TCONS_00045896 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045896
Unique NameTCONS_00045896
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2220

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045896 ID=TCONS_00045896|Name=TCONS_00045896|organism=Clytia hemisphaerica|type=transcript|length=2220bp
TTTACATTGTCGATGGTTCTGTCTTTAGTTTGCGGTAGTAGGTTGTATTC
TTTTCCCacattttaatgtattttttagacgtaaataaataaaaagcgAT
CGCAATGCTGCAAGCCGTTCGTAAGCAAATCTTGCCAACTTCCAACCGAG
TCCTAGCTGCTTGTTTCAACACTTCAGCAGCACAACATTCAGAAGTTCAA
TATGGTGTTCCTACTAAAATGATGGCAACAGAGGCTCTGGTTGAAGCTAT
GGTTGCACAAGGTGTTACCGATATTTTCGGAATTGTTGGCTCTGCTTTTA
TGGATCCGTTAGATATCTTCCCGGAAGCAGGAATCCGGTTTTTGCCAGTT
CAACATGAACAGAATGCAGGGCACATGGCTGATGGTTATTCTAGAGCAAC
CGGAAAACACGGAGTCTGCATTGCACAAAATGGCCCAGGCATCACCAATT
ACGTCACATCTGTCGCTGCTGCATACTGGGCCCATTCCCCTGTCGTTTGC
GTCACACCTGAAGCTGGTACAATGACCAAAGGCCTTGGTGGTTTCCAAGA
ATCTGACCAAATGGAGATCTTCAACAGCATTACAAAGTTTCAAGGACATG
TTAATAACCCTGGACGTATGGCTGAAATCACATCACGATGCTTTGATATT
GCAATGAACGAACGTGGCCCGACTCAATTGAATATCCCACGTGACTATTT
CTACCACGAAGACGATTACATCATCAACAAACCACTCCGAGTAGAAAAAT
CTGCTGGCGGACCCACATCTTTGGAAAGTGCCGCTGAACTACTTCGTGGT
GCCAAGAACCCAGTCATCTTAGCTGGTGGTGGCGTTGTCATTGGTGGAGC
CACAAATAGTGTGAAAGCTCTTGCGGAATATTTACAAGCACCCGTTTGTA
CAACATATTTACACAATGATGCTTTCCCAGCATCTCACCCACTGTGGTGT
GGCCCTCTCGGTTACCTTGGACACCAAACTGCCATGCGAACAATCCACGA
AGCTGATGTTGTCGTTGCTATAGGAACAAGATTGGGACCTTTCGCCACCC
TACCACAATATGGTTTTGACTACTGGCCTAAAAACGCCAAAGTCATTCAA
ATCGAAGCCGACCCAAGACGTATCGGATTGGTGAAACCAATTGCTGTCGG
TGTAAATGGGGACGCAGGGCTTGCTACCGATGATATCCTTGCAAGGCTCC
AATTACACGGTGATGCACAAGCTTTGGCTAACAAAAATGAACGTATCACA
AAATTGAATGAAGTCCGTGAAACTTGGGAAAATTTATTGAATGATATGAC
TCATGACCAAACCAATGCACGAGAAGGTAAGATCAACCCACGTGAGGCTT
TACGCGAGTTAGAACTAGCCACGCCCAAAGATGCTATGGTTTCTACTGAT
ATCGGTAATGTTTGCTCAGTTGCCAATGGATATCTTCGCTTCGAAGAATC
TCCAAGCTTCTTTGCCGCTATGTCTTTTGGTAATTGTCAATACGCCTTCC
CTACGATGATGGGCGCTAAAGTTGGACGCCCAGACCGCCCAGCTATTGCA
TACGTTGGTGATGGTGCTTGGGGAATGAGTTTCAATGAATTGTTGACTTG
TGTGCGAGAACAAATTCCAATGATCGCCGTCGTTTTCAATAATGGACAAT
GGGGGGCTGAGAAGAAAAACCAGgtcTTGTGGTTCGGTGATCGATACATT
GGTGTCAATTTAGACAATCCATGGTCATATGCTGAAATTGCACGAAGCAT
GAAATGTGAAGGTATCACTTGCACACACAAAGATCAAGTTGGTAGTGCAT
TAACCCAGGCTCTTCAACATCAACGTGACGGAAAAACTACAGTTATTGAA
CTTATGTTCAGTCGCGAACTTGGAGATCCTTTCAGACGTGATGCTATGAA
ATTACCCAAAAGATATTTGTCTAAATATCAAAGCACTATTCAGTCACAAG
AATCGTCCACTGGCCAACCTACCGATAATTAGGATTATGGGTAATTTGTT
GGgatgaaaattaaaagattttattgagaattatatttttaatagaaatt
ttaaaaatcttttttgtataaatttattattaaattcttttggttttttt
atATTAGGGGcctttttctactttttttaatgtacaataacaacattatt
tttttcttgaaggTAAATATTAGAATAACACTGAAAAAGTGAATTTAAAA
ACTAATTTGATACTGTCTAT
Run BLAST on NCBI

protein sequence of TCONS_00045896-protein

>TCONS_00045896-protein ID=TCONS_00045896-protein|Name=TCONS_00045896-protein|organism=Clytia hemisphaerica|type=polypeptide|length=625bp
MLQAVRKQILPTSNRVLAACFNTSAAQHSEVQYGVPTKMMATEALVEAMV
AQGVTDIFGIVGSAFMDPLDIFPEAGIRFLPVQHEQNAGHMADGYSRATG
KHGVCIAQNGPGITNYVTSVAAAYWAHSPVVCVTPEAGTMTKGLGGFQES
DQMEIFNSITKFQGHVNNPGRMAEITSRCFDIAMNERGPTQLNIPRDYFY
HEDDYIINKPLRVEKSAGGPTSLESAAELLRGAKNPVILAGGGVVIGGAT
NSVKALAEYLQAPVCTTYLHNDAFPASHPLWCGPLGYLGHQTAMRTIHEA
DVVVAIGTRLGPFATLPQYGFDYWPKNAKVIQIEADPRRIGLVKPIAVGV
NGDAGLATDDILARLQLHGDAQALANKNERITKLNEVRETWENLLNDMTH
DQTNAREGKINPREALRELELATPKDAMVSTDIGNVCSVANGYLRFEESP
SFFAAMSFGNCQYAFPTMMGAKVGRPDRPAIAYVGDGAWGMSFNELLTCV
REQIPMIAVVFNNGQWGAEKKNQVLWFGDRYIGVNLDNPWSYAEIARSMK
CEGITCTHKDQVGSALTQALQHQRDGKTTVIELMFSRELGDPFRRDAMKL
PKRYLSKYQSTIQSQESSTGQPTDN
