TCONS_00046074 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046074
Unique NameTCONS_00046074
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1593

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046074 ID=TCONS_00046074|Name=TCONS_00046074|organism=Clytia hemisphaerica|type=transcript|length=1593bp
ttgctCACTTTCACAAAGACTTTTTTCGGCCAAAAGGTGAAGACTTCAGG
TGTGAAAAAATGAATGGTTTTTGTTTAACTCTTCTTTTGGCGATAACGGC
ATGGCGACACGTCACGACGTCATCAGAGTACGACATTTACGACGAAAGAG
ACGAGGAACAAGATAAGGGATTAGAATATGAGGCGATGGGAATTTGTGCT
TCTTTGGCAAGATGCAAGACGAAGGCTCATGTCTGTTTTACTGAGGGAAA
TAGCTGTGATCACGTCTGTCACCGCCGTGGGAGTGCCCTCAACGCCCGTA
ACGTCATGCGGGCGGATTTCTATCAGTACGAACCGGCGCGCTACAGAGAT
GCACCTGAAGGAACCTCTCCCAGAGAAATGTACGATTATATGATTCTTAA
AGGCCCCAGCGTGGCTGACACTTACCAAGGAGCCGTCTACAAATCAGACA
CCGTAAGCACCATTGAAAATTTAAGGTCCAAATATGGCCATAAGTTTTGT
GATTCAACCTGTGAGTCAAAACTTCGGCAAGGATGCACCAAAGCTGGTAT
CTTAAGAAACGTAAAGAATTGGTGTTTGACTGCTTTGGATTGGCTGGGTA
ATATTCCGGACCTTGAAGGACCGTCGTCTTACGTCTTAAAAGTCGCTATG
GATGTGTTAAAATCCAGAAATCTAGATCTGACAGAAGGAGCTTTCGTAGC
TGCTGCCGCTACTTCTGCTTTTTTGACAGCGGACTGGTGGGGAAGCGGAG
ATACCCGGTTTGCAGACGAGTTCGGTTTTGCTGTTCAACATTCTCTCTGG
TTGGCTATCTTTGCCGGTCGCTTAAGAATCACTCTGCAACCTAAATTTCC
ACTACCCTTAACGCAAGTTGGCTCCAGCATTTCGTGTGATCTTCAAGCAg
cagaaaatttcgaattggAGACTGGGTCAGTATACGCAAGTCTTTGCACG
TTTTTGGACCAGAACACCCATATGCGATTTCGACCGGAAATTCACACGCG
GAACTCAGTCGGATGTGTGGAAAAAACGACAGGGATGGTTTATATACGAG
TTGGTGATTGGGTGAAATCGGGCGCCAAAACGAGTTGTATTGGAGGAGCA
TTTAACAAGTATGGCATCACATTTTACGATTCAAACGAATTAACCCCTGT
TGAAGTGACCATACATGGTACAACTTTGTTTCCACCCTCCATCAAAGAAA
GCTTAAAAGATATGCGGACGACGCAATGCACTACTGCGAAAGGAAATGGG
CCGAATGAAAAAGGTATTCTGGGTAAATGTGGATTGCAAACTGTTGGAGG
CATTTGCAACTGGTTTCCAGTATGGTAAACATGGCAGACTTTAATATGGT
AGATTTGACTAACTTATAAACTATTGGGCAAACCCCCTGAAATGATGACC
aactatctttcatttttagATATGTTATAGAGCAGCTAATTCTGAGAAGA
AAGgttgcaaaaaaatcaaaattgtcgcAATTAAGTTTTATTCCAAAATG
AAACACCAATGTCAATaaatttttgacgtcactttttcgaATGTACAACC
GAACTACAAAAAGGGCCCTGGGATCGTTTCCTGAGAAAAAAGT
Run BLAST on NCBI

protein sequence of TCONS_00046074-protein

>TCONS_00046074-protein ID=TCONS_00046074-protein|Name=TCONS_00046074-protein|organism=Clytia hemisphaerica|type=polypeptide|length=441bp
AHFHKDFFRPKGEDFRCEKMNGFCLTLLLAITAWRHVTTSSEYDIYDERD
EEQDKGLEYEAMGICASLARCKTKAHVCFTEGNSCDHVCHRRGSALNARN
