TCONS_00046015 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046015
Unique NameTCONS_00046015
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3085

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046015 ID=TCONS_00046015|Name=TCONS_00046015|organism=Clytia hemisphaerica|type=transcript|length=3085bp
GCATTTTACATTTTACGAGTTCTGACGCGGTAAAGTTTACTTCCAATCTa
gcgtttgtatgaaaaccacgcGTGGGCTGTGCAGCTTATATATAGAATAA
GATATGACTTCAAATCCTACAAAGGAGATTCGACTATACCTTTCGGCTAC
ATCTCATTGGGGAAATCAGTATCATACATTAGTGAGGCACAAAACTAATG
AGTTTCAAAAGTTCCCTCCCTCTGACAACCCAGCTatcacataacgttgt
ttcaacgtttttctaacgttcacaacgtccatataacgttatatgaacgt
taaaacaacgttgtgtgccagctgggaatgcAAAACATATAAACTATAAT
CCTCACCTGAAGTCTTCACCTTTTGGCCGAAAAAAGTCTTTGTGAAAGTG
agcaaattttcagtttgaatttaTATTATAAATGATAAAGAAAACCAATA
GAGATGAAAGATCAACGAagcatcaaaatgaaaaatcataaataaaattt
CGCACATTTTGACTTCCTCTTAGTACAGTTTATAACTACCAACTAacatt
tgcaatattttttgataaacagcGTCTAGACAAAAAggaagtttaatttt
ttcagaaattgatttCTTGAAGGCATACCGAAATCCTGAAAATTCTTTTA
ACCGCCCCCAATGGATAAATGACCCTCTATAATACTTCTAACAGtgacaa
aattaaataaatGCCCCAGGCAATTCAGAGTATAATACTATAATCCTCAA
ATTGTTAATTCCAGGCTGAGGGTTTTTTGTCGTTTAAGAGCCTCGtcatt
cttatagaaaaaaacgaattaaaggTCATCAAGATTTTTTAGGGATTAAT
TAGGAAAAATTCCaatggcaaaaaaaaaagagaaagaaagaagaaagtgT
TTCAAGGTTCATCGCCTATCATGTTTATATTGATTGAATTTTGTCtaaaa
agaatttaaagtttCCTGTTACTCAGATGTGGTGATGCGTTTGATTATAA
CTTCTGTCCATTGAACCAAGCATAACAGAATTTGCTGCACTGAAACTTTT
ATGAACTTCTATCTAGTTTCTTCAAATAATTTATTTGGTTTTTCGTCAAA
CACGTTGAAAGACCTCACTCACATCGTGTTCGACATTTCAAAGGTGATAA
AAGCTGTTGGTAGGATgaagtttttaatatttgcctTTTTGCTGTTTTGG
AGTTTGCATCACTATGTAGAAGGAGGCGGTATGGCGGAGCTGGTAATCAC
TGCATTGACCGGATGGGCGGAGATGGGGCCTGGGGAGAGTGATGGTGGGG
AAGGACAAGAAATCgataaagaaatgaaagaagCACAAGGAATTTGTGCC
TTATTGGAAGGTTGCAAAACGTCAGCaatgggaaaatgtttttcggGAGA
TGATCAATCATGTTCCAAATGTTATTACGATAGTGAAACGGTTAATACAA
GGAATATCATGCGTGCTGACTTTTACGACTTTGATGAAGCACAACTGCGA
CAATGCTTCGATGCTGAACAGAATTGTTATACAGGCCGCACCCCAGAGTA
CCACGCGGATGTGTCACAAGTCGTGGAGGAGATGTTAGATTTCATGCTTT
TAAAGGGAACCAGTGTGGCCGAACGATATCAAGGagctgtttttaaaaat
gtgaaCGTTCCGCACTTTCAAAACCTTAAGACATTATACGAGACGAAGTT
