TCONS_00046262 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046262
Unique NameTCONS_00046262
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2942

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046262 ID=TCONS_00046262|Name=TCONS_00046262|organism=Clytia hemisphaerica|type=transcript|length=2942bp
CTTGTCATAAAAAACTTAGTAAGATTTATATCTCCAAATATCTTACATAG
GCATTATAAAAAGATAGGATAAGCAGTTTCAAAAATAAGGAGAGATAGAA
TAAGCTAACTGTTGTATCATGAATTCGGTGACGACAAGAGTAATTCGTCT
TCGAAGCGTATATTCACCTCACAAGATTAGCAAATATCTTCAAACAAAAG
GATTGAGAACAAGCTCAACTACATGGTTAAAATATTTGCAAGAGGAGCAG
AAAAAACAGTATGAAGATGATGGATATACCATTGCGAAGAATTTATTGAG
CGAAGAAGAAGTTGACGAAGGAAGAAAAGCACTCCACCAACTCATTGAGC
GAGGTCGTAGTATAACAGATCAAGAAAAGGTTATATACGAGTTCGGCGAG
GGACATTGTTACGACGAGCCGAGAATCCATCGCGTTCGGTTTCCATCACA
ACAACATCAAACATTCGATCATTTTATGAAACATCCAAAATTGTTGGATT
GCATCGAAGATCTGATAGGCCCATCCTTCCGATACATAGCGCAAGACAAA
TTGAACGTCAAACCAGCTGGTCATGGGGCAGCTATACGTTGGCATCAAGA
TTGGGCTTTCTTTCCACATACAAATGATAGTGTACTAACAGCCAGTGTAC
TACTTCACGATGTCACGCGAGAGAACGGTTGTTTACAAATCATTGCTGGT
AGTCACAAAGGACCTGTATTAACACATTTAGCAGAAAATGAGACCAGATT
CGCCAACTCGGTCACTGATCCAAATTTTAAACCTACAAACATTCGGTATT
TAGAAGCGCCTGCCGGAAGCGTGACTTTCCATCATGTCCGAGTAGTTCAC
GGGTCTGCCCGTAATGTGTCCGATAAACCGAGGAGTGTATTGTGCTATAT
CTATAATGCAATGGATGCGTGGCCTTTATTGGGAGTTGGGGATGAACGAT
TTTTAAATATCGGAAGACTTGATTTTGACGCTTTCGATCGGACTAGACTG
AGAGGTGAACGTTGCGTCAGACCGAGGCTAGCGGATGTTCCGGTTGAATT
ACCAGTTCCGTTTGTAGAGTCGTCCGTATTCCAAGCACCTTCGGACATAC
CGGAGCCGGAACCATAAGGAGATaactttatgaaaaatatttcgagaAAA
GATGACCCTTAGAGACACTAGTGACCTTTATCACAAGAACACTTGCCTGT
TTTGACCAACTAATGTAAAAACCCTTACCCTTGCTTTgactttttattgt
ttttgtagCCCTTAGAGAGAGACTAGGAAAAATGAGCAAAACTAATCCTT
AAGGTGCGCACATACCCAGCAACCATTGATTTCAAGAGAGCTGGATCCGA
AACTCGTAGATATTGGAAATGAAGTCACTTGTTTCCTATCTAAAACGCGT
GATCCACGTGGTTTTTACACGAACGCCGAAACACCAAAATACACAAACAC
CAAATTAAAACCAAATTCGTCacacaaaaacagaaaaagagcTAGAATCA
ATCCATGAAATACAGCGCAAATCTTAACGcttcaattattttttgcttga
gaaaggttgaagatccCTCTTTAGCCCCTTCacatagaatgcacccccct
gagcttagggggggggggggtaaaccatttttgcttgattgggacctgta
tttttcaaaaaaaactgggggctagcttgctaggggggataagtgttgtg
taatagaactgggggcagagctgataggttgaagatattttaaatttatt
atatTAAAGATCTATGCTGCGGGGAAGGAATTTATCcctcttgaaaattt
tttccttgcGGCGCAATAAATTTATCGAGAATTtgcatgcaaaatttctt
tgatattttgctttgtgagggcgggggctatgtttctagaatttagccgg
gggctattttccttagcccccCCCTGAAAAATACTGGAGGctagacccct
ctgcacactatgctTCAAGGCTTTAAATTCAATGCAGCATACCATTTTTG
TGACTCTCTCCCTGGCCGGGTAACACCTTAggtaaatacaattttttgga
aatctctaAACGAATATTTTACACACTTTTTTGTACAtataattaaaata
atttacaaataattttattttgtttatattttaagtctttaaaaacaaaa
atagacTAATATTTGAATATTGCTATGAAcggttttttgttttgtttgca
