TCONS_00045882 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045882
Unique NameTCONS_00045882
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2339

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045882 ID=TCONS_00045882|Name=TCONS_00045882|organism=Clytia hemisphaerica|type=transcript|length=2339bp
AAAGAATCAATTTAATTTTGGACAAGAAATGATGAACTTGTATAATAATC
TGTTATTATCTGTCAAACTCTCTGGTTATTTTCTTTGTAAGGTTACGAAT
AtctcaaagtttttggaaaAGTCTGAATTTCATCATCTGCCACCTGACCA
TCAGATTGAGACACTGGCTTTCCTGATGCAATTGGTGATGGACAGTGAGG
AATTCTTAAACTACCACGAAGAAATTGCTAGAGATCGAATGGACGCCATt
cGGGACTTGGAACTTTACCGAAGAAAAAAGAGAGAGGAATATGTGGCAAA
GCATCCTACTCCCTCAACGCAAACACTCCCTATCAACAAGTTCATGGTCA
ACCCCACTATTAAAgaGCCACAAGCCAATAAAATTGTAGTCAATTTGGAC
GGCACAGTAaaagaaaaacctaaaaatGAAGAAGCAAAGAAGGATGATCA
AGAAAAGAAGGATGTAAAAGACGAAGCGAgcaaagatgaaaagaaaactg
ataacgaagaaaagaaagacgaaaagattgaagaaaagaaagacgAAAAG
ATCGAAGAAAAGAAAGACGAAAAGATCGAAGAAAAGAAAGAGGATGACGA
CCTGTATGCTGGCATGACAGAACGTCAAATTCAAGCGATCAAAGACGAAG
CTAAAAAAGCAGAAATGGACAAAATGGAAAAGTTGAAGgaagatttggaa
aaagagcGCTTGGAACTTGACGAACTCAAGAGAAAAATCAAGGTAGCAAC
AGACCTGTGCAACGATGCACAACGTATCGAACCACTTGGTTATGATCGCC
ACGATCGTTCCTATTGGCTTTTCTCCAGAAACAATCCTGGAATCTACGTC
TCCTCTTTAGCATTATGGTATATAATTGACAACGGTGAAACTATCAAAGA
CCTCACGTCAGCGCTGACTGTCCGCGGAATAAGAGAGGACAGACTAAAAA
GAGCCCTTCTTAGATTGCAACCAGAAATCAAAGAATCTATTCAAGTTTTG
AAAGAGAGCGGGACGTCAATTTTAAAAGATGATTTCAAAGACATGCAATC
AAAAGGATGCAGCATTTCAGTTATCAAAAATGACGGCACGCGAACGATAT
ACGGGAAAACTGACGTCGACAGAAGCTCCGATTCGGATGGCGATAAACCG
CTTGTGAAATCAGTAGAGAAAATCGACGAGTCTAAAGAAAACAATAAAGT
TGTTATGAAATCAATCAAAGAGACTGACACCTCAAATGATATTTCTTCCT
CGAAAGATGCCGAAACTGTTAAGGAAAAGATCACAGAGAACGGTAGTATT
AAAGATTCCGAAAAGGAGGAAAGTGAGAACACTAAAAGTGATTCTGTTGA
CAAAGATGGCGAACCAATTAAAATGGAAACGGACTTGAACGAAACTAATG
AAGTTAATGGAGTCATTAATAAAAAGGAAATAAATGATTCCACGAACAAA
TTAGTTAAATCTACAGAGAAGTCTAGTGATGATGCTAGcgacaagaaaaa
tgaaaatgcggACAGCAAATTAAACGGTGACGTTAAAACTAGTAAAGAAC
CTGAAAAGGCTTCTTCCATTGCTACTGCTGCtgaaaataaaagtgaaatt
aaaACGGACACAGataaaaaatctaaatcaaaaGGGTCGGACTTTCCGAC
ATCCATTGAAGCTTTGAAAGCAGATATTTTTGAATCTTCCGAACGGATAG
TGCAAGGGACTCTTGGTCAGCTCAAGCGTTATGATGAATGGACAGCTTCC
TTGACCGCGGTTGAGGAGACCAAGGATTTGAAAACGTTTATCATTGATCT
ACAAAAATCAGTATTCGAGAAGAGCTTTTTATCACCCTTTAAAGGGTTCG
ATCCAGCTTTTGTGAAAGAGTGGTTGAAATCTGTAGAACAAGCAGAAACA
CTATCTAAACTGCATACGCTTTATGGAATCTTGGAGAACAGCATTTCATG
