TCONS_00045832 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045832
Unique NameTCONS_00045832
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3310

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045832 ID=TCONS_00045832|Name=TCONS_00045832|organism=Clytia hemisphaerica|type=transcript|length=3310bp
TCATCACCACCCTACCGGACACAGAGATGGGAAAGGATAAATTGTCCGTA
CCCCCTGGATCTCCCGGATATACCGTTTTTAGATTCTTTTCTCACCACTT
TAAATATTTCTAACTAGCTGACTTACTTAAATTTTAGAAgagtgaaaaat
gaaataaagaagAGAATAAGATCGTAtgataaagcaaaaaaaagtgaaaa
tttaagGAGTCCAAataaagaaaaggaagaaagaaGATATGATAATGAAA
AAATGATACCTGAATATCAGATTCGGAAACAACGTGGATTCAATCGAGTA
ATATGGCTGTCACCACAGATCAACTTTATATCATTGCTTCAGTCTTGGTT
GTTCTAATTCTCATCCTAATcattgcatatctggtctggtATTTTTACTA
CCAAAGACGCCATGGTAAAGGATTCGAGAAAATACCTTCTTGTGAACGAG
GTCAAGGTCACCCGGTTCTTAAAACTCCAACTATTGATATAAGTACTGTT
AAATTTACTGTCCCGACTGGGCCGCCTGGTTCACGCCCCTATTCATGGGC
GCCTGGTAATGATGATTTTGATGTTCATCGCGATGCTGGAACAGCAGGAT
CGAATAAATCGGGCGCCAGTGGTAGTTTAGGGCGTGGATCATCGGAACAG
AATTTAGGGTTACTGAAGCCCGAACTTTATGTGACGAACGAGGAATCCGA
TTACGAATTAGAAGAAGACTTACCACCAGGGAATATCGGTCGAGTCTGGT
TCTCAATCGAATATGATGCATCATCAGAAAAACTAATAGTGAATGTTGAC
CGTTTACGGAATTTACCGGGGCGCCAACAACGTTCCAGTTTAGCATTATC
CTCTACGTCTTCGTGTGATCCTTTCCTGCGGTTATATCTACTACCGGACG
AAAAACGGTATCTTCAGTCCAAAATGAAACGTAAAACACGAAATCCAACA
TTCAAAGAAACTTTCATGTTTACAATGTCTTATTCGTTGTTAGTTGAACG
AACTTTAAGGATAACTGTATTTGACGTGGATCGATTTATGAGACAAACAA
CAATCGGACATGTTTTGTTTCCATTGGAAAACCTTGATATCACAACTCCA
ACGGATTTGTGGCGAGATGTTGAACGTTCTTCACAGATCTCAAGTGGTGC
CGGAAGGTTACAAATTGGATTGACCCACTTCCCAGATATCAATCGTGTGG
CAGTAAACATCATAAGAGGTCAGCAAATTGGTAACGAAGATATAACACTT
CCAGATTCTTATGTCAAAGTGACGTATTCCGTATTAAGCAAAACTCATAA
AGTCAAGAAAACTTCCACACAAAAAGCAACCAAAGAACCATTCTATAATC
AaacatttgaattcaaaattgatCAACAGGGTATGGAAGTAGCTTGTTTC
AACTTTGAGATATTTCATTCAACATCAGGTATTGGAAAAAATGATAAAAC
GCTTGGATCATTCATAGTTGGTGGAGGTTTGTGCGCTAGAGGTAAAGAAC
TTGAACATTGGACAAATATGCTTCAAAAACCACAAACTGTCGTTAAAGAA
TGGCATAACTTaaaaaattaaggaaaaaatgattttttatggtcCTCGAT
TTGACTACTAGATTTAGGGGATTTCAGAGGCGTATGAAATAccagaaaat
ttttccggccgatgACGGAATACCGGAACACCGAACGATACCAGAAACTC
TAAAGCCCCCTATACTAGAAATATAATGATGATTTTTTGTGCACTTTCTA
TGTTtaagtttcttaatttttcaaaatcttttaagatttttttgtcacaa
taatttttactttttataaaaagggAAAAATGTTAAGCAATGTGGCTGGG
TTGTCATCTTAACCTTTTCAGTAACATAAATGGTGTAAAGTCGGTTAAAG
GTTTTTTAGATCCCAAaagcaaaatccaaaaaaatcattttgactCTTTG
GGTGATTTCAAAGTGAAATCGTATCTAAATCGTTCAAAATAATTCTCGGT
GAAAGGCTCAGAAATTCAACAATATTTGTTTATCAAGGGAACTAGATTTG
GCGAACTGCAAAAAtccccaaaaaaattaaaattgatgactgggtaattt
tttaattttggtgaatttattGCCAAATTCCTCAAAAATTAGTGCCTTTG