aTCCAACCAAGCGGAACATTGGAAACATAATTAATTCAGAAAGTGTGCAT
ATGTTTCGAATGCGGCCTGTTTCGATATCTGTCTTTAGGTCGACTAAAAC
TTAATTATTTCGaatatttacttgatttttatATAGATTTTTACGTCTAA
TTTTGTTGGAAGAAAGATATACAACATGATTTTAAGGGCGATTGCCTTGG
TGGTAAGCACCACGTTAATTACAGCTATACCTGTCCCACAATTTGCTCCG
CCAATGATGGGCGGTATGGGTATGGATATGGGTTTCAATGGAATGATGAC
CGCCCCTGAGCCGCCATATCAGAAAACACCAAACCATCCAGTTGTATATG
CACCTTTACCAGGAGAGATTGTCTTCAAATTGGTCGAAAAATGGGACGAA
GAATTGACCAATCATGCTTCACCAGATTACCAAATTCTCGAAGGAAACAT
TCGATCAGCTGTACAAAACGCTTTACATGATCCTTATGCACAAGTTACAA
ATATCTACTTCAGAGAAGGACAAGTACCAGGAAACCCACCCTCACGCCCC
AAAGTCGTCGTCCACATGATGGTGAACGGTAAATCAGATGCAGCCTCCCG
ATTGGAGGAGAGTGTCACCCCAGATGGTACCTTGGGTGATGGTCTGAAAG
TATTCAAAGATTCTTTCAACGCTTATTAAAGTTCCGGTAGAGAAGCGAGA
TTGGCTTACAAAAAGCTGAACAGCACGCCAGAAGATGTTTTG
Run BLAST on NCBI

transcript from alignment at scaffold_108:526537..539751+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046262 ID=TCONS_00046262|Name=TCONS_00046262|organism=Clytia hemisphaerica|type=transcript|length=13215bp|location=Sequence derived from alignment at scaffold_108:526537..539751+ (Clytia hemisphaerica)
CTTGTCATAAAAAACTTAGTAAGATTTATATCTCCAAATATCTTACATAG
GCATTATAAAAAGATAGGATAAGCAGTTTCAAAAATAAGGAGAGATAGAA
TAAGCTAACTGTTGTATCATGAATTCGGTGACGACAAGAGTAATTCGTCT
TCGAAGCGTATATTCACCTCACAAGATTAGCAAATATCTTCAAACAAAAG
GATTGAGAACAAGCTCAACTACATGGTTAAAATATTTGCAAGAGGAGCAG
AAAAAACAGGTTTGTTACCTTATAGGCCTTTTTTACGCAGGCCGTtatat
tggcgttatttttcgTCTCTgacgtactctcgggtacctaatagccgggg
gtgggggggggggggatttttgaaaaagaggctaatacagcagaataagG
GAAAATGAGGGAACTGTCAAAagaaatttccccaaaattaataagcaggg
tgggggttggaataagaatgtcctgggtggaaaattttccaaaaactaaT
TACATAAGGGatcagaattttgaaattaggacTGGgctaaaaatggtaaa
aattgtAACCCAATCTCGTACCCAACAGAGAAACTTAGCACAATTTTGGA
TTTTACTAATGGAAGAAGCCAAATCCTTTGACGAGCGCCATCAGAATTAC
TCAATTGGCAACTTTACAACAAAGTTCAtcatagtagagggcattttgta
aaatcgctcgactgttttgttaaaagcacttgttatacatttttggaaag
ctaaggggtaggggaatcgaaattactatgNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttcga
ttcccctaccccttagctttccaaaaatgtataacaagtgcttctaacaa
aacagtcaagcgattccaaaaaatcgaacaaaattccccctactatcaAG
GCTATCACAAAGATATCTCTTCTATCTTTTTACAGTATGAAGATGATGGA
TATACCATTGCGAAGAATTTATTGAGCGAAGAAGAAGTTGACGAAGGAAG
AAAAGCACTCCACCAACTCATTGAGCGGTAAGtgtgtttttttgttaaaa
attctaatttttaaaaaagactGCGACTCATGAGGTTATTGATAAAGATT
TCGTTTTAATGTAGTGTGATATAGAAAAAAGGCGCACAtatatgctgaca
aagcataaATAAACTAAACTGACACGCCAATCGGGATGGAACGGTATCAG
GCGGGagaagtgagcgtaggagttcgGTAAGCATAAGAAAAACATTTGTC
AGCGTTAAGAGCTGAAATTTAATCAGCACTGATGTTCCGTAAGAATCTTT
TACAAGAGTCTTCATTTATTTATTCACTTCTCAGAGGTCGTAGTATAACA
GATCAAGAAAAGGTTATATACGAGTTCGGCGAGGGACATTGTTACGACGA
GCCGAGAATCCATCGCGTTCGGTTTCCATCACAACAACATCAAACATTCG
