TCONS_00046243 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046243
Unique NameTCONS_00046243
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1170

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046243 ID=TCONS_00046243|Name=TCONS_00046243|organism=Clytia hemisphaerica|type=transcript|length=1170bp
aaaagatttaaataaaatgaagaaaaaaaataataaacattGAATGAAGA
AGCGAGTGATGGCAGGTGCACCTGGACCCACCACTTCTGCCGAAGTATTG
ATCTCACTTTACAACAAAGCACAATTTGTAAGCAACCAACCTGAAGGCTG
GATAGTTGATCAAGGCTCTGGCAAATTGCGTTGTTTCAATGATGCAGTGA
ATGTAATGGTTCATAGTGCTGAGAAAAGAATTATGGGTCAAAAGACATTC
ATTGAGATTCGAACGCAAGCTGATTTAGACGCCTTCATGCATCAAATTCG
CTCCAAACCTCTGTTAACGACAGCTCTTTGCAGCAAACCGTACTCAGTAA
ATCGAGACCGTTACCAAAATGAGTCAGCCAACGTTGAAGATACTCAGCAC
ACGGAAGAATATGTTGCCATGGTGAATACAGCTCATCCCCAGATTTCCCA
AATGTTCCAAGAGGCGTACGATAAAACATCACAATTGTTAAGAGAAGACA
AAAAGTTTAGAGTGACGATCTCACTCAGTGAATCGATCAAGACATGGTTC
ATTAATAATGTTCGAATGCCCAATCAAACAGATTCGGTGACTTATGCAAC
ACATTGTGATCTTTACTTAGTGAACGGTGTTGAGGAACCAACATTTTTCG
ATCGTTGTTGTGCATGTGAAGTGATCACGCAAAAATGCTTCTGGTGTGTT
TGCTTCCCGCTGTTCTTATTGTGTTTTGTACCCTTCCACATCTACAAGAA
GTGTGTACTGGGTGTGGTTGAAAGTTCGATCAAGAGAGTTCAGCCTGTTA
TTTACCATAATGCAGTGTTCCAAAATGGTTTCAATATCATGAGTTTACTA
TGGCCACCTGGCACCTCCTTTACTACTGTTGTTAGTACTAGTTACTACCC
ACCTGGAGTGGTCCAGCAACAGCCTGGTATGTACCAGCAACAACCAGCAG
GGTACCAGCAACAACCAGCAGGGTACCAGCAACAACCAGCAGGGTATCAG
CAGTCTGCTGGGTACCATCAACCTCAATACCAGGGTAATGCACCACCACC
TTATCAACAGTGACAACAGCCTCTTGGTTTTTGCCTATAGAATGTAATGA
TATCTTTCATCTAAATTTCTCTTCAGCTAAAGGCACTACTTGCCCAAAAA
TGGTCTACATAGGGGGGGGG
Run BLAST on NCBI

protein sequence of TCONS_00046243-protein

>TCONS_00046243-protein ID=TCONS_00046243-protein|Name=TCONS_00046243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
MKKRVMAGAPGPTTSAEVLISLYNKAQFVSNQPEGWIVDQGSGKLRCFND
AVNVMVHSAEKRIMGQKTFIEIRTQADLDAFMHQIRSKPLLTTALCSKPY
SVNRDRYQNESANVEDTQHTEEYVAMVNTAHPQISQMFQEAYDKTSQLLR
EDKKFRVTISLSESIKTWFINNVRMPNQTDSVTYATHCDLYLVNGVEEPT
FFDRCCACEVITQKCFWCVCFPLFLLCFVPFHIYKKCVLGVVESSIKRVQ
PVIYHNAVFQNGFNIMSLLWPPGTSFTTVVSTSYYPPGVVQQQPGMYQQQ
PAGYQQQPAGYQQQPAGYQQSAGYHQPQYQGNAPPPYQQ
Run BLAST on NCBI

transcript from alignment at scaffold_108:219403..227447+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046243 ID=TCONS_00046243|Name=TCONS_00046243|organism=Clytia hemisphaerica|type=transcript|length=8045bp|location=Sequence derived from alignment at scaffold_108:219403..227447+ (Clytia hemisphaerica)
