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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046070 ID=TCONS_00046070|Name=TCONS_00046070|organism=Clytia hemisphaerica|type=transcript|length=1107bp
ctgttgtcgggtgctcgaagttagaaattttaacacccgacagtcggggG
CTGTTGTCGGGTGCTCGTAGTTAGAAATTTTAACCCCCGACAGTCGGGTG
TTGTTGTCGGGTGCTCGTAGTTAGAAATTTtaacacccgacagtcgggtg
cactTTGTCGGGTGCTATATCTTTGACGCTTTTAACAGCACCCGACACGT
AACGGGCGGGTGGCGATTTCCCAAGCAAGGGTGGAAAAGCGGGTTCTTTT
TACTACCGCCCCGCCTGTAGTGGGCGCGCGGCGTTTTTGACGAATTTACT
CTCTCGTCAAACCAATCTCTTTGGTCAAACAATGTGATTTCCGATTCTCG
GGTTTTGATTCTTGGGAGAAGTTCACGGATtaacgtttttcttttctttt
tattcattcatgcGTGATGAGCGACTTGTAAAACAGCGACACGACGATGA
AGACAAATAGAGATGTTTCATCAATGAGTCACCATATCAACGCACCCCTT
CACTAGTACTTAGCTTACCACCACCATTCTCATACAACCATTACATACAT
ACAAACTGTTTGGATGGCTGGGGACAACGTGTGTGTtacttaaaagaaga
aattggaCAACAATCTTTTTATTGATTAACAATAAtatagaccatgttca
gacgtcacggttccgtatcgttccaaaacgaaacggttctgaaaaaattg
tgaacgccaaaatttgagaaaaagaaaaaaagaagacgttacaaagcaaa
acagatcgaaacggtttcgctccactattttcatcggaatggAACTGCTT
CGTTTTCTTGcaccgaaacgttccgaaaccaatatgaacactctcgcGGA
AACACTCACGGAAACCATACCGGAATGATACGagaccgtaacgtctgaac
atggtcttNAATCACGGAAACCATACCGGAATGATACGagaccgtaacgt
ctgaacatggtcttacagacaatctttgaaatacatacaattaaaaatat
gtaaaataataaattatataTATAAGGCCATTTGATCATCAATGCATTCC
CTCTGTTTTCTTCCTGAAGGAGATAGAAAGTAGAAAGATTTATTAATAGA
CTACCAC Run BLAST on NCBI transcript from alignment at scaffold_105:469474..470785- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046070 ID=TCONS_00046070|Name=TCONS_00046070|organism=Clytia hemisphaerica|type=transcript|length=1312bp|location=Sequence derived from alignment at scaffold_105:469474..470785- (Clytia hemisphaerica)
CTGTTGTCGGGTGCTCGAAGTTAGAAATTTTAACACCCGACAGTCGGGGG
CTGTTGTCGGGTGCTCGTAGTTAGAAATTTTAACCCCCGACAGTCGGGTG
TTGTTGTCGGGTGCTCGTAGTTAGAAATTTTAACACCCGACAGTCGGGTG
CACTTTGTCGGGTGCTATATCTTTGACGCTTTTAACAGCACCCGACACGT
AACGGGCGGGTGGCGATTTCCCAAGCAAGGGTGGAAAAGCGGGTTCTTTT
TACTACCGCCCCGCCTGTAGTGGGCGCGCGGCGTTTTTGACGAATTTACT
CTCTCGTCAAACCAATCTCTTTGGTCAAACAATGTGATTTCCGATTCTCG
GGTTTTGATTCTTGGGAGAAGTTCACGGATTAACGTTTTTCTTTTCTTTT
TATTCATTCATGCGTGATGAGCGACTTGTAAAACAGCGACACGACGATGA
AGACAAATAGAGATGTTTCATCAATGAGTCACCATATCAACGCACCCCTT
CACTAGTACTTAGGTAGGCAAAAATCCATTCTGGGTATTAATTAAATTTA
TCTAGGTAGGTTTTCCCTCTTTTACCTACCTGAAAATCGCGTGTGTCTTT
AAACTCTTAAGTGACGTTCAATTTGTCTGAGCTGACTGAGTAACTTCGTC
AACTGGACGCTATATATCATTTTGTAACGACACGCTACTATGCCGAATTT
TTTGTTCTTTCTATTTAGCTTACCACCACCATTCTCATACAACCATTACA
TACATACAAACTGTTTGGATGGCTGGGGACAACGTGTGTGTTACTTAAAA
GAAGAAATTGGACAACAATCTTTTTATTGATTAACAATAATATAGACCAT
GTTCAGACGTCACGGTTCCGTATCGTTCCAAAACGAAACGGTTCTGAAAA
AATTGTGAACGCCAAAATTTGAGAAAAAGAAAAAAAGAAGACGTTACAAA
GCAAAACAGATCGAAACGGTTTCGCTCCACTATTTTCATCGGAATGGAAC
TGCTTCGTTTTCTTGCACCGAAACGTTCCGAAACCAATATGAACACTCTC
GCGGAAACACTCACGGAAACCATACCGGAATGATACGAGACCGTAACGTC
TGAACATGGTCTTNAATCACGGAAACCATACCGGAATGATACGAGACCGT
AACGTCTGAACATGGTCTTACAGACAATCTTTGAAATACATACAATTAAA
AATATGTAAAATAATAAATTATATATATAAGGCCATTTGATCATCAATGC
ATTCCCTCTGTTTTCTTCCTGAAGGAGATAGAAAGTAGAAAGATTTATTA
ATAGACTACCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046070-exon-scaffold_105-1575043694:470273..470785 | TCONS_00046070-exon-scaffold_105-1575043694:470273..470785 | Clytia hemisphaerica | exon |
| TCONS_00046070-exon-scaffold_105-1575043694:469474..470067 | TCONS_00046070-exon-scaffold_105-1575043694:469474..470067 | Clytia hemisphaerica | exon |
| TCONS_00046070-exon-scaffold_105-1510915933:470273..470785 | TCONS_00046070-exon-scaffold_105-1510915933:470273..470785 | Clytia hemisphaerica | exon |
| TCONS_00046070-exon-scaffold_105-1510915933:469474..470067 | TCONS_00046070-exon-scaffold_105-1510915933:469474..470067 | Clytia hemisphaerica | exon |
| TCONS_00046070-exon-scaffold_105-1491911889:470273..470785 | TCONS_00046070-exon-scaffold_105-1491911889:470273..470785 | Clytia hemisphaerica | exon |
| TCONS_00046070-exon-scaffold_105-1491911889:469474..470067 | TCONS_00046070-exon-scaffold_105-1491911889:469474..470067 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_105 | supercontig | scaffold_105:469474..470785 - |
Blast
The following BLAST results are available for this feature:
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