TCONS_00045854 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045854
Unique NameTCONS_00045854
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3140

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045854 ID=TCONS_00045854|Name=TCONS_00045854|organism=Clytia hemisphaerica|type=transcript|length=3140bp
ATTCTTTGCTGGTGGACAGTGGAGGCCTTAGACCAAAAAGAAACTCCATT
TTGCAAACATCAATCGTTTGAAATGAAAGTCTAGCAAATTTGACTATTta
aatgaaaatgagaaaagGGATTGTCCTTCAAACTGTCTCAGAAAGACTTC
AACAAATAACCAACAATAACTTCATGTCAAAAGATATTTATGCTGATCTT
ATCGAGGCTGAAGAAGAATTGGAAGAGCCAAAAAGATTATACAACCAAAA
ATGCATTTTGTATAACGAGATCAAAGAGATTCTCCTGGAGAATAACTATG
GCCTCGACGATGAACAGTTCGGAATGGAGGAGAATGCGGAACAACCAAAc
ATCTTCAAGATTGTCTGTGATATGATGAGTAGGGCTGAATGCAAGAACAG
TTTAAACATCTCAATGAAAGGGAAGCCAACACCACAAGAAAGTCTTTTTG
GTTTGACCAAAGATGATTTTGAATTGGAAccaagaaataagaaaataatt
caTCAGAACATTCAACAACAGTGTATTCCACTCATGGAACAACATCTAAA
GAATAAATGTATCCAATTCTACCAAATCTGGAGTCCTTCAAATAAGGAAA
GTGAAGGTTTGGTTCTTGCTAAAGCAAACCAATTAGCATTGAcaataaat
aaagaaaagaagaagCTGAGCGAAATGAAGAAACATTTGAAAGCAAAGGA
AGACGAGTATAAAGAAttgtgttttcattttgatcAGtccTTATCATCAC
TCGTCAATGAACTAGAGGAGAAAGTTTgcagtttgaaagaaaaaccACAG
ATGTCTAACATCAAAATTACCAGTGATTGGATCGACACTAAATGCAATTA
CATTTTAGCAAAATTGAGGTTTATGAAACTTCACATCCTTTCGCAGACTT
ATAATGAAGAAACATTACCAGCATTAGAGAAAGTCAGATACCACTTGGCG
GATGAGATGCGCCAAACggaaaaagatttaaagaaGACAAAACAAGCAGT
TTTCATGTACGAATCTATCGGCGACACATTCACACAACTCTTAAAACAAT
ACGCCCAACTCACGACGGAGCTGGACAATAAAAAATGGGCTTTATCTGAA
CTTAACAAAGACAAATCGTGACCCATGAGCCTAAAGAAAGACCtcgtttg
aaaaaaatgttggatTACTACTAGATGTATGTTGTTTTGAATGCATTTAA
AAAGCATACCACTTTGATTCGATAGGGAGCTGTCTATTGCTGTCTAGATA
AAAAAGACAAATCGTTTCCCACCGTGCTAAAAAAATCAATGGCCTTAGAA
GAAATGCTAAGTTATTGTTGTTCAGTGTTGTATGGATTTCATTTAGAACC
AAGAAAAGCTCTCACGGCTTAAGAAGGAAGCCGATTATTGATTCCTTCAT
TATTGTTACGTTGAGAACTTTAAAGTACTATCATAGTATTAACCCTTACT
CTAAAAGTGATTGGAGACTGAGTTTCCAGGGACACCTTTGAACTCTAAAA
GAGTATAAGGAGTTTGATGTCAAATGTCTCCACGAGAGACTATTTCAGAC
GAGATCTTAATTCTACTCTTTTACCGAAAATCAAATACATAATCAGTGCA
AGTAAAGTACTTCTACTAAGATGTCACGTGGTAGGTTAATGTTTTGTTAT
GTAAAAAAGATTTATCGTTGGAAATATGATTTTATCAAATGAGAGTTAGA
GTTAAATAATCACAGCGGAGAAGTCAATTTGACCGATTAAAAAGTCTAAA
TAACATGATCTGATTTATATACAGTATGTTTACTTTTTCTCTATCTTTCC
TGAAAGGGCGTGTTTAGTGTAAAGCGGGCCTTACGGatgtaaacaaatat
ggtagcGTAACTGTGATGATAAgtagtttgatttttttatcttatGTTTT
GGATATCTAAGCATTTTCTGTTTGTAATAGaaaaaaattaacacaaaaca
taaaaaaaaatacttgtaAATAAAGATTaagattttaaattcaaaatgtc
cTGGGTTGCATCTGGTATGTCCATGTTACCTGGTCTATCGCCAAGACCTC
AACATCACCTTGTAAACAAAAAGGATTTCACAGAGAAAGTTGAATCTACA
AGCAATGCAACGTTTGTTAGTGTTCGTGAATGTGAAAAAGGTAATATCGA
AGTGACTGGCAAAGTTGGGAAAATTTCCTTAGAGCGTTCTAATGGATTGA
AATTATCACTTGATAATCCTGTGGTTGGTGGAGTGTTAGAAGTGATCAAA
TGTCAAGATGTTTACATTAGATTACACCAAGAAGGGGAGGTGCCAACTTT
CCAAGTAGATGACAGCTCAAATGTCACAATCGAAATCTGTACACGATCAC
AAATCGAATGTCTCTATTATATCCGATGCCAGGGTTTAAAACTTATTCTC
AACGATGCAGAATTAAGTGATGATTCATCTTTCCAATATGAAATACCTAC
GGAAGAGGCACGTGCTAATTTACAACAGATTGCTCATTAGAGTGCTANAT
