|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046005 ID=TCONS_00046005|Name=TCONS_00046005|organism=Clytia hemisphaerica|type=transcript|length=2039bp
CTTCGGTTGATTCAAGAAAGCTGATAAGaaaaacaaaaaccaaataCAGG
ATGTCCATCGCCGACACACAAACAGTACTCATTTTTATCTTAGTGAGTGT
GTTCACGCATCCTTCACTGACAATTGAGCAAGGGAAGTGTGACCAGACAT
GTCAGCCTGGTTCGTTTAAAGTCAATATCACTGGTAACACCAACTGTACG
TCAATATGTAAACCATGTCCTAAGGATTCGATCACTAACGATACAGACCT
CACATCTTGTATGAAGTGCCAACCTAAAGAGGTATCTAATCCGGCACGTA
CAAAATGTCAAGTCTATGGTATTTCCGTATACTCGCTCGCCCGTCCGGCT
GGTATTCTGACCTTGATTTGTCTTTCCGTAATGGCGTTCGTTCTGCTCAT
GGCTTTTATCGTGTTGGTCAAGAATAAGAATCATCAACTCGTCCTAATGT
GTGGCTACCATGGCTTGATCTTGTTCCTGATTGGCTGCGCTATCGTTCTA
CTCTCCTCAGTCCCCTTGCTGGCGAAACCCAGCGTCGGAGGGTGTTCCGT
TTTTATCGGGTTATTCAGTATCGGTTTAACCATCATTTTCGCGGTCTTGA
TTTCGAGGAGTGGATTTGCGAACAGTTTTTACGACGAGAATAACGAGATT
GTTAAACGTGGTTGCGGGCAACGACCTCGACTTCATCTCATTCTCCTGGT
TGTTTCCATACAGCTCCTGTTTTTGATCATCGGATTATCTGCTATGAAAC
CGGAAACGATGGAACTGGCAACGGAAACCTGGCACATCCGGTACTTAGAA
TGTTCAAATTGGGCCAGTCTTGTATTTTGGGTGGCGTTCGCTTATAATGT
TGTTTTAAGCTTGGTGGGAAACTTCTTGTCGTGTAGCTCCACTGATATGG
ATGAAAGATGCCAAGAATTACGTCATGTTTTGCTGTCGTATCTTATGTTT
TACGTCATGGCGTTACTTCACATCATTCTTCTCTTCCGTGTGGTAAATGA
ACAACTTGCGGAGGGACAAGCCATATTATGCGTGTTGTATACCCTAGGGT
TTTTCTTGTGTTATATTGCACcgaaaatttatattattatgTATTATACA
AAGGAAGATGGCGTCACTATTCAACCTGAAAGACTTTTACATGATCATGA
ACATCAAGAAAGTCATGGGACGTCACTCATTCACGCTAAAGATGGGTACA
AACATCATATTGTTGGAATGAAAGTCAAATCCGTCGCTTAAGTGTTGTTC
GACATTGTTGTGGACGAAAGGAGAATATTTTGGGATTCCCTCGCCACTTT
ATGCCATGTTGAAAGTATTTATGTTAAATTACGTTACAATGGATTTTGTG
ATACTCACGTGTTAACATTGTTGTGGATGAAAGGCGAAAATATTATTGGG
CTATCTCTGTTGTCTCGCTGAaatgagaaaactttttttttggtatctCG
CTGATTCAACAGATCCCTGCTCATGGACTCGCTAATAGTGAATTGAAGTG
GACATGAAATTAGAATTTTCATAGAACCGCCTCGTCGACAGCTTGAACta
taaatttatgaaatttcacCATGAAAAGAACCAAACTTTTAGTTTAAATA
AAACACATCTGtttcagaaatcttgaaaactgCTGCTCAAAAATCTGTCA
GAGAGACAACAATTTGCAACTgactttcattgaatttaaacaaCTTTTTG
CCGTATAGTTTTTGCACCTTCTTTATCAAAATGGGAAaagtcactgaaac
agggttgttAAAGGTCTTAGCAGGCTACTTTTAAGAGAGCGACAGTGCTG
AACTGTTAGGGTTTGAAAAAGCTAGCGATAGAAATTTCTTTATGGTTAAT
GTATCATAACTTAGGAATGTATATTTTCTcgatttgtaatttttaatgtt
tgtaatatttccttttggCCAATGAATTTTTCGTATAGTAAAAGTTATCT
TCCccttaaaatgtaattttaataattgaaatttaatcaaaaaatGTTTA
CTTGACTGAACGACCCTTTTGTTCAGATatctaaaaaaa Run BLAST on NCBI protein sequence of TCONS_00046005-protein >TCONS_00046005-protein ID=TCONS_00046005-protein|Name=TCONS_00046005-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
