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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046274 ID=TCONS_00046274|Name=TCONS_00046274|organism=Clytia hemisphaerica|type=transcript|length=3823bp
ataagcataatgATATACCTGGATGTGTTGAAAGCATtctcgagcctgac
caaggggcatacacttgcttataataAAACATGTAACCAAACAggtctat
tttctgaaaaaaatgttgcgcgctgacagcttgaaaatttaaaattttgc
acgCTCGAAAGGTTAGTTTGATCaggtttgatttttcaaaatttcatagg
AGTACAGAAACTTCATCTAAAgaatttatattattttcatatcTGGCACC
TTGTACTAGTTAGTAGGCAAAATGATAAATTAcaatctctttttttttaa
tccagGTTTAATACtgcaataaataaataaaatagataaaaaaaaaattg
gttatGAAAAAGGATTTAGAAAGTGGTGAAAAGGGAGCAGACGCGATGGT
GCAAAACAAGACTTCATCAAACATGAAATATTGGAGTTTGGTCATCCTCA
TCTTCCAAAACGCATCACTCATTTTGACCATCAGATACTCCAGAACATTA
AGTGGTGACATGTATATATCCAGCACTGCTGTTGTCTTTGCTGAGCTTTT
GAAAGTTCTCGTTTGTTTGGTGTTAACATACAATGAAGTGAAGGATGTGA
ATCGTTGGTTGAATATGCTTTACACCAACATTATCGGTGATCCACTAACG
ACCTTGAAAGTTGCCGTCCCTTCTCTGGTCTATGTCATCCAAAACAATTT
ACAATACGTTGCTATATCTAATCTGGATGCTGCCACATTCCAAGTAACGT
ACCAATTGAAAGTTTTGACCACTGCTCTCTTCTCTGTTTTCATGCTTGGC
AAGAAGCTCTCGTCTAAACAATGGGTTTCCCTTTTCATGTTATTTGTCGG
TATTGCCATGGTACAATTACAACCTAGCATGCTCCAAGCCAAGAAAACTG
AAGTATCTGGACAAAACCCCTACGTTGGATTCATAGCTGTTTTAGTATCC
AGTTTATGTTCTGGATTTGCTGGTGTTTATTTCGAGAAGATTTTGAAGGG
TAGTGGAAAGGGTCCAGCTGGTAGTGTCTGGTTACGTAATATCCAGATGG
GATCCGTTGGCGTCCTTCTTGGAATAGGAGGTATGATGGTTAGCGATTAC
TCCAAGATCCAAGAGAAAGGTGTTTTCTTTGGATACACTTTATTGGTTTG
GATTATCATCTTAATGCAAGCTTTTGGTGGCTTGTTAGTAGCAGTCGTTG
TCAAGTATGCAGACAACATTCTGAAGGGTTTTGCTACATCCTTTGCGATA
ATTGTCTCCTGTATTGTTTCAATTTATTTGTTCAATTTCATACTGAGCAT
TCAATTTGTTTTGGGAACTGTTTTAGTCATGACTGCTATTTATTTGTACA
GTCAATAGAAATATTGTTTCCTGTCATCTTTATAAAAGCGGCGCCTGTCG
AACTATCGCCTTATacgcccctgtctcacagcttcCGTGGATTTTTTCCT
CCCGCCTGTAGGATTTCTGTCAAAATCCCgaaggggataaaaattctatt
gttccaagcctaCAATTCCAGCGAGTTGGGactccaccgggtctgtgaca
cagtgTTGTCCTTATGGcctttttaaattgaaaaatcgagTCTCCTTTct
gtttaaaacattttaacctcgaaatttttatttccgatttcaaattttag
ttgaaACTTATAGAAATAGaacagaaaaataacaaaatggcAAAGAAAAC
TGCATCAATTcgggattttgaaaaataactttattAGACACCCTAGCAAT
TTGAAAGGCTGACAAGATCCATTCCTATATTTTTATACtttattatttta
atatttaagCGAATAAATAATAATATATGCATCATTATGTCATGAAGAAT