ACATAGCTTGACATAGCTTTTCACCGTGAAGTTTTCCAAACAGTCAGAGG
CAATAGAGGCTCATATCTGAAAGAATTTAACGTTTGAAAGTCCTCTTCCc
ctgaaatcaaagatgaattttgaccaaattgattttttttgggggagggg
gtattttaaaatttgaatttaaaacattAGTGGCACATGTGAAAGGATGA
AAACTTTATGATTTAAACCTGCTTTGAAATGGTTAGGATGACACAACATC
ACTTCAAAATGTAAATACGAGATACTATAAATTTAATTTGAGTTTTAATT
ATCATATTGTATTACAGTTAGAAAGTTTATATCTTGCCGACGTAGAAATT
TGGTATGTGTTGATACGTTAGAACTAAAACCaaagctttttaaaatcatT
GGTATAAATCACACCAAACATAAGTGGAAGTCAAAATTTATTGGTTCTAA
GCGACATTAGCGTGTAGTTCGAAAGAATAGTAATTCAGTGGATTTAAACA
AGAACTCTAATTAGGTCCCGAATAAACATCTCCCCCCCCCCACTTATTAG
TTTTTGAAAATATTTTCAGCTATCACAAGCTGAATTGCTCTAAATAGCTT
TAGCTTATAATTACCTTATTTTGGGCTTTTTTTAGGTACAATTTCCAACC
CCCCGGtttattagattttgaaaataaattcggATCCCACCCCCTGTTTT
ATTCGGACCCACCCCCTCCTACTAGTTTGGACCTTAGAGTTAACGACTTT
GTTTAAATGTTCACATAACTTTAATAGGATTCTATAGACGttaaatcaat
gtttttttgtcGTTATGAGTCGGCTGGGATGGAATTTGGTTATCAAAGAg
tcccagctggtacacaacgttgtttcaacgtttattctAAAGTCcgcaac
gtccatataacgtcagATTAGCGTTGTCTATTCTGCAGGAACTGAGCATT
GATTAAATGATATACTTTAGTTGTTAGAGATAATTTANAATCCTATTCTG
CAGGAACTGAGCATTGATTAAATGATACACTTTAGTTGTGAGAGATAATT
TATTAAATTTATGTATGTatgaatttgaattatgaaACTTTAGATGTGTT
TATATTTAAAATCAATTAATTCTGTCATTTTCTGTCGAGAAAGAATTACC
TGGAAGAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_102:140859..151088+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045832 ID=TCONS_00045832|Name=TCONS_00045832|organism=Clytia hemisphaerica|type=transcript|length=10230bp|location=Sequence derived from alignment at scaffold_102:140859..151088+ (Clytia hemisphaerica)
TCATCACCACCCTACCGGACACAGAGATGGGAAAGGATAAATTGTCCGTA
CCCCCTGGATCTCCCGGATATACCGTTTTTAGATTCTTTTCTCACCACTT
TAAATATTTCTAACTAGCTGACTTACTTAAATTTTAGAAgagtgaaaaat
gaaataaagaagAGAATAAGATCGTAtgataaagcaaaaaaaagtgaaaa
tttaagGAGTCCAAataaagaaaaggaagaaagaaGATATGATAATGAAA
AAATGATACCTGAATATCAGGTaagtaaaaatgttttgttttcaaattct
tCAGTTCCTTTTTCGTTTCCTTCTTCCCTCGTTTTTCTcctataagaaca
atttttacaaaagttttatGAGCCTCGAATTATCGTTAAGACCTGGAAAG
AAATGCATTTATGCACAATATGCAAATGATAGAACTTTTATTTCCGCGGG
AAGATTGATTCCCgaggggggggcactgggtttgcggactgacggtatgt
gcgggccaaaaattggcttttaaaattgcacccttacagNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccga
cccttacagtgcattttaaacatattggaaaaggtacccttaggacccgc
acatacccgtcggtccttttgcccagctgccccccccccggggattgATT
CTAATTAATTTTACGCGGTTTGGATCAGAAATCCGACGAATCTCTAGTCA
AAAGAATCATTTTCATACTACTACCTAGCTCGCTTTTTATAATACTGAAA
GCGATCGATTGATTATCACACATACATCGGTAAATTCAAAAAGTAGCCTG
GGCTCGAGTTTACTCGGGGTGAATTGCGCGCTAAATCTGCGGGTATATTT
ATGGAATGACGCCGAATTCTATCCTTACAAACTCAAGTCTAATCTTCTAT
TAGGGAACTTTATACGTGAGGTTTGACAGGTATATAAAGAAAAGTGACCT