SVDSRKLIRKTKTKYRMSIADTQTVLIFILVSVFTHPSLTIEQGKCDQTC
QPGSFKVNITGNTNCTSICKPCPKDSITNDTDLTSCMKCQPKEVSNPART
KCQVYGISVYSLARPAGILTLICLSVMAFVLLMAFIVLVKNKNHQLVLMC
GYHGLILFLIGCAIVLLSSVPLLAKPSVGGCSVFIGLFSIGLTIIFAVLI
SRSGFANSFYDENNEIVKRGCGQRPRLHLILLVVSIQLLFLIIGLSAMKP
ETMELATETWHIRYLECSNWASLVFWVAFAYNVVLSLVGNFLSCSSTDMD
ERCQELRHVLLSYLMFYVMALLHIILLFRVVNEQLAEGQAILCVLYTLGF
FLCYIAPKIYIIMYYTKEDGVTIQPERLLHDHEHQESHGTSLIHAKDGYK
HHIVGMKVKSVA Run BLAST on NCBI transcript from alignment at scaffold_105:556954..569567+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046005 ID=TCONS_00046005|Name=TCONS_00046005|organism=Clytia hemisphaerica|type=transcript|length=12614bp|location=Sequence derived from alignment at scaffold_105:556954..569567+ (Clytia hemisphaerica)
CTTCGGTTGATTCAAGAAAGCTGATAAGGTATTCATCATGGAATTATACT
CTTTTTTTGATTTCCTGTTTTGTCTCTAGGCTTCACTGACCTCTTGATTC
ACTAAGTTTTTGTGATACCTTCATCTGAAGAGGCTTCCCAGTTGACACAC
aaggttgtttcaacgtccatctaacgttatttcaacgtccatctcacatt
gtttcaacgtttatcttaCGTTTTTAAACGTCCAtctcaacgttcatcta
acgttgtttcaacgttcatcaaCGTTCATCTCACGTTACgaacattagat
aaacattGAAACCTTGTAAATATCATTTTCCTTGTAAATATTTGTTAAAT
AAAGTCCGTGTGGGAACctctttaactctttaaattcaaaaggatgCATG
ATTTTGTCTGAGCTTTGTAGCATAGTGcacgtttctttataagaacaaac
tatataagaacaaaaggctttgattgccaaaatattagggaacaagttaa
gaacattttaagactttgcggactctaaaaaaAACCGATTACTTAGGaag
atggacaaaaatactcgcaaaattaagaacatttttaggcctaaaaccta
aaaagttaagaacaaccaaaggcttcaaaaattgtggatgttcttataaa
aataaacgtGTATTATAAGTATGCACATTTCCCACTTTTATCTCTATGTA
CAATGGAAATTGTTTGTAAGGGTCATACCTTTTAACTGCTTGACGTtctc
aaaaagctaaaaatcgcatttttaagatttttcaatcCTTTAACTTTGAA
TCGAATTATCTCGGCTTTGGTGATAGCTATTAACCCTTAATGTttggtac
cgttggaaagctctttcaaaGCTCTATCTTTCCATTTTTGAATTAGTTCC
TCAATCAAAACTACCGGCAGCCGAAAATATCGTTCCTGAAAGAACAAAAT
TTCGCTTGTCAAGGAGTCAAAATTCAAGTGCCTTTTTGCCCTATTCGCCA
GTATACTCGTTTTGACAAGGCCGAAGCTAGCACTAAACATTTTGGCCAGG
CTCTTGTGAAAGGCCCTTGAAATCTAAGCGTTTACTATTCATCTGTTATC
TGTTAAtatgttgttttttcgaagagtGACCTTTCAAAACACAACACATA
GCTTTATGTTTTTTTGACATGACTTCCAATCCCTTGTTTTGATTAAGGTC
AAATTTCGAAACGTTCACGACTCGTTtgtgttttgaattgaaaagatttt
aatttttgcatAGATTTATGTTCAAGGTTTGGACAATTTTAGACTTGTTT
ATAATTTGAGGGTTTAACTTAAAGTTATTCTTACCTGAAGGGAGAGAAAT
CTTGGTTGAGTTGAGGAAATATTCAAGTCACAAAGTTTCTAGGTGGAAGG
ATTCCATTGTTACTTGGCATTCTTTGGCAGGGTATTTTTGCCTTTCagaa