CTTTCCAATATGAAATACCTACGGAAGAGGCACGTGCTAATTTACAACAG
ATTGCTCATTGGAGTGCTACCAGCGCTGACGCCTCGTTCGTGGCGGAGGG
CGTTGTACGTGATGGCGTTTATCCAACCACGGCGGAAATGAAACGTGCAT
CAGACGCCAAAAAGCAGCAAATGATCAACGGGATGGCTTCAATGCTACTT
GGTGGAATTGATATTAAGAAGCCAGAACCACCTCAAGATGGTAAGTCAAA
CCAAGGCAGCACTGAAGATGAAAACGAAAAAGACAAACAATTAAATCTTC
CTGATTAAAAAACTTTGCTTTCAGAAATGgagcgtttttttataaggatc
ttttcatgtttttttgtcTACGCTTTTCTCCAAGATTATAGTGCAtgcat
tttttgtattttttttttatattgatttttatTAGGTGCTCTTTGTTACA
CCCGCAAAAAGGGTGTACCTTACAAAGAGTACGAATTTTTACGCTttaaa
cgaaggaagatatgacgtagcggAGAAAAGAAATATATACCACTAAATCT
GGGCCATCATCATTGATTTTCTCTTATCATCTCTCAAGTTCATAAATGTA
ATATGAGAAGAAAACTTAATCTTATtcaccaaaaattttt
Run BLAST on NCBI

transcript from alignment at scaffold_102:447715..462074+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045854 ID=TCONS_00045854|Name=TCONS_00045854|organism=Clytia hemisphaerica|type=transcript|length=14360bp|location=Sequence derived from alignment at scaffold_102:447715..462074+ (Clytia hemisphaerica)
ATTCTTTGCTGGTGGACAGTGGAGGCCTTAGGTAAGagatgttaaatttt
tttttttgaaaaagctgGTTGTTTCGTTGTTCCACATATATATACCagat
tttgtttataaaaacatGCTCAAATGTCATTGAttgatggaagattcagc
cattaaaaagtcttgagttgagtatcgatccttcgttatGATCCAATTtc
aagctagtatttcaatcgagtatatccaGACGATCTTGATCGaatggaat
cgacgatcgaaccagtcgaacaacaatcgaacgcaatcgacagattgaaa
ttcgattgtcgaacgcaattgaatctcaatcgaacgtcaaaaaattctgg
gtaatattcgattcgtccgattgttgttcgactggttcgattgtcgattc
cgttcgattgagatcgtctggctttattcttgcagcttcccaacatccaa
gctctcaaatatCACAAgctgaatgaaattactttcgatttcccgtagaa
attatgcgatgaacaatccgggggtcaatgtaatgaatcgacgatcaaac
gcaatcgaacatcaatcgaacgcaatcgaatatcaatcgaatctgaaaat
tgtggtaatattcgattgaaattcgattgggttcgacataaaagataaaa
gataaaagatCAATGATACATGAaaaaaactcgttaaataagtcaatttg
taagttattttcaaattgattgcatgaatttaatacctctttttaggtgt
tttttacacttttcgaaaagtgaattttgactttaaaagctcataagtag
agaacaagttggtcaaatttaaaaagtgatggctcaaattttaatttagg
atatctactttctaaatatcaaaactccaagcactttgggacatttgttc
gacctcaagacgtcgggaaacgtctgaactttttcgtgggtcacccggta
tacaAGTGCTTTCTAGCAGGTGCTCCCTTCTCTGCTCACTTGGacattgt
tttaaaaagttatgtCATAAGAAATCCACGGAATcttcagaaaatttgaa
aatgaagatgtaaaataaaataaattttatactttttttagaaCTTAAAA
ACTGTCTTTaatttcaaaagtgttttcagatttttcaagacttttgatcc
caaaaaaattggaataattgaaaaatatatggAATCAGTATATACATGGT
TTCTGTTTAAGTGCTTTGTCAGTCTCcccttaaaatgcaattttgccctt
aaagaaaactgccccttaaatcgaacaaaaattaccAGTACCCCTTGTTA
GAATGCCCCCTccccttaaaataaaaaagcagCCCCCCTTAGATTACAGA
AGAGAGGGTGCAGATTGTAAGCACAGAAACGGGAAAGAAGATATTGgatt
aaagaaaattattatcaaataAACCAGAGACAGAACATTTGCAATTCAAT
CAACAATTTTCGAATTTTAGGTCTTCCTTTCTTcttgttttgatagattt
ttgCAACCCTTGATAAAAACTCCCcccttgtttaaaaaaaaatacaaaat
tcccccttttttttgaaatttctcattcttattttcaaagatatttttcc
CAAAGCTTACATCAGCCCACTTAAAGTTATCTTTCCAACTTTGCCTTCAA
GAAAAGCAACTGACTGCTATTTTTTAGGAACTGTTTGGAAATAGAATAGA
CTTTACTTTCTGGTCATTCATTTGTTgattatttgacaaaaaaacagcct
tccAGAGAGTTTTGCAGATGCCAACATTTTTAACCCCTCTACTCTTATTT