VMRADFYQYEPARYRDAPEGTSPREMYDYMILKGPSVADTYQGAVYKSDT
VSTIENLRSKYGHKFCDSTCESKLRQGCTKAGILRNVKNWCLTALDWLGN
IPDLEGPSSYVLKVAMDVLKSRNLDLTEGAFVAAAATSAFLTADWWGSGD
TRFADEFGFAVQHSLWLAIFAGRLRITLQPKFPLPLTQVGSSISCDLQAA
ENFELETGSVYASLCTFLDQNTHMRFRPEIHTRNSVGCVEKTTGMVYIRV
GDWVKSGAKTSCIGGAFNKYGITFYDSNELTPVEVTIHGTTLFPPSIKES
LKDMRTTQCTTAKGNGPNEKGILGKCGLQTVGGICNWFPVW
Run BLAST on NCBI

transcript from alignment at scaffold_105:677664..686863-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046074 ID=TCONS_00046074|Name=TCONS_00046074|organism=Clytia hemisphaerica|type=transcript|length=9200bp|location=Sequence derived from alignment at scaffold_105:677664..686863- (Clytia hemisphaerica)
TTGCTCACTTTCACAAAGACTTTTTTCGGCCAAAAGGTGAAGACTTCAGG TGAGGATTATAGTTTATATGTTTTGCATTCCCAGCTGGCACACAACGTTG TTTTAACGTTCATATAACGTTATATGGACGTTGTGAACGTTAGAAAAACG TTGAAACAACGTTATGTGATAGCTGGGTTGTCAGAGGGAGGGAACTTTTG AAACTCATTAGTTTTGTGCCTCACTAATGTATGATACTGATTTCCCCAAT GAGATGTAGCCGAAAGGTATAGTCGAATCTCCTTTGTAGGATTTGAAGTC ATATCTTATTCTATATATAAGCTGCACAGCCCACGCGTGGTTTTCATACA AACGCTAGATTGGAAGTAAACTTTACCGCGTCAGAACTCGTAAAATGTAA AATGCAAAATGTAAAATGGCTTCACTTTTGTATTTCTGGGAAATGTTGAA GATTCCTCACTAGCATTCGGCTATATCTCATTGTATTTCATACTGATACT CTTTAGAGGGACTGCGAATCGGCCTCAAGACCCCAGGGAGGGGCACTCGA TTTGAAAACGACCATATGAGCGGCTCAAAATAAAGTCTTAGAAATTAAAC CCATATACAGTGCAGGAAAATTTGGATATCTCTGGACGGGGCTTCAGAAG TCCGACACTTTCTTGTCCGAAAAAAAAGTCCAACAAGGCAATAGATTGCG CTTCAGTTTTGGCACAATTTCAAAATGGTTTCAAAATTATATTCGTCGAT GGGGTGGGGGGGGGGGAGGTTTTGCTGACTTGCTGTTTTTTTTGTTTTTG TTTTTGAGGGGGGGCTTCCTGTCTTACATTGGGTTAGCCATAAGACATAA AGAGACTCTGAAGATCAAAGACCATGCGACAATATTTTCGGACGAAAAAG CAGTCAGAGGAGACAGACTTCCGGGCTGATTCAATTTCGTCTGCATTCGG ACTGTTTTGTTGTCGGACTAGAAAGTGTCGGACTAGAAAGTGTCGGACCA GAAAGTGTCGGACTAGTGAGATGTACCCCTCATGACATACATTTCAGATA AACATGGCAATATTTACTTTACAAATTTAGAGAAGATAAAACTCTTATGT TTTTTATTACCATATCGCGAGATTTCAAAGAAAGCCTAAATGTTGAACAA ACTTTGAGAAAATGAGACATCAGGTCGCTAATACGTCTCTTTATAATTTT TCAGGTGTGAAAAAATGAATGGTTTTTGTTTAACTCTTCTTTTGGCGATA ACGGCATGGCGACACGTCACGACGTCATCAGAGTACGACATTTACGACGA AAGAGACGAGGAACAAGATAAGGGATTAGAATATGAGGCGATGGGAATTT GTGCTTCTTTGGCAAGATGCAAGACGAAGGCTCATGTCTGTTTTACTGAG GTAAGAACAGCTGTAATCAGAGCCATTAAATTTTGTCAACAGTCTTTTGT CAACTGTTCTGATATTTTCGTCCTTTTTTAGATCTAAAGTATGTCTTAAA