Run BLAST on NCBI

transcript from alignment at scaffold_102:334684..341461-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045896 ID=TCONS_00045896|Name=TCONS_00045896|organism=Clytia hemisphaerica|type=transcript|length=6778bp|location=Sequence derived from alignment at scaffold_102:334684..341461- (Clytia hemisphaerica)
TTTACATTGTCGATGGTTCTGTCTTTAGTTTGCGGTAGTAGGTTGTATTC
TTTTCCCACATTTTAATGTATTTTTTAGACGTAAATAAATAAAAAGCGAT
CGCAATGCTGCAAGCCGTTCGTAAGCAAATCTTGCCAACTTCCAACCGAG
TCCTAGCTGCTTGTTTCAACACTTCAGCAGCACAACATTCAGAAGTTCAA
TATGGTGTTCCTACTAAAATGATGGCAACAGAGGCTCTGGTTGAAGCTAT
GGTTGCACAAGGTGTTACCGATATTTTCGGAATTGTTGGCTCTGCTTTTA
TGGATCCGTTAGATATCTTCCCGGAAGCAGGAATCCGGTTTTTGCCAGTT
CAACATGAACAGAATGCAGGGCACATGGCTGATGGTTATTCTAGAGCAAC
CGGAAAACACGGAGTCTGCATTGCACAAAATGGCCCAGGTATCTAGCAAT
TTTTTTGTCATCGTTTCTTTCCTTTGGTTTTCTTTATCTAAACTAATGTC
AATAGATCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTGTG
GGATTGTTTCGGGGGTATTACAATAGAAATCTCTTAGGAATTCCTCGAAG
GAATTCTATTGTAATACCCCCGAAACAATCCCACATCACAGTTTAGGAAA
AATCAAAAACTCCGATAAGGTCTAATGAATAACACAATATTCTAGTGACT
AAGACTTCTCTGCACATCCTTTGAATATTAATATGCAAGAAAATAGCGCT
GCGTTGCCTCCCTGGTCTGCGTGTAAGCCAAAAGCGTTGTGTGGAATAAA
TATCGTATCATCGTTAATTTCTTTAGTCGAGTTTATAGCACCATAAAAGG
TAAAACTCAAAGCAAGATGATTTGTTGACCAGTGAAAATTTGTAAAAATG
TGTTAACTTTCTGTTTTTTTATGGACACGCTACATACTCTAAACCTTTCA
CTTTATTCTTCTTTTCAAAGGCATCACCAATTACGTCACATCTGTCGCTG
CTGCATACTGGGCCCATTCCCCTGTCGTTTGCGTCACACCTGAAGCTGGT
ACAATGACCAAAGGCCTTGGTGGTTTCCAAGAATCTGACCAAATGGAGAT
CTTCAACAGCATTACAAAGTTTCAAGGACATGTTAATAACCCTGGACGTA
TGGCTGAAATCACATCACGATGCTTTGATATTGCAATGAACGAACGTGGC
CCGACTCAATTGAATATCCCACGTGACTATTTCTACCACGAAGGTATTTT
AAGATAATTTAAAACCAATGCTTTACTCTTTGATCATGTATTTATCTTAG
CTAATTTAACTGAATGTTGTCAAGAACTCATAACGATAAGAAATTACAAA
TAGTATTGTAACTATCACGCAAAATTAACGTCCTTGGACTGCTTTCGTAA
CCTTACTTTTTTCTGTCTTATTTCCTACAAAGAAGAAGCATTGTAGAGAA
CGTTCTTACGAGATTTCAGCTATTAACTTTAAACACAAGTAGAGTTTTTC
AAAGTGCTTTATTTTAAGTACACTGCACGCCTATTCGGTTTTGTTGATTT
TTTTCCTACAATTTCCTCGTTTCAGACGATTACATCATCAACAAACCACT
CCGAGTAGAAAAATCTGCTGGCGGACCCACATCTTTGGAAAGTGCCGCTG
AACTACTTCGTGGTGCCAAGAACCCAGTCATCTTAGCTGGTGGTGGCGTT
GTCATTGGTGGAGCCACAAATAGTGTGAAAGCTCTTGCGGAATATTTACA
AGCACCCGTTTGTACAACATATTTACACAATGATGCTTTCCCAGCATCTC
ACCCACTGTGGTGTGGCCCTCTCGGTTACCTTGGACACCAAACTGCCATG
CGAACAATCCACGAAGCTGATGTTGTCGTTGCTATAGGAACAAGGTATAC
GATAATCTCAATAAAATGATCACTTTTTATTTATCGGGAGGTAATTTACT
GCTTATTCATAACCCAATTTTACAAGATTAAAGTTATCTTCAAACTTGCA
TGACAAAGCATAATTGAAAATTCCAAACATGTAATAACTCACATTTAGAA
TATTGATTGCTCATGAAATACAAAGACCTATTCTGATAATTTCCTTTTCT
TGCACAGATTGGGACCTTTCGCCACCCTACCACAATATGGTTTTGACTAC
TGGCCTAAAAACGCCAAAGTCATTCAAATCGAAGCCGACCCAAGACGTAT
CGGATTGGTGAAACCAATTGCTGTCGGTGTAAATGGGGACGCAGGGCTTG
CTACCGATGATATCCTTGCAAGGCTCCAATTACACGGTGATGCACAAGCT
TTGGCTAACAAAAATGAACGTATCACAAAATTGAATGAAGTCCGTGAAAC
TTGGGAAAATTTATTGAATGATATGACTCATGACCAAACCAATGCACGAG
AAGGTACTTTTTTGAAACTATGATTCTGCTTGATTGATTTCGGAAGAGTC
CACGCTCTCTAATTCGACGTTCTATTATTCGATACACTCCATTATTCAAT
ATTGAAAGTCACCGTCAAAAAGAAACTCTTATAAACGACGCTTTACCATT
CGATAAGCTCCCTTATTCGATGAAAATTCAATTTCCCTTTGAATATCGAA
TTAAAGAGTGTCAACTGTATGAGGAATCACAGTCAAAAAGAGCCTGTTAT
GAATTTGTTTGAACCATACATAGCTTAGCTAGAAGATATCTTATCTTCCA
TTATTTTCTTTCCTCAGGTAAGATCAACCCACGTGAGGCTTTACGCGAGT
TAGAACTAGCCACGCCCAAAGATGCTATGGTTTCTACTGATATCGGTAAT
GTTTGCTCAGTTGCCAATGGATATCTTCGCTTCGAAGAATCTCCAAGCTT
CTTTGCCGCTATGTCTTTTGGTAATTGTCAATACGCCTTCCCTACGATGA
TGGGCGCTAAAGTTGGACGCCCAGACCGCCCAGCTATTGCATACGTTGGT
GATGGTGCTTGGGGAATGAGTTTCAATGAATTGTTGACTTGTGTGCGAGA
ACAAATTCCAATGATCGCCGTCGTTTTCAATAATGGACAATGGGGGGCTG
