TCONS_00046337 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046337
Unique NameTCONS_00046337
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length207

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046337 ID=TCONS_00046337|Name=TCONS_00046337|organism=Clytia hemisphaerica|type=transcript|length=207bp
ccgttaaaatttttttttgtttttatttttggtcgTATTGAAAAGCTAGT
TTTAAGTTTGAACCTTTGAaacatttgatttaaaaactgTTCTATTTCAT
CCACCTCTGATACTTTTGCAAGTTTTCTTACCCTCAATATCCTTTTGTTC
TCTTTCCCCCTATCCTTTCGTTCTTGTTTTCCTCCTATCCTTTCGTTCTC
GTTTCCC
Run BLAST on NCBI

transcript from alignment at scaffold_108:552244..552450

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046337 ID=TCONS_00046337|Name=TCONS_00046337|organism=Clytia hemisphaerica|type=transcript|length=207bp|location=Sequence derived from alignment at scaffold_108:552244..552450 (Clytia hemisphaerica)
GGGAAACGAGAACGAAAGGATAGGAGGAAAACAAGAACGAAAGGATAGGG
GGAAAGAGAACAAAAGGATATTGAGGGTAAGAAAACTTGCAAAAGTATCA
GAGGTGGATGAAATAGAAcagtttttaaatcaaatgttTCAAAGGTTCAA
ACTTAAAACTAGCTTTTCAATAcgaccaaaaataaaaacaaaaaaaaatt
ttaacgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029587XLOC_029587Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046337-exon-scaffold_108-1491911889:552244..552450TCONS_00046337-exon-scaffold_108-1491911889:552244..552450Clytia hemisphaericaexon
TCONS_00046337-exon-scaffold_108-1510915933:552244..552450TCONS_00046337-exon-scaffold_108-1510915933:552244..552450Clytia hemisphaericaexon
TCONS_00046337-exon-scaffold_108-1575043694:552244..552450TCONS_00046337-exon-scaffold_108-1575043694:552244..552450Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_108supercontigscaffold_108:552244..552450 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046337 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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