aaaagatttaaataaaatgaagaaaaaaaataataaacattGAATGAAGA
AGCGAGTGATGGCAGGTGCACCTGGACCCACCACTTCTGCCGAAGTATTG
ATCTCACTTTACAACAAAGCACAATTTGTAAGCAACCAACCTGAAGGCTG
GATAGTTGATCAAGGCTCTGGCAAATTGCGTTGTTTCAATGATGCAGTGA
ATGTAATGGTTCATAGTGCTGAGAAAAGAATTATGGGTCAAAAGACATTC
ATTGAGGTAGGTATACACTCtcgctataattcgaactaatcgGGTCTTGT
TCATTATTAAAAGTTCTTCCTTCTCAAGCGAAGGTTCGTTTCAATGAAGC
TTATAAAAACCCCTTTCTGTATCACCAAATTCACCAAAGTTTCAGGAACA
CGCTTCATagatccattttttcaaaaaccttgctttgaccatTGTTAGAT
CGATTTACAGCATTGAACTATTTGCCGAGGATTTGTCTTTTTGAGGCACT
TAGAATTAGTTCAATTCAAATTTAGAATGACCCGAGTGATTTCAACAATG
AGCATCGATTTTTAATCATGAAAGCTGAATTTTACCATTCGACTGTTTTT
GTTTCAGATTCGAACGCAAGCTGATTTAGACGCCTTCATGCATCAAATTC
GCTCCAAACCTCTGTTAACGACAGCTCTTTGCAGCAAACCGTACTCAGTA
AATCGAGACCGTTACCAAAATGAGTCAGCCAACGTTGAAGATACTCAGCA
CACGGAAGAATATGTTGCCATGGTGAATACAGCTCATCCCCAGATTTCCC
AAATGTTCCAAGAGGCGTACGATAAAACATCACAATTGTTAAGAGAAGAC
AAAAAGTTTAGAGTGACGGTaacagaattttatttttattttcatgttgC
TGAGCTTTTTTAGGTGGCTTTTTATCTTTATTGCGTGGTTTTGGGGTAAG
GTTTTCTTCCCTAACAACGGTTTTACTTTTATTAGCTAATATCGTCTGGA
CCCTGGATTTAGGGATGTGGCTTTTGCTTCATGGGAGGAAATAAATTTGA
AGGCCTTTAGAGGCTATTTATAGACTATTTTTGAGTGAGATTTTCTTTGT
TACAACACGGTGGGAAAAATAATAATGATTGATGCTTTGGCTAGCCGTTA
CATGGCAATACATGAATTTGCTATTAGCAGATTCGTGTAAAAAAGTCATG
AAAACGTCGAGTAATGCTTTGATTGGctaaaaaatttattgaaatatcca
aagtatgaggtaatcttAGCACTCAGCCAATCAAATATTTACTCGACGTG
ActtttacatgaatctgctgATAGGAACTTTATGTATTGGTTATATCGAC
TAATTTTAGTATTACCAACCCTCTATTCTCATGTTTATTTTAGATCTCAC
TCAGTGAATCGATCAAGACATGGTTCATTAATAATGTTCGAATGCCCAAT
CAAACAGATTCGGTGACTTATGCAACACATTGTGATCTTTACTTAGTGAA
CGGTGTTGAGGAACCAACATTTTTCGATCGTTGTTGTGCATGTGAAGTGA
TCACGCAAAAATGCTTCTGGTGTGTTTGCTTCCCGCTGTTCTTATTGTGT
TTTGTACCCTTCCACATCTACAAGAAGTGTGTACTGTAAGTCACGAAACT
TTATTTTAATCTTAGTGCTAAAAAAAGTTCTATCGTCTCAGACGAATGTT
TGTCTTAGCGAGGAATATAAAGAGGTTTTTCCGTCTTAAAATTCTGTATT
CTTCACCAAAGTCTCAAGAAtatgtgctaatttgctgtgtaaaatacATT
TGCCGTCTCAAATCTTGCTTTGACTGAATCGTTGTTATTGATAGGGAAGC
ATGAGATTAAATTTGGGTTGATCAAATTGATTTCTAGGATGAAAAGTCCT
TGCAATATCGGCTATTCAAAGGTGCGACTTTTTTAGGTCACCTATTTAGA
CACTTCTAAATGAACGAAAAAAATTATGGACAAATTCGGACGAAAAAGGG
GTTGGTTGATAAAAGTGAGACATGATAAGATTTTCTGCAGAATGAGTATA
TTTATAGAATTAAATATGGGGAGGGTGTATTTTTGTGTTTAATATTGCTT
TTTTCGAGGTAAAAGGTTGTTGAACAGAAACGCTCTTCAGTGGTGGAGAT
TCGTTGATTTCTTTTGTTGGCTATTTGATGACGCTGGGAAATGGTGAATT
TTCGCTTTTTGATGTTGAAAGTACAAGTTTTATTCACTTGGACGAGAAGA
GCTTCGTTGAGTTAGGGTTCGATGTGTTGCCTTAGGGTGTAGAAAATGGC