TAGGTGTACGGTAGAGAGAATTCCGCTACAGTGCGTGAGGTCTGGGTCAT
ACTCCATGCTCAGTATTAAATGGTACAACTTAATACTCAGCAATTAAGAA
AAGGATCAAGGTTAAGTGGAGCGATCAGGGAGAATaagtggcaccctccc
ctaccttcgggtggaTAGCCAGCAAATTTTACAGTAAAAAAATCCTCTAA
AATTGGCATTTTTAGTTTCTGTTGTCATTCTTAGAGTCTgctgccaaatt
ccatgatggtgacgttcttaccatattcttaatttgttggccgatttcat
tatgaatattcttataaagtaaactcCTATAAAAAACGCTTACCCGATTA
TTACTAATTTGACACTTCGTGTGCTTAAAATTCAGTCATTAGCCTGACAG
CTTCGCAATTATTTTCTTAATGTTTTTGaccctcattgttcttataaagt
tgaaaaaaaagtggattttgGATCTTTTAAACCTATATTCATCTTTTCCT
ATTACAcgtttttgtataagaacataaggcttcgatggccaaaatattaa
gaacaagctcagaacattttaaggctttgtgtgGACACACACCCGtattc
ttaggaaaatgggtaaaaatggtcataagaacatttttaggcttgaaacc
caaaatgttaagaacatctcaaggcttcaagaattttggatgttcttata
aaagaaacgtaTATTCACCTTTATCCTCCTTTTCGAACCGGATCATTCTG
AAATAGAGGAAGTCCAAAAAACATCTGACGCAAAACTTGTTCTTGGTCAC
AATAGATAAAAATCTTAATTGCATTTTGCACGGAAAGGTTGAGAATGCAA
ATTTCGTTTTTACCCCCTTCCTTTTTAAACGGAaccaagatttttcaaaa
tgtaatatgttaaaaaagtttattttgtaCTTTAAAAGCCTTGTCCGATC
TTATTGTATTCTGttggaataaaaaaattctaaattagTTAAAATGGATT
TTAAGTAGCAAATCTCTATTGCAGGATCTTAtatctaaagtctgtccaga
tataattggcagtggaaacaagaatgcctgtaacttttgatagtcaaata
taattatggaatttttatttgcttgtttcaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNcaaaagcgctatatttgaatgtatttttggttgaaaaattcgcg
atttttagcggttaaatttgcgattgtaaaaattgagctttttttttact
tatgctataacgttcatttttacaccagtggtagttcaaccttaggttaa
gaattttcttaaatttcaaggcgaacagaaaagtccttcggaagatatgg
gacccgaaataccccttggtagcacttttctgtgaaatatcatatctcca
acttattactaaaaacgttTATTTGGAACNggttatgttatcttttttga
acagtgcaattaaaagttggaaagtgttggtgcattggtattattggtat
cattgattatttcgaaactaagtgaaatcacagtataattgtttttattg
aaaggataagcatgaacttacaTTGCCTTTGCTATTTTTAAGgtattaaa
gaactttgctaattcccaaaacactaagcacagtttggctatgaggtcat
taaagagatcgtaaaatgtgttatatGATCGAACAACTGTTTTATCAtgt
cactacccccgttttagtaataagttggagatttgatatttcacagaaac
gtgctaccaaggggtatttcgggtcccatatctcccgaaggacttttttg
tacgccttgaaatttaacaaacttctaaacctaaggttgaactaccactg
gtgtaaaaatgaacgttatagcataggtagaaaaaaagctcaatttttgc
aatcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTattctctgaaacaagcaa
aaaaaatttccataattatatttgactatcaaaagttacaggcattcttg
tttccactgccaattatatctggacagactttaaataAGTTTGAGCTTAA
TGgcccagtgatattcatattgggAGTTTATCGTGGCTTAGATCACaaga
gccaaacgtaaatctcgtgatccaagccacgataaacctccaatataaat
aaatctattATACTCTCATACTTTATTCATACGCGTTTACCCCGTTTTTG
TTataaaagaatttcaaagtATTCAAAAATAACTGCCTGAAGGTAGGGGA
GATAGCTTTTTTCTACTCCCTCCCGGATGGAGAGGGGGGGTGGTAATAAG
TGGTTGAAGAATGTCAGGAATGTGCGGACCGGACCCTCAAAAACCGGACC
CTCAAAAACCGGACCCTCAAAAACCGGACCCTCAAAAACCGGACCCTTAG
TAGAGAGTAATTAAGTGCCATATTCATGATaggcaccattgcaatgtctt