AGAAGAAAAACCAGGTAAGGTTTCTCGTTAATTTCTCTTCTGCTTGTGCC
CAAGAGAACATTTGAACACTTTAACTTTATTTTGATAATTTCACGAGGCA
CTATCATGGTGTGATAATCTAAGTTTCGTTGGAAAGATTAGAACTATCTT
GAGGCTATTTTGCCCTTGAGAGTAGATCTTAGGGGGACTGAAGAGAATTC
GGTATTTTTCGGTACTTTGTTATTTTACCGGAAAAAAACGGTATTCTGAT
ATTCTTTACCCTCGGAAGCCTCACAAGATAGTGAAGTGATCAAACATTTC
TAACGTACACGTTTTTTTATAAGAACAAACTATATAAGAACATAAAGCTT
CGATGGCCAAAATTCTAAAGAACAAATTGAGAACATTTTAAGGGTTTGTG
GACTCAAAAACACCCGTTTTCTTAAGAAAATGGGTTTAAAAATGGTCACA
AAATGGTGAAAATAAGAACATTTTAAGAACATTTTTAGGCTTGAAACCCA
AAAGGTTAAGAACATCCCAAGGCTTCAAAAAATTTGGACGTTCTTACAAA
AAAACGTGTAATGATACTCAACGGTCTGTAAAGAATAAAAAAAGTGTCAC
TGGTCAATCGTGTCACTATTTGATGATTTTCCGTCTTTGGAAAGTTTAAA
AATAGCACACTTTTGATGAAATGGATTTATTGTTGTTATCTTTACCCCAG
TGGTCTTTACCAAAACTTAAGATTTGTTATCGGTTTGTTGACGAATTAGT
GAATATACGAACTTGTTTACTTAAGAAAAATGTATTTTGATTCAGCCAGA
CGTTCCATAAACAATCTCTAAACGGAGGAGTGCTTTTTACTAGTAAATTC
TTAAGTAATATCCCTAAACTGTAGCGATTATGTAATACGATTCCAGTGGT
ATAGAATGTTTTTTATGATTTATGAGGAGTGCGATTTGATTCATTCCCCG
ATATTGACATGAGGAAAATTCACGTTTTAAAAAGGTAGTAGGGGCCACTA
TGTCGCGAAAAAGCTTCCCGTGTGATGACGTGACATGACGATGACGTCAT
CGAAAAACAAAAATTTGCCAAAATTAAAAAACTTTTGGTTTTTTGGAAAG
AGTACCTTCCAGTGAACAAAAATTATTATTACGAAAAAGTCTGAAAATCC
TTTTTAAGAAGTCTATGAGCCAAAATTGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACCT
CTCAAATTTTGATCTTCTACATTCAAGGAACAATATTCAATCATAAAATC
CCTTTGCACAAGCTGCTGCACACGGGAAGACATAGTGGCCTCTACTAAGG
CCATAAACCTTTGCTGGCAGCATCCTTCAAGAAAAACAGTCTCGGAGCTA
CTGGTTAATTAGCCCAAATATTGTCTCCTCTGACTCTAAATTATTTTTTA
TAAATCCTGCACTTTTTTTGCATTTACCCTTCCTTTGTTGACAATTAGAC
AGACGATAGAACACCCCTGTCTGGAACTTTTTTTCTCAATGGGGATAAAA
AATTCCTAGTGAAATCCCAATGGGGATAGAAATTCCTTTGTTCAAAGGTT
AAAAAATTCAGTGGCAATTTTTAAAAATTGAATTTTGAACGGGGGATGAA
ATTAAAGTCAATTTCCCAGTGGGGCTGAAATTCAAAGGTATTTTTTCCCA
TTGGGGGGCGAGATTTTTGTCAAATTTTCTAGTGGGGCTGGGGTTTTAGC
GGGTCTGCGACACAGGGGTATGATAGAGGAGAAAATACACTTATTTGCGT
TATGGTCGAAAGATCCACCAAAATATTTAACTTATATGAGTAGTATTTGA
TACATTCTTTTACAAAGAGGACTCCCCTACCGTCGTTTCCCATTTCCACT
TCTTGCGATTCTTGTCACTTTTCGGGAATCTTTCCGTTACTTTCCCCGGG
ATAACCGGCATGAGATTGAAAAGGGTTTGCTTTAAAGTACGGAAAATCTT
GTGTTTACTCACGAAACTGCCAAACTTTCCGAAGCTCATTTCTTCAACTA
CCCGAAGTCCTGGTCATATTCCGCTAGTAAGGTGACAAAGGAATCTTAGT
ACGGGAATGGGAAACTTATAAAAAACGACGGTAACCCGTTTTACATGCAT
AAATCCTGTTTTTATAAAATCTAACTAAAAATTACACATCCATTAACACA
AAGAATTAGCAGGACATAAAAGATTCACACACAGTTTAAATAGTTGGGGA
ATTAAATTTGACTTCAATTTTTTTTTCAAAGGTCTTGTGGTTCGGTGATC
GATACATTGGTGTCAATTTAGACAATCCATGGTCATATGCTGAAATTGCA
CGAAGCATGAAATGTGAAGGTATCACTTGCACACACAAAGATCAAGTTGG
TAGTGCATTAACCCAGGCTCTTCAACATCAACGTGACGGAAAAACTACAG
TTATTGAACTTATGTTCAGTCGCGAACTTGGAGATCCTTTCAGACGTGAT
GCTATGAAATTACCCAAAAGATATTTGTCTAAATATCAAAGCACTATTCA
GTCACAAGAATCGTCCACTGGCCAACCTACCGATAATTAGGATTATGGGT
AATTTGTTGGGATGAAAATTAAAAGATTTTATTGAGAATTATATTTTTAA
TAGAAATTTTAAAAATCTTTTTTGTATAAATTTATTATTAAATTCTTTTG
GTTTTTTTATATTAGGGGCCTTTTTCTACTTTTTTTAATGTACAATAACA
ACATTATTTTTTTCTTGAAGGTAAATATTAGAATAACACTGAAAAAGTGA
ATTTAAAAACTAATTTGATACTGTCTAT

Coding sequence (CDS) from alignment at scaffold_102:334684..341461-

>TCONS_00045896 ID=TCONS_00045896|Name=TCONS_00045896|organism=Clytia hemisphaerica|type=CDS|length=11268bp|location=Sequence derived from alignment at scaffold_102:334684..341461- (Clytia hemisphaerica)
GTCTTGTGGTTCGGTGATCGATACATTGGTGTCAATTTAGACAATCCATG
GTCATATGCTGAAATTGCACGAAGCATGAAATGTGAAGGTATCACTTGCA
CACACAAAGATCAAGTTGGTAGTGCATTAACCCAGGCTCTTCAACATCAA
CGTGACGGAAAAACTACAGTTATTGAACTTATGTTCAGTCGCGAACTTGG
AGATCCTTTCAGACGTGATGCTATGAAATTACCCAAAAGATATTTGTCTA