GGTGTTTTGGGCGGTTGTAGGTTTTCAATGGTTTCGAGGAGAGTATGTAA
GGTTGATCAATGGTTGTTTGTAGATGTTGAATAAAGATTGTGGTGGAGCA
AAAGATACGCGTTTTCGTTGGAAAGATGTTTTGTGAGTGGATTTTGGTGA
AGGTGGTGTTGGAAGGAATGAGGTTGTTTCTTTAACTTGATGTTTTTGTG
tggtttgtatttttttgattgGTGTGTTGGTTGGTGGTCGAGGAACGCGT
TTTAATGTTGGCTTATTAATTTGTAATCTTTTTGATAGCATTTTATATTG
GTTGGTTTGTTGTTTGGGAGGATTTGTtgtgatgttttgattttcttgga
GTGTCACTATTGATGGCAATATCTTTGATTGTGATGATAGCTTTTGATCA
TTCAGGTCTTTCAGAGttgttttctttggaaaatcttgaggtaaatattt
tactttttttgttggGCGTTGTGGTAAAAGTTTTCCTCGGGTTGGTTTTT
CTTCGTTACTGGGAATGTTCAAGCTTTTCTTCTCTTCTTCGGCATTATGT
TCATGGGTAATCAATTTCGAATTCTTTGCCgagaaagatatttttgttgA
TAATCTGCTCGGTTCAAAGTTGTCAAtggaaattaattttctttttttca
ctgaCTTTATTTTTTGAGGCGATTTCTTTTGTTCTGAGTCTGATTTCGAA
TCTTTGCTGGCTCTCTGAGGACAAACTGAACGCTTCCGATGGTTGACTGA
CTTAGTCTTTCTTGGCCTTGTTTTACGTCCTCTGGTAGACTCCTCTTGAA
CACGTGATCCAGATCCCAATTTATTTGAGGTTGTCTTTACAAGCTCTTTT
GAATGAGATGTCTTCTCTCGAATGGTAGACATTGTGCTCGCGTTGCCGTC
TTCCTCGGAAATCACAGAAGGCTTAGGAGATTGTCCAATATTTTGTTCTA
TCTGTTGTGGAgaatcggttctgcctccttcaaAACCTTCTAAGATTACT
GGCAGCTCGGAAGCTTCACGGTGAACATCTGCATTTTCACCAGATAGTAA
TCGTTCTAACTCCTCGTCTCCTTCCAGACTAAGAGAATCATCATAATCCT
CAATGGACGTTCGAGATGATTGTTCGTCATCACTGCATACTGATGTTTCA
TCTAAGCCTTTGTATTCCAAATGATCTTTATAAAGTTGTGATTGTAATTC
ATGGAAGCTCATATTCTTCTCTAATTCGgcgaaactgaaagaaaaaatag
GTTAGGATGATCAAAGAGTAATTATCAATGTTGTCTCACTAATTTCAGCG
ATCAGACGTTCTTAAAGAGGTAAATAGTTAGCGTTATGCAAGTGAGTAAT
ctaaaatttatatttctttttctaaatggTTGTGTTGCAGGAGGCTCTGA
GGCCCATTTTGCAACTATCGACCCTTTGAACGAGCACCCCATTAGCACCC
TTGAACTGACTACACAATtctcctcacatggcatggtTCATTTGTCAAGT
GAGTCGCTGCAaatgggaatcgaacctcagtcgcctgtgcagcaagcAAG
gttaatgaccactataccacggtGCCTTATAAGTTCAAGTTTATGACTGT
AAGCTGATATCAGTGATTCTTCAATGTAAGGTAAGTGACCCTTGCCCGCT
GGATGAAATGAATtcaaaaaggttttgttttcctTCACTTACCTTCCTTT
CAAGTATTGATACGATGCTTTCAGATATTCAATATCTGAACTCTCCTCCA
CAGCGCTGTCAATCTCTTCAAAATCTTCTTTTACAGTCTTCACACAGACA
TCAAAATCTTCTACCAATTCACTGGAACGAACAAACGTTTTTGCCAAAGA
ACTTAATATTTCTCCCTGGATTGGTGTCAGGAATGACAATCCGTTTTGAA
TTAAGTGGTCCGTGTATTGTGTTAAGAGTTGAAGGATTTCTTCGTAATGG
GTTCGGCACTCATCTAACTCCATATATCTATTTGAGAATTTAAAGGAATT
GAGTTGAAGTATGCTGGATATTTTCATATCAAGCTGCTTTGCATACTTAT
CTTACTCCATCCCTGATATTCATAAATTAAAACGTTTAATACGGAAGCAC
CCCAAATAGTCCGGGCGTTTGCCACTAGTTTTATTgcttaaatttaaaat
tgatggcAAACATCCGTTTTTTTATGGGTGTTTCCGTTTAAAACATTACG
TACTCACAAATTAATGTTTTGCTACGTCTCTGGCGAAATCAACCTGTAAA
TTAGTTGTGTGGTGGAAGGGTGCAGGGGCGGTGTTAaaaagtaagtctgc