atttttgtataaaagtcgCCTTCAGCTTTTTCACTTGTCAGGAATAGTTt
gcaatattttttgaaatctatgaagcaaacttttctcctttttttataag
aacatccaaaatgtttgaagcctcttgattttctttgtgagtttcaagcc
taaaaatgttcttgacatgttcttattttcactatttttggagcattttt
ttaatattttcctaggaaattgatttttagattccgtaaagccttaaaat
gttcttaacttgttcttcgtatcttttttataagaacgattttataagaa
cacgaggttCAATTGTAgataaaaacttagaaaaaaattctaacCTCGAA
TTTCAGTGAATGCTAATTTTTTCTCAATAAGTGAATTaaatatattaaga
acatttaaagaatatttttaatcCTGAGAACAGTCTAGccttaagtcaaa
atttactggCTCTCAAAAAATGTGTGTACATGGGTAGTTTCAAACTCGCT
ACGGATTCCCAGGTCGAGTCTACAAATAAATGTTGAGttctatttcattt
tttcaaatccCATATGGAAGGGTCTAGCATGTCACATACGTCAAATAATC
CATCAATTTTAAACAAGAACCCCTTAAGATTGTTTGACGTATGCCCTCTG
TCTGTGAGACGATGTGACGTGATTGGTTTGTGGAGGGagctgaaaatgaa
gaagaagaagtgaAGAAGTTATGTAAGGGAAAGATTTAATTAAAGCCACA
CATCTTGTTATTGATAGACTCGGTTTAGGTTTATTCGAGACTCTCTCTTT
TGACCTGGGGACGTCCCAAGGAGCTTTTTTGCACAgatttttggtttgtt
tttattaaaaatagaTTTATTTAAAACGAGATCTCTCTCAGTAGGGTGAA
CATAACTAAGATGGTTGCTTAGTGATTTGTTAAGATCTGGTTTTCataaa
ttatattttgtttttaaaaataaattaaatattgaacattttttttctcg
atttgatTTGTGTTTAAACAGTTGAATGGGGAAGCTTGAATAGGTCGTAA
ATCCACTTTTAATTTGAAAAGTGTGGAAGGATTTCTAGCTGCACATTATT
TTGcacattattttttctttgttttgggtTTTATGTTGACGAAATTAAGT
TCTCCTTAATGAGAGACAGAATGAGAAAATCTTTTGGTTGGAAAAATTTG
CTTGGGTAActgcacacttttttataagaatatttatgatgaaactgggc
aaaaaattaagaatatgataagaatatcaccatcatgaaatttagCAACT
GAGCCTAAGAATGTCCTTTTTAAAGCAATTTACCATTAAATTTGTCAATT
ATTACCCAGCAATGCTAAAAGGTTccacaaaaatgcaaaaatcttGCTTG
AGGTTACATGTTAGATTTTGGCTTAGATTGGAtccaaacctaagaatacc
gtaagaatatttcaggatgattttttctaaaaaggtaagaatattcatga
tggaTTAacaaacaccattcttataaaaaatcgtgtagtctaccatttta
gaccTTAGTGTTTTAGAGTTCATAAAGACTTaactaaaatgttcttaact
tgttcttagcattttggccatccaagccttgttttcttataaagtttgtt
cttataaaaaaacgtgtatgccttcgaatctttttgtggATATTGCTATT
CCTGGTTATTGAGATTTTGAAGTTTTCTTGATTTGTTAGGTCGTCACTTT
TTTCTATGTCTTTCGTTGTTCTCGCCATCTTCGAAAAATCTATCATAAAC
TCTTGAAAATTGTCAGAACGAAAGAACATATGTTCTGTAAAACATATCCA
CGTTGTTTATGAGATGATATGAGTTTGATAAAGGAGAGATGATTGAAATC
TAATTGTTTTGAGAGATGGAAATCGTCAATGTTTTGTGTCGCTCGTCTTT
TAAGCCTCGTTCTAAATGGAGGATTAATCAAATTCAAATGATGAACATAT
AACACATGTTTTACATTTCTACGCTGTGAAGTTGTATTTTTGTTGGGCTg
acttaaaagttttgtttttaaataagagtgatttcgtttgcttactcatc
acttttaatttcaagcctttttcacattggattgacacgtatgtgtagca
agattggtcagaaagtggaaaagaaaaacatattttcgtTTATATcaaca
taatataacaaaaggcagacactgccctgatatgaaatatgtgtctgata
tgaaacgggaacacttatgtaaaaataaaagctTTAAACATCTCAAAGTG