AATATCAAAGCACTATTCAGTCACAAGAATCGTCCACTGGCCAACCTACC
GATAATTAGGTAAGATCAACCCACGTGAGGCTTTACGCGAGTTAGAACTA
GCCACGCCCAAAGATGCTATGGTTTCTACTGATATCGGTAATGTTTGCTC
AGTTGCCAATGGATATCTTCGCTTCGAAGAATCTCCAAGCTTCTTTGCCG
CTATGTCTTTTGGTAATTGTCAATACGCCTTCCCTACGATGATGGGCGCT
AAAGTTGGACGCCCAGACCGCCCAGCTATTGCATACGTTGGTGATGGTGC
TTGGGGAATGAGTTTCAATGAATTGTTGACTTGTGTGCGAGAACAAATTC
CAATGATCGCCGTCGTTTTCAATAATGGACAATGGGGGGCTGAGAAGAAA
AACCAGATTGGGACCTTTCGCCACCCTACCACAATATGGTTTTGACTACT
GGCCTAAAAACGCCAAAGTCATTCAAATCGAAGCCGACCCAAGACGTATC
GGATTGGTGAAACCAATTGCTGTCGGTGTAAATGGGGACGCAGGGCTTGC
TACCGATGATATCCTTGCAAGGCTCCAATTACACGGTGATGCACAAGCTT
TGGCTAACAAAAATGAACGTATCACAAAATTGAATGAAGTCCGTGAAACT
TGGGAAAATTTATTGAATGATATGACTCATGACCAAACCAATGCACGAGA
AGACGATTACATCATCAACAAACCACTCCGAGTAGAAAAATCTGCTGGCG
GACCCACATCTTTGGAAAGTGCCGCTGAACTACTTCGTGGTGCCAAGAAC
CCAGTCATCTTAGCTGGTGGTGGCGTTGTCATTGGTGGAGCCACAAATAG
TGTGAAAGCTCTTGCGGAATATTTACAAGCACCCGTTTGTACAACATATT
TACACAATGATGCTTTCCCAGCATCTCACCCACTGTGGTGTGGCCCTCTC
GGTTACCTTGGACACCAAACTGCCATGCGAACAATCCACGAAGCTGATGT
TGTCGTTGCTATAGGAACAAGGCATCACCAATTACGTCACATCTGTCGCT
GCTGCATACTGGGCCCATTCCCCTGTCGTTTGCGTCACACCTGAAGCTGG
TACAATGACCAAAGGCCTTGGTGGTTTCCAAGAATCTGACCAAATGGAGA
TCTTCAACAGCATTACAAAGTTTCAAGGACATGTTAATAACCCTGGACGT
ATGGCTGAAATCACATCACGATGCTTTGATATTGCAATGAACGAACGTGG
CCCGACTCAATTGAATATCCCACGTGACTATTTCTACCACGAAGATGCTG
CAAGCCGTTCGTAAGCAAATCTTGCCAACTTCCAACCGAGTCCTAGCTGC
TTGTTTCAACACTTCAGCAGCACAACATTCAGAAGTTCAATATGGTGTTC
CTACTAAAATGATGGCAACAGAGGCTCTGGTTGAAGCTATGGTTGCACAA
GGTGTTACCGATATTTTCGGAATTGTTGGCTCTGCTTTTATGGATCCGTT
AGATATCTTCCCGGAAGCAGGAATCCGGTTTTTGCCAGTTCAACATGAAC
AGAATGCAGGGCACATGGCTGATGGTTATTCTAGAGCAACCGGAAAACAC
GGAGTCTGCATTGCACAAAATGGCCCAGGTCTTGTGGTTCGGTGATCGAT
ACATTGGTGTCAATTTAGACAATCCATGGTCATATGCTGAAATTGCACGA
AGCATGAAATGTGAAGGTATCACTTGCACACACAAAGATCAAGTTGGTAG
TGCATTAACCCAGGCTCTTCAACATCAACGTGACGGAAAAACTACAGTTA
TTGAACTTATGTTCAGTCGCGAACTTGGAGATCCTTTCAGACGTGATGCT
ATGAAATTACCCAAAAGATATTTGTCTAAATATCAAAGCACTATTCAGTC
ACAAGAATCGTCCACTGGCCAACCTACCGATAATTAGGTAAGATCAACCC
ACGTGAGGCTTTACGCGAGTTAGAACTAGCCACGCCCAAAGATGCTATGG
TTTCTACTGATATCGGTAATGTTTGCTCAGTTGCCAATGGATATCTTCGC
TTCGAAGAATCTCCAAGCTTCTTTGCCGCTATGTCTTTTGGTAATTGTCA
ATACGCCTTCCCTACGATGATGGGCGCTAAAGTTGGACGCCCAGACCGCC
CAGCTATTGCATACGTTGGTGATGGTGCTTGGGGAATGAGTTTCAATGAA
TTGTTGACTTGTGTGCGAGAACAAATTCCAATGATCGCCGTCGTTTTCAA
TAATGGACAATGGGGGGCTGAGAAGAAAAACCAGATTGGGACCTTTCGCC
ACCCTACCACAATATGGTTTTGACTACTGGCCTAAAAACGCCAAAGTCAT
TCAAATCGAAGCCGACCCAAGACGTATCGGATTGGTGAAACCAATTGCTG
TCGGTGTAAATGGGGACGCAGGGCTTGCTACCGATGATATCCTTGCAAGG
CTCCAATTACACGGTGATGCACAAGCTTTGGCTAACAAAAATGAACGTAT
CACAAAATTGAATGAAGTCCGTGAAACTTGGGAAAATTTATTGAATGATA
TGACTCATGACCAAACCAATGCACGAGAAGACGATTACATCATCAACAAA
CCACTCCGAGTAGAAAAATCTGCTGGCGGACCCACATCTTTGGAAAGTGC
CGCTGAACTACTTCGTGGTGCCAAGAACCCAGTCATCTTAGCTGGTGGTG
GCGTTGTCATTGGTGGAGCCACAAATAGTGTGAAAGCTCTTGCGGAATAT
TTACAAGCACCCGTTTGTACAACATATTTACACAATGATGCTTTCCCAGC
ATCTCACCCACTGTGGTGTGGCCCTCTCGGTTACCTTGGACACCAAACTG
CCATGCGAACAATCCACGAAGCTGATGTTGTCGTTGCTATAGGAACAAGG
CATCACCAATTACGTCACATCTGTCGCTGCTGCATACTGGGCCCATTCCC
CTGTCGTTTGCGTCACACCTGAAGCTGGTACAATGACCAAAGGCCTTGGT
GGTTTCCAAGAATCTGACCAAATGGAGATCTTCAACAGCATTACAAAGTT
TCAAGGACATGTTAATAACCCTGGACGTATGGCTGAAATCACATCACGAT
GCTTTGATATTGCAATGAACGAACGTGGCCCGACTCAATTGAATATCCCA
CGTGACTATTTCTACCACGAAGATGCTGCAAGCCGTTCGTAAGCAAATCT
TGCCAACTTCCAACCGAGTCCTAGCTGCTTGTTTCAACACTTCAGCAGCA
CAACATTCAGAAGTTCAATATGGTGTTCCTACTAAAATGATGGCAACAGA
GGCTCTGGTTGAAGCTATGGTTGCACAAGGTGTTACCGATATTTTCGGAA