AGATATTATCTTTAAGGTGGTGTTTGTAATTTTAGCCGAACGTTTTCAGG
TTTTTTAACCAATTTATTCGTTCGGGGCCCATTTTTGATTTGATGCttaa
gatattttgaaaatagttaCATTTTCTTGTAATTAGAATAATACTAATTA
TCATCGACATGAAAAATATAAGCAGTCTGAAAATTggcataaatgctgta
tttcatattgtgcCCTGCAAATACAAGACTGCGTTTATAAAAGGGGTCTG
GTAAGCGAGATATCGTATTTTGAACTTGTTGTATCTTTTACCGAAATTTA
TTCCCAGAAATGTTTTCGTTTTCCTCTCAAAAATGGTCAAAATAAGAGTG
TTTTGACATTTCCATGATATGAGCATTCGAAACAGAATCTAAAAGCATAG
AGAAGACAAACGAGAGAAAGTTGTTTGTTGATATATTTTTCAAGTCGATG
ATAAACCAGTTATCACACTTTCACTCGTACAGTAGTGGATATAAGGCGAG
GAAGATATAGAAAACTCTGAACGAGAAAAATATATACCATATTGTACTCT
GTACCGTGTGATAAATATTACGTAGCCCATGTCTCCGAGTTTTAACAGGC
CATTATACGTATtgttaataaatattttgaattaattttaaaatgGAATT
TGGTTAATAGATAGgtacatagtataagaaagccgcggctggaatatgta
ccgcgttgtcttttcagttattgctgttccatctctgtctccgagcttta
taagaacatcaagatgctcagtttattattggtagatagtttttgaaatt
tttctcttattttccttcacaaaaagttttgttgttgttagatatctttg
aatctgtatcCATTAGAACACCTGAACttattttggacatattttagggg
tattttgtggaaacaatagtttttcgattaattgaaattataagaactat
tttCAAGATGACAANCCAAGAGAAAGGTGTTTTCTTTGGATACACTTTAT
TGGTTTGGATTATCATCTTAATGCAAGCTTTTGGTGGCTTGTTAGTAGCA
GTCGTTGTCAAGTATGCAGACAACATTCTGAAGGGTTTTGCTACATCCTT
TGCGATAATTGTCTCCTGTATTGTTTCAATTTATTTGTTCAATTTCATAC
TGAGCATTCAATTTGTTTTGGGAACTGTTTTAGTCATGACTGCTATTTAT
TTGTACAGTCAATAGAAATATTGTTTCCTGTCATCTTTATAAAAGCGGCG
CCTGTCGAACTATCGCCTTATacgcccctgtctcacagcttcCGTGGATT
TTTTCCTCCCGCCTGTAGGATTTCTGTCAAAATCTCgaaggggataaaaa
ttctattgttccaagcccaCAATTCCAGCGAGTTGGGactccaccgggtc
tgtgacacagtgTTGTCCTTATGGCCTTTTTAAATTGGAAAATCGAGTTT
CCTTTctgtttaaaacattttaacctcgaaatttttatttctgatttcaa
attttagttgaaACTTATAGAAATAGaacagaaaaataacaaaatggcAA
AGAAAACTGCATCAATTcgggattttgaaaaataactttattAGACACCC
TAGCAATTTGAAAGGCTGACAAGATCCATTCCTATATTTTTATACtttat
tattttaatatttaagCGAATAAATAATAATATATGCATCATTATGTCAT
GAAGAATAGATATTATCTTNCATTATAacattctctttttttttaagttt
tttttatagcaatgaaataggttttttattcaaaacttcTAGGTGACCTT
AAAtttcaagttgataaaagtttatAGATGAGACAAACAAACTAAATACA
AACATTACGCTATGAGTATCTTTTCTATTTCTATCGTCAGATAATAAGTC
TAGAAGgttttcataaaatatttttaactttaattAATATTTATTCATGC