CTTTGACCTTTAATAGACCAAAAAGAAACTCCATTTTGCAAACATCAATC
GTTTGAAATGAAAGTCTAGCAAATTTGACTATTtaaatgaaaatgagaaa
agGGATTGTCCTTCAAACTGTCTCAGAAAGACTTCAACAAATAACCAACA
ATAACTTCATGTCAAAAGATATTTATGCTGATCTTATCGAGGTAAATGTT
CATCAACTATATATAATTTTGAGTATAATTCTTGTGTGTGTAGATTATTA
CTACTTAAGGTATTAGAATTAGAAAATCTGAAAGATCAATTTTCTTAGCA
AAAATCTCTATTCTTCTGTTTTTCTATAATCCTAGtaagaaagatttttt
aattttcctaccgggtgacccacgaaaaagtataagagtttggagggtaa
ctgtgtccgaaaaaaaattaattttaactaaattctcttttcgtggtaaa
gaggaaaggcaaacttaaattttgatgtatcattttttaatttttgaaaa
gtagttatcgagatatggaggtataaagtcaaaattcattattaaaaaca
gtcaaaaaacgtcaaaaaagacagtatcaaattaattaattaattaacaa
ataaaaaaagacatcgAGGGAGAAGcatattttaatttcttttaccGGAA
GGATAACAAAGGTTGACAATTCTTTTTTAATCTTATTTATTCATTTGGAA
AAGCACGACCCCTAGCATTAATACAGAGACGAGCCCTAGCCCTTTTTTCT
TAacgaaaagacaaagaaatagCAAATGATCAAAGGAAAGATGTTTGTTC
TGATACAAATTTGATAGTGTctctttgacattttttaactgttttttata
atgacttttgactttatacttccatatctcgataactacttttccaaaat
taaaagatggtacatcaaaatttaagtttgctcTTCCTCTTTACCACGAA
AGgagaatttagttaaaattcattttttttcggacacagttacgctccaa
actcttatactttttcgtgggtcacccggtatgttACAAATATTTGGGTT
TTTAAGTCAATATACATATTGCTGTATTCATTGATTGTAGGCTGAAGAAG
AATTGGAAGAGCCAAAAAGATTATACAACCAAAAATGCATTTTGTATAAC
GAGATCAAAGAGATTCTCCTGGAGAATAACTATGGCCTCGACGATGAACA
GTTCGGAATGGAGGAGAATGCGGAACAACCAAAcgtaattttttaaagaa
atctttttcttttcgcaACCTTTTGGAGGTAGTCTAGTAGACTTCTGAAA
TGGTCTGATTTGACAAATACTTGTTTTTCAattgttgatttttgaaatac
tttaaggaactttgttttttcaaaacgaGGTAGACACTTTGAGGCAGCCT
GGATGCTTTCAAAAGTGATTGGTTATGATTTGGGTTAGAATCTTTTTGGC
ACGATATCTGAAAAACGTGTtttcttggaaatattgactaaCTTTTCACA
ACTGTTACCGTTAGATCACCGAATAGCTGGGTAGAACTTGTAAATTCTCT
GCTCATTTATATCTCATGTTTATTCATTTTAGATCTTCAAGATTGTCTGT
GATATGATGAGTAGGGCTGAATGCAAGAACAGTTTAAACATCTCAATGAA
AGGGAAGCCAACACCACAAGAAAGTCTTTTTGGTTTGACCAAAGATGATT
TTGAATTGGAAccaagaaataagaaaataattcaTCAGGTACCTTTTATT
AATCACCACAACCTGATTTCTATAATCAACTTGTTGATTTTGTTCTGCTT
tatcagaaaaaattatttattttctgGTCTTACAAAAACAAAAGGGATTG
AAAGAATTTGTTAGCAGATTCTAAACCACATTCAACTTTGGTGAATCTTG
GTATGATATTGTTCGCTATTTATCTGATGACTGGCTTCTCCTTACAGAGG
ATGTCCGGTTCTGTTGAGCGGTCTAGGAATCGTCTCGTTAGAACCGTCTT
ACGCTGTAGTTTTTTATACTGCCCGCCAGATTGCGAGAGACTAACACACA
GTTTTTCGGATCAAGTGCGTTAATCTGGTGTGAACCACTTGGGAACGAGG
CAAGCGCACTCTCAACTCATCCGCGATGTATTGTGGAATCGATACCTATC
ACTGTCAACGACAGGCTTTTTGAGTTTCTGTCAACCCAATTCCTCTCGTA
TGGCATGGGTTGGCCCGGgtaaggtacattcacttgccaggTGAATCACA
GCAACAAGTGGGAATCGATCCCCGACCTTCTGGACGGGAGTCAAgattga
taaccactacactaccgCTGTTTATCTATGATTATCACAGCTGACATTTT
CTTTTTAGAACATTCAACAACAGTGTATTCCACTCATGGAACAACATCTA
AAGAATAAATGTATCCAATTCTACCAAATCTGGAGTCCTTCAAATAAGGG
TAATCATGTCTTCCTTTTCTCTCTGTCATGGATTCAAATTCCAGTCACTG
CTGTGAAGGATTAAATTTGGGGTTATCAACGTTCTTCctttaaaggaaaa
ttattgGTCATTATAATCTCAAGCaaattatatttgtttatattacattt
ctaagtaagtaagtaagtaagtctgcgaccgcagttcGGAGGCGAACGga
aggctcctcttttgatagctatctacccgaaggtaggggaaggCGCTAcc
ctttctccctggatttctccacttacccttgatccttctcttaattgctg
agcatcaagcagagaggcatcaagtactattttgagaatctttggtatga
