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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046118 ID=TCONS_00046118|Name=TCONS_00046118|organism=Clytia hemisphaerica|type=transcript|length=916bp
gaaaacttttagattttagtAATTTAGACAGCATAACAAAGGTCTGTTAT
ATTTGaacataacaaagacaaactcaggaggtaagataaattgcattttt
actgtttttagtcatttttctaatacagaataatttcaaacttgacTTTA
CTGATATTCGAAAGCATCACTGATTGTATTATTGAAACTACCATGAGTCg
gctgatttttttaaaataaacacATGCGCAGTTAGTTTTCACATGATTAG
CCCAGCGAGCACTATCATAATTATATCGCCTCAAATAACTTGGAACGTTC
TGGAGCAGACCGACCAATCGCCAAAAATCGTGCTCCAGAACACCGAAAGT
GCTCCGTAATTTTCCGGTGTTCTGGAGCACGAAAAAACGTCACTTTTCGC
TCCGGACATTTCTCCCTTCAttttaacctgagatcagaacTTGGGACtct
ctgacaaaacatgggatggcaattgggccaccatttcactgaacctctAT
AGTCATTTAAATTGAGTTAATGAACCTCGGATTATAAAATACACAAATTC
TCTTCCGCATTGAGTAGACTtctaaatcgaaatatgaaaaaaatctgtaa
caaaaaaaaacatgcacGAGTGTCCATGCGCTCTGAGATGtagaaaaata
aatcagaagCAGTACGGATGGAGCGTTTGAGCTCACTGGTTATTTGTTCA
TCATATTGTGCAGTAAGCGGTTAGGCGGCGGACGTCCTCTGATTCTCCAA
GCGGCATCCGGCCATTTagactgaaacaaaaaattaaaaagggtgTGCTA
GCAGTGAAAGTTATCGCGACACGTTATGAGAGAACCGTTGACAGTATACc
gtgtgaagtcgggtaacttgcatagaTATCAAATGCCTGATCAATCTGGC
GGGTGGTCAGGTGACA Run BLAST on NCBI transcript from alignment at scaffold_105:701817..702732 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046118 ID=TCONS_00046118|Name=TCONS_00046118|organism=Clytia hemisphaerica|type=transcript|length=916bp|location=Sequence derived from alignment at scaffold_105:701817..702732 (Clytia hemisphaerica)
TGTCACCTGACCACCCGCCAGATTGATCAGGCATTTGATAtctatgcaag
ttacccgacttcacacgGTATACTGTCAACGGTTCTCTCATAACGTGTCG
CGATAACTTTCACTGCTAGCAcaccctttttaattttttgtttcagtctA
AATGGCCGGATGCCGCTTGGAGAATCAGAGGACGTCCGCCGCCTAACCGC
TTACTGCACAATATGATGAACAAATAACCAGTGAGCTCAAACGCTCCATC
CGTACTGcttctgatttatttttctaCATCTCAGAGCGCATGGACACTCg
tgcatgtttttttttgttacagatttttttcatatttcgatttagaAGTC
TACTCAATGCGGAAGAGAATTTGTGTATTTTATAATCCGAGGTTCATTAA
CTCAATTTAAATGACTATagaggttcagtgaaatggtggcccaattgcca
tcccatgttttgtcagagaGTCCCAAgttctgatctcaggttaaaaTGAA
GGGAGAAATGTCCGGAGCGAAAAGTGACGTTTTTTCGTGCTCCAGAACAC
CGGAAAATTACGGAGCACTTTCGGTGTTCTGGAGCACGATTTTTGGCGAT
TGGTCGGTCTGCTCCAGAACGTTCCAAGTTATTTGAGGCGATATAATTAT
GATAGTGCTCGCTGGGCTAATCATGTGAAAACTAACTGCGCATgtgttta
ttttaaaaaaatcagccGACTCATGGTAGTTTCAATAATACAATCAGTGA
TGCTTTCGAATATCAGTAAAgtcaagtttgaaattattctgtattagaaa
aatgactaaaaacagtaaaaatgcaatttatcttacctcctgagtttgtc
tttgttatgttCAAATATAACAGACCTTTGTTATGCTGTCTAAATTacta
aaatctaaaagttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046118-exon-scaffold_105-1491911889:701817..702732 | TCONS_00046118-exon-scaffold_105-1491911889:701817..702732 | Clytia hemisphaerica | exon |
| TCONS_00046118-exon-scaffold_105-1510915933:701817..702732 | TCONS_00046118-exon-scaffold_105-1510915933:701817..702732 | Clytia hemisphaerica | exon |
| TCONS_00046118-exon-scaffold_105-1575043694:701817..702732 | TCONS_00046118-exon-scaffold_105-1575043694:701817..702732 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_105 | supercontig | scaffold_105:701817..702732 . |
Blast
The following BLAST results are available for this feature:
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