TAAAATTTTTCAATAGTTTCGTT Run BLAST on NCBI protein sequence of TCONS_00046274-protein >TCONS_00046274-protein ID=TCONS_00046274-protein|Name=TCONS_00046274-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MKKDLESGEKGADAMVQNKTSSNMKYWSLVILIFQNASLILTIRYSRTLS
GDMYISSTAVVFAELLKVLVCLVLTYNEVKDVNRWLNMLYTNIIGDPLTT
LKVAVPSLVYVIQNNLQYVAISNLDAATFQVTYQLKVLTTALFSVFMLGK
KLSSKQWVSLFMLFVGIAMVQLQPSMLQAKKTEVSGQNPYVGFIAVLVSS
LCSGFAGVYFEKILKGSGKGPAGSVWLRNIQMGSVGVLLGIGGMMVSDYS
KIQEKGVFFGYTLLVWIIILMQAFGGLLVAVVVKYADNILKGFATSFAII
VSCIVSIYLFNFILSIQFVLGTVLVMTAIYLYSQ Run BLAST on NCBI transcript from alignment at scaffold_108:191669..195814- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046274 ID=TCONS_00046274|Name=TCONS_00046274|organism=Clytia hemisphaerica|type=transcript|length=4146bp|location=Sequence derived from alignment at scaffold_108:191669..195814- (Clytia hemisphaerica)
ATAAGCATAATGATATACCTGGATGTGTTGAAAGCATTCTCGAGCCTGAC
CAAGGGGCATACACTTGCTTATAATAAAACATGTAACCAAACAGGTCTAT
TTTCTGAAAAAAATGTTGCGCGCTGACAGCTTGAAAATTTAAAATTTTGC
ACGCTCGAAAGGTTAGTTTGATCAGGTTTGATTTTTCAAAATTTCATAGG
AGTACAGAAACTTCATCTAAAGAATTTATATTATTTTCATATCTGGCACC
TTGTACTAGTTAGTAGGCAAAATGATAAATTACAATCTCTTTTTTTTTAA
TCCAGGTTTAATACTGCAATAAATAAATAAAATAGATAAAAAAAAAATTG
GTTATGAAAAAGGATTTAGAAAGTGGTGAAAAGGGAGCAGACGCGATGGT
GCAAAACAAGACTTCATCAAACATGAAATATTGGAGTTTGGTCATCCTCA
TCTTCCAAAACGCATCACTCATTTTGACCATCAGATACTCCAGAACATTA
AGTGGTGACATGTATATATCCAGCACTGCTGTTGTCTTTGCTGAGGTATG
TTTCAAATTTAATGCCATGCACTTTTCTTTTAAAGAATACTTCACTTTTT
AGATTTTAAATTGATTTAGGACCAAAAAACCTCGAAAATGCGAACTCATG
GCTACATCTCTGGTCATCTAGAAATCGATCGGCAGCTTGCGCAAATCTGA
GCAGCGTGTAGTCTCAAAGCCTTCAGGCTTTCTCGTTATAAGCTAGACTT
ATATACTTGAAATTATCCCGGTGAATTCTAGACTCTAAATGATGATACTT
TAAATAAGAACCGAGAAAGTAGAAGCTAACATAATTTTGTATCATTTTTC
ATCATCCTTGTTTTTCAGCTTTTGAAAGTTCTCGTTTGTTTGGTGTTAAC
ATACAATGAAGTGAAGGATGTGAATCGTTGGTTGAATATGCTTTACACCA
ACATTATCGGTGATCCACTAACGACCTTGAAAGTTGCCGTCCCTTCTCTG
GTCTATGTCATCCAAAACAATTTACAATACGTTGCTATATCTAATCTGGA
TGCTGCCACATTCCAAGTAACGTACCAATTGAAAGTTTTGACCACTGCTC
TCTTCTCTGTTTTCATGCTTGGCAAGAAGCTCTCGTCTAAACAATGGGTT
TCCCTTTTCATGTTATTTGTCGGTATTGCCATGGTACAATTACAACCTAG
CATGCTCCAAGCCAAGAAAACTGAAGTATCTGGACAAAACCCCTACGTTG
GATTCATAGCTGTTTTAGTATCCAGTTTATGTTCTGGATTTGCTGGTGTT
