TCONS_00046081 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046081
Unique NameTCONS_00046081
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2128

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046081 ID=TCONS_00046081|Name=TCONS_00046081|organism=Clytia hemisphaerica|type=transcript|length=2128bp
AGTCTCCACGATAACCCGAATCATCCTTCAACTCAAAGCGTGCGAAGGAA
AACCAACATTGCCTCATTctacgatccagaaaaattgtTAACAGACATAA
ACGCTCAATCAGGGTCTGTTTCCAAGAAACTTTCAACTTCATTCTCTTAT
GTTCGTGGTCAAAGTGGTCATCAAatcaaaagtgattcaaaaccCAACCT
TATATATTTAAACGACTTTAGATTCGACTTCAATAACTTTAATTCGTCTG
ATGCAGCTTATTTGAGTGCAATCTTAAGAAGGCTGATGAAAAAGGATGTT
CAGTTAACAGTCATATGTAGTACACTTGAAGAACTAGCTATTTTGAAATA
TGTGTTTCAACATAATTTAGAGGTATCAGAAATAACGACCTTTGCACCGT
CTTTAACAGGAAAATATCCAACCAAAGCAGAGAAATGGGAGGCTTTAAAA
ACGGGAAAAGTATTACTCACATGTTATAGAGGTTTCAGAGGCTGCGAAAT
GGACCATTGTATTTTATTTGCTAGCCCTAAAGATAACGTTCCAAAGAATT
TGTACATTGAGATGCTCACTCGAGCTATCAATTTCGTGGATATAATCGTT
CTTCCTGTAAAGAAATCAAGCAGGGTATCTCGTTTGATTGGAATTTTCGA
TAAATGGCTGCAAGCTGGTCTCGTTTCTCCTACACACGCTAAACGTTCAA
GTACAAATTCCAATTCAAGACAGATTCTTCAAGNATTGTACCACTTGATC
AAACCTGCGATCATAATGTTGAAAGACAGATTCTTCAAGTCATCGAGGAT
AGCTCGTTATTCAATCACTCCCACATCGACGCAGCAGTAACgaaTCTGCA
ACAATTCAGGACTAGACATTTCGGATACGAACTTCGAGACAGTCGAGTGA
CAATCGATGGAACAAACTACGATTTTGATGATGTTTGGGAAATTTTGAGC
GAaaagaaattcgcgaaattcgaagaaattttCCAACAAAATCCGAACAT
CGTCAACTCGTTGCGTGATGGTGGTGGTTACACACTTCTCATGGAGGCTG
TTATTGTAGATCGTTTCGACGTTTTCGTTCACTTGATGAATTATCCTCAT
GATTTTTCACTCGTGAGCAATTATGGTTACAACGTTCTTCATATTGTTGG
TGGTTATGGAGAAGTTCGTCATTTGGAAATGTTTGATCAACAAACAATCG
AAACATTGATCAATGGAAGAGACGAATCGATCAGAACACCATTGCATGAA
GCAGCATATTGGAACaaacatgacgtcatcagatggtTGTTGGCCAAAGG
AGCGGATCATGAATTGAAAAACAATAGTGGTCAACGCCCTGATGAACAGT
ATGATTGTGATGGTGTTACCAAAGAAATCATTCGATCGTTTCGTTCGTCT
tgATTGATTGATTGTTTCCATTGTTTGTTTCATCGtttccaatgacgtca
tcggttccTAATTATTTCTACattcCCAGCATGACAGCACGCATGAGAAT
TTACACCCGTCATTTTTGACGCCGTTTCTACGATTACGTTATTTATTCAT
TCCGTCTCTACAGTTCTGTTTGCGTTCAAACATTACTACCTtcattttgg
cttgtttttagaGGTATTTTCACCACTTCACTAACGTGACTATTATTTTA
CGTCAACCGTCACTAGTTTTGGTGGCGTGTCTATTCTTACGCCCTTACGT
TTCCGCCTTATGGATTACCTTGGTTAAATATGAAAAAGAGTACAGTGCTA
AAACTCATGTCACTATTGGTTTCGATTGGATCATTTCCCTTGTAAATATC
CGACTCTTTTCGCTCACTCGGTGAACTTTTGTTCAGTCAGTCGGGGAAAA
GTTTTAGATACCATTTTTAGTTTCCAGTTTTAGTTTCCATTTAGTGGAAA