gaccgcagtcggaggcgacccgaaggctcctcttttgatagctatctatc
cgaaggtaggggagggcgccactctttctcacTGGATttttccacttacc
cttgatccttctcttaattgctgagcatatcaagcagagaggcatcaggt
accattttgagaatctttggtatgacccggctgggggttgaacccacaac
cttgtgaaccgtagccggatgttataccactgcactacggttaCTACATT
GCACATTGCACATTGCACAATGTTTAGTCAATCCACCATGCTATCGCCGT
CAATATTTCCTGTTAATAAAAGGACTGCTAAGGTCGAATTCATCTCAAAC
TGACCTTAATCTGAGAAAGCAATAAGCCTCTTGTAAATCTTCCACATCCG
TCATTCGGTGCACCCCTTCACTATCTTCTTCGATTCTCAGCTCATGATCC
TCTGTTGACAATCGGAAATTCTCATCATAAGAGATGAGATTGTGAATCAA
AGTGTTCAATTCTTGCCACGTGTTTTTGTAAAGGGATTCGTTACCAAGGT
GAATTGCTTCTTCTTGGACGAGAATTGAATGTTGTCGAAATGGGGAAAGT
GATGTCTGACTTCCTGAAATTAGATTATATATAAAATTCTTGTTTATTTT
GCGATCGCAGTGATTGATAATTAGAGGCAACCATTGGTCACCTCTTGTGt
taactaccttatcggccctttttacgccggtcctaatttaacgccggccc
ttatttctattatggttgagttacaggaggctctgggagcccattctcgc
aactatagatgctttgagtaagcatcccgtcagcaccttgaactgactac
ccaattcccctcacatggcatgcaatcatggacaaaagatttgtagactt
ctgcaatatttgcaaaatacttcaatatcgatcaaaaacaagttcccaag
aggttctgggtgctttaCAAACCCATTCAAatctgttcaaagtctttgaa
agtcacccactgcagtctaaccacaagggcttgattatttggcttacacc
agtatcaaaacgctgattttttgcttgtggttccttcaaaagcaattcaa
aagcaattcaaaagcaatgcaacgactttgaaagtgtttttcttaacttc
cctcctttttcagacacattgaagagtcattttgctctatttctcatcat
ttttcactgaaatttcatttgtctacaaccttttgtccatgattgtgggt
tgacccgggcgaaggtttgttcacttgccaagtgaactgttgtgagtggg
aatcaaACCTTGGTCGCCTGcacaggaatcaaggttgatgtccactatac
cacaacgccTTTTTTCATTATTACCACAACGCCTTATTTCATTATTATCA
CGCCTAAgctcaatgtttttcatttttagcccggccctaatttaattcTG
ACCCCTTatgccggcccttattacgccagcgGCAAAAAAAATAACgtcaa
taagggccggcgtaaaaagggccgataatgTATCTACCGCTGTGGGCACG
AATACATCATTTTTTGagtcttttaaggcttttttggcCAGGGCTTGAGC
CaggactaattcagacataagcaaaagaagcaaaaagttATAACATGGCC
AAATTGATATTATCCTGTTACAATTATTGTTTTATTATAAAACACCAATA
TTTGTATTACTTGATTATAAACGACCCCAGTCTAAGATTTAACCCACAac
ttatcaacggcttttttcGTTATCATATCAAGAGTAGTGCTAGCATTTTT
CATCTCAACTTGTTTTAAATAGCATATCAACTTCGGGTATCTTTTTCCCC
TGTCAGCACATTTgtccaaaagaaaaatgaaacaaatatcTTACCTTGGA
AGTCTTTAACATCCATACTATTTTCTAAACTCGATGAATTTGCTGAATCA
ACATAAGAATTCATTACTTTACTTCTTTTAAACTATTctttatcaatgtt
ttttattaaaatctcaatAAAATTGGCTTTCTATCAATTTTATCGAGAAA
TAAGTGAGTACTACTGACGCTAGTAACCGCACTTTTCAGAATCTAAATTC
CTACCTAATCTAAAATGAATCGTGTTATCCTTTTTATCgatcttgaaata
aaaatatttgacgtcagatATTATTTGATAACGTCACTTTTGTTTAAAAA
CTACATTATCGTTAAAGGTTGGCTTACATCTAGACAAGAAGACTTCttct
tctggctgaactttgctttctgataattttttttgatttcttgatGATGT