ccacgaacccaacagctgattggttgaaagtgacgtattgattgatatta
cgtcactttcaaccaatcagctgttgggtccgcggaagacattgcaaagg
tgcatatcatgaatagaagtCTTTGATATGACCCATAACCTTGAACAACG
AAGCCGAGGAGATTTTAATAGCTAAATACGTTCACGTTTATTCTTTAATT
TCAGATTCGGAAACAACGTGGATTCAATCGAGTAATATGGCTGTCACCAC
AGGTAGAAAAAACTTGTTGGATCAGGCTTTCCATATTAACGAAATTGTGT
CCAGTTTTAGAGTTATCTCATCGGCTATTTTCATTTTGGTTTGAAAGAAT
CGaacgtaaaaaaagaaaacagcaTGGTGAAATAGGGTAGACTAGTCGAC
AACTGGACGGGTTTTACTGGGAATCTGTAGTCCACTACCTTAAGTTTATT
AATTTTGGTGGTATCCAATTTGGTAGacaaaaacaaagttttaactTCCG
GATTTTCTTACGGCTTAAGCCATAGCCTTTAGAGTGCATGCATACCAGCG
cggagtatcagaatctgctcaGTAAGAGTGTCAGTTGACAATGCCTTAAA
ATATATTACCTAAACTTGTTACGTCGCGAACGATAGTAATAAGCTCTTGG
TAGCAACAAttgataaacaaaaatttcaggtCACTGTTTTAGCCTTTGCA
AATATCGACTCAACATTATCCACTTTCGTTTTTAGATCAACTTTATATCA
TTGCTTCAGTCTTGGTTGTTCTAATTCTCATCCTAATcattgcatatctg
gtctggtATTTTTACTACCAAAGACGCCATGGTAAAGGATTCGAGAAAAT
ACCTTCTTGTGAACGAGGTCAAGGTCACCCGGTTCTTAAAACTCCAACTA
TTGATATAAGTACTGTTAAATTTACTGTCCCGACTGGGCCGCCTGGTTCA
CGCCCCTATTCATGGGCGCCTGGTAATGATGATTTTGATGTTCATCGCGA
TGCTGGAACAGCAGGATCGAATAAATCGGGCGCCAGTGGTAGTTTAGGGC
GTGGATCATCGGAACAGAATTTAGGGTTACTGAAGCCCGAACTTTATGTG
ACGAACGAGGAATCCGATTACGAATTAGAAGAAGACTTACCACCAGGGAA
TATCGGTCGAGTCTGGTTCTCAATCGAATATGATGCATCATCAGAAAAAC
TAATAGTGAATGTTGACCGTTTACGGAATTTACCGGGGCGCCAACAACGT
TCCAGTTTAGCATTATCCTCTACGTCTTCGTGTGATCCTTTCCTGCGGTT
ATATCTACTACCGGACGAAAAACGGTATCTTCAGTCCAAAATGAAACGTA
AAACACGAAATCCAACATTCAAAGAAACTTTCATGTTTACAATGTCTTAT
TCGTTGTTAGTTGAACGAACTTTAAGGATAACTGTATTTGACGTGGATCG
ATTTATGAGACAAACAACAATCGGACATGTTTTGTTTCCATTGGAAAACC
TTGATATCACAACTCCAACGGATTTGTGGCGAGATGTTGAACGTTCTTCA
CAGGTAtatagtttttgtttttgtttttgtttttgctttttttttctcta
aaacgATAGTAAAGGTACATatactttcgcgggcagaaactttcaccATT
TTCGCGATCTTTGCCCATTTTCGGGAAAGTTTCTGCCAAGTAAGAAATTC
CACGAGGAATTCGCCAAAGTTTTTTCCGGGAAAAGTAcacttttttgcta
ttttatactcagttttattacttttttgcctgcaaaatgaaataaacatt
CGCGCTGAATTcgttccaaaattaaaattcgcgaaagtttctgcccgcga
aagtttctgcttttAAAGTATAGAGTGTCCGGAAAAAAGCGGAATGGAAC
GTATACAAATAAAAAACTTCACGCTTCAACCAGTTTTTACGGTCTTATTA
CTCCACTGTACAATGTTTTTAATCTTCACAGGTCTACAGTTTTTTTTCTG
GTTtggtttttcaatatttctctAAAAAGATAACATACAGAGTGTCCCAT
AAAGAGTTTCCCGTAAAAAAAGATATGAAAGGTATTTTTTGGGGAAATAA
ATTTAGACATCTAACTATAAAACTAACAAGTCACATATGTTATGAcaatc
aactctctctaattcgaacgcctgttacacgcttttttttataagaatac
actttataagaatgttCATGATAAAAATGGCCAAAAAATTAAGAATatgc
taagaatatcaccatcatggaattttgagacgtatgtactaaatgttaaa
tctagtctgaattaggatcctaacctaagaatgctgtaaaaatattttag
gataattttcccaaaaaaagttaaggaTATCcgtgatgaaatggatttac
accattcttatagaaaaaaagcgtgtattcaaaTCTTCCCATAATTTTTG
GTGtctagtttttctttttttctctaaaacgATAATAAGAAAAACATACA