TGTGCTAAGCCTAGCTTTTTCGCTGGATTGAATGGATGAACACATACAAC
ACATGTTTTACATTTCTATACTGTGAAGTTGTACACCCAGGGTCACATGG
TCAtgaatcataaaaaagcgaaagggactgggttcgagtttgtatttttg
tagaGATGGCTTAATCGTATCCTTAGGCTGCTGGCAACCACTAAAGGGTT
CGTTCTCCTATTGTTCCTGTGGTTTTTGAAAGGTCTGCGGTTCGGACTTT
GTGGTCATTAGCCTTTGTTTCTTACTCCGTATTTAAGCATAGGgaatttg
aggctgaaaatggtgcCAAAAATAAGGAATTCTTTATCGAGTTTTTATCT
TCATTGCAAATCAGCTAATTGCTTAGgatgctggcatccactaacggatt
cgtgctcctatGTTAcatgcggttttgtagaggtctgcgattcagactac
taATTGCTTGCTGTTATCTTTTCAACTGATGTTTGCAAAATTGATTCAAG
TTAGATTAGTTAAATTGAGTCGAGACGAAATGTACGTGCCTTATACCTCA
TCTTATCATGTCTATTTTAACTGTGTAAAAGTCTGGTGATCAGTTCAGAT
GACCTCTGTCTATCCTAGAGAATGGCGgacgagtttatgtatgtgtgtgt
tTTTTTTGCGGCTGGGAcgtttgattttgatttgtCTATACCCTGAACAA
CTGAGGACGACTGCAAATcaacacttttaccgtcctcaattttTCGGGCC
AGGACTACTGGTTATTCAAAGTCGCGTTATTCTAACCTgggatcagattg
tgaatgctttctgcacaccacgctgaagctctaaagggatgtgtgaatac
ataacaatctgacgaatatgcaatctcgaaatcgtaaggaccgcgttcgt
ctaaaaggactaggaacgacaacaaagttgcgtgattgtgtttatgaata
gggcgccgtatcagtttttgactttccggcaCACAACAAGATTTTTgatg
tagaattttccgcggaaGGACTGTTTTCCTTAGATGTATAATTTCCAAGC
GCCTTCAGAAAAAAGTTcgtaagaaaattacgaacagCTGCGTTATCAGG
TTACGTTGTTCCAAGTCGCTTCAGTTACTCAACTTTCCTCAAAttacaaa
tacataaactcgctaatgtatGTGATGATGGAAGTTTGCACTTTCCTTCT
ACTATTTGTTCACAGATggtatttttagcaaaaaaaatgatatttgcAGA
AAATCCGGATAATGCAACAACTTTCTTGgtaaaacggcaataattgttTC
AATAGACTGTTCCAGGGGATTAATCAAATTTAATGATCTTTTTCTGTCCA
GATTGTCTTTTCAATGTTTGCAATACTCAGATGATTATCTATAcctcaat
tcatgatattcatgacgtaatgttttctacggaaagaccccggttttcgc
cagtagtggcaaattttatacaacttttgtctagtttaaatttgccacta
ctggcaaaaaccggggtctttccgtagaaaacatggATATCATGAATACA
AATTTAGTGTTCGACGTTGATATTGTTGGATTATTTATGAGACtcggttg
ttcttattttctttggAACTTTGAGCCTCTAGTTATTCTTATCTTGTTCT
TGTTTGCAAGACCAAATTGAGGTAGTTTAGTTTAAATTCTCTATTCAGCT
ACTCCAGTGTCATTATGGGTCTTACAAAATGATTCGTATTAAAAAATAGT
AATATTTGGACTTTGGACGTTTATGTAAGTGTTTAGTTGTTTGTTTAAAG
TATATGCCTCGATGCAGTGTATGTAGGAAAGAAGAGAGCGAACTTCTTTT
TGAATGACCCAGTTGTTGACATCAATGTAATCAATGGATTAAAATTTCAT
AATCGAAATTAATTGAGNATGAAAGATGAGAGCGAACTTCTTTTTGAATG
ACCCAGTTGTTGACATCTCGTAATGAATGGATTAAAGTTTCATAATGGAA
ATTAATTGAGTTTTATTTTGTATATAGAAATATACGTCTGTTATCATTCT
CAGTTTTATAGTTCCCATTCGATGTTGATTTTTATCGATTGCTAGTCAGA
TGAAATAAGGTGAGTTTTAAGGCCCTGACTGGAGACGAATCTTCAAACCt
tttcaagcaagaaaaagtgagcGCCTTAATATTTGCAGCGCCTTTAGGat
gatggattgaatctagcccTTTGTTTTGGTgtgacatatttttcaaaatc