TTGTTGGCTCTGCTTTTATGGATCCGTTAGATATCTTCCCGGAAGCAGGA
ATCCGGTTTTTGCCAGTTCAACATGAACAGAATGCAGGGCACATGGCTGA
TGGTTATTCTAGAGCAACCGGAAAACACGGAGTCTGCATTGCACAAAATG
GCCCAGGTCTTGTGGTTCGGTGATCGATACATTGGTGTCAATTTAGACAA
TCCATGGTCATATGCTGAAATTGCACGAAGCATGAAATGTGAAGGTATCA
CTTGCACACACAAAGATCAAGTTGGTAGTGCATTAACCCAGGCTCTTCAA
CATCAACGTGACGGAAAAACTACAGTTATTGAACTTATGTTCAGTCGCGA
ACTTGGAGATCCTTTCAGACGTGATGCTATGAAATTACCCAAAAGATATT
TGTCTAAATATCAAAGCACTATTCAGTCACAAGAATCGTCCACTGGCCAA
CCTACCGATAATTAGGTAAGATCAACCCACGTGAGGCTTTACGCGAGTTA
GAACTAGCCACGCCCAAAGATGCTATGGTTTCTACTGATATCGGTAATGT
TTGCTCAGTTGCCAATGGATATCTTCGCTTCGAAGAATCTCCAAGCTTCT
TTGCCGCTATGTCTTTTGGTAATTGTCAATACGCCTTCCCTACGATGATG
GGCGCTAAAGTTGGACGCCCAGACCGCCCAGCTATTGCATACGTTGGTGA
TGGTGCTTGGGGAATGAGTTTCAATGAATTGTTGACTTGTGTGCGAGAAC
AAATTCCAATGATCGCCGTCGTTTTCAATAATGGACAATGGGGGGCTGAG
AAGAAAAACCAGATTGGGACCTTTCGCCACCCTACCACAATATGGTTTTG
ACTACTGGCCTAAAAACGCCAAAGTCATTCAAATCGAAGCCGACCCAAGA
CGTATCGGATTGGTGAAACCAATTGCTGTCGGTGTAAATGGGGACGCAGG
GCTTGCTACCGATGATATCCTTGCAAGGCTCCAATTACACGGTGATGCAC
AAGCTTTGGCTAACAAAAATGAACGTATCACAAAATTGAATGAAGTCCGT
GAAACTTGGGAAAATTTATTGAATGATATGACTCATGACCAAACCAATGC
ACGAGAAGACGATTACATCATCAACAAACCACTCCGAGTAGAAAAATCTG
CTGGCGGACCCACATCTTTGGAAAGTGCCGCTGAACTACTTCGTGGTGCC
AAGAACCCAGTCATCTTAGCTGGTGGTGGCGTTGTCATTGGTGGAGCCAC
AAATAGTGTGAAAGCTCTTGCGGAATATTTACAAGCACCCGTTTGTACAA
CATATTTACACAATGATGCTTTCCCAGCATCTCACCCACTGTGGTGTGGC
CCTCTCGGTTACCTTGGACACCAAACTGCCATGCGAACAATCCACGAAGC
TGATGTTGTCGTTGCTATAGGAACAAGGCATCACCAATTACGTCACATCT
GTCGCTGCTGCATACTGGGCCCATTCCCCTGTCGTTTGCGTCACACCTGA
AGCTGGTACAATGACCAAAGGCCTTGGTGGTTTCCAAGAATCTGACCAAA
TGGAGATCTTCAACAGCATTACAAAGTTTCAAGGACATGTTAATAACCCT
GGACGTATGGCTGAAATCACATCACGATGCTTTGATATTGCAATGAACGA
ACGTGGCCCGACTCAATTGAATATCCCACGTGACTATTTCTACCACGAAG
ATGCTGCAAGCCGTTCGTAAGCAAATCTTGCCAACTTCCAACCGAGTCCT
AGCTGCTTGTTTCAACACTTCAGCAGCACAACATTCAGAAGTTCAATATG
GTGTTCCTACTAAAATGATGGCAACAGAGGCTCTGGTTGAAGCTATGGTT
GCACAAGGTGTTACCGATATTTTCGGAATTGTTGGCTCTGCTTTTATGGA
TCCGTTAGATATCTTCCCGGAAGCAGGAATCCGGTTTTTGCCAGTTCAAC
ATGAACAGAATGCAGGGCACATGGCTGATGGTTATTCTAGAGCAACCGGA
AAACACGGAGTCTGCATTGCACAAAATGGCCCAGGTCTTGTGGTTCGGTG
ATCGATACATTGGTGTCAATTTAGACAATCCATGGTCATATGCTGAAATT
GCACGAAGCATGAAATGTGAAGGTATCACTTGCACACACAAAGATCAAGT
TGGTAGTGCATTAACCCAGGCTCTTCAACATCAACGTGACGGAAAAACTA
CAGTTATTGAACTTATGTTCAGTCGCGAACTTGGAGATCCTTTCAGACGT
GATGCTATGAAATTACCCAAAAGATATTTGTCTAAATATCAAAGCACTAT
TCAGTCACAAGAATCGTCCACTGGCCAACCTACCGATAATTAGGTAAGAT
CAACCCACGTGAGGCTTTACGCGAGTTAGAACTAGCCACGCCCAAAGATG
CTATGGTTTCTACTGATATCGGTAATGTTTGCTCAGTTGCCAATGGATAT
CTTCGCTTCGAAGAATCTCCAAGCTTCTTTGCCGCTATGTCTTTTGGTAA
TTGTCAATACGCCTTCCCTACGATGATGGGCGCTAAAGTTGGACGCCCAG
ACCGCCCAGCTATTGCATACGTTGGTGATGGTGCTTGGGGAATGAGTTTC
AATGAATTGTTGACTTGTGTGCGAGAACAAATTCCAATGATCGCCGTCGT
TTTCAATAATGGACAATGGGGGGCTGAGAAGAAAAACCAGATTGGGACCT
TTCGCCACCCTACCACAATATGGTTTTGACTACTGGCCTAAAAACGCCAA
AGTCATTCAAATCGAAGCCGACCCAAGACGTATCGGATTGGTGAAACCAA
TTGCTGTCGGTGTAAATGGGGACGCAGGGCTTGCTACCGATGATATCCTT
GCAAGGCTCCAATTACACGGTGATGCACAAGCTTTGGCTAACAAAAATGA
ACGTATCACAAAATTGAATGAAGTCCGTGAAACTTGGGAAAATTTATTGA
ATGATATGACTCATGACCAAACCAATGCACGAGAAGACGATTACATCATC
AACAAACCACTCCGAGTAGAAAAATCTGCTGGCGGACCCACATCTTTGGA
AAGTGCCGCTGAACTACTTCGTGGTGCCAAGAACCCAGTCATCTTAGCTG
GTGGTGGCGTTGTCATTGGTGGAGCCACAAATAGTGTGAAAGCTCTTGCG
GAATATTTACAAGCACCCGTTTGTACAACATATTTACACAATGATGCTTT
CCCAGCATCTCACCCACTGTGGTGTGGCCCTCTCGGTTACCTTGGACACC
AAACTGCCATGCGAACAATCCACGAAGCTGATGTTGTCGTTGCTATAGGA
ACAAGGCATCACCAATTACGTCACATCTGTCGCTGCTGCATACTGGGCCC
ATTCCCCTGTCGTTTGCGTCACACCTGAAGCTGGTACAATGACCAAAGGC