TATTTCGAGAAGATTTTGAAGGGTAGTGGAAAGGGTCCAGCTGGTAGTGT
CTGGTTACGTAATATCCAGATGGGATCCGTTGGCGTCCTTCTTGGAATAG
GAGGTATGATGGTTAGCGATTACTCCAAGATCCAAGAGAAAGGTGTTTTC
TTTGGATACACTTTATTGGTTTGGATTATCATCTTAATGCAAGCTTTTGG
TGGCTTGTTAGTAGCAGTCGTTGTCAAGTATGCAGACAACATTCTGAAGG
GTTTTGCTACATCCTTTGCGATAATTGTCTCCTGTATTGTTTCAATTTAT
TTGTTCAATTTCATACTGAGCATTCAATTTGTTTTGGGAACTGTTTTAGT
CATGACTGCTATTTATTTGTACAGTCAATAGAAATATTGTTTCCTGTCAT
CTTTATAAAAGCGGCGCCTGTCGAACTATCGCCTTATACGCCCCTGTCTC
ACAGCTTCCGTGGATTTTTTCCTCCCGCCTGTAGGATTTCTGTCAAAATC
CCGAAGGGGATAAAAATTCTATTGTTCCAAGCCTACAATTCCAGCGAGTT
GGGACTCCACCGGGTCTGTGACACAGTGTTGTCCTTATGGCCTTTTTAAA
TTGAAAAATCGAGTCTCCTTTCTGTTTAAAACATTTTAACCTCGAAATTT
TTATTTCCGATTTCAAATTTTAGTTGAAACTTATAGAAATAGAACAGAAA
AATAACAAAATGGCAAAGAAAACTGCATCAATTCGGGATTTTGAAAAATA
ACTTTATTAGACACCCTAGCAATTTGAAAGGCTGACAAGATCCATTCCTA
TATTTTTATACTTTATTATTTTAATATTTAAGCGAATAAATAATAATATA
TGCATCATTATGTCATGAAGAATAGATATTATCTTTAAGGTGGTGTTTGT
AATTTTAGCCGAACGTTTTCAGGTTTTTTAACCAATTTATTCGTTCGGGG
CCCATTTTTGATTTGATGCTTAAGATATTTTGAAAATAGTTACATTTTCT
TGTAATTAGAATAATACTAATTATCATCGACATGAAAAATATAAGCAGTC
TGAAAATTGGCATAAATGCTGTATTTCATATTGTGCCCTGCAAATACAAG
ACTGCGTTTATAAAAGGGGTCTGGTAAGCGAGATATCGTATTTTGAACTT
GTTGTATCTTTTACCGAAATTTATTCCCAGAAATGTTTTCGTTTTCCTCT
CAAAAATGGTCAAAATAAGAGTGTTTTGACATTTCCATGATATGAGCATT
CGAAACAGAATCTAAAAGCATAGAGAAGACAAACGAGAGAAAGTTGTTTG
TTGATATATTTTTCAAGTCGATGATAAACCAGTTATCACACTTTCACTCG
TACAGTAGTGGATATAAGGCGAGGAAGATATAGAAAACTCTGAACGAGAA
AAATATATACCATATTGTACTCTGTACCGTGTGATAAATATTACGTAGCC
CATGTCTCCGAGTTTTAACAGGCCATTATACGTATTGTTAATAAATATTT
TGAATTAATTTTAAAATGGAATTTGGTTAATAGATAGGTACATAGTATAA
GAAAGCCGCGGCTGGAATATGTACCGCGTTGTCTTTTCAGTTATTGCTGT
TCCATCTCTGTCTCCGAGCTTTATAAGAACATCAAGATGCTCAGTTTATT
ATTGGTAGATAGTTTTTGAAATTTTTCTCTTATTTTCCTTCACAAAAAGT
TTTGTTGTTGTTAGATATCTTTGAATCTGTATCCATTAGAACACCTGAAC
TTATTTTGGACATATTTTAGGGGTATTTTGTGGAAACAATAGTTTTTCGA
TTAATTGAAATTATAAGAACTATTTTCAAGATGACAANCCAAGAGAAAGG
TGTTTTCTTTGGATACACTTTATTGGTTTGGATTATCATCTTAATGCAAG
CTTTTGGTGGCTTGTTAGTAGCAGTCGTTGTCAAGTATGCAGACAACATT
CTGAAGGGTTTTGCTACATCCTTTGCGATAATTGTCTCCTGTATTGTTTC
AATTTATTTGTTCAATTTCATACTGAGCATTCAATTTGTTTTGGGAACTG