tgtgaATAGAACATTTATACTTTTGTGTGGTGGTGTGGTGtggttttttt
gttttagatagGAAAtgagtggcttcatttcccattcaGGAGTTTCAAGC
CCCTATGGCATCCTTGGCGTTTGAATAACTTCATTCAAAGCTGTGTTCAA
TTCTGGAGGGTAATGGAAGAGTAGTTTTTAGGTTTCAGGCGACATGTTTT
TGAGGTCACAAGTCATTTTGATGAATGCTTTTTTCACTCCGCCTGTTTTA
AATACAGAATACAAGGTCAGCCCTTCTGATTAAAACTTTTCTAtttgtga
taaaaaaaatttgcacaCATTAAAGCTTTCTTAGTCTTTCTAATCTTGGG
ATTTGTAGTCATAATTAACTGGGTTTTAAGTCGCCtcattttttctctct
tttgtgTAGAAAAACTCGATTAATCTGAAGCCCTCCCAGCGTTTGTCTTG
CTAATCCAACTTGTATAAACATTAAGATAGATGGATTAATCCGAATGAAG
CTTTTTATGAGTTTTTAAGACATTCTGTTTGTAGTTTACGCCGTGGTATG
TTTTGAGGAATTGTCAAATAAGGTTTACTTGTGTTTTAAGATATGTTAAG
CGCTGTATTGCACTCTTTTACTGTAAGTGGTTAGCAAATGTTTCTGTGAT
CATAATTTTCACTCAATTTTGTAGTTTTACGTTTTCACAAAGGAGAAATT
TACGGTTTTTTCCTTCCGCAACTTTTCTCTGGGGGTGTTTGGAAAATGGA
AGTTTTATCGATTTTTGCTTCCCTTGTATAGCCGCTGTTTTCAAATAAAT
GGTTCTCGAAGGTTCTCAGTAGGAGTATCATAGGTTTTGAATGGAGTCTT
TTTCAGCAAGCTCCCTCTCATGTCGAGAATGAACAGTCAGGAAATTGTTG
ACCTTTTTGCTCCAAGGAGATTGATATATTTGTGAGATAGCGGGAACGAT
TTTTTAAGTTGTATTTGAAGAGTTGTTTTTGTGAGATAGGAAATAAACGA
TTGAAATGTTTTTCCATTTGTTTCCTCGAGAGTGGGCTTTAATAAGAGTT
CTCGTGGAGCTTATCGACCTTGATAAACCCTACGTTGTACATAGGTTGAT
TATGTTATATCTTGTAAAACTTTTGACCCCCCATTCCCTAGAAGAAAAAT
ACACTTTAAATTGGTTGTCTCCGAGTGAATGGCAATCTCATTAACTGAAG
CGTTAAAATATTCAACgtttaaaaaatgaagttttgtttttgttttggtg
aAATTTGAGAAGAAGAAGGAGGAGACTTTGTGACACAGAAGAATATTTTA
ATCAGCaggatttctgaaaaatattatttggtTTCAAATTTTACTTCTCG
TTTATCTTTTCCGTTCCTGAGAGTTCTTTTCGGCTATTTTCCACTGATTT
CCACCAATTGGCTTCTTTCTATCTGTAGCATTACGAAATTTCcgtatttt
tggacctaccccggtggtgtggaggtcctataaattaacccgtgttcgtt
agttagttagttaccaacttttctcgagattggctcattcaatttttctg
attttttgcacaaaggtgcattaNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nagatatataaatcgaaatttaaaattatacattacttccattaaattct
aattattcgttttataaataggtaggtccattaaagtattacttgtttat
TGGTATATCTAATTTTCCTGGATTGATACAGTTCGCCTTGGAAGGTTCTG
TTATATAGTGGATGAGGGTCATTGACCTTTCTGGCTGCACAGGTGACTGA
GGTTTGATCCCCACTCGCAGCGTTTCAACGagccttcgcccgggtcaacc
catgccatgtgaggggaattgggtagtcagtccaagctGATGACAGGGCG
CTAATTGAATGCGTCTATAGTTACGAAATGGATCTTAGATCCTTCTGCAA
CTTAACCAGgtagaaatagaaaataaattaaaaattattacTTCCAGTTT
TTGAAATGCTCTCGATTTAAGGAGAAATAATTATATGCTATCTATCAAAA
ATTTATTGCACAACTCAGTCTGAAGTTATTGCAAGATAAAGATCTGGAAG
TCTTATGAACTTTTAAAGGGAACTGTTTTGAAGGAAGGAAGAGGTAGATT
AGACGTCTAATGTTGAAGTTGGAAAGTAAGCTTTGTTTGTAATCGAAATT
ATCTGATAAAAAAGTCTTTGCTAAGATATATTTTGGGAGTTCTATTTCTT