TAGcaaaaaaaagcagaaaatgGAATGTTTGCATTTTCTGTCTATCGACC
CCTTGCGACCCTTCTGACGAACTTTACTCATTTCAGACGGTCTCTTGTGT
TGCGTTCCACAGTGAGGAGCGGCAATCTTGTGTTTTGATCGAACCATCTC
TTAGGTGCCTTCCTCTTGGTCTCTTATTTGCAGAATCTTGCTTAAAGCTT
TGGTACACAAGCCATGGGAACCCCTGACAGCTTAGAGATCGTCGTTAACA
AAGGTGGTTTTCGACTCAAAGGACCATCTCTTTGGTGGTCTTCCTCTTGG
TCTTTTACTCTAGTGAAACCAGAGTTTTCTCTCTCCATTTTTTAGGGGTG
TGGTTGAAAGTTCGATCAAGAGAGTTCAGCCTGTTATTTACCATAATGCA
GTGTTCCAAAATGGTAAGTTAGTTTAATTACTCTGATTTCTTCTTGATAA
AGATCTGTAAAGGTCGATGTGTTTTACGTTGTAATATCTCTGTTCACACA
ATCATTGGCTACAGTATGTTTGATTCTTTAATGATTTTGTATGCTGGTgt
attttttaaaatgtttttttgctcaaaaactCATTCAAGCAAGTATGAAA
ACATTTTCCGTTCTATCTCTTATTTCACACATAAGCCGAACAGAGAAATT
TCTCAGATTATTTACTCTTCATCAAAATTAGTACGGTATATACCAAAACA
CGAATTCGGCTTTTAAGGCTATTGGGAGTAAAGAAGGAAAGTCGCTCTGT
GCCAATGGGTTCTCTCTGGAAACCTGACCTTGTGGCCTAAATTATTTTCT
AGGTTTCAATATCATGAGTTTACTATGGCCACCTGGCACCTCCTTTACTA
CTGTTGTTAGTACTAGTTACTACCCACCTGGAGTGGTCCAGCAACAGCCT
GGTATGTACCAGCAACAACCAGCAGGGTACCAGCAACAACCAGCAGGGTA
CCAGCAACAACCAGCAGGGTATCAGCAGTCTGCTGGGTACCATCAACCTC
AATACCAGGGTAATGCACCACCACCTTATCAACAGTGACAACAGCCTCTT
GGTTTTTGCCTATAGAATGTAATGATATCTTTCATCTAAATTTCTCTTCA
GCTAAAGGCACTACTTGCCCAAAAATGGTCTACATAGGGGGGGGG

Coding sequence (CDS) from alignment at scaffold_108:219403..227447+

>TCONS_00046243 ID=TCONS_00046243|Name=TCONS_00046243|organism=Clytia hemisphaerica|type=CDS|length=5100bp|location=Sequence derived from alignment at scaffold_108:219403..227447+ (Clytia hemisphaerica)
ATGAAGAAGCGAGTGATGGCAGGTGCACCTGGACCCACCACTTCTGCCGA
AGTATTGATCTCACTTTACAACAAAGCACAATTTGTAAGCAACCAACCTG
AAGGCTGGATAGTTGATCAAGGCTCTGGCAAATTGCGTTGTTTCAATGAT
GCAGTGAATGTAATGGTTCATAGTGCTGAGAAAAGAATTATGGGTCAAAA
GACATTCATTGAGATTCGAACGCAAGCTGATTTAGACGCCTTCATGCATC
AAATTCGCTCCAAACCTCTGTTAACGACAGCTCTTTGCAGCAAACCGTAC
TCAGTAAATCGAGACCGTTACCAAAATGAGTCAGCCAACGTTGAAGATAC
TCAGCACACGGAAGAATATGTTGCCATGGTGAATACAGCTCATCCCCAGA
TTTCCCAAATGTTCCAAGAGGCGTACGATAAAACATCACAATTGTTAAGA
GAAGACAAAAAGTTTAGAGTGACGATCTCACTCAGTGAATCGATCAAGAC
ATGGTTCATTAATAATGTTCGAATGCCCAATCAAACAGATTCGGTGACTT
ATGCAACACATTGTGATCTTTACTTAGTGAACGGTGTTGAGGAACCAACA
TTTTTCGATCGTTGTTGTGCATGTGAAGTGATCACGCAAAAATGCTTCTG
GTGTGTTTGCTTCCCGCTGTTCTTATTGTGTTTTGTACCCTTCCACATCT
ACAAGAAGTGTGTACTGGGTGTGGTTGAAAGTTCGATCAAGAGAGTTCAG
CCTGTTATTTACCATAATGCAGTGTTCCAAAATGGTTTCAATATCATGAG
TTTACTATGGCCACCTGGCACCTCCTTTACTACTGTTGTTAGTACTAGTT
ACTACCCACCTGGAGTGGTCCAGCAACAGCCTGGTATGTACCAGCAACAA