cccggctgggggttgaacccacaaccttgcgaaccgtagcttGATGCCCT
ACCACTGCACCACGGTCCACATTACTAGGACAATACTGTCTTTAGTTTCT
CTAAGAAATCTAATTTTCGTTATATTTTTCAAGGGTTGTACACTTCCTAA
TCAGACATCAACACCAAAAGAAATAGGAATGTAAATCATTTAAAGTAGTT
Ttagctttaaaggttttgtttttaaataataagagtgatatcgtttgctt
actcatcactttcacaagctttttcacattgatttGACAAGGATGTGGAC
CAACATTggtcagaaaaaagaaaataaaaacattttttgcttatatcagc
ataataaaGCAATAgtaagacactgtcctgatatgaaatatgcgcctgat
atgaaacgagaacacttatgtaaatATAAAACCTTTCTTTCTTTAGAAAG
TGAAGGTTTGGTTCTTGCTAAAGCAAACCAATTAGCATTGAcaataaata
aagaaaagaagaagCTGAGCGAAATGAAGAAACATTTGAAAGCAAAGGAA
GACGAGTATAAAGAAttgtgttttcattttgatcAGGTATAAAGACTTTG
ATTCATTCTAGAAGGCTCTCAGGTGTTTAAAGAATACGGCGAAGCAAGTT
TTAGGCCCACAGACGATGAATTGTTTGAATGAGAAGTAATTGTAGAATTC
GCGGAATTCGTGGATTTGGTTGtcatcttcaaaataattttttgaatatC
ATTTTTAAAGAAGCTCATTAAATGAGCATTTGATATTCAATTGTATATTT
TAAAAACTAAATACACAAAAAATGTTACCGGTTTGATTTTGATACCTGTG
CTTAAAATTAGGCCATTTTTGGGTAACTTTTACACCGGGTTATCCAACGG
GACGGATCTGACCGGTCAGACTGCgaaactttattttatttttcagtccT
TATCATCACTCGTCAATGAACTAGAGGAGAAAGTTTgcagtttgaaagaa
aaaccACAGATGTCTAACATCAAAATTACCAGTGATTGGATCGACACTAA
ATGCAATTACATTTTAGCAAAATTGAGGTATTATGTACTTCTTGTTTATT
CTTCACGACTTTAAGAAATCTTTGTATTAAATTGTATGTGATACATCAGG
CACGAGTTACCTTGTATATCAGGTACAACGGTTTTGGCTCTTATAAAATG
CATCATAGATATGGTAGTCACTGCCTAGAATCCTAGGGACGATTCGCTCG
CcatattaagcagatattgGACTAGAAAAATTGGATATTAAATTCGAAAT
ATTTAGAAAACGTCACTTTGACGCCGTTTTCCTTGAGTTTTACAGTGAGA
AATCGACCACATCCGCTTGAAAGGCCTCTATTATATATCGTTTTTTCTAT
TGCCCggtctttttactttttcccaTAAAGAAATTGCTGTACCTCTTTTG
GATTACCCCTTTCAGAAAGGTTTTTGAATAGAATTCTTATTTCGAATGAG
CCAACTCCGGATATTGTTGGCACGGGACCTTAAGATTGCCCCTTACTAAT
TACTAAAAACGGgaaattttaaatcttattATTCTAGGTTTATGAAACTT
CACATCCTTTCGCAGACTTATAATGAAGAAACATTACCAGCATTAGAGAA
AGTCAGGTAAGCTTTTCATTACACCACAACGTAATATTTTTTATAGTAAG
TAAGTCCAGACTCTTTCAATAGCTATCTAACTGgaggtaggggagggtgc
cactcttaCTCTCtcggattgctccacttacccttctCTAAAATGTTGAG
CATCATTTTGTACTAAGTCTTtgaagtctttggtatgacccggttAGAgg
ttgaacccacgaccttgtgcaccgtagctggataCCCAACCACTGCAATA
CGGTCGTTATATTTTTATAGTGTGTTAAAAGACTCATGGATTATCAGATG
TTTGATATTATATCCAGTCgtttgttacttttttttttgtttatttccgA
ACCGATTGGACCTGTTTATTTTAGAAGTTATTTTCGCCTGTCAAGCTTAT
TTCTAGACAATATTGAATATGAGGTTTCACTATCGACCCAATCTTGCAAT
AACTTGCGATGAGGTTCCCCTGTTCAATAAAATATAAGTAAGAGTTTTTC
CATCACTGGGCTCCATTTATTGAGCAAATTTTTCATATAATAAGTTctag
tactcttaggttccaaataaacgggggggggggctaattgccgggggggt
tggaaattgtacttctgaaaacccaaaattaaggtaaatttaggctgaaa
tcaggctatttagagcaaaataaggggctttctctttgacagctgaaaat
attcttaacaattAATAAACGAGGGGttctaataaggtccggggggaggt
tttggaaaattgtcgaaaaattaacaagcgggggaggggggttatttgga
acctaagagtacataaAGAAGGTCTCTAAACACTTGCAGAAATCTCCGAA
TCATCTTTTTCAGATACCACTTGGCGGATGAGATGCGCCAAACggaaaaa
gatttaaagaaGACAAAACAAGCAGTTTTCATGTACGAATCTATCGGCGA
CACATTCACACAACTCTTAAAACAATACGCCCAACTCACGACGGAGCTGG
ACAATAAAAAATGGGCTTTATCTGAACTTAACAAAGACAAATCGTGACCC
ATGAGCCTAAAGAAAGACCtcgtttgaaaaaaatgttggatTACTACTAG
ATGTATGTTGTTTTGAATGCATTTAAAAAGCATACCACTTTGATTCGATA