GTTGTTCTTTCCGAAGATAAAGTTTAGACAGTTCTATTTCTTGTTACTCT
TTTATCAAATGAGTTCAAAGACGACAGAAAatagaagtttttcttttttt
taagacAACCAGACATATTATAACAGGATGATGTACTCACAAAATGGATG
GAAAAgccgtaatttttttaaatttaggaAAACCCTTTCGGAGTCTTCTA
GACAGTTCAAACTGACagatgtttttgaagaaaaattcaaaaattcaaag
ctAAAAAATTCGATGTCAAACGAAAAACTTATAGTGCTAGATAGGGTGCT
AGATAATCAGGTTTGTATTTGGTCCAGTTAGGGAGGTTTGTTTTGGTAAC
AGCACATCCAGACTTGGTAATTATACTCGGCTTTTCGTAACCACTTTCCA
CTTAGAGTGTAGTGTAGGGGTGACCACTTAGGGGGCGTACCAGTTTGTTG
GTGTGTCggtattgacctttttttgcgtcggtatttcggtgatcaacaaa
aaatgtgttggtattttggtgtttgagatgcttttcggtgacggaaaGTG
TTAAATTTCAAATCGCTGATACGTTGATTTTGCTTAAAAGGTCGGAGAAA
CGGTGCTAAATTAAGGGCTATGTCTTAGAAATCCCTCTTGCCATTCAACT
TTCGTCGACAGCTTGAAAAAATTCGGTGTCGGTATTGCGGTGATTTTGTG
AAAaactgtcggtatttcggtgtccagAACCCTCGTACGCCCCCACCACT
CGAGGCTGATACTGGTATCCACTAACTGGTTTGAGCTCCTTATATACTAC
CTGAGGtgttgtagaggtctgcgattcaggcTAGGTTGACACAGGGTGAA
AAAACTTGATTTTATATTATCGTCAATACCTATTTAATTCAGGTAGGTCG
TATAAAagtcttcaaattaaaattactttgaattactttactcttttttt
tagaaaaacaaaaaccaaataCAGGATGTCCATCGCCGACACACAAACAG
TACTCATTTTTATCTTAGTGAGTGTGTTCACGCATCCTTCACTGACAATT
GAGCAAGGGAAGTGTGACCAGACATGTCAGCCTGGTTCGTTTAAAGTCAA
TATCACTGGTAACACCAACTGTACGTCAATATGTAAACCATGTCCTAAGG
ATTCGATCACTAACGATACAGACCTCACATCTTGTATGAAGTGCCAACCT
AAAGAGGTATCTAATCCGGCACGTACAAAATGTCAAGTCTATGGTATTTC
CGTATACTCGCTCGCCCGTCCGGCTGGTATTCTGACCTTGATTTGTCTTT
CCGTAATGGCGTTCGTTCTGCTCATGGCTTTTATCGTGTTGGTCAAGAAT
AAGAATCATCAACTCGTCCTAATGTGTGGCTACCATGGCTTGATCTTGTT
CCTGATTGGCTGCGCTATCGTTCTACTCTCCTCAGTCCCCTTGCTGGCGA
AACCCAGCGTCGGAGGGTGTTCCGTTTTTATCGGGTTATTCAGTATCGGT
TTAACCATCATTTTCGCGGTCTTGATTTCGAGGAGTGGATTTGCGAACAG
TTTTTACGACGAGAATAACGAGATTGTTAAACGTGGTTGCGGGCAACGAC
CTCGACTTCATCTCATTCTCCTGGTTGTTTCCATACAGCTCCTGTTTTTG
ATCATCGGATTATCTGCTATGAAACCGGAAACGATGGAACTGGCAACGGA
AACCTGGCACATCCGGTACTTAGAATGTTCAAATTGGGCCAGTCTTGTAT
TTTGGGTGGCGTTCGCTTATAATGTTGTTTTAAGCTTGGTGGGAAACTTC
TTGTCGTGTAGCTCCACTGATATGGATGAAAGATGCCAAGAATTACGTCA
TGTTTTGCTGTCGTATCTTATGTTTTACGTCATGGCGTTACTTCACATCA
TTCTTCTCTTCCGTGTGGTAAATGAACAACTTGCGGAGGGACAAGCCATA
TTATGCGTGTTGTATACCCTAGGGTTTTTCTTGTGTTATATTGCACcgaa
aatttatattattatgTATTATACAAAGGAAGATGGCGTCACTATTCAAC
CTGAAAGACTTTTACATGATCATGAACATCAAGAAAGTCATGGGACGTCA
CTCATTCACGCTAAAGATGGGTACAAACATCATATTGTTGGAATGAAAGT
CAAATCCGTCGCTTAAGTGTTGTTCGACATTGTTGTGGACGAAAGGAGAA
TATTTTGGGATTCCCTCGCCACTTTATGCCATGTTGAAAGTATTTATGTT
AAATTACGTTACAATGGATTTTGTGATACTCACGTGTTAACATTGTTGTG