ACCCTGTCAACAGTGGCCTCGGTGAAAACATGAATTTTTCTAACCTTTGC
TCCCAGGACTTTTTTGTACGATTTAGGTTTGACACCTCCACGGGTGAAAC
AATCAAGGTTAAATTATCTAAGTACTGTCAAAGTTTCACGGTCTTTTTCG
GGAGAAACTCATGGGCTGTAAATATTTGATGGTTTCAATTTAAAATTGCT
CTTCATTTCAAGCCGATGAACGTTTTTT
Run BLAST on NCBI

protein sequence of TCONS_00046081-protein

>TCONS_00046081-protein ID=TCONS_00046081-protein|Name=TCONS_00046081-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
SLHDNPNHPSTQSVRRKTNIASFYDPEKLLTDINAQSGSVSKKLSTSFSY
VRGQSGHQIKSDSKPNLIYLNDFRFDFNNFNSSDAAYLSAILRRLMKKDV
QLTVICSTLEELAILKYVFQHNLEVSEITTFAPSLTGKYPTKAEKWEALK
TGKVLLTCYRGFRGCEMDHCILFASPKDNVPKNLYIEMLTRAINFVDIIV
LPVKKSSRVSRLIGIFDKWLQAGLVSPTHAKRSSTNSNSRQILQXLYHLI
KPAIIMLKDRFFKSSRIARYSITPTSTQQ
Run BLAST on NCBI

transcript from alignment at scaffold_105:766234..776885-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046081 ID=TCONS_00046081|Name=TCONS_00046081|organism=Clytia hemisphaerica|type=transcript|length=10652bp|location=Sequence derived from alignment at scaffold_105:766234..776885- (Clytia hemisphaerica)
AGTCTCCACGATAACCCGAATCATCCTTCAACTCAAAGCGTGCGAAGGAA
AACCAACATTGCCTCATTCTACGATCCAGAAAAATTGTTAACAGACATAA
ACGCTCAATCAGGGTCTGTTTCCAAGAAACTTTCAACTTCATTCTCTTAT
GTTCGTGGTCAAAGTGGTCATCAAATCAAAAGTGATTCAAAACCCAACCT
TATATATTTAAACGACTTTAGATTCGACTTCAATAACTTTAATTCGTCTG
ATGCAGCTTATTTGAGTGCAATCTTAAGAAGGCTGATGAAAAAGGATGTT
CAGTTAACAGTCATATGTAGTACACTTGAAGAACTAGCTATTTTGAAATA
TGTGTTTCAACATAATTTAGAGGTATCAGAAATAACGACCTTTGCACCGT
CTTTAACAGGAAAATATCCAACCAAAGCAGAGAAATGGGAGGCTTTAAAA
ACGGGAAAAGTATTACTCACATGTTATAGAGGTTTCAGAGGCTGCGAAAT
GGACCATTGTATTTTATTTGCTAGCCCTAAAGATAACGTTCCAAAGAATT
TGTACATTGAGATGCTCACTCGAGCTATCAATTTCGTGGATATAATCGTT
CTTCCTGTAAAGAAATCAAGCAGGGTATCTCGTTTGATTGGAATTTTCGA
TAAATGGCTGCAAGCTGGTCTCGTTTCTCCTACACACGCTAAACGTTCAA
GTACAAATTCCAATTCAAGACAGATTCTTCAAGNATTGTACCACTTGATC
AAACCTGCGATCATAATGTTGAAAGACAGATTCTTCAAGTCATCGAGGAT
AGCTCGTTATTCAATCACTCCCACATCGACGCAGCAGTAACGTAAGTAGA
ACTTATTGTATATCGGTACTTTACATGCAATATTTATAGCAACCTTTGTT
ACTTTTTACAACGTAAGTGTTTCATCTTAGTATAGTCTCGAAAGTTTATT
ACTTACAACAGAACCTACACTAAGTGCGTAACGTAATATCATTAGTTCTA
AAAGAATCGAAGATACAGAGCACATATTCTCATTGTAACCTTCATCCGAT
AACATCCCTGTACATAACTAGTCTTGTGATACCAACGGAAGCAGATTTTG
AAAATGCTTTGGTTTTAAAGAAAGTTATTTTTTCTTATTTTTTCAGGAAT
CTGCAACAATTCAGGACTAGGTATATTTCCAATGAAATAACTTTTAAACT
