TCONS_00046211 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046211
Unique NameTCONS_00046211
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046211 ID=TCONS_00046211|Name=TCONS_00046211|organism=Clytia hemisphaerica|type=transcript|length=158bp
ggctgaaacagaatttttggcccaggactttttggaaaggtattAATATG
ATGAACATAACTCAGTAAAAATTTCTTCCAGAAAAGGGGTGGAACAACTG
GCCGTCACGAGTTTTATGATTTGTTGGATTTTTGTGTTAGTTGCCATGGA
AATGACGg
Run BLAST on NCBI

transcript from alignment at scaffold_106:40335..40492

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046211 ID=TCONS_00046211|Name=TCONS_00046211|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at scaffold_106:40335..40492 (Clytia hemisphaerica)
cCGTCATTTCCATGGCAACTAACACAAAAATCCAACAAATCATAAAACTC
GTGACGGCCAGTTGTTCCACCCCTTTTCTGGAAGAAATTTTTACTGAGTT
ATGTTCATCATATTaatacctttccaaaaagtcctgggccaaaaattctg
tttcagcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029510XLOC_029510Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046211-exon-scaffold_106-1491911889:40335..40492TCONS_00046211-exon-scaffold_106-1491911889:40335..40492Clytia hemisphaericaexon
TCONS_00046211-exon-scaffold_106-1510915933:40335..40492TCONS_00046211-exon-scaffold_106-1510915933:40335..40492Clytia hemisphaericaexon
TCONS_00046211-exon-scaffold_106-1575043694:40335..40492TCONS_00046211-exon-scaffold_106-1575043694:40335..40492Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:40335..40492 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046211 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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