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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045933 ID=TCONS_00045933|Name=TCONS_00045933|organism=Clytia hemisphaerica|type=transcript|length=165bp
ATCAACCATCCACATGTGAATGGGTCTTTAAAAAAGGAGATGAGATATCG
GCCATTGCAATaGCTGAGAAGGAAGGCAATCTTATCAATATTTACGATGG
GAGGGGTGTGAACACGCCTATACATGTCTTGAAACACCATACCAAACCAG
TAACGTGTATTCGAG Run BLAST on NCBI transcript from alignment at scaffold_104:34966..35819+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045933 ID=TCONS_00045933|Name=TCONS_00045933|organism=Clytia hemisphaerica|type=transcript|length=854bp|location=Sequence derived from alignment at scaffold_104:34966..35819+ (Clytia hemisphaerica)
ATCAACCATCCACATGTGAATGGGTCTTTAAAAAAGGAGATGAGATATCG
GCCATTGCAATGTAAGGATCACATAATAAATAAAAACGACTCTTAAGGGT
GCCTGCGTACATGAAATAGAACCTTTGTTATGCTTCTTGATATAGTGTAC
ACACATTGAATACGTGtatgtttttatgaaagttaTTATTTGTCACATGT
TTTTTGAGCCTATAGATGATTTCGTTTGTTCACGTTTTTACTTACTTTAG
GCACGTTCTGCTAAAGTTTTGGCAGGCATAAAACATAGGGTAAAAGCTTG
TAATATGTGAAACTTTCTCAGTAAATCGAAaagtttcaataatttttttt
catctttatgtattttttgtatctaacaacaacaaaaaacataccAAAGC
TTCAACCATCAAactctttttaaaagaaagttaactcaaaataatttcac
tgTTACAGCAAAACACTCCAGTTTCTTGCCTGCCATAAATCATGCAACTA
tgagtttttcaaaacaaaacgcgTCATAGGCGAAATCATCTATACTAAAT
GCTTCGGAAGGCAATATCGTAAGCTCATACAAAGGATATTGTTCTCACCA
GTTCAGGATAATAGTTTTTGACGTTGATCATACTTTAttctttttattag
aacaaaaaaatatacaGTTTTTTCGTAATTATAGTTTCATGACTGTATTA
TTTAGTCAATCATCAGCGAATTCATCATCAttcttttttatatgttttag
aGCTGAGAAGGAAGGCAATCTTATCAATATTTACGATGGGAGGGGTGTGA
ACACGCCTATACATGTCTTGAAACACCATACCAAACCAGTAACGTGTATT
CGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045933-exon-scaffold_104-1491911889:34966..35026 | TCONS_00045933-exon-scaffold_104-1491911889:34966..35026 | Clytia hemisphaerica | exon |
| TCONS_00045933-exon-scaffold_104-1510915933:34966..35026 | TCONS_00045933-exon-scaffold_104-1510915933:34966..35026 | Clytia hemisphaerica | exon |
| TCONS_00045933-exon-scaffold_104-1575043694:34966..35026 | TCONS_00045933-exon-scaffold_104-1575043694:34966..35026 | Clytia hemisphaerica | exon |
| TCONS_00045933-exon-scaffold_104-1491911889:35716..35819 | TCONS_00045933-exon-scaffold_104-1491911889:35716..35819 | Clytia hemisphaerica | exon |
| TCONS_00045933-exon-scaffold_104-1510915933:35716..35819 | TCONS_00045933-exon-scaffold_104-1510915933:35716..35819 | Clytia hemisphaerica | exon |
| TCONS_00045933-exon-scaffold_104-1575043694:35716..35819 | TCONS_00045933-exon-scaffold_104-1575043694:35716..35819 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_104 | supercontig | scaffold_104:34966..35819 + |
Blast
The following BLAST results are available for this feature:
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