TTTTAGTCATGACTGCTATTTATTTGTACAGTCAATAGAAATATTGTTTC
CTGTCATCTTTATAAAAGCGGCGCCTGTCGAACTATCGCCTTATACGCCC
CTGTCTCACAGCTTCCGTGGATTTTTTCCTCCCGCCTGTAGGATTTCTGT
CAAAATCTCGAAGGGGATAAAAATTCTATTGTTCCAAGCCCACAATTCCA
GCGAGTTGGGACTCCACCGGGTCTGTGACACAGTGTTGTCCTTATGGCCT
TTTTAAATTGGAAAATCGAGTTTCCTTTCTGTTTAAAACATTTTAACCTC
GAAATTTTTATTTCTGATTTCAAATTTTAGTTGAAACTTATAGAAATAGA
ACAGAAAAATAACAAAATGGCAAAGAAAACTGCATCAATTCGGGATTTTG
AAAAATAACTTTATTAGACACCCTAGCAATTTGAAAGGCTGACAAGATCC
ATTCCTATATTTTTATACTTTATTATTTTAATATTTAAGCGAATAAATAA
TAATATATGCATCATTATGTCATGAAGAATAGATATTATCTTNCATTATA
ACATTCTCTTTTTTTTTAAGTTTTTTTTATAGCAATGAAATAGGTTTTTT
ATTCAAAACTTCTAGGTGACCTTAAATTTCAAGTTGATAAAAGTTTATAG
ATGAGACAAACAAACTAAATACAAACATTACGCTATGAGTATCTTTTCTA
TTTCTATCGTCAGATAATAAGTCTAGAAGGTTTTCATAAAATATTTTTAA
CTTTAATTAATATTTATTCATGCTAAAATTTTTCAATAGTTTCGTT Coding sequence (CDS) from alignment at scaffold_108:191669..195814- >TCONS_00046274 ID=TCONS_00046274|Name=TCONS_00046274|organism=Clytia hemisphaerica|type=CDS|length=2010bp|location=Sequence derived from alignment at scaffold_108:191669..195814- (Clytia hemisphaerica)
CTTTTGAAAGTTCTCGTTTGTTTGGTGTTAACATACAATGAAGTGAAGGA
TGTGAATCGTTGGTTGAATATGCTTTACACCAACATTATCGGTGATCCAC
TAACGACCTTGAAAGTTGCCGTCCCTTCTCTGGTCTATGTCATCCAAAAC
AATTTACAATACGTTGCTATATCTAATCTGGATGCTGCCACATTCCAAGT
AACGTACCAATTGAAAGTTTTGACCACTGCTCTCTTCTCTGTTTTCATGC
TTGGCAAGAAGCTCTCGTCTAAACAATGGGTTTCCCTTTTCATGTTATTT
GTCGGTATTGCCATGGTACAATTACAACCTAGCATGCTCCAAGCCAAGAA
AACTGAAGTATCTGGACAAAACCCCTACGTTGGATTCATAGCTGTTTTAG
TATCCAGTTTATGTTCTGGATTTGCTGGTGTTTATTTCGAGAAGATTTTG
AAGGGTAGTGGAAAGGGTCCAGCTGGTAGTGTCTGGTTACGTAATATCCA
GATGGGATCCGTTGGCGTCCTTCTTGGAATAGGAGGTATGATGGTTAGCG
ATTACTCCAAGATCCAAGAGAAAGGTGTTTTCTTTGGATACACTTTATTG
GTTTGGATTATCATCTTAATGCAAGCTTTTGGTGGCTTGTTAGTAGCAGT
CGTTGTCAAGTATGCAGACAACATTCTGAAGGGTTTTGCTACATCCTTTG
CGATAATTGTCTCCTGTATTGTTTCAATTTATTTGTTCAATTTCATACTG
AGCATTCAATTTGTTTTGGGAACTGTTTTAGTCATGACTGCTATTTATTT
GTACAGTCAATAGATGAAAAAGGATTTAGAAAGTGGTGAAAAGGGAGCAG
ACGCGATGGTGCAAAACAAGACTTCATCAAACATGAAATATTGGAGTTTG
GTCATCCTCATCTTCCAAAACGCATCACTCATTTTGACCATCAGATACTC
CAGAACATTAAGTGGTGACATGTATATATCCAGCACTGCTGTTGTCTTTG