GTCCTAAGGGCCATGCCCTTTTTGCTAAGTATTTAAGGAAATGTAACTAA
TTTAAACCCTACCTCCAGTTTTTGAAGATTTCAGTTACCCGTTCAAAGCT
TTTTAGATAACACAAAGGCTCCTTTACCTTTTGATTGGCGGGAAGAGTGT
CGTCATTTTTTTTTATAGCACAGAAACTAAACCTTACCTGTCTTCATGAA
AAAGACTGTTTAGATGTCGGTTAGTTTTGGACGTACTGTATGGAGGGAGC
ATTTTACACTCCGGGACTGAATTTTGATCGCAGCGCCCTTTTATTGAAGA
GAACGTACTGGCATTTTCGGATTGGGTTCGCATTGTAAATGGTGATGTAT
GTACATGTAGGCGGTGGATAAATTAGCAACTAGGTTCTTTAATACCAGAA
TTACGCAAGCCTAACTGTGCCATGGCTGGTTGTGCATCCTCGCTAATTGT
CCCAAAATTAGAGAAGAAAAGAGGTAAGCAGAATCTTGAGCAAACTTTTA
CCTGTCCCAAAGCTATGTCTGTCGAGGGTAAAGGGAGACAACACCCCTTC
TCACAGCCCCACTGGGAAACCTCCCCACTGGGAAAAATGCCCAAAATTTT
GTCCCCACTGAAAATAGATCAGACAAGCCAATCCTAACCGCAAATTATTG
TGCTATTTTTTCCAACTGAACTTTCTTGCTCAAAAACAATGGGATTAAAA
TCCCTGGTCATGAGCAAAATGGGAATATCAATCCCCATTGAGTTTTGGTC
TGCTTTTTTTACTCCCACTGGCTGAAAAAATCTCACCGGGTCTGTGAGAA
GGGTGTGTGAGGCAGGAAAAAAAGATTCAAACAGTAGTAAAACACTCTTG
CTTTCTGCTGGGTCGAATTCCCTTTTCATCCTTCCTTGTCTTGTAGACAT
TTCGGATACGAACTTCGAGACAGTCGAGTGACAATCGATGGAACAAACTA
CGATTTTGATGGTAAGTTTATTTTTTTGGAAATAAGCAACCTTGATTTTC
TGTTATGAACGGTTACGTTGATTTCCCATTTGTTGCACTGTCAAAAATGT
TGTTGGTCCAGCGCGCAGCAGAATGGACCTTTAAAAAGCAACTGATCGAA
AAGATTTTGTCTTTGTCTGGGCCTGTGCGCGCAATAAATTAACAAGTCCA
GGCTAAACCAACCGCCGATCTATAATTTTTGCCCCGCCTACCCGCGCGAT
GTTTGACCTATGTTTTGGATTGAATTGGTAGTACAGTCAAATTTCCCGGT
TAGATTAAAGGGTTGTTTCAGGTAGGGTCAGGTAGGGTTAGGGCTAGGGT
TGGGGCTGGGAGTTAACCCCTGGTTAGGGTTTTAGCCCCCGGGTAGAGTT
TGGAGTAAATACCATGTTTATAAGGAACTTTAAACTCCTTAATGCAGTTG
TTGGTTAAGGCGCTGGCGTTCTAATCATAGGTGCTTTGTATATAGTAGTC
TGAATCGCAAACCTCTACAAAACCCCAGGTAGTATAGGTCTGTGGGTTCG
AATCCCATCAGCGGCAAAAGTTTCGAAATTTCGGGAAATGCATCAAAAAC
TTTCAAAACTTAGCAATACAAAGAAAGTGTCAAAGAATAGAAGCTCAGAG
TGGAGGATGGGAAGGAAATTTTTTTGCGTCATTTAAGTAACCCGGTACGA
ACGACATGGTTATTGCCACGTCAGCTGGACCTTCACGCCGCTCCGGCTTC
TTGTGTATATTTTAATGCTGTACTTGTACTTTCTTGGGAAACGTTCATAT
TCTCTCACTATTAGGTTCCAAATAAACGGGGGGCTATTTAGAGCCAAATA
AAGGACCTTCCCCTTGAAACCTATAAATATTATTAAAAATCAATAAAAGG
GGGGGTCCTAATGAGGTCAGGGAGGTTTGGAAATTTAAAAAAAATAAACA
AGCGATGGGGGACGTTTATTTGGAACCAATGAGTAACTCTTCTTATCTTA
TTCTTAAGTTTAATGAGCACTTAAGTTTAATGAGCACAATCAGAATATTT
TTTTGGAAGACTAAAAAATACTTTTCCAATGATACCAAAATTTGTTCCTA
ACTCTCAGGCTACAAGCTTGTACGGCACAAAAACAATAAACCTTTTCAAC
AACAGTGCCTTTTTTAAAAAACCTAATAAGGGGTTTTTTCTTGCACGCTA
ATTTACTCAAATTTGACCATATTTTGGTGTACTGTTAGGGATCGATTGTG