GGAAAAATCCTCCGAAACCTTGAAATGTAACGCGTGCCGTCGTAAACAAG
GTGTTCGAAATTCTACACCGATGGTTATTTGTGATGGATGTCAGAACGCG
TATCATATGAATTGCATACGACCTCCTCTTCTTGAAGTTCCTGAATCTGT
TTGGATATGTCCTCGTTGTGTGCCAAAAGAAGACAGGAGAGGCCGTCGAA
AAGCTGCTCAAAGCTACAACGAACAGCTTGATTCATCACAACAATCTATC
GATGATACGGAGGCATCAGACCACGAAGATGCGTGCCATGTTTGTGGTGC
CGATGGAATGGTCATTCTATGTGATACGTGCCCTCTAAGCTTCCATTTCC
AATGTCACGACCCTCCTCTTAGACGAGCACCCAAGTGAG
Run BLAST on NCBI

transcript from alignment at scaffold_102:247285..256189-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045882 ID=TCONS_00045882|Name=TCONS_00045882|organism=Clytia hemisphaerica|type=transcript|length=8905bp|location=Sequence derived from alignment at scaffold_102:247285..256189- (Clytia hemisphaerica)
AAAGAATCAATTTAATTTTGGACAAGAAATGATGAACTTGTATAATAATC
TGTTATTATCTGTCAAACTCTCTGGTTATTTTCTTTGTAAGGTTACGAAT
ATCTCAAAGTTTTTGGAAAAGTCTGAATTTCATCATCTGCCACCTGACCA
TCAGATTGAGGTGAGTTGATATTATAGCTACAGGGGTTATCGATAAAATT
GTCGATTCAGGGGAAGTCAAAGTCAGTCGATGTGATGAAAGTTGCGTCCG
AGATAAAAAATTCTGTCGGATTTTTAAAATTGATATCTCCTTGTTTACCA
AATCAATCAAATCAATAATGCAACATAGCAAAATCAGTGCTTAGTATTGG
TTACAAGCTTATCAACCATTGCAGACCATTTTGAACTGTTTTGAATTTAA
TCAGTCAAGTTTGAGAAGAGATTGATTCTGCGATGATGCCACTTTACACT
AAGTTATAAATTGGATATAAATGATTTTAATGAATAACATTTGAGAAGAG
AATTTTTCAAAATGCCAAGGAACGAATGTTTAATTTTGTTGTTTCTTTTG
ATTCTAAGACACTGGCTTTCCTGATGCAATTGGTGATGGACAGTGAGGAA
TTCTTAAACTACCACGAAGAAATTGCTAGAGATCGAATGGACGCCATGTA
TGTCAATTTGATTCTCTCGCTATATTACTTGACAATGTTAAAAAAACAAC
AAAGAAATTTTTCCAAAAGCAGGGATCGAATTAGCGTATCACATTTCGCA
ATTCGCGATGTGTTTTTTGATTACTTACAAGCTAAAAATTGAAAATTGAT
CCATGTTAGGATGCAAAATCATGCTTATCAAAAAATTGCGATGCACTTTC
TATCCCTTATTTCGATGCCTGAAAAGTTGCAGAGGAAGAAGAGTAGAGTG
TAAATTCATACAAAAGATCTGACCATTCTTGGCATCCCTTGAACTATGAA
ATTATCTCTTCTTTTTTTAACTGAGCCTTGTTTTTATGTCACAATGTGGA
TTATGTTGGATTACATTTATATGAAAACTAAAGTTAATACGATATTCCCA
CTACGAATGTCTGAAACGAAGAGGGTCTGAATCCAACTATAATATGTAAG
ATAATTTTATCTTTTTAGTCGGGACTTGGAACTTTACCGAAGAAAAAAGA
GAGAGGAATATGTGGCAAAGCATCCTACTCCCTCAACGCAAACACTCCCT
ATCAACAAGTTCATGGTCAACCCCACTATTAAAGTATGTATATATGTGAA
AAATAAATGAAAACAGGCTCTCTTATGGTTATTTTCAAGCAACAAAAATT
CTGAAAGTTTATTGTCTTCTTGAGAACTAATTTTCTCAAAAAGGGTTGTT
TTGGAAAGTAAGAAATGTGGTTTTCGCAAAAACGTATTAAAAAGATATCG
TTTTCTATGGTATACAGACTAGTATTCTAGGTCGTCAAACAATTCATATG
AAATGATATTTTGTAAGTAATCAAATTATGAATAAGAAATAATACATTTT