AAAGCGAGTCAACAACTTTAACGTAAAAGTATACAACATGGAAAAAATAT TTCACAATAATTTTTATATCGTTAGATAGGATTTTAATTTCTCTTTCCGA AAATATAATATTTACTTTTAAACAAAAAATATTACGCTTAAAATTCAAGA TTTTCAGTTATTGATATGTTCTTAATGCCTTAACGATCAATTAACTCGAG ATATCAAAAGAAAAACCGGTTTGATTACTACTTGTTTTTTTAGATTTTAA AATTGCAGAAGAGTTGTTAAGTTGCGATTTTTATACTATTGTGATGCTCG TGAAATTGCGAATCTAAAAAAGTAAAATTTGTTAAAATTGCGTTAATATT TAGAAACAGTTAAACATTAGCACATCACGTCAAAAAGTTATAAGAAAATG TTCCTATAAAAAGTGTTCACTTTAGAAAAGGTTTTAATTGATGATTAAGA AGCCACTGGAGGGTATCGGACCGAAATACAGTTAATACTCGCTTTTTTGA TAACAATTTCGGACAAATTTTATATTTTCAGAAAGTTTAGTAAGAGATCT TTCGAATGGTGTAAAAATTACTACAAATGATTAAAAATTAAAAAAAGTAA AGCACTTTGAAGTTGCTGACCCGCTTTTTTTAAGACATAATGGCTGCGTT TAGGCCAACTGGCATTTGTAATTTGGCATTTGTAATTTGGCATTTGCTCA TGAGGGATTCGATTTTAATAGCTTTTTCATTGTATTTTCTGTCATGGCAT TTAAGGAATCGTCTTTTTAGAGTCATTGGCTGCGTTTAGACCAACTGGGA TTTGTAATTTGGCATTTGCCCATGAGGGATTCGATTGTAATAGCTTTCCC TTCATATTTTCTGTCATGGCATTTAAGGTATCGTCTTTTTAGAGTCATTG GCTGCGTTTAGACCAACTGGGATTTGTAATTTGGCATTTGCCCATGAGGG ATTCGATTGTAATAGCTTTCCCTTCATATTTTCTGTCATGGCATTTAAGG TATCGTCTTTTTAGAGTCATTGGCTGCGTTTAGACCAACTGGGATTTGTA ATTTGGCATTTGCCCATGAGGGATTCGATTGTAATAGCTTTCCCTTCATA TTTTCTGTCATGGCATTTAAGGTATCGTCTTTTTAGAGTCATTACTGAAA AGGTGATTCCCTCAAGTTCAACTTTGACAGATCAAACAATGAAAAGCATG AAATTTCTCAAAAACTGCAGTCATTAAGACTGAAACTTTTTGCCGTAGGG CTAGGCTATGGCAAATTTTGCAAATTTTACAATCTATAGAAAGAACTGAA TAAAAAACGTGCAAATAGTTTAAAAAATCAAAAATGACATTTTTGATTTT TTAAACTATTTGCACGTTTTTTATTCAGTTCTTTCTATAGATTGTAAAAT TTGCAAGATTTGCCATAGCCTAGCCCTACGGCAAAAAGTTTCAGTCTTAA TGACTGCAGTTTTTGAGAAATTTCATGCTTTTCATTGTTTGATCTGTCAA AGTTGAACTTGAGGGAATCACCTTTTCAGTAATGACTCTAAAAAGACGAT TCCTTAAATGCCATGACAGAAAATACAATGGGAAAGCTATTACAATCGAA TCCCTCATGAGCAAATGCCAAATTACAAATGCCAGTTGGTCTAAACGCAG CCATTGGCTGCGTTTAGACCAGCCTGGCATTTGTAATTGCTTGCAGTATT CTTTTGAATTCTATTGTTCCGCGCAATTGTTCGGTTTGTCAAATGCCTAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNAACTGAGGCTGGGCATGTTCTTAAGAT GTTCTTAATTTTTCGACGAATTTCAGCCTATATGTTCTTATAAACTAGGT TCTAATAAAAAAAAAAACGTGTATGAGTAGAAAGTTTTATGTGCGTGTTC ACAAAATTGTATTTTAAGCTGTCCCTCTTTTTTCTTTGTCATTACGATTA ATTTATAGGTTGTAACTACCTTTTGTGACAAGCCTGTGTGATGGAGAACG TTCTTATGTTTTAGCGATAACACACACAAACTTTTCTACTCAATCGCATG TTCAAACTCGATACTTTAATTAGGGACACCCTGTATAGTCCGTCTAGTTT CATCTGGATAATGATTTTTTTCGAGTGCTTCATTTTCATTGTTTTTAATA