GGGAGCTGTCTATTGCTGTCTAGATAAAAAAGACAAATCGTTTCCCACCG
TGCTAAAAAAATCAATGGCCTTAGAAGAAATGCTAAGTTATTGTTGTTCA
GTGTTGTATGGATTTCATTTAGAACCAAGAAAAGCTCTCACGGCTTAAGA
AGGAAGCCGATTATTGATTCCTTCATTATTGTTACGTTGAGAACTTTAAA
GTACTATCATAGTATTAACCCTTACTCTAAAAGTGATTGGAGACTGAGTT
TCCAGGGACACCTTTGAACTCTAAAAGAGTATAAGGAGTTTGATGTCAAA
TGTCTCCACGAGAGACTATTTCAGACGAGATCTTAATTCTACTCTTTTAC
CGAAAATCAAATACATAATCAGTGCAAGTAAAGTACTTCTACTAAGATGT
CACGTGGTAGGTTAATGTTTTGTTATGTAAAAAAGATTTATCGTTGGAAA
TATGATTTTATCAAATGAGAGTTAGAGTTAAATAATCACAGCGGAGAAGT
CAATTTGACCGATTAAAAAGTCTAAATAACATGATCTGATTTATATACAG
TATGTTTACTTTTTCTCTATCTTTCCTGAAAGGGCGTGTTTAGTGTAAAG
CGGGCCTTACGGatgtaaacaaatatggtagcGTAACTGTGATGATAAgt
agtttgatttttttatcttatGTTTTGGATATCTAAGCATTTTCTGTTTG
TAATAGGTAAAAtggatttctttttttcatttaatcaTTCATCATTTATT
CAATCATTATTGCTGTAGCAGCATATctctttttcaaataaaactgCTTT
ATCAGCCATTCCTCTATACATAATGCATTCTCGATGTCACTTTTGATTGC
CTTGATcatgaaaaatgcttttttttatgTGTTTATCATTTTTGTTCATA
AATGGTATGAATGGCTGAAGAATCCTAAATATTTGGTGCAATTTAGACTT
ATTTGGTCATCTTTATCACATTACTTTTCATACTATTATTTTTGTGCCTG
TGAGCTGTTGTTTTTATAACCAattcagacaaaaaaaatacaacacATAG
AGAAGCAATAATATCATGCTAATGTACGTTAGCGTATTATGTGATTAAtt
aatagaactagaactagagaAAGCATAGTAAAAGAAAGCCGCGCGGCTGG
AGTGTAGTGTTGACGGTATTGTTTTTGCTGTTCTCTCTGTCATATAACCA
GTTTCTGACAATGGTTCAGTTTTAGTTTTAATAGCAAATTAATGTTATAT
CGCCGTTTTATTAACAACGCTGTAGTCATAAAACAAATGTACTAGACAAT
TCATCTCATTTAAAAATCATACAATGAAGTAAAGCCACTGAATACAGATG
TACTAAGAAGAACAGAATATCATAACAAATAAGAATTGGAACATAAAGTG
CCTCTGATGCCATATTTTAGTTAAGTTATTTCTGGAATAAGTATATAAAG
AAATGTTTCAAGATCACATTCGGGAAATTTCATACAATGAGCTTTGGATT
TACAACTACAATCGTCGTTCAAAGTTGTTGTTTATCAAAAAGTGCTTACT
AAGACAATTTAGGCTACATAGtgttatttttatcaaaataaccaaaaaat
cTATATGATCTAGTTCATAATGCCAAAAAGAACCATACTGGAGATTATCA
AAGTATCAGTTGTcccaaaaaaagaagaaaattacatgaactttataaaa
aaaattagatctACTTGTAGTTCTTATAACGTGCAGCAACACAGATAGAA
CATCAATTAGCTGGCAAAAACAATACCGTCAACATTCCAgtcgcggcttt
cttatactatggagAAAGTGTCTACTTtgcatctattgtttcatttccaa
aacaaagttaaaacacATGCGTAGATTTCTATTTTATAAACTGTTAGTCA
TTATTATCTGCAAAACACAAAAAGGAATGATATGTAGGGGTGCTACTGTA
CACTTTTGGTTGTTGATGGTGaactttttcattatttttggaatttgttg
AAGTTGGCACTTTCTCGCCCTCACAAAGCAGCATTTTTAGTTGAATTTAT
ACAAGACTTTTAGACtaatttttgagaatatttgTTGGATGAAAATCACT
AAGCACAAGGGACATGAGAATGAATTTTAATATGAATTTCTTTTCACCCT
GAAGTTAGTTATTTTGGTGATTctcaattcaatatttttttgaccACATG
Ggtgtttgaaataaaaagtatatattttaaattttgttttcctgtttcaa
ttttaatcttttcgttcaactttttttaaagattttattctAATAGATCT
GTTAAATAAATCATGTCGTTTTTTGAAAGAATCTAAAAACATGAGCTTGT
TTGATTTGCCAGGATTTTTAttcatcttttatttttcaaaagtacaaTTT
GACATACCGTTAGTTTTGTTTGTGGTCAATGTTGCAGAGTGCTCAATGAA
ATATTTAAAGATATCTTTCATAAGGCAGATACAACTCAAGAAATAGAAGG
AAACAATTTGAAAGTGAATAATTTTATACAGATGTAATTCTTGTTATAAC
TGATCAACTGCAagttttggtttcttttgaatattttttgaaattagctc
TTTTCTAGTTTATGCTTCAAATAAGGCAAGTGGGAGGTACTCTCTCTCAA
AAGGATCATATTTCATCTTACATCTGGAGAAttaggttttgttttgaaaa
gttatgTTGTATATTATTTTATAGTGAGTTGTCAGAAGGGAAATTATTAA
ATTTTGGTTCTGTATTCAAGAATATataagtttttattttctattttcag
