045830-exon-scaffold_102-1575043694:145313..145360Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1491911889:145844..146661TCONS_00045830-exon-scaffold_102-1491911889:145844..146661Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1510915933:145844..146661TCONS_00045830-exon-scaffold_102-1510915933:145844..146661Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1575043694:145844..146661TCONS_00045830-exon-scaffold_102-1575043694:145844..146661Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1491911889:148019..148136TCONS_00045830-exon-scaffold_102-1491911889:148019..148136Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1510915933:148019..148136TCONS_00045830-exon-scaffold_102-1510915933:148019..148136Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1575043694:148019..148136TCONS_00045830-exon-scaffold_102-1575043694:148019..148136Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1491911889:149033..151088TCONS_00045830-exon-scaffold_102-1491911889:149033..151088Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1510915933:149033..151088TCONS_00045830-exon-scaffold_102-1510915933:149033..151088Clytia hemisphaericaexon
TCONS_00045830-exon-scaffold_102-1575043694:149033..151088TCONS_00045830-exon-scaffold_102-1575043694:149033..151088Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:135201..151088 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	6.15373e-08	0.013679	0.0931349	0.0201595	0.0346194	0	0	0	0	0	0	0	0	0	0	0	0.156673	0	0	2.51209e-09	2.71142e-07	0	9.39363e-08	0	0	4.05184e-07	0.175599	3.90932e-10	1.26848e-09
Blast
[Close]
BLAST of TCONS_00045830 vs. Swiss-Prot (Human)
Match: SYT15 (Synaptotagmin-15 OS=Homo sapiens GN=SYT15 PE=2 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 1.031e-55
Identity = 113/307 (36.81%), Postives = 173/307 (56.35%), Query Frame = 1 
Query:  412 LGLLKPELYVTNEESDYELEEDLPPGNIGRVWFSIEYDASSEKLIVNVDRLRNLPGRQQRXXXXXXXXXXCDPFLRLYLLPDEKRYLQSKMKRKTRNPTFKETFMFTMSYSLLVERTLRITVFDVDRFMRQTTIGHVLFPLENLDITTPTD--LWRDVERSS-QISSGAGRLQIGLTHFPDINRVAVNIIRGQQIG-NEDITLPDSYVKVTYSVLSKTHKVKKTSTQKATKEPFYNQTFEFKIDQQGMEVACFNFEIFHSTSGIGKNDKTLGSFIVGGGLCARGKELEHWTNMLQKPQTVVKEWHNL 1320
            +G + PELY   E+     E D P G +GR+WFS+EY+  +E+L+V + + ++L    +          +C P ++LYLLPDE+R+LQSK KRKT NP F E F+F +S   + +R L+ +V+ VDR  +   +G VLFPL+N  +       +WRD+E  S +  S  G LQ  L++   ++R+ V ++R + +   ED  +   +VKV+    +K  K KKTS    +  P YN+TF FK D   ++ A  +  +  +    G   + LG  +VG  +  RG+ELEHW  ML KP+ +VK WH L
Sbjct:  124 VGAINPELYKFPEDKS---ETDFPDGCLGRLWFSVEYEQEAERLLVGLIKAQHLQAPSE----------TCSPLVKLYLLPDERRFLQSKTKRKTSNPQFDEHFIFQVSSKTITQRVLKFSVYHVDRQRKHQLLGQVLFPLKNETLVGDCRRVIWRDLEAESLEPPSEFGDLQFCLSYNDYLSRLTVVVLRAKGLRLQEDRGIVSVFVKVSLMNHNKFVKCKKTSAVLGSINPVYNETFSFKADATELDTASLSLTVVQNME--GDKSQQLGRVVVGPYMYTRGRELEHWDEMLSKPKELVKRWHAL 415
The following BLAST results are available for this feature:
BLAST of TCONS_00045830 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT151.031e-5536.81Synaptotagmin-15 OS=Homo sapiens GN=SYT15 PE=2 SV=... [more]
back to top