CTGAGCTTTTGAAAGTTCTCGTTTGTTTGGTGTTAACATACAATGAAGTG
AAGGATGTGAATCGTTGGTTGAATATGCTTTACACCAACATTATCGGTGA
TCCACTAACGACCTTGAAAGTTGCCGTCCCTTCTCTGGTCTATGTCATCC
AAAACAATTTACAATACGTTGCTATATCTAATCTGGATGCTGCCACATTC
CAAGTAACGTACCAATTGAAAGTTTTGACCACTGCTCTCTTCTCTGTTTT
CATGCTTGGCAAGAAGCTCTCGTCTAAACAATGGGTTTCCCTTTTCATGT
TATTTGTCGGTATTGCCATGGTACAATTACAACCTAGCATGCTCCAAGCC
AAGAAAACTGAAGTATCTGGACAAAACCCCTACGTTGGATTCATAGCTGT
TTTAGTATCCAGTTTATGTTCTGGATTTGCTGGTGTTTATTTCGAGAAGA
TTTTGAAGGGTAGTGGAAAGGGTCCAGCTGGTAGTGTCTGGTTACGTAAT
ATCCAGATGGGATCCGTTGGCGTCCTTCTTGGAATAGGAGGTATGATGGT
TAGCGATTACTCCAAGATCCAAGAGAAAGGTGTTTTCTTTGGATACACTT
TATTGGTTTGGATTATCATCTTAATGCAAGCTTTTGGTGGCTTGTTAGTA
GCAGTCGTTGTCAAGTATGCAGACAACATTCTGAAGGGTTTTGCTACATC
CTTTGCGATAATTGTCTCCTGTATTGTTTCAATTTATTTGTTCAATTTCA
TACTGAGCATTCAATTTGTTTTGGGAACTGTTTTAGTCATGACTGCTATT
TATTTGTACAGTCAATAGATGAAAAAGGATTTAGAAAGTGGTGAAAAGGG
AGCAGACGCGATGGTGCAAAACAAGACTTCATCAAACATGAAATATTGGA
GTTTGGTCATCCTCATCTTCCAAAACGCATCACTCATTTTGACCATCAGA
TACTCCAGAACATTAAGTGGTGACATGTATATATCCAGCACTGCTGTTGT
CTTTGCTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046274-exon-scaffold_108-1575043694:195270..195814 | TCONS_00046274-exon-scaffold_108-1575043694:195270..195814 | Clytia hemisphaerica | exon |
| TCONS_00046274-exon-scaffold_108-1575043694:191669..194946 | TCONS_00046274-exon-scaffold_108-1575043694:191669..194946 | Clytia hemisphaerica | exon |
| TCONS_00046274-exon-scaffold_108-1510915933:195270..195814 | TCONS_00046274-exon-scaffold_108-1510915933:195270..195814 | Clytia hemisphaerica | exon |
| TCONS_00046274-exon-scaffold_108-1510915933:191669..194946 | TCONS_00046274-exon-scaffold_108-1510915933:191669..194946 | Clytia hemisphaerica | exon |
| TCONS_00046274-exon-scaffold_108-1491911889:195270..195814 | TCONS_00046274-exon-scaffold_108-1491911889:195270..195814 | Clytia hemisphaerica | exon |