GATGAAAGGCGAAAATATTATTGGGCTATCTCTGTTGTCTCGCTGAaatg
agaaaactttttttttggtatctCGCTGATTCAACAGATCCCTGCTCATG
GACTCGCTAATAGTGAATTGAAGTGGACATGAAATTAGAATTTTCATAGA
ACCGCCTCGTCGACAGCTTGAACtataaatttatgaaatttcacCATGAA
AAGAACCAAACTTTTAGTTTAAATAAAACACATCTGtttcagaaatcttg
aaaactgCTGCTCAAAAATCTGTCAGAGAGACAACAATTTGCAACTgact
ttcattgaatttaaacaaCTTTTTGCCGTATAGTTTTTGCACCTTCTTTA
TCAAAATGGGAAaagtcactgaaacagggttgttAAAGGTCTTAGCAGGC
TACTTTTAAGAGAGCGACAGTGCTGAACTGTTAGGGTTTGAAAAAGCTAG
CGATAGAAATTTCTTTATGGTTAATGTATCATAACTTAGGAATGTATATT
TTCTcgatttgtaatttttaatgtttgtaatatttccttttggCCAATGA
ATTTTTCGTATAGTAAAAGTTATCTTCCccttaaaatgtaattttaataa
ttgaaatttaatcaaaaaatGTTTACTTGACTGAACGACCCTTTTGTTCA
GATatctaaaaaaa Coding sequence (CDS) from alignment at scaffold_105:556954..569567+ >TCONS_00046005 ID=TCONS_00046005|Name=TCONS_00046005|organism=Clytia hemisphaerica|type=CDS|length=2478bp|location=Sequence derived from alignment at scaffold_105:556954..569567+ (Clytia hemisphaerica)
TCGGTTGATTCAAGAAAGCTGATAAGaaaaacaaaaaccaaataCAGGAT
GTCCATCGCCGACACACAAACAGTACTCATTTTTATCTTAGTGAGTGTGT
TCACGCATCCTTCACTGACAATTGAGCAAGGGAAGTGTGACCAGACATGT
CAGCCTGGTTCGTTTAAAGTCAATATCACTGGTAACACCAACTGTACGTC
AATATGTAAACCATGTCCTAAGGATTCGATCACTAACGATACAGACCTCA
CATCTTGTATGAAGTGCCAACCTAAAGAGGTATCTAATCCGGCACGTACA
AAATGTCAAGTCTATGGTATTTCCGTATACTCGCTCGCCCGTCCGGCTGG
TATTCTGACCTTGATTTGTCTTTCCGTAATGGCGTTCGTTCTGCTCATGG
CTTTTATCGTGTTGGTCAAGAATAAGAATCATCAACTCGTCCTAATGTGT
GGCTACCATGGCTTGATCTTGTTCCTGATTGGCTGCGCTATCGTTCTACT
CTCCTCAGTCCCCTTGCTGGCGAAACCCAGCGTCGGAGGGTGTTCCGTTT
TTATCGGGTTATTCAGTATCGGTTTAACCATCATTTTCGCGGTCTTGATT
TCGAGGAGTGGATTTGCGAACAGTTTTTACGACGAGAATAACGAGATTGT
TAAACGTGGTTGCGGGCAACGACCTCGACTTCATCTCATTCTCCTGGTTG
TTTCCATACAGCTCCTGTTTTTGATCATCGGATTATCTGCTATGAAACCG
GAAACGATGGAACTGGCAACGGAAACCTGGCACATCCGGTACTTAGAATG
TTCAAATTGGGCCAGTCTTGTATTTTGGGTGGCGTTCGCTTATAATGTTG
TTTTAAGCTTGGTGGGAAACTTCTTGTCGTGTAGCTCCACTGATATGGAT
GAAAGATGCCAAGAATTACGTCATGTTTTGCTGTCGTATCTTATGTTTTA
CGTCATGGCGTTACTTCACATCATTCTTCTCTTCCGTGTGGTAAATGAAC
AACTTGCGGAGGGACAAGCCATATTATGCGTGTTGTATACCCTAGGGTTT
TTCTTGTGTTATATTGCACcgaaaatttatattattatgTATTATACAAA
GGAAGATGGCGTCACTATTCAACCTGAAAGACTTTTACATGATCATGAAC
ATCAAGAAAGTCATGGGACGTCACTCATTCACGCTAAAGATGGGTACAAA
CATCATATTGTTGGAATGAAAGTCAAATCCGTCGCTTAATCGGTTGATTC
AAGAAAGCTGATAAGaaaaacaaaaaccaaataCAGGATGTCCATCGCCG
ACACACAAACAGTACTCATTTTTATCTTAGTGAGTGTGTTCACGCATCCT