TTGTGGAGAAGGGTGCGTTGCTGAGCTATATGAGGGTTGTTCGGAGTATG
TCAATATGCGGGAAGTGAAAGATTGGTGTTTGACAGTCTTCGACTGGGTA
TCAAAAGACATCCCGAATCTGAAAGGACCACCATCATATATTTTGATGTT
GGTTGGCAAATTGAGCGAAAAGCTAAGAGGTACTTCCAATGAGTTCTCAA
CGCCATCAGAGCTCACCTGCACTGGCAGTGAAGGCTGTTGGCACAATTTT
GTACCCAGGTGGGTTATAACCACAATTCGAGACGGACAAGATGGCGCCCT
TGTGGCGGCCGCCCTCACTTCCGCCATGCTGACCGCTGATTGGTTCCCAA
AGATCACTAAACATGGTGGATTTGATTCTGATTTTGGATTCGCTGTTCAA
CATTCTCTTTGGCTTGCCATCTACGCTGGTCGGTTGGGCATATCTTTGAA
GTGTAAAACCACTCTGCAAGGGACCGAACCGGTTGATTACGGAACCtcaa
tcctttgcaatagagggGAAGCAGAAAATCATGAGTTGGGAACAGGTTCG
GTTTTTGCTTCACTATGCACCCTTTTCACCGGCGCTCGACACAATATCGA
TTTGAAGTTCCGACCGGAAATCATGTCTCGACATTCGATGGGATGTACGG
AAAAAACGACCGGGATGGCCTTCATACGGCCCGGAGATTGGGTCAATACA
CACTACAGGACAAAGTCTAAACGTTTGGAAAATAGAGACCCGAACGCAGT
GTGTGTTGGCGGAGGATCCATGAAGTATGGGTTAGCGTTCATTGACCGAC
GCAAGCTCACCACCGTAGAGATCACAAAACGAGGAGTTACTTTGTATCCG
CCTTCCATAGGAGAAAGTCTTCGAAATACAGTGCGTCCTACGTGTGGACA
CATTCAGTCATTCACGAAGAGGGTGCCATTCGAAGAATGTGGCTTACGTG
GCTATGGTAGTGTGTGCAAATGGAAGCCAGTGTGGTGAAGAGATATTATG
ACAGAAACTGTTGCAAATGTTCTAGTTTTATTTGAATAGtataaaaaact
ttgaaaatactGTAAGCGTATCTCTTGAAATCACAAAATGTAGGTTAGAG
ATTGTACACTCAAACTTTATCAGGAAAATAATCAGGGGCGAGTGACTGAA
TATCTGaggaaatttgatcaaaatcttttcaacaaacacCTGTcaacaaa
tcaataattttgGAGGGCTGTGCAGCGAAAAggaccaattttttttaaat
ttagtttgATTATCAAAATAAAGGTTATTCATACACACATGAGCCCCTGT
CTCCTATTGGAAACATTGCCAAGTATATCTTCCATAAAAGCCCCAATCAA
TCTACCAAAGAGAGAATCTCCAAGAAACGACGTTG
Run BLAST on NCBI

protein sequence of TCONS_00046015-protein

>TCONS_00046015-protein ID=TCONS_00046015-protein|Name=TCONS_00046015-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MNFYLVSSNNLFGFSSNTLKDLTHIVFDISKVIKAVGRMKFLIFAFLLFW
SLHHYVEGGGMAELVITALTGWAEMGPGESDGGEGQEIDKEMKEAQGICA
LLEGCKTSAMGKCFSGDDQSCSKCYYDSETVNTRNIMRADFYDFDEAQLR
QCFDAEQNCYTGRTPEYHADVSQVVEEMLDFMLLKGTSVAERYQGAVFKN
VNVPHFQNLKTLYETKFCGEGCVAELYEGCSEYVNMREVKDWCLTVFDWV
SKDIPNLKGPPSYILMLVGKLSEKLRGTSNEFSTPSELTCTGSEGCWHNF
VPRWVITTIRDGQDGALVAAALTSAMLTADWFPKITKHGGFDSDFGFAVQ
HSLWLAIYAGRLGISLKCKTTLQGTEPVDYGTSILCNRGEAENHELGTGS
VFASLCTLFTGARHNIDLKFRPEIMSRHSMGCTEKTTGMAFIRPGDWVNT