ATTTTATTTTTAAAATATTTTAGGAGCCACAAGCCAATAAAATTGTAGTC
AATTTGGACGGCACAGTAAAAGAAAAACCTAAAAATGAAGAAGCAAAGAA
GGATGATCAAGAAAAGAAGGATGTAAAAGACGAAGCGAGCAAAGATGAAA
AGAAAACTGATAACGAAGAAAAGAAAGACGAAAAGATTGAAGAAAAGAAA
GACGAAAAGATCGAAGAAAAGAAAGACGAAAAGATCGAAGAAAAGAAAGA
GGATGACGACCTGTATGCTGGCATGACAGAACGTCAAATTCAAGCGATCA
AAGACGAAGCTAAAAAAGCAGAAATGGACAAAATGGAAAAGTTGAAGTAT
GGTTTTTCAACGAGTTTTCCTAGCATTCTGAACGTTCTAAATTCAACTCA
AAATCCTGGAGGGACAAACTGGACTTTTTAAAAGCTCTTCTTTGATTTGG
TTGGTTGTTAACCTGTAATAAAACAATTTTGTTGCTTATTCATAAGAAAT
CTCTTTTACCTCCAATGACCAATATTAGTCAAATATCTTATAAAAACTCC
AGCTCATCCCTTCCCAGAGAACTTCATATTGTAGCCTAGAACTTTGCACT
TTTTAGAATGTTGAGTACTCAAAAAAACTTCAAATATGTAAACGCAATAA
AACCACAGAATATAAACATTTTACTGCTTTCCTAAATCTCTATAATACGA
CTGAAACTTATCTGATTGGAACTGAAAAGTCTCGTTGCTCTTATTTAATT
TAAGTTAGAAAAAGCAATAGATAGGACAAGAATTCGAGCAACTGGTTATT
GGAACTTTTGGCAACTGGTTATTGGAACTTTTGCCTCATCAGCATCACTA
AAGACTAAAATAACGAAAATTTCCAAATAATCAATCGTAAACTGTAGTCC
CTAACAATCTTAATGACTACTCTTTTTTAGGGAAGATTTGGAAAAAGAGC
GCTTGGAACTTGACGAACTCAAGAGAAAAATCAAGGTAAGACATTCCTTT
ACATTGCGAACCAGAAAGCCTGGGATAGGAGGATACTTACAAAAATTCTA
GGAGCTTTGAAATAGTTTTTTCTGTGATACTGATATACAGAGATTTAATC
ATCCATTTTCATACATTTTTTTGAAATTTGGTCTATTCTACTCCATTTAG
TTAACCCTTGTTATAACACTACATTTCTACCCTTCATAAAATATCATAAG
AACATTTGAAATAAAATATTGGTGAAAACGCCGTTTTGGTAAGACTCAAG
GTAAGTACTGATGCCAGTCAAAAATTGTGTGAGGTTTTAAAAATTTCAAA
AATTGGTAAAAAAACTAATTTTGGTCATAACTTTTAAAGAATTTATTTTT
TTCAAGTGGTATTTTTACTGCAATTTATCAATAGACAGCCCATCAAGTTA
AAACACTAAGTGTCAGTCGCCAGGTTTGAAGCCACCAAAATGACTCACAG
TTTAGACTCTGTTTTCTGATGATATTGTCAGCCACTTTTTATGTNGATGA
CGACCTGTATGCTGGCATGACAGAACGTCAAATTCAAGCGATCAAAGACG
AAGCTAAAAAAGCAGAAATGGACAAAATGGAAAAGTTGAAGTATGGTTTT
TCAACGAGTTTTCCTAGCATTCTGAACGTTCTAAATTCAACTCAAAATCC
TGGAGGGACAAACTGGACTTTTTAAAAGCTCTTCTTTGATTTGGTTGGTT
GTTAACCTGTAATAAAACAATTTTGTTGCTTATTCATAAGAAAGCGTCAT
CTCTTTTACCTCGAATGACCAATATTAGTCAAATATCTTATAAAAACTCC
AGCTCATCCCTTCCCAGAGAACTTCATCTTGTAGCCTAGAACTTTGCACT
TTTTAGAATGTTGAGTACTCAAAAAAACTTCAAATATGTAAACGCAATAA
AATCACAGAATGTAAACATTTTGCTGCTTTCCTAAATCTCTATAATACGA
CTGAAACTTAACTGATTGGAACTGAAAAGTCTCGTTGCTCTCATTTGATT
TAAGATGCAAACAGCAATAGATAGGACAAGAATTTGAGCGACAGTTTATT
GGAACTTTCCTCTCATCAGCATCAATGAAGACTAAAATAACGAAAATTTC
CAAATAATCAATCGTAAACTGTAGTCCCTAACAATCTTAATGACTACTCT
TTTTTAGGGAAGATTTGGAAAAAGAGCGCTTGGAACTTGACGAACTCAAG
AGAAAAATCAAGGTAAGACATTCCTTTACATTGCGAACCAGAAAGCCTGG