CCAGCAGGGTACCAGCAACAACCAGCAGGGTACCAGCAACAACCAGCAGG
GTATCAGCAGTCTGCTGGGTACCATCAACCTCAATACCAGGGTAATGCAC
CACCACCTTATCAACAGTGAATGAAGAAGCGAGTGATGGCAGGTGCACCT
GGACCCACCACTTCTGCCGAAGTATTGATCTCACTTTACAACAAAGCACA
ATTTGTAAGCAACCAACCTGAAGGCTGGATAGTTGATCAAGGCTCTGGCA
AATTGCGTTGTTTCAATGATGCAGTGAATGTAATGGTTCATAGTGCTGAG
AAAAGAATTATGGGTCAAAAGACATTCATTGAGATTCGAACGCAAGCTGA
TTTAGACGCCTTCATGCATCAAATTCGCTCCAAACCTCTGTTAACGACAG
CTCTTTGCAGCAAACCGTACTCAGTAAATCGAGACCGTTACCAAAATGAG
TCAGCCAACGTTGAAGATACTCAGCACACGGAAGAATATGTTGCCATGGT
GAATACAGCTCATCCCCAGATTTCCCAAATGTTCCAAGAGGCGTACGATA
AAACATCACAATTGTTAAGAGAAGACAAAAAGTTTAGAGTGACGATCTCA
CTCAGTGAATCGATCAAGACATGGTTCATTAATAATGTTCGAATGCCCAA
TCAAACAGATTCGGTGACTTATGCAACACATTGTGATCTTTACTTAGTGA
ACGGTGTTGAGGAACCAACATTTTTCGATCGTTGTTGTGCATGTGAAGTG
ATCACGCAAAAATGCTTCTGGTGTGTTTGCTTCCCGCTGTTCTTATTGTG
TTTTGTACCCTTCCACATCTACAAGAAGTGTGTACTGGGTGTGGTTGAAA
GTTCGATCAAGAGAGTTCAGCCTGTTATTTACCATAATGCAGTGTTCCAA
AATGGTTTCAATATCATGAGTTTACTATGGCCACCTGGCACCTCCTTTAC
TACTGTTGTTAGTACTAGTTACTACCCACCTGGAGTGGTCCAGCAACAGC
CTGGTATGTACCAGCAACAACCAGCAGGGTACCAGCAACAACCAGCAGGG
TACCAGCAACAACCAGCAGGGTATCAGCAGTCTGCTGGGTACCATCAACC
TCAATACCAGGGTAATGCACCACCACCTTATCAACAGTGAATGAAGAAGC
GAGTGATGGCAGGTGCACCTGGACCCACCACTTCTGCCGAAGTATTGATC
TCACTTTACAACAAAGCACAATTTGTAAGCAACCAACCTGAAGGCTGGAT
AGTTGATCAAGGCTCTGGCAAATTGCGTTGTTTCAATGATGCAGTGAATG
TAATGGTTCATAGTGCTGAGAAAAGAATTATGGGTCAAAAGACATTCATT
GAGATTCGAACGCAAGCTGATTTAGACGCCTTCATGCATCAAATTCGCTC
CAAACCTCTGTTAACGACAGCTCTTTGCAGCAAACCGTACTCAGTAAATC
GAGACCGTTACCAAAATGAGTCAGCCAACGTTGAAGATACTCAGCACACG
GAAGAATATGTTGCCATGGTGAATACAGCTCATCCCCAGATTTCCCAAAT
GTTCCAAGAGGCGTACGATAAAACATCACAATTGTTAAGAGAAGACAAAA
AGTTTAGAGTGACGATCTCACTCAGTGAATCGATCAAGACATGGTTCATT
AATAATGTTCGAATGCCCAATCAAACAGATTCGGTGACTTATGCAACACA
TTGTGATCTTTACTTAGTGAACGGTGTTGAGGAACCAACATTTTTCGATC
GTTGTTGTGCATGTGAAGTGATCACGCAAAAATGCTTCTGGTGTGTTTGC
TTCCCGCTGTTCTTATTGTGTTTTGTACCCTTCCACATCTACAAGAAGTG
TGTACTGGGTGTGGTTGAAAGTTCGATCAAGAGAGTTCAGCCTGTTATTT
ACCATAATGCAGTGTTCCAAAATGGTTTCAATATCATGAGTTTACTATGG
CCACCTGGCACCTCCTTTACTACTGTTGTTAGTACTAGTTACTACCCACC
TGGAGTGGTCCAGCAACAGCCTGGTATGTACCAGCAACAACCAGCAGGGT
ACCAGCAACAACCAGCAGGGTACCAGCAACAACCAGCAGGGTATCAGCAG
TCTGCTGGGTACCATCAACCTCAATACCAGGGTAATGCACCACCACCTTA
TCAACAGTGAATGAAGAAGCGAGTGATGGCAGGTGCACCTGGACCCACCA
CTTCTGCCGAAGTATTGATCTCACTTTACAACAAAGCACAATTTGTAAGC
AACCAACCTGAAGGCTGGATAGTTGATCAAGGCTCTGGCAAATTGCGTTG