HYRTKSKRLENRDPNAVCVGGGSMKYGLAFIDRRKLTTVEITKRGVTLYP
PSIGESLRNTVRPTCGHIQSFTKRVPFEECGLRGYGSVCKWKPVW
Run BLAST on NCBI

transcript from alignment at scaffold_105:686459..691036+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046015 ID=TCONS_00046015|Name=TCONS_00046015|organism=Clytia hemisphaerica|type=transcript|length=4578bp|location=Sequence derived from alignment at scaffold_105:686459..691036+ (Clytia hemisphaerica)
GCATTTTACATTTTACGAGTTCTGACGCGGTAAAGTTTACTTCCAATCTa gcgtttgtatgaaaaccacgcGTGGGCTGTGCAGCTTATATATAGAATAA GATATGACTTCAAATCCTACAAAGGAGATTCGACTATACCTTTCGGCTAC ATCTCATTGGGGAAATCAGTATCATACATTAGTGAGGCACAAAACTAATG AGTTTCAAAAGTTCCCTCCCTCTGACAACCCAGCTatcacataacgttgt ttcaacgtttttctaacgttcacaacgtccatataacgttatatgaacgt taaaacaacgttgtgtgccagctgggaatgcAAAACATATAAACTATAAT CCTCACCTGAAGTCTTCACCTTTTGGCCGAAAAAAGTCTTTGTGAAAGTG agcaaattttcagtttgaatttaTATTATAAATGATAAAGAAAACCAATA GAGATGAAAGATCAACGAagcatcaaaatgaaaaatcataaataaaattt CGCACATTTTGACTTCCTCTTAGTACAGTTTATAACTACCAACTAacatt tgcaatattttttgataaacagcGTCTAGACAAAAAggaagtttaatttt ttcagaaattgatttCTTGAAGGCATACCGAAATCCTGAAAATTCTTTTA ACCGCCCCCAATGGATAAATGACCCTCTATAATACTTCTAACAGtgacaa aattaaataaatGCCCCAGGCAATTCAGAGTATAATACTATAATCCTCAA ATTGTTAATTCCAGGCTGAGGGTTTTTTGTCGTTTAAGAGCCTCGtcatt cttatagaaaaaaacgaattaaaggTCATCAAGATTTTTTAGGGATTAAT TAGGAAAAATTCCaatggcaaaaaaaaaagagaaagaaagaagaaagtgT TTCAAGGTTCATCGCCTATCATGTTTATATTGATTGAATTTTGTCtaaaa agaatttaaagtttCCTGTTACTCAGATGTGGTGATGCGTTTGATTATAA CTTCTGTCCATTGAACCAAGCATAACAGAATTTGCTGCACTGAAACTTTT ATGAACTTCTATCTAGTTTCTTCAAATAATTTATTTGGTTTTTCGTCAAA CACGTTGAAAGACCTCACTCACATCGTGTTCGACATTTCAAAGGTGAGGA TTTGCCAATttcttgatttcaaatttttctaaatttgttcTGGTCTTGCT CaacaataaaatcaactcaTCAATGGTAGGCTACGTCATGTTTTCCTTTT TCCGTTTACATCGCACGCGCACTAACGTTTTagtgaaacaatagagagtt tcgaaacctaagccaatcagctgtgttttaaacattcttttatttgtaTT GCCTATTGATAAAcctcttttgttaaaaaaattctattaataagcgaatt cccggtgggggtcactagtggctgCCTATAGGAGTGCCTCTAGACCAAGA TTCTAGGCCTTAAAGCATGGAACTGTCTATTATGTAGACTAACCAATGTT AGCTCTTTTTTCCTTTCATTTACAATTGTAATTGTTCCTGATATCCGGCG TTAAAAATTCGTCCCAGGCCTCaacagtcaatttttttttcagaaattag