CTTGGTGGTTTCCAAGAATCTGACCAAATGGAGATCTTCAACAGCATTAC
AAAGTTTCAAGGACATGTTAATAACCCTGGACGTATGGCTGAAATCACAT
CACGATGCTTTGATATTGCAATGAACGAACGTGGCCCGACTCAATTGAAT
ATCCCACGTGACTATTTCTACCACGAAGATGCTGCAAGCCGTTCGTAAGC
AAATCTTGCCAACTTCCAACCGAGTCCTAGCTGCTTGTTTCAACACTTCA
GCAGCACAACATTCAGAAGTTCAATATGGTGTTCCTACTAAAATGATGGC
AACAGAGGCTCTGGTTGAAGCTATGGTTGCACAAGGTGTTACCGATATTT
TCGGAATTGTTGGCTCTGCTTTTATGGATCCGTTAGATATCTTCCCGGAA
GCAGGAATCCGGTTTTTGCCAGTTCAACATGAACAGAATGCAGGGCACAT
GGCTGATGGTTATTCTAGAGCAACCGGAAAACACGGAGTCTGCATTGCAC
AAAATGGCCCAGGTCTTGTGGTTCGGTGATCGATACATTGGTGTCAATTT
AGACAATCCATGGTCATATGCTGAAATTGCACGAAGCATGAAATGTGAAG
GTATCACTTGCACACACAAAGATCAAGTTGGTAGTGCATTAACCCAGGCT
CTTCAACATCAACGTGACGGAAAAACTACAGTTATTGAACTTATGTTCAG
TCGCGAACTTGGAGATCCTTTCAGACGTGATGCTATGAAATTACCCAAAA
GATATTTGTCTAAATATCAAAGCACTATTCAGTCACAAGAATCGTCCACT
GGCCAACCTACCGATAATTAGGTAAGATCAACCCACGTGAGGCTTTACGC
GAGTTAGAACTAGCCACGCCCAAAGATGCTATGGTTTCTACTGATATCGG
TAATGTTTGCTCAGTTGCCAATGGATATCTTCGCTTCGAAGAATCTCCAA
GCTTCTTTGCCGCTATGTCTTTTGGTAATTGTCAATACGCCTTCCCTACG
ATGATGGGCGCTAAAGTTGGACGCCCAGACCGCCCAGCTATTGCATACGT
TGGTGATGGTGCTTGGGGAATGAGTTTCAATGAATTGTTGACTTGTGTGC
GAGAACAAATTCCAATGATCGCCGTCGTTTTCAATAATGGACAATGGGGG
GCTGAGAAGAAAAACCAGATTGGGACCTTTCGCCACCCTACCACAATATG
GTTTTGACTACTGGCCTAAAAACGCCAAAGTCATTCAAATCGAAGCCGAC
CCAAGACGTATCGGATTGGTGAAACCAATTGCTGTCGGTGTAAATGGGGA
CGCAGGGCTTGCTACCGATGATATCCTTGCAAGGCTCCAATTACACGGTG
ATGCACAAGCTTTGGCTAACAAAAATGAACGTATCACAAAATTGAATGAA
GTCCGTGAAACTTGGGAAAATTTATTGAATGATATGACTCATGACCAAAC
CAATGCACGAGAAGACGATTACATCATCAACAAACCACTCCGAGTAGAAA
AATCTGCTGGCGGACCCACATCTTTGGAAAGTGCCGCTGAACTACTTCGT
GGTGCCAAGAACCCAGTCATCTTAGCTGGTGGTGGCGTTGTCATTGGTGG
AGCCACAAATAGTGTGAAAGCTCTTGCGGAATATTTACAAGCACCCGTTT
GTACAACATATTTACACAATGATGCTTTCCCAGCATCTCACCCACTGTGG
TGTGGCCCTCTCGGTTACCTTGGACACCAAACTGCCATGCGAACAATCCA
CGAAGCTGATGTTGTCGTTGCTATAGGAACAAGGCATCACCAATTACGTC
ACATCTGTCGCTGCTGCATACTGGGCCCATTCCCCTGTCGTTTGCGTCAC
ACCTGAAGCTGGTACAATGACCAAAGGCCTTGGTGGTTTCCAAGAATCTG
ACCAAATGGAGATCTTCAACAGCATTACAAAGTTTCAAGGACATGTTAAT
AACCCTGGACGTATGGCTGAAATCACATCACGATGCTTTGATATTGCAAT
GAACGAACGTGGCCCGACTCAATTGAATATCCCACGTGACTATTTCTACC
ACGAAGATGCTGCAAGCCGTTCGTAAGCAAATCTTGCCAACTTCCAACCG
AGTCCTAGCTGCTTGTTTCAACACTTCAGCAGCACAACATTCAGAAGTTC
AATATGGTGTTCCTACTAAAATGATGGCAACAGAGGCTCTGGTTGAAGCT
ATGGTTGCACAAGGTGTTACCGATATTTTCGGAATTGTTGGCTCTGCTTT
TATGGATCCGTTAGATATCTTCCCGGAAGCAGGAATCCGGTTTTTGCCAG
TTCAACATGAACAGAATGCAGGGCACATGGCTGATGGTTATTCTAGAGCA
ACCGGAAAACACGGAGTCTGCATTGCACAAAATGGCCCAGGTCTTGTGGT
TCGGTGATCGATACATTGGTGTCAATTTAGACAATCCATGGTCATATGCT
GAAATTGCACGAAGCATGAAATGTGAAGGTATCACTTGCACACACAAAGA
TCAAGTTGGTAGTGCATTAACCCAGGCTCTTCAACATCAACGTGACGGAA
AAACTACAGTTATTGAACTTATGTTCAGTCGCGAACTTGGAGATCCTTTC
AGACGTGATGCTATGAAATTACCCAAAAGATATTTGTCTAAATATCAAAG
CACTATTCAGTCACAAGAATCGTCCACTGGCCAACCTACCGATAATTAGG
TAAGATCAACCCACGTGAGGCTTTACGCGAGTTAGAACTAGCCACGCCCA
AAGATGCTATGGTTTCTACTGATATCGGTAATGTTTGCTCAGTTGCCAAT
GGATATCTTCGCTTCGAAGAATCTCCAAGCTTCTTTGCCGCTATGTCTTT
TGGTAATTGTCAATACGCCTTCCCTACGATGATGGGCGCTAAAGTTGGAC
GCCCAGACCGCCCAGCTATTGCATACGTTGGTGATGGTGCTTGGGGAATG
AGTTTCAATGAATTGTTGACTTGTGTGCGAGAACAAATTCCAATGATCGC
CGTCGTTTTCAATAATGGACAATGGGGGGCTGAGAAGAAAAACCAGATTG
GGACCTTTCGCCACCCTACCACAATATGGTTTTGACTACTGGCCTAAAAA
CGCCAAAGTCATTCAAATCGAAGCCGACCCAAGACGTATCGGATTGGTGA
AACCAATTGCTGTCGGTGTAAATGGGGACGCAGGGCTTGCTACCGATGAT
ATCCTTGCAAGGCTCCAATTACACGGTGATGCACAAGCTTTGGCTAACAA
AAATGAACGTATCACAAAATTGAATGAAGTCCGTGAAACTTGGGAAAATT
TATTGAATGATATGACTCATGACCAAACCAATGCACGAGAAGACGATTAC
