|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045833 ID=TCONS_00045833|Name=TCONS_00045833|organism=Clytia hemisphaerica|type=transcript|length=1010bp
CCGTGCTAAGACATCGACCCtgggtgtaaaatttcaaagcctaaaaatga
ttatttatgattttattctaaatttaccaaaaagagcaattttttgactt
tataaaaatgtcacacaatttttgactgTGTTCTCGTCTAAATAAAGGTA
AATAAATATCTTGTCTTTTTTAGAACAATATGTACAACAGAAAATGTTTG
GTGTccgaaaaataaaatacaacaCAAGTTTGTCCGAGAAAAAGTTTCCC
AGTTGAAAATGGTGTAAATGCCTTCTCGAAAAGGAAGACAATGTATGTAT
CAAAGTTCCATGATCGACCGGATTTCGAAATATGGTAACTAAGATTTCAT
TATAGTGAATGGTGTATCAGATGTCAATACCAACATAATAAATACGTCAT
AAATTCAATCCAATTGATTCTATTCGATTCCAAGTTGATGTGAGAAAAAC
GTGCAAGGGATTAGGAAGGGGTTTCAGTAAGGCGGGAGGGTGTGGGTAAA
GGGAGTATCAAAGCATCCATGTATTGCTTGAGAATCATTAGAAATGAATA
AGAACTAAAGGGCAGTGTggttgacaaattcaaaagttcgAGCCAGTAAA
TTATGTTTCAATATTGcacgtattcatgatATTGGTAGGTGCAGTCTGTC
TGTAAATATCCGTTGAAGGGCGGGACAATCGGATAGATGAAAACGTTCAT
CTAGCAtgtcaaacaaaacaaaatctttggTCATTTACATCAATGTAAGG
AGagtttctcaaataaaaacagaaGAATTTCTAAAAATCATCATCGTCAG
AAATGGCGGCTTCTTGAGGTTGAACGGCAACGCTTTTCTCATCTTTCGGC
TTCCGTGACAATTTCCTCTCTTTCAAAGCTTTCTCCCAAGCTACTATTTC
TTTTCCATCCTCAATGCTTTCAGTCGATTGGTCTAAAGTGACGTCACCTT
CACTTTTAGTTTCCAGATCTTCTTCAGTCGCTGAAATCGAGGATTCCTTC
GGGAGCAAAA Run BLAST on NCBI transcript from alignment at scaffold_102:182595..183766+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045833 ID=TCONS_00045833|Name=TCONS_00045833|organism=Clytia hemisphaerica|type=transcript|length=1172bp|location=Sequence derived from alignment at scaffold_102:182595..183766+ (Clytia hemisphaerica)
CCGTGCTAAGACATCGACCCtgggtgtaaaatttcaaagcctaaaaatga
ttatttatgattttattctaaatttaccaaaaagagcaattttttgactt
tataaaaatgtcacacaatttttgactgTGTTCTCGTCTAAATAAAGGTA
AATAAATATCTTGTCTTTTTTAGAACAATATGTACAACAGAAAATGTTTG
GTGTccgaaaaataaaatacaacaCAAGTTTGTCCGAGAAAAAGTTTCCC
AGTTGAAAATGGTGTAAATGCCTTCTCGAAAAGGAAGACAATGTATGTAT
CAAAGTTCCATGATCGACCGGATTTCGAAATATGGTAACTAAGATTTCAT
TATAGTGAATGGTGTATCAGATGTCAATACCAACATAATAAATACGTCAT
AAATTCAATCCAATTGATTCTATTCGATTCCAAGTTGATGTGAGAAAAAC
GTGCAAGGGATTAGGAAGGGGTTTCAGTAAGGCGGGAGGGTGTGGGTAAA
GGGAGTATCAAAGCATCCATGTATTGCTTGAGAATCATTAGAAATGAATA
AGAACTAAAGGGCAGTGTggttgacaaattcaaaagttcgAGCCAGTAAA
TTATGTTTCAATATTGcacgtattcatgatattcatgacgtaatgttttc
tacagaaATACCCCAGTTTTAGCCAGTAGCGGCAAAtctaaactagacaa
aagttgtataaaatttgccactactggcaaaaaccggggtctttccgtag
aaaacattacgtcatgaatatcatgaattatcatATTACGACATTGGTAG
GTGCAGTCTGTCTGTAAATATCCGTTGAAGGGCGGGACAATCGGATAGAT
GAAAACGTTCATCTAGCAtgtcaaacaaaacaaaatctttggTCATTTAC
ATCAATGTAAGGAGagtttctcaaataaaaacagaaGAATTTCTAAAAAT
CATCATCGTCAGAAATGGCGGCTTCTTGAGGTTGAACGGCAACGCTTTTC
TCATCTTTCGGCTTCCGTGACAATTTCCTCTCTTTCAAAGCTTTCTCCCA
AGCTACTATTTCTTTTCCATCCTCAATGCTTTCAGTCGATTGGTCTAAAG
TGACGTCACCTTCACTTTTAGTTTCCAGATCTTCTTCAGTCGCTGAAATC
GAGGATTCCTTCGGGAGCAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045833-exon-scaffold_102-1491911889:182595..183224 | TCONS_00045833-exon-scaffold_102-1491911889:182595..183224 | Clytia hemisphaerica | exon |
| TCONS_00045833-exon-scaffold_102-1510915933:182595..183224 | TCONS_00045833-exon-scaffold_102-1510915933:182595..183224 | Clytia hemisphaerica | exon |
| TCONS_00045833-exon-scaffold_102-1575043694:182595..183224 | TCONS_00045833-exon-scaffold_102-1575043694:182595..183224 | Clytia hemisphaerica | exon |
| TCONS_00045833-exon-scaffold_102-1491911889:183387..183766 | TCONS_00045833-exon-scaffold_102-1491911889:183387..183766 | Clytia hemisphaerica | exon |
| TCONS_00045833-exon-scaffold_102-1510915933:183387..183766 | TCONS_00045833-exon-scaffold_102-1510915933:183387..183766 | Clytia hemisphaerica | exon |
| TCONS_00045833-exon-scaffold_102-1575043694:183387..183766 | TCONS_00045833-exon-scaffold_102-1575043694:183387..183766 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_102 | supercontig | scaffold_102:182595..183766 + |
Blast
The following BLAST results are available for this feature:
|