ATCGAAGAAGACGTTCAGCTGCTAAAAAGTCGTTAACTATTATCCAGATG ATCGTGGATGGACAGGACTATGGGTGGGTTTACATCTGTAGGAAAGAATC GATTAACACTCCTTTTGTCGATAACAATTCAGACATAAAAGAAACAAAAG CTCAAAATCACATTTAAGAATTATTTTATGCCCCCCCCCCAGCGGTTTGC GTGAATGCGTGAATGGGCATTTTGGGTTGCGTGAATCCGTGAAAATTTAA AAAAAAAATGCGTGAATGCGTGAATTGAAAAAACTTGCGTAAACGTGAAA ATCCACTTTTTCATTGCGTGAATGCGTGAATCTGGGCTATTTTGTGCGAG AATACGTGAATCCACCGATTTTGTGCAGTTTTCCCGATTTTCCAATGTTT CCCCGATTTTTCCCGAACATTTTCCGATTTTCTGAAAAATTGGGTTATTG CATGAAACTCGGGGAAATTTGCGTGAATGCGTGAATTTCTAAAAAAATTG CGTGATTGCGTGAATTGAGGATCCGCTGGGGGGGCCTCTTTTATAAACGT AATCGATCTTCCCCTCGTTAAGGCCTTTGTTTCAAGAGGTGGGCATGGGC ATCTCTTAAGACAAAGGGCTTAACGAAGAGAAGATCAATTAATATTTACA AAGGGATCTTGTAAACGATTTTACAATTAATTTTAAATAAATAGAAAATT GGAGCATGAATATTTGTTTATGAAAAGTGCGCAAATGATTTTTTTCAATC AAATTGAACTGTGCAGCGTGAACTTTTATGTATAGATCGAAAAGTTTTTT TGAACCAATGAGAAAACTGGGACCAAAGGGAAAATCAATAATAACTTAAA AAATCCTGATGAAATAAAAACAAATCGTGCTATTTCAATTGTATTTCTTA ATCGATTCTCTCCTAGATGTAAACCCACCCTATACTTCTTAACCCTATTC ATACTAGGCTTTTAGGGGCGGTTCAGAACTAGGGGGGGGCTTTTCCTGTA CCACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CCTGTTAGCTTAAGCCGTCGGTGGAAAAACACCCCCAAAGTTTATCACTG ATGACTTTAAAAATCATCAAAAACTACAAAGAAAGAGGCCTTTTTAGTCA GCCAGACAACTGAAAAGGAATTTTCACAGAGATGACGCTCTAAGATTAAA CCCAACGAACCCAAACATTTTATAAGCCAGAAGGTTTTAAGCTGAATGTG TTTAAAGTAGGTAAGAGATGTTAACTTTAGTATTTTATCTTACTTTTTGT AGGGAAATAGCTGTGATCACGTCTGTCACCGCCGTGGGAGTGCCCTCAAC GCCCGTAACGTCATGCGGGCGGATTTCTATCAGTACGAACCGGCGCGCTA CAGAGATGCACCTGAAGGAACCTCTCCCAGAGAAATGTACGATTATATGA TTCTTAAAGGCCCCAGCGTGGCTGACACTTACCAAGGAGCCGTCTACAAA TCAGACACCGTAAGCACCATTGAAAATTTAAGGTCCAAATATGGCCATAA GTTTTGTGATTCAACCTGTGAGTCAAAACTTCGGCAAGGATGCACCAAAG CTGGTATCTTAAGAAACGTAAAGAATTGGTGTTTGACTGCTTTGGATTGG CTGGGTAATATTCCGGACCTTGAAGGACCGTCGTCTTACGTCTTAAAAGT CGCTATGGATGTGTTAAAATCCAGAAATCTAGATCTGACAGAAGGAGCTT TCGTAGCTGCTGCCGCTACTTCTGCTTTTTTGACAGCGGACTGGTGGGGA AGCGGAGATACCCGGTTTGCAGACGAGTTCGGTTTTGCTGTTCAACATTC TCTCTGGTTGGCTATCTTTGCCGGTCGCTTAAGAATCACTCTGCAACCTA AATTTCCACTACCCTTAACGCAAGTTGGCTCCAGCATTTCGTGTGATCTT CAAGCAGCAGAAAATTTCGAATTGGAGACTGGGTCAGTATACGCAAGTCT TTGCACGTTTTTGGACCAGAACACCCATATGCGATTTCGACCGGAAATTC ACACGCGGAACTCAGTCGGATGTGTGGAAAAAACGACAGGGATGGTTTAT ATACGAGTTGGTGATTGGGTGAAATCGGGCGCCAAAACGAGTTGTATTGG AGGAGCATTTAACAAGTATGGCATCACATTTTACGATTCAAACGAATTAA