ATCATCAACAAACCACTCCGAGTAGAAAAATCTGCTGGCGGACCCACATC
TTTGGAAAGTGCCGCTGAACTACTTCGTGGTGCCAAGAACCCAGTCATCT
TAGCTGGTGGTGGCGTTGTCATTGGTGGAGCCACAAATAGTGTGAAAGCT
CTTGCGGAATATTTACAAGCACCCGTTTGTACAACATATTTACACAATGA
TGCTTTCCCAGCATCTCACCCACTGTGGTGTGGCCCTCTCGGTTACCTTG
GACACCAAACTGCCATGCGAACAATCCACGAAGCTGATGTTGTCGTTGCT
ATAGGAACAAGGCATCACCAATTACGTCACATCTGTCGCTGCTGCATACT
GGGCCCATTCCCCTGTCGTTTGCGTCACACCTGAAGCTGGTACAATGACC
AAAGGCCTTGGTGGTTTCCAAGAATCTGACCAAATGGAGATCTTCAACAG
CATTACAAAGTTTCAAGGACATGTTAATAACCCTGGACGTATGGCTGAAA
TCACATCACGATGCTTTGATATTGCAATGAACGAACGTGGCCCGACTCAA
TTGAATATCCCACGTGACTATTTCTACCACGAAGATGCTGCAAGCCGTTC
GTAAGCAAATCTTGCCAACTTCCAACCGAGTCCTAGCTGCTTGTTTCAAC
ACTTCAGCAGCACAACATTCAGAAGTTCAATATGGTGTTCCTACTAAAAT
GATGGCAACAGAGGCTCTGGTTGAAGCTATGGTTGCACAAGGTGTTACCG
ATATTTTCGGAATTGTTGGCTCTGCTTTTATGGATCCGTTAGATATCTTC
CCGGAAGCAGGAATCCGGTTTTTGCCAGTTCAACATGAACAGAATGCAGG
GCACATGGCTGATGGTTATTCTAGAGCAACCGGAAAACACGGAGTCTGCA
TTGCACAAAATGGCCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029322XLOC_029322Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045896-proteinTCONS_00045896-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045896-exon-scaffold_102-1575043694:341024..341461TCONS_00045896-exon-scaffold_102-1575043694:341024..341461Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1575043694:340219..340491TCONS_00045896-exon-scaffold_102-1575043694:340219..340491Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1575043694:339568..339886TCONS_00045896-exon-scaffold_102-1575043694:339568..339886Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1575043694:339059..339354TCONS_00045896-exon-scaffold_102-1575043694:339059..339354Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1575043694:338398..338744TCONS_00045896-exon-scaffold_102-1575043694:338398..338744Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1575043694:334684..335230TCONS_00045896-exon-scaffold_102-1575043694:334684..335230Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1510915933:341024..341461TCONS_00045896-exon-scaffold_102-1510915933:341024..341461Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1510915933:340219..340491TCONS_00045896-exon-scaffold_102-1510915933:340219..340491Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1510915933:339568..339886TCONS_00045896-exon-scaffold_102-1510915933:339568..339886Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1510915933:339059..339354TCONS_00045896-exon-scaffold_102-1510915933:339059..339354Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1510915933:338398..338744TCONS_00045896-exon-scaffold_102-1510915933:338398..338744Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1510915933:334684..335230TCONS_00045896-exon-scaffold_102-1510915933:334684..335230Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1491911889:341024..341461TCONS_00045896-exon-scaffold_102-1491911889:341024..341461Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1491911889:340219..340491TCONS_00045896-exon-scaffold_102-1491911889:340219..340491Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1491911889:339568..339886TCONS_00045896-exon-scaffold_102-1491911889:339568..339886Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1491911889:339059..339354TCONS_00045896-exon-scaffold_102-1491911889:339059..339354Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1491911889:338398..338744TCONS_00045896-exon-scaffold_102-1491911889:338398..338744Clytia hemisphaericaexon