AATGTCATTTTGGGTCGGATTCTCGCTCTGCTGTCTCTAACAGAAAAAAA
CAAAAATTCATACTTTTGGAGACCGGCTACAAGGGGCTCCATGCCACGAC
AATTTCATCTAAAAATTGAAAAGAATGTTGAATAATTGGGCTGTCGACCA
AACGTACTGTCGAAGAAGTTGAAATCTCAGTTATTCGTCACCCGGTTGTT
CGATAACTTAATTGATCGACATTAACTTTATTCCCTTTCCTATTTTTCAT
TCAAACACTTTTTATTCTATTGACTTTATGATTTGATTATCTGAGAAGAT
CGGATAATGGATGGGAAATATCATTTTTAAGAAATCAATAAGGGCGGGTT
GACGTCACTTTTTAACGTCCCAAAAAGAATTTTATAAAATTTGCTTTGAT
TTTGGCACTTACACACTTTTTTTCNACGTCCCAAAAAGACGTTTATCAAA
TTTGCTTTGATTTTGGCACTTACACATTTTTTTAGCACTTTGTAAGAATG
TCCGTGATGAAAAAGGCCAAATAATTAAGAATAATGCTATGAATATCACC
ATCATGGAATTTGGCTACTCAAGCTAAGAATGCCAATTTGAGAGCATTTT
CCATTAAAAATTGCCAATTACCCCAAGTAATGTCATTTTATGCTTGAGAC
GTATGTACTAAATGTTAAATCTAGTCTGAATTAGGATCCTAACCTAAGAA
TGCTGTAAGAATATCTTAAGATGATTTTCTCAAAAAAGTTCAGAATATCC
ATGATGAAATGGATTTTACACCATTCTTATAAAATGGCGTGTATTACATT
TCTCTTTAGTCTTCAAATGACTTCTAGAAGGCTAAGGTATTTTCGAAACC
CTGTAACTTACCTCTTTTAAATAATATCAAAATTGTTTTATTTTAGAGTT
TTGAACAAGAAGTCTGGAGTATTTTACAAAGACAATCTTTTCCAGCTATC
TTTTCCAACCTAAGACTTATCTTGACTTATCAATTTTGTTAGTACTTTAA
AAGAAAGAAAAATCCATCCTGCAATTTCCTAGTACTCTAAGAAGAAACTT
TCTTTCTTCTTTCCAACCCGGGGGGTACTAGGTTTGCGAGGTGACGGGTA
CGTCCGAGCCAAAAATCGATCCTTGAAATAATTAGTGTTTTTGGGATCCT
TAGAGAGACTTTTCCCAAAGTTTTTGTCGATTTTCACTCGATTTTTGTCC
AAATTTTTGAAAATTAAGACCTTTTGAGAGAGGAAATTTCAACTTTGGTG
AATTTTGGACGCTTACAGCATAGTATAAGAAAGCCGCGGCTGGAATGATA
ACATCTGAATTTCTGTTGTTCTATCTCTGTCGTATTTGATGACTATTTGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAATTCTGTGA
AAATTTCAAGCCAGCACCTTCAAAATGTATCATTTAAACTGACAGGAAAG
TTGTCATCTTGAATATAGTTCTTATGATTTTAATTTTGGCAAAAAACTAT
CGTTACCACAAAATACCCCTAAAATATGTCTGAAATCAGTTCAAGTGTTA
TATTGGATACAGATTCAAAGATATCTAGCAATAAAAAAACTTTTTGTGAA
GGAAAATAAGAGAAAAATTTCAAAAACTATCTACCAAAAATAAACTAAAA
ATCTTGATGTTCTTATAAATCCCGGAGACAGAGATAGAACAGCAATTAAC
TGAAAAGACAATGCAGTACATATTCCAGCCGCGGCTTTCTTATACTATGC
TTACAGAGACGGGTGGTCGTCAGTAGTCTGACACTTTTTAGTCCAACACT
TTCTAGTCCGACAATAAAAGTGTCCGACGTTGGATTTGACGAATGCGTCA
GTATTCCGACAACAATTTTGTCCGCGGACAATGAGTAAAACAAACATGTA
AAACGAAATATGAATCGCCGAAGAGGAAATCCAAAGTTCCGACTTTGAGG
TTGGGCCCCTAAACCCGACTTTTCTTAAATTTTGGGAAGCTTATTAGGAT
TAGCCTTTCAAGAGTCAATAAATTGGATTTAGCTGTTTTTACGACCCTAT
TCTTTTTTGGGAAGGGGGCTGGAATTAAAGTTTGTGATTTACAACAAACC
CTCGTAGCATAATTCTGAACATGCAAAAAGGGACCCTTAAAGGTGGTGCA
TTCCTTTTTGCTATAAATTATCTTTACGCAAATTTGATTGGTTCTTTATT