CCCCTGTTGAAGTGACCATACATGGTACAACTTTGTTTCCACCCTCCATC AAAGAAAGCTTAAAAGATATGCGGACGACGCAATGCACTACTGCGAAAGG AAATGGGCCGAATGAAAAAGGTATTCTGGGTAAATGTGGATTGCAAACTG TTGGAGGCATTTGCAACTGGTTTCCAGTATGGTAAACATGGCAGACTTTA ATATGGTAGATTTGACTAACTTATAAACTATTGGGCAAACCCCCTGAAAT GATGACCAACTATCTTTCATTTTTAGATATGTTATAGAGCAGCTAATTCT GAGAAGAAAGGTTGCAAAAAAATCAAAATTGTCGCAATTAAGTTTTATTC CAAAATGAAACACCAATGTCAATAAATTTTTGACGTCACTTTTTCGAATG TACAACCGAACTACAAAAAGGGCCCTGGGATCGTTTCCTGAGAAAAAAGT

Coding sequence (CDS) from alignment at scaffold_105:677664..686863-

>TCONS_00046074 ID=TCONS_00046074|Name=TCONS_00046074|organism=Clytia hemisphaerica|type=CDS|length=3978bp|location=Sequence derived from alignment at scaffold_105:677664..686863- (Clytia hemisphaerica)
GGAAATAGCTGTGATCACGTCTGTCACCGCCGTGGGAGTGCCCTCAACGC
CCGTAACGTCATGCGGGCGGATTTCTATCAGTACGAACCGGCGCGCTACA
GAGATGCACCTGAAGGAACCTCTCCCAGAGAAATGTACGATTATATGATT
CTTAAAGGCCCCAGCGTGGCTGACACTTACCAAGGAGCCGTCTACAAATC
AGACACCGTAAGCACCATTGAAAATTTAAGGTCCAAATATGGCCATAAGT
TTTGTGATTCAACCTGTGAGTCAAAACTTCGGCAAGGATGCACCAAAGCT
GGTATCTTAAGAAACGTAAAGAATTGGTGTTTGACTGCTTTGGATTGGCT
GGGTAATATTCCGGACCTTGAAGGACCGTCGTCTTACGTCTTAAAAGTCG
CTATGGATGTGTTAAAATCCAGAAATCTAGATCTGACAGAAGGAGCTTTC
GTAGCTGCTGCCGCTACTTCTGCTTTTTTGACAGCGGACTGGTGGGGAAG
CGGAGATACCCGGTTTGCAGACGAGTTCGGTTTTGCTGTTCAACATTCTC
TCTGGTTGGCTATCTTTGCCGGTCGCTTAAGAATCACTCTGCAACCTAAA
TTTCCACTACCCTTAACGCAAGTTGGCTCCAGCATTTCGTGTGATCTTCA
AGCAGCAGAAAATTTCGAATTGGAGACTGGGTCAGTATACGCAAGTCTTT
GCACGTTTTTGGACCAGAACACCCATATGCGATTTCGACCGGAAATTCAC
ACGCGGAACTCAGTCGGATGTGTGGAAAAAACGACAGGGATGGTTTATAT
ACGAGTTGGTGATTGGGTGAAATCGGGCGCCAAAACGAGTTGTATTGGAG
GAGCATTTAACAAGTATGGCATCACATTTTACGATTCAAACGAATTAACC
CCTGTTGAAGTGACCATACATGGTACAACTTTGTTTCCACCCTCCATCAA
AGAAAGCTTAAAAGATATGCGGACGACGCAATGCACTACTGCGAAAGGAA
ATGGGCCGAATGAAAAAGGTATTCTGGGTAAATGTGGATTGCAAACTGTT
GGAGGCATTTGCAACTGGTTTCCAGTATGGTAAGTGTGAAAAAATGAATG
GTTTTTGTTTAACTCTTCTTTTGGCGATAACGGCATGGCGACACGTCACG
ACGTCATCAGAGTACGACATTTACGACGAAAGAGACGAGGAACAAGATAA
GGGATTAGAATATGAGGCGATGGGAATTTGTGCTTCTTTGGCAAGATGCA
AGACGAAGGCTCATGTCTGTTTTACTGAGGCTCACTTTCACAAAGACTTT
TTTCGGCCAAAAGGTGAAGACTTCAGGGAAATAGCTGTGATCACGTCTGT
CACCGCCGTGGGAGTGCCCTCAACGCCCGTAACGTCATGCGGGCGGATTT
CTATCAGTACGAACCGGCGCGCTACAGAGATGCACCTGAAGGAACCTCTC