ATCATTTTATGAAACATCCAAAATTGTTGGATTGCATCGAAGATCTGGTA
AATTCTTTAGGTTATTTCAATCGTCTTATTAAagagtacacccctgtctc
acaacctcGATAAGAAATTTTCCCACTGTCAGGAGTTTGGGATGTAACTT
TTcccttgaatttcaaatggggctagtggggctgaaattataGGGTAATT
TTACAACCTAGAGATTAAATTTTGGCCAACTTTCCAGTGAGGCAGAGGTC
CCAGCGGATCTGTGACTTATTGCACCTCCAAACAAATTAATAGGACACTA
GGGGCTTCAattgtctacccgaaggtaggagaAGGCCTCACTCCTTTTCT
TAGATTCATCACTTACTCTTACAGAGGCATCAAATCAAGTAGTACTTTTA
AATCTTTGGTATCAGGTGGCTATGGATCAAAGCGCACCaaagccggatgc
tctaccctCAAGCTGGAAGCcagtttaagggctctgaccatagtccaaaa
attgattttggtatttgaacataaaagttatatttcaggttttaacaaag
aattgcctttataaattgctttttaattgaatcccttaagagtaattaag
aaattaattgcaaaaatgacgttatgaactttaaaaagatcttNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagatgaaaaattga
tgaaaaaccactattttgaagatttcgagacaaagaagcatttacaaaaa
ttttccgcaaacatttttattgttcggtaaaagatgcACCATCCaatgcg
aaaaatttttcaaaatgttttttcttcgccgaaactaagctcttcaaagt
tgaaatactcttcctcgcaaaagtcttcattttcttcttcaNNagattca
ggaatagtttgtctaactgaaaatgtataacatgccatagttttgttggc
tacatcagtcagaaaacacattttaaacacggcagttatgaaaaattcac
tatggtcagagcccttaaacaaAACTTTCTCTTTTCTAGATAGGCCCATC
CTTCCGATACATAGCGCAAGACAAATTGAACGTCAAACCAGCTGGTCATG
GGGCAGCTATACGTTGGCATCAAGATTGGGCTTTCTTTCCACATACAAAT
GATAGTGTACTAACAGCCAGTGTACTACTTCACGATGTCACGCGAGAGAA
CGGTGAGTAAGGAGTATCGTCAAGTACAAAGCTCAGttaagtctccataa
ctcaaacctctattactcgaacgtCTTCTTAACTCGGACGAATTCGTTGG
CACCGGCCTATTTGAGAAACCCTGAAGTTCAATAGCTGTACCTAAAAACA
AACTACAACAGACTATCGACTGTTTTTCTCAAAGGCTTGAGCTAATGTTT
CAAAATACCCCGCAGAACATACTCGATGGTGCCCCAAACAGCTTTCATCT
CGTCATCATCGAAAGACTACACTGAACATACATACCATATGTGAAGGACG
CTTTAATTCTGAGAATGACACTGGTTTTTACGAGctgtaaaaagtaaaat
atatgTTTTCCATTTAAATATGGCATTTCAACCCTCCAGAACTCTCTCAC
CAAGAGAGTGTAAAAACTACCTAATCTCACTGGACCACGGAAAAGGAGTG
CTTTAAACTTTAAATAATTTGATAATTTGACATTCTCTTTCAGGTTGTTT
ACAAATCATTGCTGGTAGTCACAAAGGACCTGTATTAACACATTTAGCAG
AAAATGAGACCAGATTCGCCAACTCGGTCACTGATCCAAATTTTAAACCT
ACAAACATTCGGTATTTAGAAGCGCCTGCCGGAAGCGTGACTTTCCATCA
TGTCCGAGTAGTTCACGGGTCTGCCCGTAATGTGTCCGATAAACCGAGGA
GTGTATTGTGCTATATCTATAATGCAATGGATGCGTGGCCTTTATTGGGA
GTTGGGGATGAACGATTTTTAAATATCGGAAGACTTGATTTTGACGCTTT
CGATCGGACTAGACTGAGAGGTGAACGTTGCGTCAGACCGAGGCTAGCGG
ATGTTCCGGTTGAATTACCAGTTCCGTTTGTAGAGTCGTCCGTATTCCAA
GCACCTTCGGACATACCGGAGCCGGAACCATAAGGAGATaactttatgaa
aaatatttcgagaAAAGATGACCCTTAGAGACACTAGTGACCTTTATCAC
AAGAACACTTGCCTGTTTTGACCAACTAATGTAAAAACCCTTACCCTTGC
TTTgactttttattgtttttgtagCCCTTAGAGAGAGACTAGGAAAAATG
AGCAAAACTAATCCTTAAGGTGCGCACATACCCAGCAACCATTGATTTCA
AGAGAGCTGGATCCGAAACTCGTAGATATTGGAAATGAAGTCACTTGTTT
CCTATCTAAAACGCGTGATCCACGTGGTTTTTACACGAACGCCGAAACAC
CAAAATACACAAACACCAAATTAAAACCAAATTCGTCacacaaaaacaga
aaaagagcTAGAATCAATCCATGAAATACAGCGCAAATCTTAACGcttca