aaaaaaattaacacaaaacataaaaaaaaatacttgtaAATAAAGATTaa
gattttaaattcaaaatgtccTGGGTTGCATCTGGTATGTCCATGTTACC
TGGTCTATCGCCAAGACCTCAACATCACCTTGTAAACAAAAAGGATTTCA
CAGAGAAAGTTGAATCTACAAGCAATGCAACGTTTGTTAGTGTTCGTGAA
TGTGAAAAAGGTAATATCGAAGTGACTGGCAAAGTTGGGAAAATTTCCTT
AGAGCGTTCTAATGGATTGAAATTATCACTTGATAATCCTGTGGTTGGTG
GAGTGTTAGAAGTGATCAAATGTCAAGATGTTTACATTAGATTACACCAA
GAAGGGGAGGTGAGGAATTATTTTGTTAACATTGTATTAAAAAAGAACCC
AAGGGTggagtactaggtttgcgaggtgacgggtatgtcaaagccaaata
tcaaaaatcgaagttTTTGGGACCATTACATGACTTTTCTTGGAAATCTT
GTCGCCATTCAATCAATTTTGATCCAAATTTTTTATCCTTATACCCTTGA
AATTATTTACTGCGTAAATCTTTTCCCtgagatacacgttttttataaga
acaaactttataagaatataaggcttcgatggccaaaatgttgagAAGAG
AAACACACAACTTCtctggacaaaaatattcaaaaaatggtgaaaatagg
aacacgttaagaacatttttaggcttaaaactcaaaaagttaagaacatc
caaaggcttcaaaaattttggatgctcttataaagaaaaacgtgtaatgg
CGGACTTCCACCTACAAGACGAGTTTACCTTTATGTGGTCTTTGAACTGT
TAGTTACAAAATAgtttagttaaaaaaaaaacacaaaggaGGCTTAACTA
ATAAGGTAATCAATTCAATTACGAGTTACTAGTTACTACTTGAGCCCGTT
TGCACGTGGGAGGGGGGGATGTGgaattgttctttttaaaataCTGTTGT
GTTAGTAAATGATacccttaagagaagaaattttggcgaaaataattaaa
aatgggCATATTCGCCAATTTTGGTGGaatttggcggaatttatttgggt
gatttaataaaatttctaaatttggcgagaattaattttggcgaacgacc
catttttgttcaatattttagttgaaaaaaagggggaaaaaaagggtttt
taggagaaatagagactaaattgaaagaaaattaaatttgacgagAATTT
ATTTCGGCGAATGacctataaatttaaatttctttccgccaaaatttctt
cccttaaccTTTAGcagccgagagacgtaccacgtacgtcatatatactg
gccgagagacgtaccacgtacgttttgatactggggtcctttcaaagttt
aataaaataaagaccagtttgaatttttctattctgtaaaatttagcaga
caggaaggttcattcattcaaaattttacgggTCCTGCTTTTATACATCT
CGAGATATCGGAACTCAATGTCGGTGTATTTTTCGGTAGGTGATAACTAC
TATCCGTATATCTAACACTCCTTCTACTCTTTttcctttcctatctttct
tcTGTATCTTTGCTTCTTCTGACTgtttgagacttagtttctcatttctg
actaagTTTTGATACNTGCTTCTACTGACTgtttgagacttagtttctca
tttctgactaagttttgatacctgtcaatcatttttcgaccaatcaaatc
atcgcACCGGGTCGGATTTGAACCACCACTAAAGAAAGACCTTCTGATTC
GGAAGCCAACACGTTaaccgttgagccacactcgcacagcagaaNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgttact
agcaaccctgaccctacctaactgttaatgACCCACTACCCCCTGAAAAC
GGAATtacggataggaaaaaaaatcgtgttaGATCTACGGATAGTCAATA
TCACTTTCcgtatttttcaaatgtcaacaaaacatcGTTTTAGTGGTGGA
CAGAGGGTGTCTGATGGATTTTTGGACTGAAAAGTCATGTTTATGTCTGg
ttttttcttggtttcagcatataaatatcattatatgagatagagaacct
ttattgGCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTATTGCTTGAATTTACATGATAGAGAGTCTGTTATGATTATTGTAG
TAATTTTACAGGCTTAGGGTAAGTGCAGGGCCAATTTTAGAGCAACGGGA
CCACCTCGGGCCTGTGAGCTTGTATACATCATAATTAATTTACCTGTTGT
GGCCAGAGTGTCGATTTTGGTGGAAAAGTGTGCTTCACCGAAACTTAGAT
TCTGAGATGAAATGAGCTTCTTCAGCCCTGAAATTTCACACAATGGTGGC
TTATAACATAAACTAAAACAAAATAATTTTTCTGGGACCAATCCTTACCT
TGTACCCACTTTTTTCATTCAATTTGTCAAAAAAAAGAAAAAAAGTGAAA
AAATCGTAAACATGGAATTTTTACTGTTTTGATTTGAGGCTGTGGTGTCA
GGTTTAAAAGGGTGATGAGGCGTCTTTTTGGTATTATCTGAAATAATAGA
tccttagcttttcaaaatgggtttactttttacttaagctttagccgttc
agattttatgacattttccgcgaaacctccattttcatgaaaaaaacagc
ggcagcagcgcgcgctgtttttaaaaacagcggtgtctAAAGGTTAAGGT