gAAAAGAGATAATAAGCTGCTGCTTATATTAAATTTCTTGttcaacccag ctggcacacaacgtcgtttcaacgttcatctaacgttcacaacgtccata taacgttagatgaacgttgtagcaacgttgtgtgccagctgggaagcaTT TGGAACATACGGTCACGGTTAATCGAGTCAAAAGCTTTGACAGCCTCTTT TTTGTGGTTTCTAATTCTAAGCTCTTCCANAACCGAAAGAACAagttttg caaaattaaagttctTGCCTGCCCTACACCCAaaattttcagataatttt ttaacaatttttcgtTTCAGGTGATAAAAGCTGTTGGTAGGATgaagttt ttaatatttgcctTTTTGCTGTTTTGGAGTTTGCATCACTATGTAGAAGG AGGCGGTATGGCGGAGCTGGTAATCACTGCATTGACCGGATGGGCGGAGA TGGGGCCTGGGGAGAGTGATGGTGGGGAAGGACAAGAAATCgataaagaa atgaaagaagCACAAGGAATTTGTGCCTTATTGGAAGGTTGCAAAACGTC AGCaatgggaaaatgtttttcggGAGATGATCAATCATGTTCCAAATGTT ATTACGATAGTGAAACGGTTAATACAAGGAATATCATGCGTGCTGACTTT TACGACTTTGATGAAGCACAACTGCGACAATGCTTCGATGCTGAACAGAA TTGTTATACAGGCCGCACCCCAGAGTACCACGCGGATGTGTCACAAGTCG TGGAGGAGATGTTAGATTTCATGCTTTTAAAGGGAACCAGTGTGGCCGAA CGATATCAAGGagctgtttttaaaaatgtgaaCGTTCCGCACTTTCAAAA CCTTAAGACATTATACGAGACGAAGTTTTGTGGAGAAGGGTGCGTTGCTG AGCTATATGAGGGTTGTTCGGAGTATGTCAATATGCGGGAAGTGAAAGAT TGGTGTTTGACAGTCTTCGACTGGGTATCAAAAGACATCCCGAATCTGAA AGGACCACCATCATATATTTTGATGTTGGTTGGCAAATTGAGCGAAAAGC TAAGAGGTACTTCCAATGAGTTCTCAACGCCATCAGAGCTCACCTGCACT GGCAGTGAAGGCTGTTGGCACAATTTTGTACCCAGGTGGGTTATAACCAC AATTCGAGACGGACAAGATGGCGCCCTTGTGGCGGCCGCCCTCACTTCCG CCATGCTGACCGCTGATTGGTTCCCAAAGATCACTAAACATGGTGGATTT GATTCTGATTTTGGATTCGCTGTTCAACATTCTCTTTGGCTTGCCATCTA CGCTGGTCGGTTGGGCATATCTTTGAAGTGTAAAACCACTCTGCAAGGGA CCGAACCGGTTGATTACGGAACCtcaatcctttgcaatagagggGAAGCA GAAAATCATGAGTTGGGAACAGGTTCGGTTTTTGCTTCACTATGCACCCT TTTCACCGGCGCTCGACACAATATCGATTTGAAGTTCCGACCGGAAATCA TGTCTCGACATTCGATGGGATGTACGGAAAAAACGACCGGGATGGCCTTC ATACGGCCCGGAGATTGGGTCAATACACACTACAGGACAAAGTCTAAACG TTTGGAAAATAGAGACCCGAACGCAGTGTGTGTTGGCGGAGGATCCATGA AGTATGGGTTAGCGTTCATTGACCGACGCAAGCTCACCACCGTAGAGGTA GGGATTCTTGTGAATACATTTCAGTGATTGATAATGacatattttcagct ttttaaaatttttctgagacTTAAATATCTGTGAAATGAGtttccttcaa aaaagaaatcctTTCTCTGACTCCGAAAGAGTGTAATAGTAATTACccag tcatttgatttgagatgGCTCTCTTTCTTTGAATCTTTTATACGTTTCTT ATTCGTGATTTGATTGGTACGGCTTTCGTCCAAGATCCTGGATGATTGCC ATGGTTACTTTAGTTCTCGTTGAGTAGAATCCTTATTTTTCGTCACAGTG