TTTCAATGATGCAGTGAATGTAATGGTTCATAGTGCTGAGAAAAGAATTA
TGGGTCAAAAGACATTCATTGAGATTCGAACGCAAGCTGATTTAGACGCC
TTCATGCATCAAATTCGCTCCAAACCTCTGTTAACGACAGCTCTTTGCAG
CAAACCGTACTCAGTAAATCGAGACCGTTACCAAAATGAGTCAGCCAACG
TTGAAGATACTCAGCACACGGAAGAATATGTTGCCATGGTGAATACAGCT
CATCCCCAGATTTCCCAAATGTTCCAAGAGGCGTACGATAAAACATCACA
ATTGTTAAGAGAAGACAAAAAGTTTAGAGTGACGATCTCACTCAGTGAAT
CGATCAAGACATGGTTCATTAATAATGTTCGAATGCCCAATCAAACAGAT
TCGGTGACTTATGCAACACATTGTGATCTTTACTTAGTGAACGGTGTTGA
GGAACCAACATTTTTCGATCGTTGTTGTGCATGTGAAGTGATCACGCAAA
AATGCTTCTGGTGTGTTTGCTTCCCGCTGTTCTTATTGTGTTTTGTACCC
TTCCACATCTACAAGAAGTGTGTACTGGGTGTGGTTGAAAGTTCGATCAA
GAGAGTTCAGCCTGTTATTTACCATAATGCAGTGTTCCAAAATGGTTTCA
ATATCATGAGTTTACTATGGCCACCTGGCACCTCCTTTACTACTGTTGTT
AGTACTAGTTACTACCCACCTGGAGTGGTCCAGCAACAGCCTGGTATGTA
CCAGCAACAACCAGCAGGGTACCAGCAACAACCAGCAGGGTACCAGCAAC
AACCAGCAGGGTATCAGCAGTCTGCTGGGTACCATCAACCTCAATACCAG
GGTAATGCACCACCACCTTATCAACAGTGAATGAAGAAGCGAGTGATGGC
AGGTGCACCTGGACCCACCACTTCTGCCGAAGTATTGATCTCACTTTACA
ACAAAGCACAATTTGTAAGCAACCAACCTGAAGGCTGGATAGTTGATCAA
GGCTCTGGCAAATTGCGTTGTTTCAATGATGCAGTGAATGTAATGGTTCA
TAGTGCTGAGAAAAGAATTATGGGTCAAAAGACATTCATTGAGATTCGAA
CGCAAGCTGATTTAGACGCCTTCATGCATCAAATTCGCTCCAAACCTCTG
TTAACGACAGCTCTTTGCAGCAAACCGTACTCAGTAAATCGAGACCGTTA
CCAAAATGAGTCAGCCAACGTTGAAGATACTCAGCACACGGAAGAATATG
TTGCCATGGTGAATACAGCTCATCCCCAGATTTCCCAAATGTTCCAAGAG
GCGTACGATAAAACATCACAATTGTTAAGAGAAGACAAAAAGTTTAGAGT
GACGATCTCACTCAGTGAATCGATCAAGACATGGTTCATTAATAATGTTC
GAATGCCCAATCAAACAGATTCGGTGACTTATGCAACACATTGTGATCTT
TACTTAGTGAACGGTGTTGAGGAACCAACATTTTTCGATCGTTGTTGTGC
ATGTGAAGTGATCACGCAAAAATGCTTCTGGTGTGTTTGCTTCCCGCTGT
TCTTATTGTGTTTTGTACCCTTCCACATCTACAAGAAGTGTGTACTGGGT
GTGGTTGAAAGTTCGATCAAGAGAGTTCAGCCTGTTATTTACCATAATGC
AGTGTTCCAAAATGGTTTCAATATCATGAGTTTACTATGGCCACCTGGCA
CCTCCTTTACTACTGTTGTTAGTACTAGTTACTACCCACCTGGAGTGGTC
CAGCAACAGCCTGGTATGTACCAGCAACAACCAGCAGGGTACCAGCAACA
ACCAGCAGGGTACCAGCAACAACCAGCAGGGTATCAGCAGTCTGCTGGGT
ACCATCAACCTCAATACCAGGGTAATGCACCACCACCTTATCAACAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029537XLOC_029537Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046243-exon-scaffold_108-1491911889:219403..219658TCONS_00046243-exon-scaffold_108-1491911889:219403..219658Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1510915933:219403..219658TCONS_00046243-exon-scaffold_108-1510915933:219403..219658Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