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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045873 ID=TCONS_00045873|Name=TCONS_00045873|organism=Clytia hemisphaerica|type=transcript|length=1027bp
ttttttttttgcttgataatattccactcacaaatatcttttcaacgagc
acaaaatcgtaaCAGACTTTACCTATTTGCTACCCGTAGTATAAAAAACC
TCTTGTTATTTTCGCCTCTCTTTTCATTTTAGatataaaaaacaatcctt
actTGAGCATACTCAATGGATAAGTTAAAACTGCTCACAATCATTGCATT
ATTCTACTCGCTGGCTTTATTCGATATCCACCAACAACATGGCCGCCATG
TTGTCCAAGCTGTTTCTCTTGACAACATGATCAAAACattacaaaataaa
atcaacgaATTGAAGCGTGAACGGTCCAGTAACAAAGATACTACAAAAGA
GCCTTCGATTGGCGGGAAAAGTGAAACGTCAGACGAAACCGCGCGGCGTG
ATGATAAAGATAAAGAAGATGAGAAAAGAGCTCAGGTGGTGGCGAAATCT
AAACCAGTAACGATTAGAATATGTAGTCAGAATTTGTTTAAGCTGTTCAT
GAAACATATATGTCCGTTACAAATCAAAAAGAAACGACAAGAAATAGAAG
ATGTGACTTTAACAAGAGAACGAGCCAGGAATTTCTTACGATCAGATACT
CGTCACAGTGGGCGATCAAAAAGATCTTCAATCTTCGGTGGAAACGGTGT
CGGTGATATTTTCTTCATGGATGAATGTTGTACCTCAAGAGGTTGTGATC
TACATGAAATCAATGAATATTGTGTCTAAATTTCCTAACCACTTGGATTA
CATTTTTTAGTGGAATTTCAGAAGATCTAATGATAaggataaaatttgat
gaacgATTTGAAGCTTTTGGTTTGATTGGTTTAGAATGAGGTTTTTGTTT
CGGGTAGAGACTAAAGACACGAAACgaagaccattgagtttcaagcccga
agggagactcctggatgggaaatgaaaccacttaatttcccatccagaac
gcccgcgcgtagtttttacacaaacgccggattgaaactaaaatctatcg
ctagatttcaaaaaatgtagtcctcca Run BLAST on NCBI transcript from alignment at scaffold_102:153989..155448- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045873 ID=TCONS_00045873|Name=TCONS_00045873|organism=Clytia hemisphaerica|type=transcript|length=1460bp|location=Sequence derived from alignment at scaffold_102:153989..155448- (Clytia hemisphaerica)
TTTTTTTTTTGCTTGATAATATTCCACTCACAAATATCTTTTCAACGAGC
ACAAAATCGTAACAGACTTTACCTATTTGCTACCCGTAGTATAAAAAACC
TCTTGTTATTTTCGCCTCTCTTTTCATTTTAGATATAAAAAACAATCCTT
ACTTGAGCATACTCAATGGATAAGTTAAAACTGCTCACAATCATTGCATT
ATTCTACTCGCTGGCTTTATTCGATATCCACCAACAACATGGCCGCCATG
TTGTCCAAGCTGTTTCTCTTGACAACATGATCAAAACATTACAAAATAAA
ATCAACGAATTGAAGCGTGAACGGTCCAGTAACAAAGATACTACAAAAGA
GCCTTCGATTGGCGGGAAAAGTGAAACGTCAGACGAAACCGCGCGGCGTG
ATGATAAAGATAAAGAAGATGAGAAAAGAGCTCAGGTGGTGGCGAAATCT
AAACCAGTAACGATTAGAATATGTAGTCAGAATTTGTTTAAGCTGTTCAT
GAAACATATATGTCCGTTACAAATCAAAAAGAAACGACAAGAAATAGAAG
GTAAGAAAATGATTCCCGTTCGCAGGGGTTTTCCATAGATTTATAAAGCC
GGTAGGGCTAGATTTCGTGCTTTGGCTGAAAAGTGTGTCTTTAGACCGGC
GATTGTAATTTCTTCATGCCTTGGACTGGCGAAATTTGTTCGTTTACACT
CATTAGAGAGTTTATATATGCTATTTTTCCCGCAGCCTGAACGGTTACTT
TTGATTTGCCTTTATCCTGACTGCCTGAAGACGATGGTAGATCAGCACTT
TAAACGTTCTTGATTTTGTGGTTTTGAGTTATTTGGCTGACAGTTAGCTC
TCAAACTTGCACGGTGAATCTGATTTGAATTACCACGAATTATAGACAGA
ATCAAATAATAAATAGAGGTTCTAATGAACGAGAGTCTACTATATTCCAT
TTCTCAATGTTCCATTTCTTCATGTCATTTCAGATGTGACTTTAACAAGA
GAACGAGCCAGGAATTTCTTACGATCAGATACTCGTCACAGTGGGCGATC
AAAAAGATCTTCAATCTTCGGTGGAAACGGTGTCGGTGATATTTTCTTCA
TGGATGAATGTTGTACCTCAAGAGGTTGTGATCTACATGAAATCAATGAA
TATTGTGTCTAAATTTCCTAACCACTTGGATTACATTTTTTAGTGGAATT
TCAGAAGATCTAATGATAAGGATAAAATTTGATGAACGATTTGAAGCTTT
TGGTTTGATTGGTTTAGAATGAGGTTTTTGTTTCGGGTAGAGACTAAAGA
CACGAAACGAAGACCATTGAGTTTCAAGCCCGAAGGGAGACTCCTGGATG
GGAAATGAAACCACTTAATTTCCCATCCAGAACGCCCGCGCGTAGTTTTT
ACACAAACGCCGGATTGAAACTAAAATCTATCGCTAGATTTCAAAAAATG
TAGTCCTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045873-exon-scaffold_102-1575043694:154899..155448 | TCONS_00045873-exon-scaffold_102-1575043694:154899..155448 | Clytia hemisphaerica | exon |
| TCONS_00045873-exon-scaffold_102-1575043694:153989..154465 | TCONS_00045873-exon-scaffold_102-1575043694:153989..154465 | Clytia hemisphaerica | exon |
| TCONS_00045873-exon-scaffold_102-1510915933:154899..155448 | TCONS_00045873-exon-scaffold_102-1510915933:154899..155448 | Clytia hemisphaerica | exon |
| TCONS_00045873-exon-scaffold_102-1510915933:153989..154465 | TCONS_00045873-exon-scaffold_102-1510915933:153989..154465 | Clytia hemisphaerica | exon |
| TCONS_00045873-exon-scaffold_102-1491911889:154899..155448 | TCONS_00045873-exon-scaffold_102-1491911889:154899..155448 | Clytia hemisphaerica | exon |
| TCONS_00045873-exon-scaffold_102-1491911889:153989..154465 | TCONS_00045873-exon-scaffold_102-1491911889:153989..154465 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_102 | supercontig | scaffold_102:153989..155448 - |
Blast
The following BLAST results are available for this feature:
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