TTTAATTATGTCAAAATGTCGCCAAAAGGGGCCGTCCACATAGTAAGTAC
GCACTAAAATGTCGAAAATCGAGTACCCCTCCCCCCTGTACGCAAGCGTA
CGCAAATGGCTATACCCCCTCTGGTAAGTACGTACTTTTTTCTTTCAATC
CCCCCCCCCTCGGTTGAAGAAAATTTTGAATTCAAATCGTTTGGTTCGGA
CCTTTATTTCATACATGAAACTCAATGCTTATCAAGAAACCTTTTCTTTT
CCTTGACGCGTATAATAAGCGTAAAAGTCGACAAAAAAACAAGCGAAAAA
GGGCTATGAAAAAGATTTCTCTGCGTACGTACATTTTCCTTTGACCCCTC
CCCTCCCCCTGTACGCAAGCATACGCTTTTATGAAGACCCACCCTCCCTA
CTTAGTGCGTACGTACTATGTGGCCGGCCCCAAATTAACTTTTATTAATA
TTATCTCAGTGAAAAACTCTTATTCAATATTTGACACTCTAAAATCTTTC
GTTTTCGGACAAAAGTGACGTCGGAAAAAAGACTATTTTATAGATTCGGA
CTATTTTACTGTCAGACTAGAAAGTGTCGGACTAGTGACATGCACCCACA
CAGACTTTTTAATGGTTTTTGGCATTTTCATATAATTTTTAAAAACAAAA
GGGAGAAAATTCAAGCGATATGATATAGTCATACTGGCTCTAGCAAACGT
TATAGAAATTCAAGAAAGCAAAGTTCTGGGCAAGAAATACTATAGCGTAA
AAACCAATTGTAATCAAATGACAAATGTAACATTTTTTAACCTTGAGTCA
TTTTGTCTTTTATGGCTGCGTTTAGACCAACTGGCATTTGTAATTTGGCA
TTTGCTCATGAGGGATTCGATTTTAATAGCTTTTCCATTGTATTTTCTGT
CATGGCATTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGATCAAAC
AATGAAAAGCATGGAATTTCTCAAAAACTGCAGTCATTAAGACTGAAACT
TTTTGCCGTAGGGCTAGGCTATGGCAAATCTTGCAAATTTTACAACCTAT
AGAAAGAACTGAATAAAAAACGTGCAAATACTTTAAAAAATCGAAAATGT
CATTTTTTCTCTTTGTTTTGGTTCCTTTGTTTGATTTGAAATGCCAGAAA
AGGGGATTCCTTTGCTCAAAATGGCATTTCAAATGCCAACGAAATGCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTAGG
CATTTGACAAACCGAACAATTGCGCGGAACAATAGAATTCAAAAGAATAC
TGCAAGCAATTACAAATGCCAGGCTGGTCTAAACGCAGCCTATGTTTTAA
AGTAATTCAAAAGGAAGAAAATCTTTTACGATGATGCGAGATCTCTAGAA
AAAATGAAATCAACAGGAGTGTTGTCAATTTCAATCCCAAGGGAATTTCT
TTATCATATAAAGAAAAATCTCTGGTACGTTTTTTCATTCATTTCTTATT
TTATTCGGTGCGGCTTGTTGAGTGGTTGTGTGTGCACATATAGAAAGTTA
ATATTATTTTTGGAATGTTGAATAATATTTCATCAGGTAAAATAATTTAT
TATACAGTAGAAGGAATTTTGTCTCAAAAAGTTCTGTAGACATGTTGAAA
ATATTAGTTTGCTCTGAGAAAAGAATTTTCAAAGTCTTTTATTCGGGAGA
AACAGAACATTTGATCGACTAAGATATTTATTAAGTTTACATTTTACCCA
AGTTTAAATAATTTTTTGAATTTCCCTCTTGGAAAAAAAACAATCGGCAT
AGGCCCTTTTTACAAACTAAAGAATACGTGTATCAAACGATCCATTCAAT
TTTTCAAGCGAAAGAAATCGAAATTTACAAAAAAAGCTCTTTTTTTTTCA
AAATTTTGAGATTTGAAATTTAAAATTTAGAAAATGAGAATTTTAAAATC
AAGTTTAAGTTTCAAACGTAATTTTGTTACCATCAGCAAACGATTAATTT
ACATTTCAGAATAAAAAATTTTGAGTACCTTTCTCGTTTTTTTTCCTTTT
AACTTTTTAAGTCCGAAAGAATAGTGACGGAATTATTAAAAATTTTCTTT
ACTGATCGAAAGTTATTAACAAAGTTATAATTATTTTTTCTCCATCAATT
