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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046228 ID=TCONS_00046228|Name=TCONS_00046228|organism=Clytia hemisphaerica|type=transcript|length=1240bp
GTTGGTAACTTCCATTTTCAGCACCTTCAATATCTATAGAACGAATTTAT
aagtttttggttgttttaattgaaaactGAATAAGACGGGCCTTAATTCC
CTGGAACCACCTCAAGAACACCTAACGCACTTTGTATTGTAATTGGTGAG
CCAAAGCTGAGCATTCCAATAAAACTTTCTtcttccataagacggcaaat
AATCTGATATCCTGAtatcactttgatttctaaactttcttccgatcggg
tcaacttttttgggtacttttactagcgtgtgttgtttttacagaGTATT
TCCAATATAATCTGTtgatctgttgcaagcttcaatttttgtcattaatt
tttttaactcggcaagtcaaacacatgattttcatcaaggcaAGGGGATT
Ctctttctacatcttttgaaggttataaaagtcatttgctcaagtttttg
ctGAACTTTCTCATACTTTTTGCAGTATTTTATTAGTtgttgcaataaaa
acatatttctcttgtttgcctctaggggggattgatggtgttataatgtt
attggaaaaGTACAGCtgctgtctaaatttgataaagactggatgaaatc
gtgcttttttggactttgatGTTTTTGGCTTCAAACAACATAACACATAA
CAATGACAATCACATCTCCTATTTATcggtcttgcaaaattatgacaatg
gtctttggaatttgatcaattatattaaaatacagtttttattggaattt
tatgaagacaaaattatttttcacgcagttccggaccgcagattgtgttt
ttctgatCTTGGCGCACGTTTTTGGCTTTGACTAAATGGTTGATATGGTA
TGAATGGCGACAACAGTTTTTACATATCTCTTATCGGACCTGCAGAAAGA
GGACTGCAGACGGGTCAACCCATGTGAGGGTAATTAGGCAGTCAATATAA
GATACTTGACGAAAACGTAACATTGAGCTATAGTCAACAATAATAGCAGC
GAGCTAACGGTTGACTGCTTCTTCGATAAGTACCTACCTACTACCTCTCT
ACCTACCTtcctacctacctacctacctagCTAAACTATATTGGCTGACC
TGATTTATAAAAATTGGGGATGTTGGCAATAATTTACTTAAGTCACGTTA
CTTAATTACAAACAAGAATGATCTTAAAAAGAAATTATGGGGAAAATCCT
AATACTTTTAGACTGttaattgaattttttatttacaaag Run BLAST on NCBI transcript from alignment at scaffold_107:35060..36299- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046228 ID=TCONS_00046228|Name=TCONS_00046228|organism=Clytia hemisphaerica|type=transcript|length=1240bp|location=Sequence derived from alignment at scaffold_107:35060..36299- (Clytia hemisphaerica)
GTTGGTAACTTCCATTTTCAGCACCTTCAATATCTATAGAACGAATTTAT
AAGTTTTTGGTTGTTTTAATTGAAAACTGAATAAGACGGGCCTTAATTCC
CTGGAACCACCTCAAGAACACCTAACGCACTTTGTATTGTAATTGGTGAG
CCAAAGCTGAGCATTCCAATAAAACTTTCTTCTTCCATAAGACGGCAAAT
AATCTGATATCCTGATATCACTTTGATTTCTAAACTTTCTTCCGATCGGG
TCAACTTTTTTGGGTACTTTTACTAGCGTGTGTTGTTTTTACAGAGTATT
TCCAATATAATCTGTTGATCTGTTGCAAGCTTCAATTTTTGTCATTAATT
TTTTTAACTCGGCAAGTCAAACACATGATTTTCATCAAGGCAAGGGGATT
CTCTTTCTACATCTTTTGAAGGTTATAAAAGTCATTTGCTCAAGTTTTTG
CTGAACTTTCTCATACTTTTTGCAGTATTTTATTAGTTGTTGCAATAAAA
ACATATTTCTCTTGTTTGCCTCTAGGGGGGATTGATGGTGTTATAATGTT
ATTGGAAAAGTACAGCTGCTGTCTAAATTTGATAAAGACTGGATGAAATC
GTGCTTTTTTGGACTTTGATGTTTTTGGCTTCAAACAACATAACACATAA
CAATGACAATCACATCTCCTATTTATCGGTCTTGCAAAATTATGACAATG
GTCTTTGGAATTTGATCAATTATATTAAAATACAGTTTTTATTGGAATTT
TATGAAGACAAAATTATTTTTCACGCAGTTCCGGACCGCAGATTGTGTTT
TTCTGATCTTGGCGCACGTTTTTGGCTTTGACTAAATGGTTGATATGGTA
TGAATGGCGACAACAGTTTTTACATATCTCTTATCGGACCTGCAGAAAGA
GGACTGCAGACGGGTCAACCCATGTGAGGGTAATTAGGCAGTCAATATAA
GATACTTGACGAAAACGTAACATTGAGCTATAGTCAACAATAATAGCAGC
GAGCTAACGGTTGACTGCTTCTTCGATAAGTACCTACCTACTACCTCTCT
ACCTACCTTCCTACCTACCTACCTACCTAGCTAAACTATATTGGCTGACC
TGATTTATAAAAATTGGGGATGTTGGCAATAATTTACTTAAGTCACGTTA
CTTAATTACAAACAAGAATGATCTTAAAAAGAAATTATGGGGAAAATCCT
AATACTTTTAGACTGTTAATTGAATTTTTTATTTACAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046228-exon-scaffold_107-1575043694:35060..36299 | TCONS_00046228-exon-scaffold_107-1575043694:35060..36299 | Clytia hemisphaerica | exon |
| TCONS_00046228-exon-scaffold_107-1510915933:35060..36299 | TCONS_00046228-exon-scaffold_107-1510915933:35060..36299 | Clytia hemisphaerica | exon |
| TCONS_00046228-exon-scaffold_107-1491911889:35060..36299 | TCONS_00046228-exon-scaffold_107-1491911889:35060..36299 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_107 | supercontig | scaffold_107:35060..36299 - |
Blast
The following BLAST results are available for this feature:
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