attattttttgcttgagaaaggttgaagatccCTCTTTAGCCCCTTCaca
tagaatgcacccccctgagcttagggggggggggggtaaaccatttttgc
ttgattgggacctgtatttttcaaaaaaaactgggggctagcttgctagg
ggggataagtgttgtgtaatagaactgggggcagagctgataggttgaag
atattttaaatttattatatTAAAGATCTATGCTGCGGGGAAGGAATTTA
TCcctcttgaaaattttttccttgcGGCGCAATAAATTTATCGAGAATTt
gcatgcaaaatttctttgatattttgctttgtgagggcgggggctatgtt
tctagaatttagccgggggctattttccttagcccccCCCTGAAAAATAC
TGGAGGctagacccctctgcacactatgctTCAAGGCTTTAAATTCAATG
CAGCATACCATTTTTGTGACTCTCTCCCTGGCCGGGTAACACCTTAggta
aatacaattttttggaaatctctaAACGAATATTTTACACACTTTTTTGT
ACAtataattaaaataatttacaaataattttattttgtttatattttaa
gtctttaaaaacaaaaatagacTAATATTTGAATATTGCTATGAAcggtt
ttttgttttgtttgcaaTCCAACCAAGCGGAACATTGGAAACATAATTAA
TTCAGAAAGTGTGCATATGTTTCGAATGCGGCCTGTTTCGATATCTGTCT
TTAGGTCGACTAAAACTTAATTATTTCGaatatttacttgatttttatAT
AGATTTTTACGTCTAATTTTGTTGGAAGAAAGGTAACACGATTTTGTAGC
atcgtttttcttttattacatgTATATAATTGCTCGGTCAGATTCTGGCA
ACTTTAAAAATGTATTCTTAGTCTGAAAAGACCAAAAAGTTACGAGCAAT
CTTGCCTTGATACCTGACTAATTGCTTCTACTGAAGTAGTGAAACAGAGG
TTCGGGGTCTTAAATTTGCGGGAatgacattttcaggctttcttcttcat
ctaatcggatatttcgatttgggaaGGGGTATAATGGCTTCCtggctaca
cgcttttttcataagaataatgcactttggctgagggtgagcatttttct
tattgttctaaacaataggcctattgttctaactcCGAANCGAGGGTGAG
CATTTTTCTTATTGTTCTAactccgaaatctcaccctgatattcttattg
AAAAGCGTGTATATTCTCAGCCTAGTGGGACATTCACAAAAACTTTTGAG
TCCTCAGCTCCTAAGTttctaagttttaagtctcGGGTTAATGCTCATAG
ttaaaacttttcaattctAAGTTAAGGCACTTAAAAACTACTTGCAGTTT
TAACAATTTGCTGGGAATTTCCCTTAAGCCAAATTTTATAGCCATCATTG
TAGTACACAACACTTTGAAACGTTCATAAGATAAGAGCTACATATGTAAA
ATCATCTCTTTTTGACTTATAGATATACAACATGATTTTAAGGGCGATTG
CCTTGGTGGTAAGCACCACGTTAATTACAGGTAagcaaatgcaaaatttc
atattagaaaagttatattttagcaATATTgtagaaatatatttttagat
tttttaaacgaTTTTTAGGTTTCAAAGTCAGGCGATTTCAGCATTTCCAT
TTTAGAGGGGTTTAGTGACTCTCCAGCTATATTCCAGTTTTATGGCAACA
TTTTTAAGTATTGGAATCCTAAAAACCTAAGTTTGTAAGTCTTAAGTCTT
TTAAAAATCATTcgtggttttgattttttttcttcaaaatagtagggggc
caatcCTTATGATCCGTAGCATCTTTCGTGGGACTAAACCGCGtgtgatt
ggttcgaaagtaTATAGGATTTTAAAAGTCGAATTCAACCAAATTGATTA
AAATCATCGGAcggagcatgaaattctgagcaaaaaagtatactacaaCA
TTCTTATACTCAAACACACAAACAAATATGACGAtttaagggagtggtca
gaaagtatcatAACTAAGGGGGGGGGTGGCGGGTTTTAGGGgtgtcaaaa
tttttagaatgtGAAGGTGCCTGTAGttattttgacctttttatggctac
ttttgacctttttaaggcCTCGTTTAAGCTGTTTGACTTTTCTTagatca
aaattttcaaggctttttttagCTATTATTGTAGcttcaaatcatttttt
tttttcaaatcgttTTGAGAGgtcaaagaacattttaagtggCCTATATT
AGGAAAATATATTGACTGGTTAGCCCCCCCGGGCTTGAATTCTTTTTGAG
AATATGAAGGAAGGGGGtgcgaattttttttcgatttttcgaaaatatcc
tccaccccacccTAGTAGTAGTAtttactttctgaccactccctaaagTT
CAAAATCCTGTGGAATCTGTTACGTTTTAGATGAAATTCGACGTCAATCA
