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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045908 ID=TCONS_00045908|Name=TCONS_00045908|organism=Clytia hemisphaerica|type=transcript|length=1273bp
caaatatttgacaaaaatccactttttggagattttgacaatttttgttc
GACAAGTGATCCTTTGatcctccaaatttggccctgttttactttattct
atCCTCTagcgaattgatttgaagttttaccactggacaCCTTTCCgtca
ttcagtcaggtccgcgcagcttTGATTCCAACCTCCCCCCCCCTTAGCCG
CCGCCCACTTCGTGCTTTCTAAATTGGGCGCCACCGAAAGTACCCAAAAC
AAAAAGGTATCCAAGCTATCCAATGAGCTatgaacgagcttctaactcat
TTTAGATCCGGAGatagcctttaaagtttgaactagcggttttcttaaaa
aacttaCCGTTGGACCGTTTAagcccaaaaagttaagaacactctAAGAT
TTTAAAAGGTTTTGACGTGCTtatacaaaagaaaaacttgTAGGTTACTA
CACTTTGCTCTTATTAAACCTGAGAATGGTCGATAGAATGTATTGACTGC
ACCAAGAAGTTCCTTTATATTGATGGTAACCTGGAGATAACTGTTATTCA
GACATTATTAATCATTGTTTACGATATTTCCTTAAACTGTCATCATTAAA
CTATACCTACAGTTAATTACCGTCTAATTTTCACTTAATTGCATCTCATC
TCTTCACGTTGGTAGTGAATGCCATGCCTCATCTTTAAGAGATTGGATGA
AGTTGAACTGAAGTTTAGATTTGTGTAATAGTTTGTGTGGAGGGTCGTGT
TTCTTTTGATGAGAAAATATAGGAGTTGGCTCTCCATAATTCGATGACGC
AAGATGACGTTCGTGTTATGGAGAAGAATGTGGTTTATTTAATGCGGTCA
GAAGTCTGGTTCGCGTTTTAGGAGGGAGTTCAATTTATAAATATTACAAT
GTATCTTTATTTTTGTAGAGAATTTATAATTGACGCCGGAATCTGAATCT
TAAAAGAGATTGGGTAAAAGGGATAAAAGTTAAACTAACGTTCAGATTTG
TGTAATAGTTTGTGTGTGGAGTCATTTTTTTGATGAGACAATAGAGGAGG
GTCAACATAATGTAATAATAGTGTCCCTGTCTTTAGGGTCGGAAGAAGTC
TGAAGATAGCTGACAGGGTCTCAAATTTACTATGTAATTTTTAAGACGTG
TATTTGGTAGAGTCGACTTTTGGCTATTTGGGTGGAAATCTTTCGTTCTG
ACAGGGCCCAAATTTACTAAACATTCATATCTTACatggtccacttttca
aactacaGCGGCGCACGTCTcca Run BLAST on NCBI transcript from alignment at scaffold_102:159251..160523 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045908 ID=TCONS_00045908|Name=TCONS_00045908|organism=Clytia hemisphaerica|type=transcript|length=1273bp|location=Sequence derived from alignment at scaffold_102:159251..160523 (Clytia hemisphaerica)
tggAGACGTGCGCCGCtgtagtttgaaaagtggaccatGTAAGATATGAA
TGTTTAGTAAATTTGGGCCCTGTCAGAACGAAAGATTTCCACCCAAATAG
CCAAAAGTCGACTCTACCAAATACACGTCTTAAAAATTACATAGTAAATT
TGAGACCCTGTCAGCTATCTTCAGACTTCTTCCGACCCTAAAGACAGGGA
CACTATTATTACATTATGTTGACCCTCCTCTATTGTCTCATCAAAAAAAT
GACTCCACACACAAACTATTACACAAATCTGAACGTTAGTTTAACTTTTA
TCCCTTTTACCCAATCTCTTTTAAGATTCAGATTCCGGCGTCAATTATAA
ATTCTCTACAAAAATAAAGATACATTGTAATATTTATAAATTGAACTCCC
TCCTAAAACGCGAACCAGACTTCTGACCGCATTAAATAAACCACATTCTT
CTCCATAACACGAACGTCATCTTGCGTCATCGAATTATGGAGAGCCAACT
CCTATATTTTCTCATCAAAAGAAACACGACCCTCCACACAAACTATTACA
CAAATCTAAACTTCAGTTCAACTTCATCCAATCTCTTAAAGATGAGGCAT
GGCATTCACTACCAACGTGAAGAGATGAGATGCAATTAAGTGAAAATTAG
ACGGTAATTAACTGTAGGTATAGTTTAATGATGACAGTTTAAGGAAATAT
CGTAAACAATGATTAATAATGTCTGAATAACAGTTATCTCCAGGTTACCA
TCAATATAAAGGAACTTCTTGGTGCAGTCAATACATTCTATCGACCATTC
TCAGGTTTAATAAGAGCAAAGTGTAGTAACCTAcaagtttttcttttgta
taAGCACGTCAAAACCTTTTAAAATCTTagagtgttcttaactttttggg
ctTAAACGGTCCAACGGtaagttttttaagaaaaccgctagttcaaactt
taaaggctatCTCCGGATCTAAAatgagttagaagctcgttcatAGCTCA
TTGGATAGCTTGGATACCTTTTTGTTTTGGGTACTTTCGGTGGCGCCCAA
TTTAGAAAGCACGAAGTGGGCGGCGGCTAAGGGGGGGGGAGGTTGGAATC
AaagctgcgcggacctgactgaatgacGGAAAGGtgtccagtggtaaaac
ttcaaatcaattcgctAGAGGatagaataaagtaaaacagggccaaattt
ggaggatCAAAGGATCACTTGTCgaacaaaaattgtcaaaatctccaaaa
agtggatttttgtcaaatatttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045908-exon-scaffold_102-1491911889:159251..160523 | TCONS_00045908-exon-scaffold_102-1491911889:159251..160523 | Clytia hemisphaerica | exon |
| TCONS_00045908-exon-scaffold_102-1510915933:159251..160523 | TCONS_00045908-exon-scaffold_102-1510915933:159251..160523 | Clytia hemisphaerica | exon |
| TCONS_00045908-exon-scaffold_102-1575043694:159251..160523 | TCONS_00045908-exon-scaffold_102-1575043694:159251..160523 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_102 | supercontig | scaffold_102:159251..160523 . |
Blast
The following BLAST results are available for this feature:
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