GATAGGAGGATACTTACAAAAATTCTAGGAGCTTTGAAATAGTTTTTTCT
GTGATACTGATATACAGAGATTTAATCATCCATTTTCATACATTTTTTTG
AAATTTGGTCTATTCTACTCCATTTAGTTAACCCTTGTTATAACACTACA
TTTCTACCCTTCATAAAATATCATAAGAACATTTGAAATAAAATATTGGT
GAAAACGCCGTTTTGGTAAGACTCAAGGTAAGTACTGATGCCAGTCAAAA
ATTGTGTGAGGTTTTAAAAATTTCAAAAATTGGTAAAAAAACTAATTTTG
GTCATAACTTTTAAAGAATTTATTTTTTTCAAGTGGTATTTTTACTGCAA
TTTATCAATAGACAGCCCATCAAGTTAAAACACTAAGTGTCAGTCGCCAG
GTTTGAAGCCACCAAAATGACTCACAGTTTAGACTCTGTTTTCTGATGAT
ATTGTCAGCCACTTTTTATGTAAGTTATATCACCATAAAGCCAGATAATT
TATCTTAACCATGAATTTAGTTTAAAATGTCAGCCACCATTCGGTCTCAT
TTTATGAGCAAAAAGGTGGCTGATTTTTCAAACCTCACATTTAGGGGGGG
TATTTTTGACTGGCATCTACTTCCCGTACTAAGATTCCACTGCCAATTTT
GTAGTAGTTGAAAAATGAGCTTCAGAAAGTTAGGCGGTTTCCCTAGTCAA
CACAGGATTTTCCCTACCTTTAGAAAATAACTTTTTAAATCACATGTTGA
TTTTCCCGGGGAAAATAGCGGTAATTTTTTCCGTAAAATCTCACTCCCTA
AACGGCAGTGACCTCTGTTTCCCATCAATAGATGTCCCTAGAGAAATATA
ATCCACATCTTCTGATTTCTTATGTCTATCGATTGTTACTTTATAGGTAG
CAACAGACCTGTGCAACGATGCACAACGTATCGAACCACTTGGTTATGAT
CGCCACGATCGTTCCTATTGGCTTTTCTCCAGAAACAATCCTGGAATCTA
CGTCTCCTCTTTAGCATTGTATGTATTCATTTTTACCCTTAAATCATGGA
ACAGTGGCCAGAGTTTTGAGGGGTGACGCAAATTCGTCGAAAACTGTCTA
CTGGAAGAGTGACCTTATCTTTCCTTACAGGTCCCCGGAAAAGACATAAC
CCATAAATAGTTAAAAACTTTCATATCCTCGAGTAACAAGCATCTAGGTG
CACCTCGTGTTTGGTGCACTTACCTTTTTTTCTTTGTTCTTGGAATTATA
AAATTCAATTGAGATTTTAATGCGCCTCGATCTTGTTCTGCGTCTTTTTT
ATTTCAAATTTTTTGAAATCATTTTGTTCAACATTTCCTTCTGTAGATGG
TATATAATTGACAACGGTGAAACTATCAAAGACCTCACGTCAGCGCTGAC
TGTCCGCGGAATAAGAGAGGACAGACTAAAAAGAGCCCTTCTTAGATTGC
AACCAGAAATCAAAGAATCTATTCAAGTTTTGAAAGAGTAAGTTTTGTTA
ATTTCACAATTATTTGTCATCCTTGCTCTTACTCTTTGTGGCAATTGAAG
TAGAAAGAGGATCCCGCCGACGCGGGTGACATGGGCCTTTTTATGGAGTA
GTTGCATATCCTAGGATAGGGTTATCATTGCGCTTACCAGACACCGTTGA
CACTGTTTTGGAGACTCAACAAAGCCATTGTGTATTACTGACATTATTCG
AAAAAGCATTGGAAGATTGCTCTCGGAAGGATATACAACGCTTGCTAACT
TTCCAAATTTCTAAACTTCACTACTTCTTACAACCTTTCTTGGTATGTCC
AAATCATTGTTTAACTTGCCAAGTCTTTTTTTCTTAGGAGCGGGACGTCA
ATTTTAAAAGATGATTTCAAAGACATGCAATCAAAAGGATGCAGCATTTC
AGTTATCAAAAATGACGGCACGCGAACGATATACGGGAAAACTGACGTCG
ACAGAAGCTCCGATTCGGATGGCGATAAACCGCTTGTGAAATCAGTAGAG
AAAATCGACGAGTCTAAAGAAAACAATAAAGTTGTTATGAAATCAATCAA
AGAGACTGACACCTCAAATGATATTTCTTCCTCGAAAGATGCCGAAACTG
TTAAGGAAAAGATCACAGAGAACGGTAGTATTAAAGATTCCGAAAAGGAG
GAAAGTGAGAACACTAAAAGTGATTCTGTTGACAAAGATGGCGAACCAAT
TAAAATGGAAACGGACTTGAACGAAACTAATGAAGTTAATGGAGTCATTA