TGGAAATCATTTTCCTAATCCTTGTGCAAAAGTTTAACTTGGAACGATTT
TCATTTCTCTAGATATAGAAATTAAGTTTAAATTTTTTGCAGTCACGAAT
AAAAATGATTTCTTGCTGAGAAAAAAGTTTTCATTCAAAATTCAAAATCT
TTTCGCCATCAATTCGGAAATATTTTTCTCGTTCTGTTTACAAAATTTCA
GCTTCAAAGTATTTTTAGTTCCTGAGATATCGAGATTCATTTTTTGTTGA
ATTTTTTTTTTTTACTCCGTGAAAAGTTTGAATTTCTTCTTTCTTTCTTC
AGATGTTTGGGAAATTTTGAGCGAAAAGAAATTCGCGAAATTCGAAGAAA
TTTTCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGATGGTGGTGGT
TACACACTTCTCATGGAGGCTGTTATTGTAGATCGTTTCGACGTTTTCGT
TCACTTGATGAATTATCCTCATGATTTTTCACTCGTGAGCAATTATGGTT
ACAACGTTCTTCATATTGTTGGTGGTTATGGAGAAGTTCGTCATTTGGAA
ATGTTTGATCAACAAACAATCGAAACATTGATCAATGGAAGAGACGAATC
GATCAGAACACCATTGCATGAAGCAGCATATTGGAACAAACATGACGTCA
TCAGATGGTTGTTGGCCAAAGGAGCGGATCATGAATTGAAAAACAATAGT
GGTCAACGCCCTGATGAACAGTATGATTGTGATGGTGTTACCAAAGAAAT
CATTCGATCGTTTCGTTCGTCTTGGTAAGAAAAATATCAACTTTTTCATG
ATTTTTTAGGGTGGGAATATTTTTTAAACAATGAATTAATTTTTTTCTAT
TATTACGAGAAGTGTTGAAACTTTTTTTTTTTGATTTCTTTTTAAAATAG
AAGTGAAAAGTTATTTAAAAAGTCTTTTAAATTTTTCAGTCGGATAAATT
TTACCTTTTCGGAGTTCGAGTGAATGAAACGGATGAATTGATTTCGATAT
TTTGATTGAGATTTTTCATCGCATTGGAGCAGACATATTTTGGAGACGGT
TGAAATTTGCAAATAGATGGTTGTTTATGAAATGTTTTCTCAGGTTGTTA
TGAATTTATTTTTTGGTGGAGAAAGAAATTGTCGTTTTTTTTTATTTTTA
TCGATGATTGTTCATACGTTTCAAATATTTTTCATTCGATTATTTATTCT
TCAGATTGATTGATTGTTTCCATTGTTTGTTTCATCGTTTCCAATGACGT
CATCGGTTCCTAATTATTTCTACGTAAGTATATTTAATCATGTACTTGGT
TTCCGGCTGATGTGAAATTGCCTAAAGCCTAAATTTTTCTGCATACCGGA
ATTTTTTGAAAAAAGTGGATCCATTCAAAAATCTTGGAAAGGAGGGCTTG
GTTAACCTGTACCAAATTCTTCTTGGTGGACTGAAAAGACTAAGGGGAAA
TTCAGTATGATGTACAGTTCGGACTTTTATGTGACTGAGACGAATCCACG
CAAGTCTCGATTGTAAAGAGTTGAAATATCTTCAATTAGTCGAATAAATG
CAATTGTTTCTTTCTGTAGTAAAAATAGCGCATAAAGCCTATAAAGGCTA
TACCTCAAAGAAGTTAACTAGTTTTTATAAAAAGACTCCGTATTCCGCGT
TTTTCAAACTTTTCCACCACATCAGATTTTCAGCATTCTCATTAGCCGCT
TTTTACCATTTTTATAAAAACTATTTATTCATCTTCGAGTCAGCGAGTTT
TGAAGTGCAATTAACCTCCTAAATTTTCAATTTTTTCATTTTTAGATTCC
CAGCATGACAGCACGCATGAGAATTTACACCCGTCATTTTTGACGCCGTT
TCTACGATTACGTTATTTATTCATTCCGTCTCTACAGTTCTGTTTGCGTT
CAAACATTACTACCTTCATTTTGGCTTGTTTTTAGAGGTATTTTCACCAC
TTCACTAACGTGACTATTATTTTACGTCAACCGTCACTAGTTTTGGTGGC
GTGTCTATTCTTACGCCCTTACGTTTCCGCCTTATGGATTACCTTGGTTA
AATATGAAAAAGAGTACAGTGCTAAAACTCATGTCACTATTGGTTTCGAT
TGGATCATTTCCCTTGTAAATATCCGACTCTTTTCGCTCACTCGGTGAAC
TTTTGTTCAGTCAGTCGGGGAAAAGTTTTAGATACCATTTTTAGTTTCCA