GAGTGCCCCATGAAAAATTCTCCGTAACAAAAGATGTTAAAGGTATTTTT
ATGGGGAAAAGGTTCAGAAAGTTTAGAACTATCAAGAACAAACGActggt
tctcataaaaaactATCATTTTACACAGACTCAAAACCTCGTCCCCAGTG
GGaagaataccctacaatttcatccTCACTGgggaattgactttgatttc
atccccattcaaaattcaatgtaaaaattgcactccaaaaccatccccac
caGATTTTTTGACTTAGAaagaatagaaattttatccccattgggttTCA
ATAGCAAATTTTATCCCAACTGTGGGAagaagtttcaccggggctctgtg
agacaggggtgccaTTTTATTCATAATGGTGACAACTCATTGGATAATTG
ATTTCTTTAGATCTCAAGTGGTGCCGGAAGGTTACAAATTGGATTGACCC
ACTTCCCAGATATCAATCGTGTGGCAGTAAACATCATAAGAGGTCAGCAA
ATTGGTAACGAAGATATAACACTTCCAGGTATGTTTCCACTATCCGgaat
atatttatatttatttatatttcataaagctgaaaattactagtctgaat
cacagacctctatagatatacttcctatatgagaaacttttttcgctaga
ggatgagcggatgagcagaagcctaagaAATTACTGAAACACTGaattat
tgaaaaaacttttgcttttCGCCGTGAATTCAGCCCAAAATTCATGTCTT
TCCCATCGTTAGATTTAATCCGTTATTTTAAGGTTCAAATCTCTAGACTC
AAtagtaggggccactatgtcgcgaaaaagcttcccgtgtgcagcagctt
gtgcaaagggattttatgattaaatattgttccttgaatgtagagaagat
caaaatttgagtggtggggccgggtgtgaccacccgttgccatggaaact
gacgtcattggttactatggcaaccaaaacaaaaagtcgtcaaaattgaa
aattatttgttccattcgaaagagcatgaaaaactgataaagaaaaaggt
cacaatctatatctgaaaatgaatatatcaggagatattaaggaaataag
gcaaaatgacgtcataaaacgatgacgtcatcgaaaaataaaaatttgcc
aaaattcaaaaagttttggttttttggaaagaataccttccagtgaacat
aaaatattatgacgaaaaagtctgaaaatcctttttaagaagtcttttag
ccaaaatttatatttttaaattttgcctgtaatgtGCTGGGCTGCACGTA
CCCCAAGGCTACAACCTTTGacaggcaaaaattgaaaatgtcaattttgg
ccaaaagacatttttttaacgggtctgtgagaagggggtgttaatGAGAA
CCAACTGTATTTTGTATATTTCAGATTCTTATGTCAAAGTGACGTATTCC
GTATTAAGCAAAACTCATAAAGTCAAGAAAACTTCCACACAAAAAGCAAC
CAAAGAACCATTCTATAATCAaacatttgaattcaaaattgatCAACAGG
GTATGGAAGTAGCTTGTTTCAACTTTGAGATATTTCATTCAACATCAGGT
ATTGGAAAAAATGATAAAACGCTTGGATCATTCATAGTTGGTGGAGGTTT
GTGCGCTAGAGGTAAAGAACTTGAACATTGGACAAATATGCTTCAAAAAC
CACAAACTGTCGTTAAAGAATGGCATAACTTaaaaaattaaggaaaaaat
gattttttatggtcCTCGATTTGACTACTAGATTTAGGGGATTTCAGAGG
CGTATGAAATAccagaaaatttttccggccgatgACGGAATACCGGAACA
CCGAACGATACCAGAAACTCTAAAGCCCCCTATACTAGAAATATAATGAT
GATTTTTTGTGCACTTTCTATGTTtaagtttcttaatttttcaaaatctt
ttaagatttttttgtcacaataatttttactttttataaaaagggAAAAA
TGTTAAGCAATGTGGCTGGGTTGTCATCTTAACCTTTTCAGTAACATAAA
TGGTGTAAAGTCGGTTAAAGGTTTTTTAGATCCCAAaagcaaaatccaaa
aaaatcattttgactCTTTGGGTGATTTCAAAGTGAAATCGTATCTAAAT
CGTTCAAAATAATTCTCGGTGAAAGGCTCAGAAATTCAACAATATTTGTT
TATCAAGGGAACTAGATTTGGCGAACTGCAAAAAtccccaaaaaaattaa
aattgatgactgggtaattttttaattttggtgaatttattGCCAAATTC
CTCAAAAATTAGTGCCTTTGACATAGCTTGACATAGCTTTTCACCGTGAA
GTTTTCCAAACAGTCAGAGGCAATAGAGGCTCATATCTGAAAGAATTTAA
CGTTTGAAAGTCCTCTTCCcctgaaatcaaagatgaattttgaccaaatt