TCONS_00045896-exon-scaffold_102-1491911889:334684..335230TCONS_00045896-exon-scaffold_102-1491911889:334684..335230Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:334684..341461 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.13378	4.92022	2.7965	2.69685	6.92318	6.86199	11.7036	11.615	30.1789	14.5474	7.45327	60.2978	277.615	275.951	472.681	868.937	346.52	302.911	364.027	369.527	229.538	267.517	177.155	164.204	42.3527	35.2123	57.1621	77.4502	313.982	204.927
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012000Thiamin_PyroP_enz_cen_dom
IPR017820Sulphoacetald_Actrfrase
IPR012001Thiamin_PyroP_enz_TPP-bd_dom
IPR011766TPP_enzyme-bd_C
IPR029035DHS-like_NAD/FAD-binding_dom
IPR029061THDP-binding
Vocabulary: Molecular Function
TermDefinition
GO:0030976thiamine pyrophosphate binding
GO:0000287magnesium ion binding
GO:0050487sulfoacetaldehyde acetyltransferase activity
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0019529taurine catabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019529 taurine catabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003824 catalytic activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0050487 sulfoacetaldehyde acetyltransferase activity
molecular_function GO:0030976 thiamine pyrophosphate binding
Blast
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BLAST of TCONS_00045896 vs. Swiss-Prot (Human)
Match: HACL1 (2-hydroxyacyl-CoA lyase 1 OS=Homo sapiens GN=HACL1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 4.118e-24
Identity = 125/495 (25.25%), Postives = 207/495 (41.82%), Query Frame = 3 
Query:  231 EALVEAMVAQGVTDIFGIVGSAFMDPLDIFPEAGIRFLPVQHEQNAGHMADGYSRATGKHGVCIAQNGPGITNYVTSVAAAYWAHSPVVCVTPEAGTMTKGLGGFQESDQMEIFNSITKFQGHVNNPGRMAEITSRCFDIAMNER-GPTQLNIPRDYFYHEDDYIINKPLRVEKSAGGPTSLE------SAAELLRGAKNPXXXXXXXXXXXXXTNSVKALAEYLQAPVCTTYLHNDAFPASHPLWCGPLGYLGHQTAMRTIHEADVVVAIGTRLG---PFATLPQYGFDYWPKNAKVIQIEADPRRIG-LVKPIAVGVNGDAGLATDDILARLQLHGDAQALANKNERITKLNEVRETWENLLNDMTHDQTNAREGK------INPREALRELELATPKDAMV------STDIGNVCSVANGYL-RFEESPSFFAAMSFGNCQYAFPTMMGAKVGRPDRPAIAYVGDGAWGMSFNELLTCVREQIPMIAVVFNN 1643
            + + +A+  Q V  IFGIVG    +      + GI+++ +++EQ A + A      T + GVC+  +GPG+ + +  +A A     P++ +   +    + +G FQE  Q+E     TKF    ++   +  +  +    ++  R G   ++IP D+   + +  +N    +E+    P S+       +AA ++R AK P+++ G G     A  S+K L E  + P   T +     P +HP   G           R +  ADV+V  G RL     F   P+Y  D      K IQ++     +G  VKP AV + G+    T  +L  L    D        E         + W+ L   M  ++  ++E        +N       ++   P+D  V      + DIG   +V   YL R       F  M  G   +A    + AK   P +  I   GD A+G S  E+ T  R  +P+I +V NN
Sbjct:   18 KVIAQALKTQDVEYIFGIVGIPVTEIAIAAQQLGIKYIGMRNEQAACYAASAIGYLTSRPGVCLVVSGPGLIHALGGMANANMNCWPLLVIGGSSERNQETMGAFQEFPQVEACRLYTKFSARPSSIEAIPFVIEKAVRSSIYGRPGACYVDIPADFVNLQVN--VNSIKYMERCMSPPISMAETSAVCTAASVIRNAKQPLLIIGKGAAYAHAEESIKKLVEQYKLPFLPTPMGKGVVPDNHPYCVG-------AARSRALQFADVIVLFGARLNWILHFGLPPRYQPD-----VKFIQVDICAEELGNNVKP-AVTLLGNIHAVTKQLLEEL----DKTPWQYPPE--------SKWWKTLREKMKSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDIGR--TVLQNYLPRHRLDAGTFGTMGVG-LGFAIAAAVVAKDRSPGQWIICVEGDSAFGFSGMEVETICRYNLPIILLVVNN 482
The following BLAST results are available for this feature:
BLAST of TCONS_00045896 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HACL14.118e-2425.252-hydroxyacyl-CoA lyase 1 OS=Homo sapiens GN=HACL1... [more]
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