GTTTTAGTTTCCATTTAGTGGAAAACCCTGTCAACAGTGGCCTCGGTGAA
AACATGAATTTTTCTAACCTTTGCTCCCAGGACTTTTTTGTACGATTTAG
GTTTGACACCTCCACGGGTGAAACAATCAAGGTTAAATTATCTAAGTACT
GTCAAAGTTTCACGGTCTTTTTCGGGAGAAACTCATGGGCTGTAAATATT
TGATGGTTTCAATTTAAAATTGCTCTTCATTTCAAGCCGATGAACGTTTT
TT

Coding sequence (CDS) from alignment at scaffold_105:766234..776885-

>TCONS_00046081 ID=TCONS_00046081|Name=TCONS_00046081|organism=Clytia hemisphaerica|type=CDS|length=840bp|location=Sequence derived from alignment at scaffold_105:766234..776885- (Clytia hemisphaerica)
AGTCTCCACGATAACCCGAATCATCCTTCAACTCAAAGCGTGCGAAGGAA
AACCAACATTGCCTCATTCTACGATCCAGAAAAATTGTTAACAGACATAA
ACGCTCAATCAGGGTCTGTTTCCAAGAAACTTTCAACTTCATTCTCTTAT
GTTCGTGGTCAAAGTGGTCATCAAATCAAAAGTGATTCAAAACCCAACCT
TATATATTTAAACGACTTTAGATTCGACTTCAATAACTTTAATTCGTCTG
ATGCAGCTTATTTGAGTGCAATCTTAAGAAGGCTGATGAAAAAGGATGTT
CAGTTAACAGTCATATGTAGTACACTTGAAGAACTAGCTATTTTGAAATA
TGTGTTTCAACATAATTTAGAGGTATCAGAAATAACGACCTTTGCACCGT
CTTTAACAGGAAAATATCCAACCAAAGCAGAGAAATGGGAGGCTTTAAAA
ACGGGAAAAGTATTACTCACATGTTATAGAGGTTTCAGAGGCTGCGAAAT
GGACCATTGTATTTTATTTGCTAGCCCTAAAGATAACGTTCCAAAGAATT
TGTACATTGAGATGCTCACTCGAGCTATCAATTTCGTGGATATAATCGTT
CTTCCTGTAAAGAAATCAAGCAGGGTATCTCGTTTGATTGGAATTTTCGA
TAAATGGCTGCAAGCTGGTCTCGTTTCTCCTACACACGCTAAACGTTCAA
GTACAAATTCCAATTCAAGACAGATTCTTCAAGNATTGTACCACTTGATC
AAACCTGCGATCATAATGTTGAAAGACAGATTCTTCAAGTCATCGAGGAT
AGCTCGTTATTCAATCACTCCCACATCGACGCAGCAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029428XLOC_029428Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046081-proteinTCONS_00046081-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046081-exon-scaffold_105-1575043694:776045..776885TCONS_00046081-exon-scaffold_105-1575043694:776045..776885Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1575043694:775716..775739TCONS_00046081-exon-scaffold_105-1575043694:775716..775739Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1575043694:774725..774789TCONS_00046081-exon-scaffold_105-1575043694:774725..774789Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1575043694:767912..768383TCONS_00046081-exon-scaffold_105-1575043694:767912..768383Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1575043694:767413..767481TCONS_00046081-exon-scaffold_105-1575043694:767413..767481Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1575043694:766234..766890TCONS_00046081-exon-scaffold_105-1575043694:766234..766890Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1510915933:776045..776885TCONS_00046081-exon-scaffold_105-1510915933:776045..776885Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1510915933:775716..775739TCONS_00046081-exon-scaffold_105-1510915933:775716..775739Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1510915933:774725..774789TCONS_00046081-exon-scaffold_105-1510915933:774725..774789Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1510915933:767912..768383TCONS_00046081-exon-scaffold_105-1510915933:767912..768383Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1510915933:767413..767481TCONS_00046081-exon-scaffold_105-1510915933:767413..767481Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1510915933:766234..766890TCONS_00046081-exon-scaffold_105-1510915933:766234..766890Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1491911889:776045..776885TCONS_00046081-exon-scaffold_105-1491911889:776045..776885Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1491911889:775716..775739TCONS_00046081-exon-scaffold_105-1491911889:775716..775739Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1491911889:774725..774789TCONS_00046081-exon-scaffold_105-1491911889:774725..774789Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1491911889:767912..768383TCONS_00046081-exon-scaffold_105-1491911889:767912..768383Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1491911889:767413..767481TCONS_00046081-exon-scaffold_105-1491911889:767413..767481Clytia hemisphaericaexon
TCONS_00046081-exon-scaffold_105-1491911889:766234..766890TCONS_00046081-exon-scaffold_105-1491911889:766234..766890Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:766234..776885 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.228529	0.349931	0.0683051	0.120112	0.211631	0.144874	1.18778	1.37291	1.13165	1.33164	1.96983	1.01145	9.26622	5.52836	6.56935	9.44897	4.34876	7.33362	11.7275	11.6281	6.30028	6.78296	5.61098	5.53179	6.62273	7.09243	29.0925	21.9673	18.7859	13.797
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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