gattttttttgggggagggggtattttaaaatttgaatttaaaacattAG
TGGCACATGTGAAAGGATGAAAACTTTATGATTTAAACCTGCTTTGAAAT
GGTTAGGATGACACAACATCACTTCAAAATGTAAATACGAGATACTATAA
ATTTAATTTGAGTTTTAATTATCATATTGTATTACAGTTAGAAAGTTTAT
ATCTTGCCGACGTAGAAATTTGGTATGTGTTGATACGTTAGAACTAAAAC
CaaagctttttaaaatcatTGGTATAAATCACACCAAACATAAGTGGAAG
TCAAAATTTATTGGTTCTAAGCGACATTAGCGTGTAGTTCGAAAGAATAG
TAATTCAGTGGATTTAAACAAGAACTCTAATTAGGTCCCGAATAAACATC
TCCCCCCCCCCACTTATTAGTTTTTGAAAATATTTTCAGCTATCACAAGC
TGAATTGCTCTAAATAGCTTTAGCTTATAATTACCTTATTTTGGGCTTTT
TTTAGGTACAATTTCCAACCCCCCGGtttattagattttgaaaataaatt
cggATCCCACCCCCTGTTTTATTCGGACCCACCCCCTCCTACTAGTTTGG
ACCTTAGAGTTAACGACTTTGTTTAAATGTTCACATAACTTTAATAGGAT
TCTATAGACGttaaatcaatgtttttttgtcGTTATGAGTCGGCTGGGAT
GGAATTTGGTTATCAAAGAgtcccagctggtacacaacgttgtttcaacg
tttattctAAAGTCcgcaacgtccatataacgtcagATTAGCGTTGTCTA
TTCTGCAGGAACTGAGCATTGATTAAATGATATACTTTAGTTGTTAGAGA
TAATTTANAATCCTATTCTGCAGGAACTGAGCATTGATTAAATGATACAC
TTTAGTTGTGAGAGATAATTTATTAAATTTATGTATGTatgaatttgaat
tatgaaACTTTAGATGTGTTTATATTTAAAATCAATTAATTCTGTCATTT
TCTGTCGAGAAAGAATTACCTGGAAGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029295XLOC_029295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045832-exon-scaffold_102-1491911889:140859..141128TCONS_00045832-exon-scaffold_102-1491911889:140859..141128Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1510915933:140859..141128TCONS_00045832-exon-scaffold_102-1510915933:140859..141128Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1575043694:140859..141128TCONS_00045832-exon-scaffold_102-1575043694:140859..141128Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1491911889:145313..145360TCONS_00045832-exon-scaffold_102-1491911889:145313..145360Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1510915933:145313..145360TCONS_00045832-exon-scaffold_102-1510915933:145313..145360Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1575043694:145313..145360TCONS_00045832-exon-scaffold_102-1575043694:145313..145360Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1491911889:145844..146661TCONS_00045832-exon-scaffold_102-1491911889:145844..146661Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1510915933:145844..146661TCONS_00045832-exon-scaffold_102-1510915933:145844..146661Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1575043694:145844..146661TCONS_00045832-exon-scaffold_102-1575043694:145844..146661Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1491911889:148019..148136TCONS_00045832-exon-scaffold_102-1491911889:148019..148136Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