ATAAAAAGGAAATAAATGATTCCACGAACAAATTAGTTAAATCTACAGAG
AAGTCTAGTGATGATGCTAGCGACAAGAAAAATGAAAATGCGGACAGCAA
ATTAAACGGTGACGTTAAAACTAGTAAAGAACCTGAAAAGGCTTCTTCCA
TTGCTACTGCTGCTGAAAATAAAAGTGAAATTAAAACGGACACAGATAAA
AAATCTAAATCAAAAGGGTCGGACTTTCCGACATCCATTGAAGCTTTGAA
AGCAGATATTTTTGAATCTTCCGAACGGATAGTGCAAGGGACTCTTGGTC
AGCTCAAGCGTTATGATGAATGGACAGCTTCCTTGACCGCGGTTGAGGAG
ACCAAGGATTTGGTAAGTCGCATGTGGCCCAGTGTCCTGACGACATTAGT
TTAAACAATTTGTTATTGTTTCCATGTTCTAAGATATACGTTAAGATATT
CGAGCTGTCAGACTGGTGTGAGATTCTCACTCAATTTCTTCTTGCTTTTC
GTGAAATCGAAAATTTGAGGCAAGTCTAAAGAGCTGAACAAATTCAGCAT
TCCTTGTATTCCCTTTTTTAGACTATGCTCTAGACTAAGATCTCCTTAAA
GTTTCTTAGATCTAGATCTAATTGGATACTATACTATTCACTNTCTAGAC
TAAGATCTCCTTAAAGTTTCTTAGATCTAGATCTAATTGGATACTGTACT
ATTCACTTTTAGAAAACGTTTATCATTGATCTACAAAAATCAGTATTCGA
GAAGAGCTTTTTATCACCCTTTAAAGGGTTCGATCCAGCTTTTGTGAAAG
AGTGGTTGAAATCTGTAGAACAAGCAGAAACACTATCTAAACTGCATACG
CTTTATGGAATCTTGGAGAACAGCATTTCATGGGAAAAATCCTCCGAAAC
CTTGGTGAGCTTCTTGAGTCAGATTTTGTGAATTTCATTAATCGAAAGTC
CACCTTTTATGGAGCAAAAAAAAAAGTAAAGCAGACGTCGAGCGTTTAGA
TACCATATTCTATTCGCGTGAAATTCACGTGGAGTATGAAGGACCAAAAA
AGTTATGTAATGTCAATAGCTAAAGTAAAAACATGGATTGAATACACCTT
TTCGACCGTAGCCGCCAATTACCGCGCGGGCATTTTTTTGTCCGCTTTAT
CCCACTAAAACTGTCCCAGTCCTTTTTTGACACATTTTTCTATTGTCTAT
AGTCGCGAAAAAAGGACTGGGACGGTTTTAGTGGGATAAAGCGAGGAGAA
AATGCCCGCGCGGCAACTGGCGGCTACGGTCGAAAAGGTGTATTCCTTCC
AAATTACAAGTTAAAGTGATATTTTACGCTCACAGAAACCACTGATTAGT
AAGAATATTCTTTTCTCTTTGTTTTATAGAAATGTAACGCGTGCCGTCGT
AAACAAGGTGTTCGAAATTCTACACCGATGGTTATTTGTGATGGATGTCA
GAACGCGTATCATATGAATTGCATACGACCTCCTCTTCTTGAAGTTCCTG
AATCTGTTTGGATATGTCCTCGTTGTGTGGTAAGACGATTCCCGGTTTAC
TGACACTATTTGAAACATTGGAGTCTCTCTCTTCTGTAGCTCGAATGTGT
CCTTAACTCGAACAAATTTTCTTGTCCCTTCAGTGATCCTCCATATCCTG
AAATTTCCTTAACTGGAAAAAAATCTGCGTTCCTCGTGCGTGTTCGAGAC
ACAACCGTGTACATTAAATTTTGACCGAAATTCATATTCGCAACTAGAAC
TTATGCNTGCAAAATCAGTCCGAAAAGCAACCAAAAAATAGGTGGTCTCC
ATGACAAATTGTCCCAAAAGCTTTTACTACCAGGGTAGTAAAATACCTTT
TCCAAGAGTCTGGGTGGTGGTATGTAAAAATTCGTAAAAATCCTTTTACT
ACCGACCCCCCCTGATAGAATAACTTCATTTCGGTTTCCGAACGGAATGG
CATTGTTTTGTGTAAACATGTCTAATACTTACTCTTGCTTTTGATTCCCA
CAGCCAAAAGAAGACAGGAGAGGCCGTCGAAAAGCTGCTCAAAGCTACAA
CGAACAGGTATAATACTCTATACACTTTTCCCGAATTGTTTGGTATTTTT
CGAAGGTCTTCAAACCATATTGAAAACTATATATTTGTATTCCTCCTATA
AAGACAAGTGCATGCTGAAAATTTGAGCTCAAAAGCTTTTTTCTACCATT
TTTTATGACTGTTTTTGTTCACGGTGAAATCACTTATAAAAATTAAAACA