TAAGATTCATACATTGTGATActcgggatgagctggagtttttataagat acttcactaattggtcatttgaaataatagagatgacgcgttctttagaa aaagcaataaaatcctttgtctcaagATTCAACGACCAACCGAATCATCG AAAACCTTTTGACCCTGATACTCACGGTATAACTTCTTTGCGAAAACATT AAAATCTCGCCAAAATAAACCCTCTTAAAATAGAACCATTTCTTCCAAGG ATTATGTCAATTTCCCTATCGGAAATACCCCagcaaaatattatgtttta gtgaaaaatccGGGTGTCTGCCCCCTCCCCGAAGGGGTGCTCTTAATgga aaaaatgacgtaatcttaatCTATTATGAATCAATGTTGAAATTGAAATC TCTTTTGATTTAGATCACAAAACGAGGAGTTACTTTGTATCCGCCTTCCA TAGGAGAAAGTCTTCGAAATACAGTGCGTCCTACGTGTGGACACATTCAG TCATTCACGAAGAGGGTGCCATTCGAAGAATGTGGCTTACGTGGCTATGG TAGTGTGTGCAAATGGAAGCCAGTGTGGTGAAGAGATATTATGACAGAAA CTGTTGCAAATGTTCTAGTTTTATTTGAATAGtataaaaaactttgaaaa tactGTAAGCGTATCTCTTGAAATCACAAAATGTAGGTTAGAGATTGTAC ACTCAAACTTTATCAGGAAAATAATCAGGGGCGAGTGACTGAATATCTGa ggaaatttgatcaaaatcttttcaacaaacacCTGTcaacaaatcaataa ttttgGAGGGCTGTGCAGCGAAAAggaccaattttttttaaatttagttt gATTATCAAAATAAAGGTTATTCATACACACATGAGCCCCTGTCTCCTAT TGGAAACATTGCCAAGTATATCTTCCATAAAAGCCCCAATCAATCTACCA AAGAGAGAATCTCCAAGAAACGACGTTG

Coding sequence (CDS) from alignment at scaffold_105:686459..691036+

>TCONS_00046015 ID=TCONS_00046015|Name=TCONS_00046015|organism=Clytia hemisphaerica|type=CDS|length=4914bp|location=Sequence derived from alignment at scaffold_105:686459..691036+ (Clytia hemisphaerica)
ATGAACTTCTATCTAGTTTCTTCAAATAATTTATTTGGTTTTTCGTCAAA
CACGTTGAAAGACCTCACTCACATCGTGTTCGACATTTCAAAGGTGATAA
AAGCTGTTGGTAGGATgaagtttttaatatttgcctTTTTGCTGTTTTGG
AGTTTGCATCACTATGTAGAAGGAGGCGGTATGGCGGAGCTGGTAATCAC
TGCATTGACCGGATGGGCGGAGATGGGGCCTGGGGAGAGTGATGGTGGGG
AAGGACAAGAAATCgataaagaaatgaaagaagCACAAGGAATTTGTGCC
TTATTGGAAGGTTGCAAAACGTCAGCaatgggaaaatgtttttcggGAGA
TGATCAATCATGTTCCAAATGTTATTACGATAGTGAAACGGTTAATACAA
GGAATATCATGCGTGCTGACTTTTACGACTTTGATGAAGCACAACTGCGA
CAATGCTTCGATGCTGAACAGAATTGTTATACAGGCCGCACCCCAGAGTA
CCACGCGGATGTGTCACAAGTCGTGGAGGAGATGTTAGATTTCATGCTTT
TAAAGGGAACCAGTGTGGCCGAACGATATCAAGGagctgtttttaaaaat
gtgaaCGTTCCGCACTTTCAAAACCTTAAGACATTATACGAGACGAAGTT
TTGTGGAGAAGGGTGCGTTGCTGAGCTATATGAGGGTTGTTCGGAGTATG
TCAATATGCGGGAAGTGAAAGATTGGTGTTTGACAGTCTTCGACTGGGTA
TCAAAAGACATCCCGAATCTGAAAGGACCACCATCATATATTTTGATGTT