AGGAGATATgttaaatgatgtttttttaaatgtttttttatcaattttat
cttATTCAGGTGCCAACTTTCCAAGTAGATGACAGCTCAAATGTCACAAT
CGAAATCTGTACACGATCACAAATCGAATGTCTCTATTATATCCGATGCC
AGGGTTTAAAACTTATTCTCAACGATGCAGAATTAAGTGATGATTCATCT
TTCCAATATGAAATACCTACGGAAGAGGCACGTGCTAATTTACAACAGAT
TGCTCATTAGAGTGCTANATCTTTCCAATATGAAATACCTACGGAAGAGG
CACGTGCTAATTTACAACAGATTGCTCATTGGAGTGCTACCAGCGCTGAC
GCCTCGTTCGTGGCGGAGGGCGTTGTACGTGATGGCGTTTATCCAACCAC
GGCGGAAATGAAACGTGCATCAGACGCCAAAAAGCAGCAAATGATCAACG
GGATGGCTTCAATGCTACTTGGTGGAATTGATATTAAGAAGCCAGAACCA
CCTCAAGATGGTAAGTCAAACCAAGGCAGCACTGAAGATGAAAACGAAAA
AGACAAACAATTAAATCTTCCTGATTAAAAAACTTTGCTTTCAGAAATGg
agcgtttttttataaggatcttttcatgtttttttgtcTACGCTTTTCTC
CAAGATTATAGTGCAtgcattttttgtattttttttttatattgattttt
atTAGGTGCTCTTTGTTACACCCGCAAAAAGGGTGTACCTTACAAAGAGT
ACGAATTTTTACGCTttaaacgaaggaagatatgacgtagcggAGAAAAG
AAATATATACCACTAAATCTGGGCCATCATCATTGATTTTCTCTTATCAT
CTCTCAAGTTCATAAATGTAATATGAGAAGAAAACTTAATCTTATtcacc
aaaaattttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029305XLOC_029305Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045854-exon-scaffold_102-1491911889:447715..447745TCONS_00045854-exon-scaffold_102-1491911889:447715..447745Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:447715..447745TCONS_00045854-exon-scaffold_102-1510915933:447715..447745Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:447715..447745TCONS_00045854-exon-scaffold_102-1575043694:447715..447745Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:449531..449705TCONS_00045854-exon-scaffold_102-1491911889:449531..449705Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:449531..449705TCONS_00045854-exon-scaffold_102-1510915933:449531..449705Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:449531..449705TCONS_00045854-exon-scaffold_102-1575043694:449531..449705Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:450605..450748TCONS_00045854-exon-scaffold_102-1491911889:450605..450748Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:450605..450748TCONS_00045854-exon-scaffold_102-1510915933:450605..450748Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:450605..450748TCONS_00045854-exon-scaffold_102-1575043694:450605..450748Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:451097..451252TCONS_00045854-exon-scaffold_102-1491911889:451097..451252Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:451097..451252TCONS_00045854-exon-scaffold_102-1510915933:451097..451252Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:451097..451252TCONS_00045854-exon-scaffold_102-1575043694:451097..451252Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:451873..451963TCONS_00045854-exon-scaffold_102-1491911889:451873..451963Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:451873..451963TCONS_00045854-exon-scaffold_102-1510915933:451873..451963Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