| TCONS_00046274-exon-scaffold_108-1491911889:191669..194946 | TCONS_00046274-exon-scaffold_108-1491911889:191669..194946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_108 | supercontig | scaffold_108:191669..195814 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007271 | Nuc_sug_transpt |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000139 | Golgi membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008643 | carbohydrate transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005351 | sugar:proton symporter activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008643 |
carbohydrate transport |
| cellular_component |
GO:0000139 |
Golgi membrane |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0005351 |
sugar:proton symporter activity |
Blast
BLAST of TCONS_00046274 vs. Swiss-Prot (Human)
Match: S35A2 (UDP-galactose translocator OS=Homo sapiens GN=SLC35A2 PE=1 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 4.063e-91 Identity = 178/326 (54.60%), Postives = 229/326 (70.25%), Query Frame = 3
Query: 378 EKGADAMVQNKTSSNMKYWSLVILIFQNASLILTIRYSRTLSGDMYISSTAVVFAELLKVLVCLVLTYNEVK-DVNRWLNMLYTNIIGDPLTTLKVAVPSLVYVIQNNLQYVAISNLDAATFQVTYQLKVLTTALFSVFMLGKKLSSKQWVSLFMLFVGIAMVQLQPSMLQAKKTEVSGQNPYVGFIAVLVSSLCSGFAGVYFEKILKGSGKGPAGSVWLRNIQXXXXXXXXXXXXXXXXDYSKIQEKGVFFGYTLLVWIIILMQAFGGLLVAVVVKYADNILKGFATSFAIIVSCIVSIYLFNFILSIQFVLGTVLVMTAIYLYS 1352
E G + + +KY SL +L+ QNASLIL+IRY+RTL GD + ++TAVV AE+LK L CL+L + + + +V + L+ ++ + TLK+AVPSL+Y +QNNLQYVAISNL AATFQVTYQLK+LTTALFSV ML + LS QW SL +LF G+A+VQ Q + + QNP G AV+ S L SGFAGVYFEKILKGS +GSVWLRN+Q+G G LG+ G+ ++ + + +G FFGYT VW ++L QAFGGLLVAVVVKYADNILKGFATS +I++S + SI LF F + F LG LV+ A+YLYS
Sbjct: 24 EPGTASAAHRR----LKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPL--DQNPGAGLAAVVASCLSSGFAGVYFEKILKGS----SGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATRGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYS 339 HSP 2 Score: 102.449 bits (254), Expect = 9.241e-23 Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 3
Query: 2823 KGVFFGYTLLVWIIILMQAFGGLLVAVVVKYADNILKGFATSFAIIVSCIVSIYLFNFILSIQFVLGTVLVMTAIYLYS 3059
+G FFGYT VW ++L QAFGGLLVAVVVKYADNILKGFATS +I++S + SI LF F + F LG LV+ A+YLYS
Sbjct: 261 RGFFFGYTPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYLYS 339
The following BLAST results are available for this feature:
|