CCAGAGAAATGTACGATTATATGATTCTTAAAGGCCCCAGCGTGGCTGAC
ACTTACCAAGGAGCCGTCTACAAATCAGACACCGTAAGCACCATTGAAAA
TTTAAGGTCCAAATATGGCCATAAGTTTTGTGATTCAACCTGTGAGTCAA
AACTTCGGCAAGGATGCACCAAAGCTGGTATCTTAAGAAACGTAAAGAAT
TGGTGTTTGACTGCTTTGGATTGGCTGGGTAATATTCCGGACCTTGAAGG
ACCGTCGTCTTACGTCTTAAAAGTCGCTATGGATGTGTTAAAATCCAGAA
ATCTAGATCTGACAGAAGGAGCTTTCGTAGCTGCTGCCGCTACTTCTGCT
TTTTTGACAGCGGACTGGTGGGGAAGCGGAGATACCCGGTTTGCAGACGA
GTTCGGTTTTGCTGTTCAACATTCTCTCTGGTTGGCTATCTTTGCCGGTC
GCTTAAGAATCACTCTGCAACCTAAATTTCCACTACCCTTAACGCAAGTT
GGCTCCAGCATTTCGTGTGATCTTCAAGCAGCAGAAAATTTCGAATTGGA
GACTGGGTCAGTATACGCAAGTCTTTGCACGTTTTTGGACCAGAACACCC
ATATGCGATTTCGACCGGAAATTCACACGCGGAACTCAGTCGGATGTGTG
GAAAAAACGACAGGGATGGTTTATATACGAGTTGGTGATTGGGTGAAATC
GGGCGCCAAAACGAGTTGTATTGGAGGAGCATTTAACAAGTATGGCATCA
CATTTTACGATTCAAACGAATTAACCCCTGTTGAAGTGACCATACATGGT
ACAACTTTGTTTCCACCCTCCATCAAAGAAAGCTTAAAAGATATGCGGAC
GACGCAATGCACTACTGCGAAAGGAAATGGGCCGAATGAAAAAGGTATTC
TGGGTAAATGTGGATTGCAAACTGTTGGAGGCATTTGCAACTGGTTTCCA
GTATGGTAAGTGTGAAAAAATGAATGGTTTTTGTTTAACTCTTCTTTTGG
CGATAACGGCATGGCGACACGTCACGACGTCATCAGAGTACGACATTTAC
GACGAAAGAGACGAGGAACAAGATAAGGGATTAGAATATGAGGCGATGGG
AATTTGTGCTTCTTTGGCAAGATGCAAGACGAAGGCTCATGTCTGTTTTA
CTGAGGCTCACTTTCACAAAGACTTTTTTCGGCCAAAAGGTGAAGACTTC
AGGGAAATAGCTGTGATCACGTCTGTCACCGCCGTGGGAGTGCCCTCAAC
GCCCGTAACGTCATGCGGGCGGATTTCTATCAGTACGAACCGGCGCGCTA
CAGAGATGCACCTGAAGGAACCTCTCCCAGAGAAATGTACGATTATATGA
TTCTTAAAGGCCCCAGCGTGGCTGACACTTACCAAGGAGCCGTCTACAAA
TCAGACACCGTAAGCACCATTGAAAATTTAAGGTCCAAATATGGCCATAA
GTTTTGTGATTCAACCTGTGAGTCAAAACTTCGGCAAGGATGCACCAAAG
CTGGTATCTTAAGAAACGTAAAGAATTGGTGTTTGACTGCTTTGGATTGG
CTGGGTAATATTCCGGACCTTGAAGGACCGTCGTCTTACGTCTTAAAAGT
CGCTATGGATGTGTTAAAATCCAGAAATCTAGATCTGACAGAAGGAGCTT
TCGTAGCTGCTGCCGCTACTTCTGCTTTTTTGACAGCGGACTGGTGGGGA
AGCGGAGATACCCGGTTTGCAGACGAGTTCGGTTTTGCTGTTCAACATTC
TCTCTGGTTGGCTATCTTTGCCGGTCGCTTAAGAATCACTCTGCAACCTA
AATTTCCACTACCCTTAACGCAAGTTGGCTCCAGCATTTCGTGTGATCTT
CAAGCAGCAGAAAATTTCGAATTGGAGACTGGGTCAGTATACGCAAGTCT
TTGCACGTTTTTGGACCAGAACACCCATATGCGATTTCGACCGGAAATTC
ACACGCGGAACTCAGTCGGATGTGTGGAAAAAACGACAGGGATGGTTTAT
ATACGAGTTGGTGATTGGGTGAAATCGGGCGCCAAAACGAGTTGTATTGG
AGGAGCATTTAACAAGTATGGCATCACATTTTACGATTCAAACGAATTAA
CCCCTGTTGAAGTGACCATACATGGTACAACTTTGTTTCCACCCTCCATC
AAAGAAAGCTTAAAAGATATGCGGACGACGCAATGCACTACTGCGAAAGG