TCACTGACAATTGAGCAAGGGAAGTGTGACCAGACATGTCAGCCTGGTTC
GTTTAAAGTCAATATCACTGGTAACACCAACTGTACGTCAATATGTAAAC
CATGTCCTAAGGATTCGATCACTAACGATACAGACCTCACATCTTGTATG
AAGTGCCAACCTAAAGAGGTATCTAATCCGGCACGTACAAAATGTCAAGT
CTATGGTATTTCCGTATACTCGCTCGCCCGTCCGGCTGGTATTCTGACCT
TGATTTGTCTTTCCGTAATGGCGTTCGTTCTGCTCATGGCTTTTATCGTG
TTGGTCAAGAATAAGAATCATCAACTCGTCCTAATGTGTGGCTACCATGG
CTTGATCTTGTTCCTGATTGGCTGCGCTATCGTTCTACTCTCCTCAGTCC
CCTTGCTGGCGAAACCCAGCGTCGGAGGGTGTTCCGTTTTTATCGGGTTA
TTCAGTATCGGTTTAACCATCATTTTCGCGGTCTTGATTTCGAGGAGTGG
ATTTGCGAACAGTTTTTACGACGAGAATAACGAGATTGTTAAACGTGGTT
GCGGGCAACGACCTCGACTTCATCTCATTCTCCTGGTTGTTTCCATACAG
CTCCTGTTTTTGATCATCGGATTATCTGCTATGAAACCGGAAACGATGGA
ACTGGCAACGGAAACCTGGCACATCCGGTACTTAGAATGTTCAAATTGGG
CCAGTCTTGTATTTTGGGTGGCGTTCGCTTATAATGTTGTTTTAAGCTTG
GTGGGAAACTTCTTGTCGTGTAGCTCCACTGATATGGATGAAAGATGCCA
AGAATTACGTCATGTTTTGCTGTCGTATCTTATGTTTTACGTCATGGCGT
TACTTCACATCATTCTTCTCTTCCGTGTGGTAAATGAACAACTTGCGGAG
GGACAAGCCATATTATGCGTGTTGTATACCCTAGGGTTTTTCTTGTGTTA
TATTGCACcgaaaatttatattattatgTATTATACAAAGGAAGATGGCG
TCACTATTCAACCTGAAAGACTTTTACATGATCATGAACATCAAGAAAGT
CATGGGACGTCACTCATTCACGCTAAAGATGGGTACAAACATCATATTGT
TGGAATGAAAGTCAAATCCGTCGCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046005-exon-scaffold_105-1491911889:556954..556981 | TCONS_00046005-exon-scaffold_105-1491911889:556954..556981 | Clytia hemisphaerica | exon |
| TCONS_00046005-exon-scaffold_105-1510915933:556954..556981 | TCONS_00046005-exon-scaffold_105-1510915933:556954..556981 | Clytia hemisphaerica | exon |
| TCONS_00046005-exon-scaffold_105-1575043694:556954..556981 | TCONS_00046005-exon-scaffold_105-1575043694:556954..556981 | Clytia hemisphaerica | exon |
| TCONS_00046005-exon-scaffold_105-1491911889:567557..569567 | TCONS_00046005-exon-scaffold_105-1491911889:567557..569567 | Clytia hemisphaerica | exon |
| TCONS_00046005-exon-scaffold_105-1510915933:567557..569567 | TCONS_00046005-exon-scaffold_105-1510915933:567557..569567 | Clytia hemisphaerica | exon |
| TCONS_00046005-exon-scaffold_105-1575043694:567557..569567 | TCONS_00046005-exon-scaffold_105-1575043694:567557..569567 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_105 | supercontig | scaffold_105:556954..569567 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR017978 | GPCR_3_C |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
|