1510915933:148019..148136TCONS_00045832-exon-scaffold_102-1510915933:148019..148136Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1575043694:148019..148136TCONS_00045832-exon-scaffold_102-1575043694:148019..148136Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1491911889:149033..151088TCONS_00045832-exon-scaffold_102-1491911889:149033..151088Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1510915933:149033..151088TCONS_00045832-exon-scaffold_102-1510915933:149033..151088Clytia hemisphaericaexon
TCONS_00045832-exon-scaffold_102-1575043694:149033..151088TCONS_00045832-exon-scaffold_102-1575043694:149033..151088Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:140859..151088 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.30424	0.992522	0.330084	0	0	0	7.43856	8.4299	3.17079	3.56754	3.56383	3.0806	2.98374	2.32508	1.37852	1.63452	4.87477	4.55038	5.20814	7.29081	5.87122	7.85106	5.43363	7.08861	3.76204	5.68352	2.008	1.27988	4.03468	5.40167
Blast
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BLAST of TCONS_00045832 vs. Swiss-Prot (Human)
Match: SYT15 (Synaptotagmin-15 OS=Homo sapiens GN=SYT15 PE=2 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 1.473e-55
Identity = 113/307 (36.81%), Postives = 173/307 (56.35%), Query Frame = 3 
Query:  654 LGLLKPELYVTNEESDYELEEDLPPGNIGRVWFSIEYDASSEKLIVNVDRLRNLPGRQQRXXXXXXXXXXCDPFLRLYLLPDEKRYLQSKMKRKTRNPTFKETFMFTMSYSLLVERTLRITVFDVDRFMRQTTIGHVLFPLENLDITTPTD--LWRDVERSS-QISSGAGRLQIGLTHFPDINRVAVNIIRGQQIG-NEDITLPDSYVKVTYSVLSKTHKVKKTSTQKATKEPFYNQTFEFKIDQQGMEVACFNFEIFHSTSGIGKNDKTLGSFIVGGGLCARGKELEHWTNMLQKPQTVVKEWHNL 1562
            +G + PELY   E+     E D P G +GR+WFS+EY+  +E+L+V + + ++L    +          +C P ++LYLLPDE+R+LQSK KRKT NP F E F+F +S   + +R L+ +V+ VDR  +   +G VLFPL+N  +       +WRD+E  S +  S  G LQ  L++   ++R+ V ++R + +   ED  +   +VKV+    +K  K KKTS    +  P YN+TF FK D   ++ A  +  +  +    G   + LG  +VG  +  RG+ELEHW  ML KP+ +VK WH L
Sbjct:  124 VGAINPELYKFPEDKS---ETDFPDGCLGRLWFSVEYEQEAERLLVGLIKAQHLQAPSE----------TCSPLVKLYLLPDERRFLQSKTKRKTSNPQFDEHFIFQVSSKTITQRVLKFSVYHVDRQRKHQLLGQVLFPLKNETLVGDCRRVIWRDLEAESLEPPSEFGDLQFCLSYNDYLSRLTVVVLRAKGLRLQEDRGIVSVFVKVSLMNHNKFVKCKKTSAVLGSINPVYNETFSFKADATELDTASLSLTVVQNME--GDKSQQLGRVVVGPYMYTRGRELEHWDEMLSKPKELVKRWHAL 415
The following BLAST results are available for this feature:
BLAST of TCONS_00045832 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT151.473e-5536.81Synaptotagmin-15 OS=Homo sapiens GN=SYT15 PE=2 SV=... [more]
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