GGTTGGCAAATTGAGCGAAAAGCTAAGAGGTACTTCCAATGAGTTCTCAA
CGCCATCAGAGCTCACCTGCACTGGCAGTGAAGGCTGTTGGCACAATTTT
GTACCCAGGTGGGTTATAACCACAATTCGAGACGGACAAGATGGCGCCCT
TGTGGCGGCCGCCCTCACTTCCGCCATGCTGACCGCTGATTGGTTCCCAA
AGATCACTAAACATGGTGGATTTGATTCTGATTTTGGATTCGCTGTTCAA
CATTCTCTTTGGCTTGCCATCTACGCTGGTCGGTTGGGCATATCTTTGAA
GTGTAAAACCACTCTGCAAGGGACCGAACCGGTTGATTACGGAACCtcaa
tcctttgcaatagagggGAAGCAGAAAATCATGAGTTGGGAACAGGTTCG
GTTTTTGCTTCACTATGCACCCTTTTCACCGGCGCTCGACACAATATCGA
TTTGAAGTTCCGACCGGAAATCATGTCTCGACATTCGATGGGATGTACGG
AAAAAACGACCGGGATGGCCTTCATACGGCCCGGAGATTGGGTCAATACA
CACTACAGGACAAAGTCTAAACGTTTGGAAAATAGAGACCCGAACGCAGT
GTGTGTTGGCGGAGGATCCATGAAGTATGGGTTAGCGTTCATTGACCGAC
GCAAGCTCACCACCGTAGAGATCACAAAACGAGGAGTTACTTTGTATCCG
CCTTCCATAGGAGAAAGTCTTCGAAATACAGTGCGTCCTACGTGTGGACA
CATTCAGTCATTCACGAAGAGGGTGCCATTCGAAGAATGTGGCTTACGTG
GCTATGGTAGTGTGTGCAAATGGAAGCCAGTGTGGTGAATGAACTTCTAT
CTAGTTTCTTCAAATAATTTATTTGGTTTTTCGTCAAACACGTTGAAAGA
CCTCACTCACATCGTGTTCGACATTTCAAAGGTGATAAAAGCTGTTGGTA
GGATgaagtttttaatatttgcctTTTTGCTGTTTTGGAGTTTGCATCAC
TATGTAGAAGGAGGCGGTATGGCGGAGCTGGTAATCACTGCATTGACCGG
ATGGGCGGAGATGGGGCCTGGGGAGAGTGATGGTGGGGAAGGACAAGAAA
TCgataaagaaatgaaagaagCACAAGGAATTTGTGCCTTATTGGAAGGT
TGCAAAACGTCAGCaatgggaaaatgtttttcggGAGATGATCAATCATG
TTCCAAATGTTATTACGATAGTGAAACGGTTAATACAAGGAATATCATGC
GTGCTGACTTTTACGACTTTGATGAAGCACAACTGCGACAATGCTTCGAT
GCTGAACAGAATTGTTATACAGGCCGCACCCCAGAGTACCACGCGGATGT
GTCACAAGTCGTGGAGGAGATGTTAGATTTCATGCTTTTAAAGGGAACCA
GTGTGGCCGAACGATATCAAGGagctgtttttaaaaatgtgaaCGTTCCG
CACTTTCAAAACCTTAAGACATTATACGAGACGAAGTTTTGTGGAGAAGG
GTGCGTTGCTGAGCTATATGAGGGTTGTTCGGAGTATGTCAATATGCGGG
AAGTGAAAGATTGGTGTTTGACAGTCTTCGACTGGGTATCAAAAGACATC
CCGAATCTGAAAGGACCACCATCATATATTTTGATGTTGGTTGGCAAATT
GAGCGAAAAGCTAAGAGGTACTTCCAATGAGTTCTCAACGCCATCAGAGC
TCACCTGCACTGGCAGTGAAGGCTGTTGGCACAATTTTGTACCCAGGTGG
GTTATAACCACAATTCGAGACGGACAAGATGGCGCCCTTGTGGCGGCCGC
CCTCACTTCCGCCATGCTGACCGCTGATTGGTTCCCAAAGATCACTAAAC
ATGGTGGATTTGATTCTGATTTTGGATTCGCTGTTCAACATTCTCTTTGG
CTTGCCATCTACGCTGGTCGGTTGGGCATATCTTTGAAGTGTAAAACCAC
TCTGCAAGGGACCGAACCGGTTGATTACGGAACCtcaatcctttgcaata