AAATGGGCCGAATGAAAAAGGTATTCTGGGTAAATGTGGATTGCAAACTG
TTGGAGGCATTTGCAACTGGTTTCCAGTATGGTAAGTGTGAAAAAATGAA
TGGTTTTTGTTTAACTCTTCTTTTGGCGATAACGGCATGGCGACACGTCA
CGACGTCATCAGAGTACGACATTTACGACGAAAGAGACGAGGAACAAGAT
AAGGGATTAGAATATGAGGCGATGGGAATTTGTGCTTCTTTGGCAAGATG
CAAGACGAAGGCTCATGTCTGTTTTACTGAGGCTCACTTTCACAAAGACT
TTTTTCGGCCAAAAGGTGAAGACTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029424XLOC_029424Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046074-proteinTCONS_00046074-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046074-exon-scaffold_105-1575043694:686815..686863TCONS_00046074-exon-scaffold_105-1575043694:686815..686863Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1575043694:685464..685659TCONS_00046074-exon-scaffold_105-1575043694:685464..685659Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1575043694:677664..679011TCONS_00046074-exon-scaffold_105-1575043694:677664..679011Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1510915933:686815..686863TCONS_00046074-exon-scaffold_105-1510915933:686815..686863Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1510915933:685464..685659TCONS_00046074-exon-scaffold_105-1510915933:685464..685659Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1510915933:677664..679011TCONS_00046074-exon-scaffold_105-1510915933:677664..679011Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1491911889:686815..686863TCONS_00046074-exon-scaffold_105-1491911889:686815..686863Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1491911889:685464..685659TCONS_00046074-exon-scaffold_105-1491911889:685464..685659Clytia hemisphaericaexon
TCONS_00046074-exon-scaffold_105-1491911889:677664..679011TCONS_00046074-exon-scaffold_105-1491911889:677664..679011Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:677664..686863 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.188828 1.43256 0.926716 0.810228 0 0 6.17737e-10 0 0.782391 2.35461 5.56885 1.99934 2.72439 2.59357 17.2407 23.2407 1.30259 1.15121 2.83397 1.37915 0.771345 1.20237 1.73411 0.567665 0 0 0.913889 0.750252 0.0603862 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046074 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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