TACAGCCCGGCCTCGTTTCCATGTATTTCTATTGTTTATAAAGAAATTCA
AATCAAAATAACTCAAGAACCGGAAGTGCTTTTTTCGTTTCTTTTTTTAT
TTGTTTAGTTTTGCGACATTCAATTTTATGAAACTAAATAGAAACATCCA
AACATTAAAAGTAAAAAGTCAAAAAGCCTAAATAACAATTCGGGAAAGGT
GTATTGCAACTCAAACCGGCAACTCAAACTCAACTTAATGATAATCAGGA
TTTTTTATTGACTTTGGAAATCAAAGAATCTATTCAAGTTGACTTTGACT
TTGGTTCTAGGCTGTTTTACATAGTTTGATAACTTTCACACAGATAAAGA
AAGCGCTACTCCAGGCTTTGCTAGATAAATCAAAGAATTTTGGAAGCCCA
AATTCTACAAGCACAATTTCTAAAATGAAATTAGGACTATGATTTTCTGA
AAATACCGTTTTGATTTAAGTTTTTATTCTCTGATCTTTCAGCTTGATTC
ATCACAACAATCTATCGATGATACGGAGGCATCAGACCACGAAGATGCGT
GCCATGTTTGTGGTGCCGATGGAATGGTCATTCTATGTGATACGTGCCCT
CTAAGCTTCCATTTCCAATGTCACGACCCTCCTCTTAGACGAGCACCCAA
GTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029319XLOC_029319Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045882-exon-scaffold_102-1575043694:256030..256189TCONS_00045882-exon-scaffold_102-1575043694:256030..256189Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:255543..255631TCONS_00045882-exon-scaffold_102-1575043694:255543..255631Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:254957..255071TCONS_00045882-exon-scaffold_102-1575043694:254957..255071Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:254344..254666TCONS_00045882-exon-scaffold_102-1575043694:254344..254666Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:252478..252532TCONS_00045882-exon-scaffold_102-1575043694:252478..252532Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:251422..251543TCONS_00045882-exon-scaffold_102-1575043694:251422..251543Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:250953..251093TCONS_00045882-exon-scaffold_102-1575043694:250953..251093Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:249828..250602TCONS_00045882-exon-scaffold_102-1575043694:249828..250602Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:249286..249477TCONS_00045882-exon-scaffold_102-1575043694:249286..249477Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:248661..248810TCONS_00045882-exon-scaffold_102-1575043694:248661..248810Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:248133..248186TCONS_00045882-exon-scaffold_102-1575043694:248133..248186Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1575043694:247285..247447TCONS_00045882-exon-scaffold_102-1575043694:247285..247447Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:256030..256189TCONS_00045882-exon-scaffold_102-1510915933:256030..256189Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:255543..255631TCONS_00045882-exon-scaffold_102-1510915933:255543..255631Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:254957..255071TCONS_00045882-exon-scaffold_102-1510915933:254957..255071Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:254344..254666TCONS_00045882-exon-scaffold_102-1510915933:254344..254666Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:252478..252532TCONS_00045882-exon-scaffold_102-1510915933:252478..252532Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:251422..251543TCONS_00045882-exon-scaffold_102-1510915933:251422..251543Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:250953..251093TCONS_00045882-exon-scaffold_102-1510915933:250953..251093Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:249828..250602TCONS_00045882-exon-scaffold_102-1510915933:249828..250602Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:249286..249477TCONS_00045882-exon-scaffold_102-1510915933:249286..249477Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:248661..248810TCONS_00045882-exon-scaffold_102-1510915933:248661..248810Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:248133..248186TCONS_00045882-exon-scaffold_102-1510915933:248133..248186Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1510915933:247285..247447TCONS_00045882-exon-scaffold_102-1510915933:247285..247447Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:256030..256189TCONS_00045882-exon-scaffold_102-1491911889:256030..256189Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:255543..255631TCONS_00045882-exon-scaffold_102-1491911889:255543..255631Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:254957..255071TCONS_00045882-exon-scaffold_102-1491911889:254957..255071Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:254344..254666TCONS_00045882-exon-scaffold_102-1491911889:254344..254666Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:252478..252532TCONS_00045882-exon-scaffold_102-1491911889:252478..252532Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:251422..251543TCONS_00045882-exon-scaffold_102-1491911889:251422..251543Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:250953..251093TCONS_00045882-exon-scaffold_102-1491911889:250953..251093Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:249828..250602TCONS_00045882-exon-scaffold_102-1491911889:249828..250602Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:249286..249477TCONS_00045882-exon-scaffold_102-1491911889:249286..249477Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:248661..248810TCONS_00045882-exon-scaffold_102-1491911889:248661..248810Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:248133..248186TCONS_00045882-exon-scaffold_102-1491911889:248133..248186Clytia hemisphaericaexon
TCONS_00045882-exon-scaffold_102-1491911889:247285..247447TCONS_00045882-exon-scaffold_102-1491911889:247285..247447Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:247285..256189 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.82645	8.48757	7.27439	7.62041	47.9673	35.9502	15.461	16.8601	5.78773	7.59333	8.03284	6.71182	7.61122	7.88973	5.93418	7.65295	8.18434	8.57407	3.93784	5.72873	9.4636	9.5871	17.0931	15.7599	22.1941	22.3575	5.16204	5.11241	15.3458	19.9576
Blast
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BLAST of TCONS_00045882 vs. Swiss-Prot (Human)
Match: BAZ1B (Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.910e-25
Identity = 59/193 (30.57%), Postives = 98/193 (50.78%), Query Frame = 2 
Query: 1655 IEALKADIFESSERIVQGTLGQLKRYDEWTASLTAVEETKDLKTFIIDLQKSV---FEKSFLSP------FKGFDPAFVKE-------------------WLKSVEQAETLSKLHTLYGILENSISWEKSSETLKCNACRRKQGVRNSTPMVICDGCQNAYHMNCIRPPLLEVPESVWICPRCVPKEDRRGRR 2149
            +  L++D+ E + R+ +G LG ++   E+ A + ++E+ KD    +I LQ SV   F + F++P       +  D A  +E                   W  ++ +A+T S++H L G+L+  I W+ S+E  +C  CR+K        +++CD C  A+H+ C+RP L EVP+  W CP C P   RR  R
Sbjct: 1052 LNFLRSDLIEVATRLQKGGLGYVEETSEFEARVISLEKLKDFGECVIALQASVIKKFLQGFMAPKQKRRKLQSEDSAKTEEVDEEKKMVEEAKVASALEKWKTAIREAQTFSRMHVLLGMLDACIKWDMSAENARCKVCRKKG---EDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPATARRNSR 1241
The following BLAST results are available for this feature:
BLAST of TCONS_00045882 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BAZ1B3.910e-2530.57Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=B... [more]
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