TACTCTAAGTGAGAGAATTTTGAACTTCGAAAGCCTGTATTTCTTTTCAT
GTTTGAGTACAAGGCTTGTACTTGCTATATATTCGATGGTATTGGTCATT
TTCGTCTATTTTGGGGGTTAGGAATTTTGCTCACAACTTAGTTTTTTTGC
CATTAAAAACTCTTACCACGCTTAATTCGCAGGCCCCTCTAAAAAAGTTT
CATAATCCTAtctactttcgaaccaatcacatgcgGAAAGATGCTACAGA
TCTTTTCCCACAGCgggaataaaaatttctatcagaatcccaatggggat
agaaattttattgctcCAAGGCTAACAATATCTAGTGGGGATTGTTTTGG
AGTGCATTTTTTTAcactgaatttcgaatggggatgaaatcatcaaaatc
aatttccaggtagggctgaaattttgggcaaattttccAATGAGCTGGGG
TTCccctgtgacacaggggtgtcataaaaaacaactttttgtattGACAT
TATTGCAAAAAAGGGTGCTCACTTCAAtcgattttaattttaattttcac
agCTATACCTGTCCCACAATTTGCTCCGCCAATGATGGGCGGTATGGGTA
TGGATATGGGTTTCAATGGAATGATGACCGCCCCTGAGCCGCCATATCAG
AAAACACCAAACCATCCAGTTGTATATGCACCTTTACCAGGTAccaagat
ttttttataagaacaaaatatataaaaaatagaagGCTTAGGTGGCCAAA
ATCTAAAGAATGTACAAATAGTGGAGAAAACATCACCCATATtacccgat
gatgggagaagaatctctcgaaacctAGCCAAACGGAAATCTCGtcatcc
aagccacgataaatttccaattcatgatattccatgacgtaatgttttct
acggaaagacccggtttttgccagtaccTTTTACATTACGCCATAGTATC
ATGAATatgaacatttttttcatttagttcTCTAATTATTGATTCTACCT
TTATCGTTCTTGTTCTGTTCATAGTGACCCTTGGTGGAAacaaaatgggc
cattccattttatatccatacaggcaGGTGggcgaacatttccagggggt
attcggaaaataattttcagagGGTATAACGGagtatttttccattttcc
aggaGGTGAAagtttattctaaaatttctaggggtaaaagactgatttta
gtttgtCCACCCTTACTTTTAAGGTATATAAAGAATTTTCCCAAGGGTTC
TTATGtatattttgccatttttcagggggtatCCAAATATTTCTAAGAAT
CtttatttgccttaaaaagTTTCGTCTACCCCCTGTACGGAAATTTAATG
GGACATCCCaattcttcccttaaggtaatccGTTGAAACTTCTGTCTCTT
CTTTTCAGGAGAGATTGTCTTCAAATTGGTCGAAAAATGGGACGAAGAAT
TGACCAATCATGCTTCACCAGATTACCAAATTCTCGAAGGAAACATTCGA
TCAGCTGTAAGTTGAAGTTAAAAGTTTTACTCATCATTttgattcacaag
ctttttcacattgaagtGACATGGATGTGGACTAAGATTGGCCAGAGAGA
GGGAagaaaaagagttttttattcGATCAGCTGTAAGCTTATggttttac
ataagtgttcccgtttcatatcaaacaCATGGTTTATATCGGGGACATAT
AAGGGCGCCTTTgggaattttttagaaaaaagagctTGGGAAATGTAAAA
AGTTGATAATATTTTCTATGTGACAGGTACAAAACGCTTTACATGATCCT
TATGCACAAGTTACAAATATCTACTTCAGGTAAGCAGCATTTTTAAGCTT
TTCTAAGCTAAAAGTACAgctttttttcaaatcataGTCACTACAATAAA
TGCTCAAAGATGTAATGCAGGAGGTTTAAACAACGGTTTTCGTGATGACA
TGATTGTCCTTTTTTCAAGTTCGNTAAAGTTCAAAATCCTGTGGAATCTG
TTACGTTTTAGATGAAATTCGACGTCAATCATACTCTAAGTGAGAGAATT
TTGAACTTCGAAAGCCTGTATTTCTTTTCATGTTTGAGTACAAGGCTTGT
ACTTGCTATATATTCGATGGTATTGGTCATTTTCGTCTATTTTGGGGGTT
AGGAATTTTGCTCACAACTTAGTTTTTTTGCCATTAAAAACTCTTACCAC
GCTTAATTCGCAGGCCCCTCTAAAAAAGTTTCATAATCCTAtctactttc
gaaccaatcacatgcgGAAAGATGCTACAGATCTTTTCCCACAGCgggaa
taaaaatttctatcagaatcccaatggggatagaaattttattgctcCAA
GGCTAACAATATCTAGTGGGGATTGTTTTGGAGTGCATTTTTTTAcactg
aatttcgaatggggatgaaatcatcaaaatcaatttccaggtagggctga
aattttgggcaaattttccAATGAGCTGGGGTTCccctgtgacacagggg
tgtcataaaaaacaactttttgtattGACATTATTGCAAAAAAGGGTGCT