1575043694:219403..219658TCONS_00046243-exon-scaffold_108-1575043694:219403..219658Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1491911889:220010..220270TCONS_00046243-exon-scaffold_108-1491911889:220010..220270Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1510915933:220010..220270TCONS_00046243-exon-scaffold_108-1510915933:220010..220270Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1575043694:220010..220270TCONS_00046243-exon-scaffold_108-1575043694:220010..220270Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1491911889:220796..221037TCONS_00046243-exon-scaffold_108-1491911889:220796..221037Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1510915933:220796..221037TCONS_00046243-exon-scaffold_108-1510915933:220796..221037Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1575043694:220796..221037TCONS_00046243-exon-scaffold_108-1575043694:220796..221037Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1491911889:226648..226715TCONS_00046243-exon-scaffold_108-1491911889:226648..226715Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1510915933:226648..226715TCONS_00046243-exon-scaffold_108-1510915933:226648..226715Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1575043694:226648..226715TCONS_00046243-exon-scaffold_108-1575043694:226648..226715Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1491911889:227105..227447TCONS_00046243-exon-scaffold_108-1491911889:227105..227447Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1510915933:227105..227447TCONS_00046243-exon-scaffold_108-1510915933:227105..227447Clytia hemisphaericaexon
TCONS_00046243-exon-scaffold_108-1575043694:227105..227447TCONS_00046243-exon-scaffold_108-1575043694:227105..227447Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046243-proteinTCONS_00046243-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_108supercontigscaffold_108:219403..227447 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.9885	15.0842	4.68159	3.59873	45.454	35.3283	24.1114	26.172	33.2251	34.8736	36.9536	31.3974	31.01	27.5891	40.8359	53.0917	26.8824	32.9791	32.7296	30.6764	31.1965	31.5474	34.8367	34.9812	37.7342	31.7666	23.8932	23.0684	40.8526	37.4059
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046243 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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