gagggGAAGCAGAAAATCATGAGTTGGGAACAGGTTCGGTTTTTGCTTCA
CTATGCACCCTTTTCACCGGCGCTCGACACAATATCGATTTGAAGTTCCG
ACCGGAAATCATGTCTCGACATTCGATGGGATGTACGGAAAAAACGACCG
GGATGGCCTTCATACGGCCCGGAGATTGGGTCAATACACACTACAGGACA
AAGTCTAAACGTTTGGAAAATAGAGACCCGAACGCAGTGTGTGTTGGCGG
AGGATCCATGAAGTATGGGTTAGCGTTCATTGACCGACGCAAGCTCACCA
CCGTAGAGATCACAAAACGAGGAGTTACTTTGTATCCGCCTTCCATAGGA
GAAAGTCTTCGAAATACAGTGCGTCCTACGTGTGGACACATTCAGTCATT
CACGAAGAGGGTGCCATTCGAAGAATGTGGCTTACGTGGCTATGGTAGTG
TGTGCAAATGGAAGCCAGTGTGGTGAATGAACTTCTATCTAGTTTCTTCA
AATAATTTATTTGGTTTTTCGTCAAACACGTTGAAAGACCTCACTCACAT
CGTGTTCGACATTTCAAAGGTGATAAAAGCTGTTGGTAGGATgaagtttt
taatatttgcctTTTTGCTGTTTTGGAGTTTGCATCACTATGTAGAAGGA
GGCGGTATGGCGGAGCTGGTAATCACTGCATTGACCGGATGGGCGGAGAT
GGGGCCTGGGGAGAGTGATGGTGGGGAAGGACAAGAAATCgataaagaaa
tgaaagaagCACAAGGAATTTGTGCCTTATTGGAAGGTTGCAAAACGTCA
GCaatgggaaaatgtttttcggGAGATGATCAATCATGTTCCAAATGTTA
TTACGATAGTGAAACGGTTAATACAAGGAATATCATGCGTGCTGACTTTT
ACGACTTTGATGAAGCACAACTGCGACAATGCTTCGATGCTGAACAGAAT
TGTTATACAGGCCGCACCCCAGAGTACCACGCGGATGTGTCACAAGTCGT
GGAGGAGATGTTAGATTTCATGCTTTTAAAGGGAACCAGTGTGGCCGAAC
GATATCAAGGagctgtttttaaaaatgtgaaCGTTCCGCACTTTCAAAAC
CTTAAGACATTATACGAGACGAAGTTTTGTGGAGAAGGGTGCGTTGCTGA
GCTATATGAGGGTTGTTCGGAGTATGTCAATATGCGGGAAGTGAAAGATT
GGTGTTTGACAGTCTTCGACTGGGTATCAAAAGACATCCCGAATCTGAAA
GGACCACCATCATATATTTTGATGTTGGTTGGCAAATTGAGCGAAAAGCT
AAGAGGTACTTCCAATGAGTTCTCAACGCCATCAGAGCTCACCTGCACTG
GCAGTGAAGGCTGTTGGCACAATTTTGTACCCAGGTGGGTTATAACCACA
ATTCGAGACGGACAAGATGGCGCCCTTGTGGCGGCCGCCCTCACTTCCGC
CATGCTGACCGCTGATTGGTTCCCAAAGATCACTAAACATGGTGGATTTG
ATTCTGATTTTGGATTCGCTGTTCAACATTCTCTTTGGCTTGCCATCTAC
GCTGGTCGGTTGGGCATATCTTTGAAGTGTAAAACCACTCTGCAAGGGAC
CGAACCGGTTGATTACGGAACCtcaatcctttgcaatagagggGAAGCAG
AAAATCATGAGTTGGGAACAGGTTCGGTTTTTGCTTCACTATGCACCCTT
TTCACCGGCGCTCGACACAATATCGATTTGAAGTTCCGACCGGAAATCAT
GTCTCGACATTCGATGGGATGTACGGAAAAAACGACCGGGATGGCCTTCA
TACGGCCCGGAGATTGGGTCAATACACACTACAGGACAAAGTCTAAACGT
TTGGAAAATAGAGACCCGAACGCAGTGTGTGTTGGCGGAGGATCCATGAA
GTATGGGTTAGCGTTCATTGACCGACGCAAGCTCACCACCGTAGAGATCA
CAAAACGAGGAGTTACTTTGTATCCGCCTTCCATAGGAGAAAGTCTTCGA