CACTTCAAtcgattttaattttaattttcacagCTATACCTGTCCCACAA
TTTGCTCCGCCAATGATGGGCGGTATGGGTATGGATATGGGTTTCAATGG
AATGATGACCGCCCCTGAGCCGCCATATCAGAAAACACCAAACCATCCAG
TTGTATATGCACCTTTACCAGGTAccaagatttttttataagaacaaaat
atataaaaaatagaagGCTTAGGTGGCCAAAATCTAAAGAATGTACAAAT
AGTGGAGAAAACATCACCCATATtacccgatgatgggagaagaatctctc
gaaacctAGCCAAACGGAAATCTCGtcatccaagccacgataaatttcca
attcatgatattccaTGACGTAATGTAAAACGGAAAgacccggtttttgc
cagtaccTTTTACATTACGCCATGAATATTATGAATatgaacattttttt
catttagttcTCCAATTATTGATTCTTCCTTTATCGTTCTTGTTCTGTTC
ATAGTGACCCTTGGTGGAAacaaaatgggccattccattttatatccata
caggcaggtggacgaacatttccagggggtattcggaaaataattttcag
ggGGTATAACGGagtatttttccattttccaggaGGTGAgtattctaaaa
tttctaggggtaaaagactgattttagtttgtccacccttacttttaagg
tatataaagaatttttccaagggttcttatgtatattttgccatttttca
gggggtatccaaatatttataagaatctttatttgccttaaaaagTTTCG
TCTACCCCCTGTACGGAAATTTAATGGGACATCCCaattcttcccttaag
gtaatccGTTGAAACTTCTGTCTCTTCTTTTCAGGAGAGATTGTCTTCAA
ATTGGTCGAAAAATGGGACGAAGAATTGACCAATCATGCTTCACCAGATT
ACCAAATTCTCGAAGGAAACATTCGATCAGCTGTAAGTTGAAGTTAAAAG
TTTTACTCATCATTttgattcacaagctttttcacattgaagtGACATGG
ATGTGGACTAAGATTGGCCAGAGAGAGGGAagaaaaagagttttttattc
GATCAGCTGTAAGCTTATggttttacataagtgttcccgtttcatatcaa
acaCATGGTTTATATCGGGGACATATAAGGGCGCCTTTgggaatatttta
gaaaaaagagctTGGGAAATGTAAAAAGTTGATAATATTTTCTATGTGAC
AGGTACAAAACGCTTTACATGATCCTTATGCACAAGTTACAAATATCTAC
TTCAGGTAAGCAGCATTTTTAAGCTTTTCTAAGCTAAAAGTACAgctttt
tttcaaatcataGTCACTACAATAAATGCTCAAAGATGTAATGCAGGNGG
CCTTTTCAAATCATAGTCACTACAATAAATGCTCAAAGATGTAATGCAGG
AGGTTTAAacagcggttttcgtgatgacaTGATTGTCCTTTTTTCAAgtt
cgtgatttcgtgatttaagattttaaagtgtgTGATTGCATGATCAACAA
ACGTgatcaacgtgatcgtgatagaaaggAAATTCAACTCGTCGTAACGT
GAtttgtaattttcttttatgtgattgcgtgatttgaaaggtgactgggG
GCCTCTTTAAACTTGAGCTACTTCCTACCTTTAAAGGACATTAGTAcaaa
ctaccttatcggggaaaatttcgtcggggaaaagtgacgaaattttagac
aagtgacgaatattttccccgacgaaaattttccccggccttaatgcgtt
Ngacaagtgacgaatattttccccgacgaaaattttcaccgacgaagttt
tccccgataaggtattcaatTGCTCGTGAtgtaaagacttttttatataC
TATACTATCAATTTATAGAGAAGGACAAGTACCAGGAAACCCACCCTCAC
GCCCCAAAGTCGTCGTCCACATGATGGTGAACGGTAAATCAGATGCAGCC
TCCCGATTGGAGGAGAGTGTCACCCCAGATGGTACCTTGGGTGATGGTCT
GAAAGTATTCAAAGATTCTTTCAACGCTTATTAAAGTTCCGGTAGAGAAG
CGAGATTGGCTTACAAAAAGGTAAATATAGCagactctctttaattcgaa
cctctttaactcgaatgccCCCTCAACTCCAAAGTTTTATAGTTCCTTCA
GTTGAAAATGACATGACCGGATTTTTTTTCACTCCATAGCTataaatttc
cttaactcgaacaaattgaTTCCCGTGcgagttcgagttatggagtctCC
ATTGTATGATTCAATTGGtctattccagaaaaaacttcttttttggGAAA
GGTCACCCCTGGAtttgttttcaacttttcaggaccccccttggattttt
ttttttggaccgccctggatttttacactcgaaaaacccAACCCCctaga
ttttctatttttcagatcaCCTTGGACGTTACATCTCCTCAACAtaaggg
ggtacagactatttctggaatagcctatTTGGATTTCCCTTTAAAGGAAA
