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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046184 ID=TCONS_00046184|Name=TCONS_00046184|organism=Clytia hemisphaerica|type=transcript|length=1261bp
GATTTGGATTTTGTTACACAAGGAATCTCTTCAGAAATCAGGGTATGGTG
AAAGTTTTCATTTCATTAGATCTTTTGTTGGAGTTATAATTCAAAAATTC
ACAATACTAATTGATATAAAATGGGATTCATAGCTGTCCCCATAGCATAC
TCTATTGTTGgccattgatttttttttacctcGATCATTTTCTATCGACG
AGATTAGtcaattagttttttctgatattttgcatAATGACACTCTTGcg
aatgaatgaaaaagaatggcaacaatcgatgaaaaatccactgaaaatgc
tgaaaaatatggATCCTGTACCGCCAATAAATGCTTCACGAACGAAATAA
TAAAGGATAATGACATGTTACAATGCAGGAAATGCCAGAAATTCGTTCAT
TATGCTTGTTCGGAGCTTCCCGCATACCAAATTCAGCTTTGTCTGCAATA
CTGTACAAAAGCCGACGCttcgaatgtaaaaaaatgTGTTACAGTCATGC
CAatacttttggaaaaaatcaaaacaagtaagCAAAAAAGAGTCAGAAGT
AACCAAATAACGCAAACAATAACGAAAGCAGAATGTCAAGATGGAGGTCA
GCAAatatttgaatttgttttcaaCACTAGATTGCATAATCTAGAGAAGA
AAATGGAGGAACTTATGGCTATAAACAAAGCAGGCGTTGCTAAAGAACCA
AAACGGGCAACATATGCAGATATCACGAAGGAAGAGATGAAGAAACAAGA
GGTTATCAttaagaaatttatcaaaaatgaaaaagaagaaagagaagaag
atcGCTAGAAGAACTTAACTAGATGTAACATCATTGTCCATCATTTAGGT
GAAAATAAAGAGGAACAGCGGGCCGGTGACAAAGATTACGTGGATGAAGT
TGTAGGAAATCGTATGGGATTAAAGATAAACGTTGTCACCGCAGAACGAA
TTGGTGCTCGAAAGGATGATATGTTCAAGACGAAAAGATGGCGGCCATTG
AAAGTAACGTTAGGcaatgaagaagacaagaaaagAATTATGAACTCAGT
GCATAATCTAAGcgaatttttttattgtaaCTGATGACTTCTCTAAGAAA
GAACGTGAAACGTGAAAGAATGGCATGGAAAAGCTAAAGAGAAAACGAAG
AATGAGAAGGATGAATGCTGCGTATGGAAAGTGAGGGGTAGCCCTCGGAC
TAAGCTCTACTttaagaaaatatgtaaaaagaccgttattgataaactgt
aaatttaaatg Run BLAST on NCBI transcript from alignment at scaffold_106:360341..361601- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046184 ID=TCONS_00046184|Name=TCONS_00046184|organism=Clytia hemisphaerica|type=transcript|length=1261bp|location=Sequence derived from alignment at scaffold_106:360341..361601- (Clytia hemisphaerica)
GATTTGGATTTTGTTACACAAGGAATCTCTTCAGAAATCAGGGTATGGTG
AAAGTTTTCATTTCATTAGATCTTTTGTTGGAGTTATAATTCAAAAATTC
ACAATACTAATTGATATAAAATGGGATTCATAGCTGTCCCCATAGCATAC
TCTATTGTTGGCCATTGATTTTTTTTTACCTCGATCATTTTCTATCGACG
AGATTAGTCAATTAGTTTTTTCTGATATTTTGCATAATGACACTCTTGCG
AATGAATGAAAAAGAATGGCAACAATCGATGAAAAATCCACTGAAAATGC
TGAAAAATATGGATCCTGTACCGCCAATAAATGCTTCACGAACGAAATAA
TAAAGGATAATGACATGTTACAATGCAGGAAATGCCAGAAATTCGTTCAT
TATGCTTGTTCGGAGCTTCCCGCATACCAAATTCAGCTTTGTCTGCAATA
CTGTACAAAAGCCGACGCTTCGAATGTAAAAAAATGTGTTACAGTCATGC
CAATACTTTTGGAAAAAATCAAAACAAGTAAGCAAAAAAGAGTCAGAAGT
AACCAAATAACGCAAACAATAACGAAAGCAGAATGTCAAGATGGAGGTCA
GCAAATATTTGAATTTGTTTTCAACACTAGATTGCATAATCTAGAGAAGA
AAATGGAGGAACTTATGGCTATAAACAAAGCAGGCGTTGCTAAAGAACCA
AAACGGGCAACATATGCAGATATCACGAAGGAAGAGATGAAGAAACAAGA
GGTTATCATTAAGAAATTTATCAAAAATGAAAAAGAAGAAAGAGAAGAAG
ATCGCTAGAAGAACTTAACTAGATGTAACATCATTGTCCATCATTTAGGT
GAAAATAAAGAGGAACAGCGGGCCGGTGACAAAGATTACGTGGATGAAGT
TGTAGGAAATCGTATGGGATTAAAGATAAACGTTGTCACCGCAGAACGAA
TTGGTGCTCGAAAGGATGATATGTTCAAGACGAAAAGATGGCGGCCATTG
AAAGTAACGTTAGGCAATGAAGAAGACAAGAAAAGAATTATGAACTCAGT
GCATAATCTAAGCGAATTTTTTTATTGTAACTGATGACTTCTCTAAGAAA
GAACGTGAAACGTGAAAGAATGGCATGGAAAAGCTAAAGAGAAAACGAAG
AATGAGAAGGATGAATGCTGCGTATGGAAAGTGAGGGGTAGCCCTCGGAC
TAAGCTCTACTTTAAGAAAATATGTAAAAAGACCGTTATTGATAAACTGT
AAATTTAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046184-exon-scaffold_106-1575043694:360341..361601 | TCONS_00046184-exon-scaffold_106-1575043694:360341..361601 | Clytia hemisphaerica | exon |
| TCONS_00046184-exon-scaffold_106-1510915933:360341..361601 | TCONS_00046184-exon-scaffold_106-1510915933:360341..361601 | Clytia hemisphaerica | exon |
| TCONS_00046184-exon-scaffold_106-1491911889:360341..361601 | TCONS_00046184-exon-scaffold_106-1491911889:360341..361601 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_106 | supercontig | scaffold_106:360341..361601 - |
Blast
The following BLAST results are available for this feature:
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