AATACAGTGCGTCCTACGTGTGGACACATTCAGTCATTCACGAAGAGGGT
GCCATTCGAAGAATGTGGCTTACGTGGCTATGGTAGTGTGTGCAAATGGA
AGCCAGTGTGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029405XLOC_029405Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046015-proteinTCONS_00046015-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046015-exon-scaffold_105-1491911889:686459..687601TCONS_00046015-exon-scaffold_105-1491911889:686459..687601Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1510915933:686459..687601TCONS_00046015-exon-scaffold_105-1510915933:686459..687601Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1575043694:686459..687601TCONS_00046015-exon-scaffold_105-1575043694:686459..687601Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1491911889:688379..689755TCONS_00046015-exon-scaffold_105-1491911889:688379..689755Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1510915933:688379..689755TCONS_00046015-exon-scaffold_105-1510915933:688379..689755Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1575043694:688379..689755TCONS_00046015-exon-scaffold_105-1575043694:688379..689755Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1491911889:690472..691036TCONS_00046015-exon-scaffold_105-1491911889:690472..691036Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1510915933:690472..691036TCONS_00046015-exon-scaffold_105-1510915933:690472..691036Clytia hemisphaericaexon
TCONS_00046015-exon-scaffold_105-1575043694:690472..691036TCONS_00046015-exon-scaffold_105-1575043694:690472..691036Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:686459..691036 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.932828 1.07825 1.06351 1.05173 0.682056 0.501887 0.585887 0.811105 0.675278 0.97858 5.07411 1.3879 1.23164 1.10761 11.5577 13.273 0.634334 0.93034 0.0528829 0.291046 0.514477 0.670119 0.842303 0.628592 1.09873 0.862203 0.507986 0.567632 0.985807 0.831867
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046015 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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