GCCCCTTTCAAGTCAATAGGTGAATAAAGAAAGCAAATTAAGGAGATTTA
AGCTCGGAACTTACGAAAAACAAGAAAAGCCGAGAATAAGCTAAATtcat
tggttcttataaaaaacgtgcaatttTTCTATGTTTGAGTGACATAGGAT
GTTTTATCACATTGCATCTTAAACAGCAAATTAATCGCAAGATGATTACA
TTTCACGTATTATTCTGGTCATTGCCTTACTCTATCTACAAAATAATTAT
ACAAATTGAAATAAAGTTTTACTATTTTCCTCTTTCAGCTGAACAGCACG
CCAGAAGATGTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029547XLOC_029547Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046262-exon-scaffold_108-1491911889:526537..526795TCONS_00046262-exon-scaffold_108-1491911889:526537..526795Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:526537..526795TCONS_00046262-exon-scaffold_108-1510915933:526537..526795Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:526537..526795TCONS_00046262-exon-scaffold_108-1575043694:526537..526795Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:528322..528413TCONS_00046262-exon-scaffold_108-1491911889:528322..528413Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:528322..528413TCONS_00046262-exon-scaffold_108-1510915933:528322..528413Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:528322..528413TCONS_00046262-exon-scaffold_108-1575043694:528322..528413Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:528721..528883TCONS_00046262-exon-scaffold_108-1491911889:528721..528883Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:528721..528883TCONS_00046262-exon-scaffold_108-1510915933:528721..528883Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:528721..528883TCONS_00046262-exon-scaffold_108-1575043694:528721..528883Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:530326..530488TCONS_00046262-exon-scaffold_108-1491911889:530326..530488Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:530326..530488TCONS_00046262-exon-scaffold_108-1510915933:530326..530488Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:530326..530488TCONS_00046262-exon-scaffold_108-1575043694:530326..530488Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:530980..532668TCONS_00046262-exon-scaffold_108-1491911889:530980..532668Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:530980..532668TCONS_00046262-exon-scaffold_108-1510915933:530980..532668Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:530980..532668TCONS_00046262-exon-scaffold_108-1575043694:530980..532668Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:533359..533416TCONS_00046262-exon-scaffold_108-1491911889:533359..533416Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:533359..533416TCONS_00046262-exon-scaffold_108-1510915933:533359..533416Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:533359..533416TCONS_00046262-exon-scaffold_108-1575043694:533359..533416Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:534889..535026TCONS_00046262-exon-scaffold_108-1491911889:534889..535026Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:534889..535026TCONS_00046262-exon-scaffold_108-1510915933:534889..535026Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:534889..535026TCONS_00046262-exon-scaffold_108-1575043694:534889..535026Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:535745..535842TCONS_00046262-exon-scaffold_108-1491911889:535745..535842Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:535745..535842TCONS_00046262-exon-scaffold_108-1510915933:535745..535842Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:535745..535842TCONS_00046262-exon-scaffold_108-1575043694:535745..535842Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:536113..536165TCONS_00046262-exon-scaffold_108-1491911889:536113..536165Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:536113..536165TCONS_00046262-exon-scaffold_108-1510915933:536113..536165Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:536113..536165TCONS_00046262-exon-scaffold_108-1575043694:536113..536165Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:538805..539006TCONS_00046262-exon-scaffold_108-1491911889:538805..539006Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:538805..539006TCONS_00046262-exon-scaffold_108-1510915933:538805..539006Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:538805..539006TCONS_00046262-exon-scaffold_108-1575043694:538805..539006Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1491911889:539725..539751TCONS_00046262-exon-scaffold_108-1491911889:539725..539751Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1510915933:539725..539751TCONS_00046262-exon-scaffold_108-1510915933:539725..539751Clytia hemisphaericaexon
TCONS_00046262-exon-scaffold_108-1575043694:539725..539751TCONS_00046262-exon-scaffold_108-1575043694:539725..539751Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_108supercontigscaffold_108:526537..539751 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0304764	0.0395455	0	0.18453	0.285175	0.512755	8.68104	10.4326	3.30108	3.14039	3.88858	3.50764	5.82366	5.54498	3.06419	6.6728	4.82885	5.61764	3.04118	2.74835	3.33944	2.99359	2.02822	2.70357	21.4666	25.3077	0.604901	0.396009	6.28386	5.0463
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046262 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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