:451873..451963TCONS_00045854-exon-scaffold_102-1575043694:451873..451963Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:452761..452900TCONS_00045854-exon-scaffold_102-1491911889:452761..452900Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:452761..452900TCONS_00045854-exon-scaffold_102-1510915933:452761..452900Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:452761..452900TCONS_00045854-exon-scaffold_102-1575043694:452761..452900Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:453261..453391TCONS_00045854-exon-scaffold_102-1491911889:453261..453391Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:453261..453391TCONS_00045854-exon-scaffold_102-1510915933:453261..453391Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:453261..453391TCONS_00045854-exon-scaffold_102-1575043694:453261..453391Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:453902..453970TCONS_00045854-exon-scaffold_102-1491911889:453902..453970Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:453902..453970TCONS_00045854-exon-scaffold_102-1510915933:453902..453970Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:453902..453970TCONS_00045854-exon-scaffold_102-1575043694:453902..453970Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:454828..455820TCONS_00045854-exon-scaffold_102-1491911889:454828..455820Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:454828..455820TCONS_00045854-exon-scaffold_102-1510915933:454828..455820Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:454828..455820TCONS_00045854-exon-scaffold_102-1575043694:454828..455820Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:457915..458273TCONS_00045854-exon-scaffold_102-1491911889:457915..458273Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:457915..458273TCONS_00045854-exon-scaffold_102-1510915933:457915..458273Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:457915..458273TCONS_00045854-exon-scaffold_102-1575043694:457915..458273Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1491911889:461224..462074TCONS_00045854-exon-scaffold_102-1491911889:461224..462074Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1510915933:461224..462074TCONS_00045854-exon-scaffold_102-1510915933:461224..462074Clytia hemisphaericaexon
TCONS_00045854-exon-scaffold_102-1575043694:461224..462074TCONS_00045854-exon-scaffold_102-1575043694:461224..462074Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:447715..462074 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.6007	41.9881	32.5675	33.7188	10.5432	8.76338	14.339	17.5589	8.50643	12.5783	10.7396	8.73809	11.4107	8.1491	13.7279	15.7737	13.3356	15.0637	4.30693	0	7.74019	5.8055	22.8208	20.8714	21.0944	23.1628	9.23195	4.14342	16.819	14.8949
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045854 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top