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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046224 ID=TCONS_00046224|Name=TCONS_00046224|organism=Clytia hemisphaerica|type=transcript|length=997bp
ttcaattttcaaggcaAGCTCTATCGgttaacaatagaaagaaaaaaaag
ctttCCAGACtcggttttttataatgactatggttatAACACGTGATGGT
AAGTTGGATGCTCAGACAAAGTTTGCTTAAGCTTATCGAGTATCTGGGGC
CTATGGAAGTTCAACTTAGATTCAAATATTTTACTCCTTCGCATTATTGT
TTTTAACAGGGTAGTTCAATCACAAACAAAAGGGTTAGCATGGGGATTCC
CTCTATTGTCCCGaccaaaacctcaaaatatttttgcctaactaTTTTTC
TAAGTCGATATATTCAAGTtataaagtttttgacttttaatcaGGAAGCA
ATAAAATCTAAACGTTGAAAAAGAATACtaaactattttttgaaatttca
aattgtgataaTTTCATATTAGAAATAAGGTAGACCAAAATATTTGTTAG
TATCTCAAATCATCTGTGTATCCCTTAACTTTTGAAGTAGATTTAAATAA
ttaataatttaatttaattaatgATAGCCGAGTTTGCAATTATTCTTAAG
CTCGTAGATCTCTCAAAAAGAGAGATACATTTTTGACAGTGGTGTGCCCG
AATTGCGGTCAATGTTATTTTCGATATACCGTACTTAGGTTAACTATCCA
TAAGTCCGCTCAACAACCAAATAACATTCTAAGCACTGATTACATCATAG
TTTTGAGATTTAACCAATCGGATTAATTGGTTTGTCGAGTAAACTTTTGG
ATAGTTCACCACCGTAAGtttatagatttttttgtaCTGTTTTCTAGTTT
GTTTAGTTTTCTGTATAATGTatgtagttttttttaatgacgCACTTTTT
ATTCTATTTATAATGTAATATTTATATTTAAACTTTATACACCATATaaa
gggagtttctaaacgtcgaccagaaatgacgaccacgaccggcgaccacg
atCAGCGatcagataaatttgggttatcgagttttttctctttctcc Run BLAST on NCBI transcript from alignment at scaffold_106:349643..350639 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046224 ID=TCONS_00046224|Name=TCONS_00046224|organism=Clytia hemisphaerica|type=transcript|length=997bp|location=Sequence derived from alignment at scaffold_106:349643..350639 (Clytia hemisphaerica)
ggagaaagagaaaaaactcgataacccaaatttatctgatCGCTGatcgt
ggtcgccggtcgtggtcgtcatttctggtcgacgtttagaaactcccttt
ATATGGTGTATAAAGTTTAAATATAAATATTACATTATAAATAGAATAAA
AAGTGcgtcattaaaaaaaactacatACATTATACAGAAAACTAAACAAA
CTAGAAAACAGtacaaaaaaatctataaaCTTACGGTGGTGAACTATCCA
AAAGTTTACTCGACAAACCAATTAATCCGATTGGTTAAATCTCAAAACTA
TGATGTAATCAGTGCTTAGAATGTTATTTGGTTGTTGAGCGGACTTATGG
ATAGTTAACCTAAGTACGGTATATCGAAAATAACATTGACCGCAATTCGG
GCACACCACTGTCAAAAATGTATCTCTCTTTTTGAGAGATCTACGAGCTT
AAGAATAATTGCAAACTCGGCTATcattaattaaattaaattattaaTTA
TTTAAATCTACTTCAAAAGTTAAGGGATACACAGATGATTTGAGATACTA
ACAAATATTTTGGTCTACCTTATTTCTAATATGAAAttatcacaatttga
aatttcaaaaaatagtttaGTATTCTTTTTCAACGTTTAGATTTTATTGC
TTCCtgattaaaagtcaaaaactttataACTTGAATATATCGACTTAGAA
AAAtagttaggcaaaaatattttgaggttttggtCGGGACAATAGAGGGA
ATCCCCATGCTAACCCTTTTGTTTGTGATTGAACTACCCTGTTAAAAACA
ATAATGCGAAGGAGTAAAATATTTGAATCTAAGTTGAACTTCCATAGGCC
CCAGATACTCGATAAGCTTAAGCAAACTTTGTCTGAGCATCCAACTTACC
ATCACGTGTTataaccatagtcattataaaaaaccgaGTCTGGaaagctt
ttttttctttctattgttaacCGATAGAGCTtgccttgaaaattgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046224-exon-scaffold_106-1491911889:349643..350639 | TCONS_00046224-exon-scaffold_106-1491911889:349643..350639 | Clytia hemisphaerica | exon |
| TCONS_00046224-exon-scaffold_106-1510915933:349643..350639 | TCONS_00046224-exon-scaffold_106-1510915933:349643..350639 | Clytia hemisphaerica | exon |
| TCONS_00046224-exon-scaffold_106-1575043694:349643..350639 | TCONS_00046224-exon-scaffold_106-1575043694:349643..350639 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_106 | supercontig | scaffold_106:349643..350639 . |
Blast
The following BLAST results are available for this feature:
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