TCONS_00046344 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046344
Unique NameTCONS_00046344
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1441

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046344 ID=TCONS_00046344|Name=TCONS_00046344|organism=Clytia hemisphaerica|type=transcript|length=1441bp
AGAGGCTGTCATGTATAATTTGCGAACATCGGTGGCTGGTATAGTAAGAA
TATGGAGTCATGTTACTGGTGGTAGTGTGGGCGATCACCATGGAAGGTTT
GATACTGCTCCGTTATTGCTTAAAGAAAATCAATGGCAAGTTGGAGATAA
GGCAGTGTTAGTGGACTCATCGATGCCGAGTATCGAGGGGGCATCGGCTT
CGGATGCAGGTATATCATGTCGACGGTTGAAAGAGCGACATCCGCACTAC
AGGAGTGGTCATTACTGGGTGAAGTACGCTTTAAGTGAGGGAGTGGCTAG
ACAATGGTGTGATATGGATGACGGCAAAGGCTGGATGGTGATAGGTCATG
TCAAACTCGACCCGAATGTGGTGACGAGTGTGGGAAGTGCGATAGAACAA
CATCCTAATTTGATTACAGGCGACATCTTAACAACTAATGTTTTGTTCAG
TGTATTCGGACTGACAAACACGCAGGCTTTCAATGAGGTCACCGAGGTGC
GTATTCGTTGCTTTAAACAGTGGCATGGACGCACACTTGATGTGGTGGTT
AAAGAAGAGTCCTTTGCACGAAGagtttttacAAAAGACAATTCACAGTC
AAGACCGGGTTTCTATTGCTCACGAAATCCCGGAACACCTAACATTATGC
AATTCCTATCGATGGACAATTCCCTCTTGAAAGACGTCCCTTGTACAGAT
GTATTGGGGAATTCATTTATTTGGGGTTATGTATTATACAGAGCAAGTAC
CCAATATATCTTTCCTTATTCCACTGAATGTGATGATCGTAATAGATTGG
ACTTTAATCCCAGTTTCACGGTAGAAGGAGAATGGTGGTTTTATGCCGGT
TGATTTTTCAGATGTTGCCAGTCTACATTACTGGGAAAAGAGGTTAATTT
TTATGGAACATACGAATTTCATGAGATTTACTTCATTAAAGACTTGAGTA
gacgagaaaatttttttcgcgttggtgcaatgcaacatgctctatcccgc
caacctgaaaaaaaaaataagaaagagTATGAGAGAAATACTGTATGATG
GGGAAAAAATTTCTCTTACTTTTGTCCCAGGGATTAAATCTCTTTTGAGT
ATTTTCTTcgctttttgtcccatgaaacaaaaaaagagaaaccAAGACAA
ACCtctttcttgtgttggtgggatggagcatgttgcactGCACCATAACG
CGAAAAATCTTCTcttgtccccaagccttaaaattaacagttttttttac
tAATACCGATGGTTTCATGGCATCATTGATGCAAATCATCAGTTGGATTA
TTAGAAGGAAAAGCTTAACGAGTTTACGAATGACGAGAATCACAAAACTT
CTGTAAAGCTTTCATCAAAAAGGCGGAAGCGGAATACTTTCCATAAATAC
TTTCAAGTATTACTTTATAATTCGTAAATTCAaacgaaaat
Run BLAST on NCBI

protein sequence of TCONS_00046344-protein

>TCONS_00046344-protein ID=TCONS_00046344-protein|Name=TCONS_00046344-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
EAVMYNLRTSVAGIVRIWSHVTGGSVGDHHGRFDTAPLLLKENQWQVGDK
AVLVDSSMPSIEGASASDAGISCRRLKERHPHYRSGHYWVKYALSEGVAR
QWCDMDDGKGWMVIGHVKLDPNVVTSVGSAIEQHPNLITGDILTTNVLFS
VFGLTNTQAFNEVTEVRIRCFKQWHGRTLDVVVKEESFARRVFTKDNSQS
RPGFYCSRNPGTPNIMQFLSMDNSLLKDVPCTDVLGNSFIWGYVLYRAST
QYIFPYSTECDDRNRLDFNPSFTVEGEWWFYAG
Run BLAST on NCBI

transcript from alignment at scaffold_109:42319..48661+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046344 ID=TCONS_00046344|Name=TCONS_00046344|organism=Clytia hemisphaerica|type=transcript|length=6343bp|location=Sequence derived from alignment at scaffold_109:42319..48661+ (Clytia hemisphaerica)
AGAGGCTGTCATGTATAATTTGCGAACATCGGTGGCTGGTATAGTAAGAA TATGGAGTCATGTTACTGGTGGTAGTGTGGGCGATCACCATGGAAGGTTT GATACTGCTCCGTTATTGCTTAAAGAAAATCAATGGCAAGTTGGAGATAA GGCAGTGTTAGTGGACTCATCGATGCCGAGTATCGGTAAGTGGATAAGTA AACCTGGGAGTAAAGTCTACTTATATAGCCAAAGTCTATAGGCCTCTATA TTGATGGAAAGAAAGTCACAATTGACCTAGACTAGCAATCTATAATCTTA TGATCAATTATGTCAGACGGTTGGAATAGGGCGGATGtttatttgttaaa tgcatCGGAAAGGGCGGGAAAGTTTGTGAGAGCATAGTTTGTAGTAGGGT TATAACCCCCCCAGGCTTCTTTCATCCCCCTCATTTTTACCTATCCCTTC TTCTGTAATGAAATGCTTACCCCTATAATTTCACAGAAAACAAacacaga ctacggctattaatatatagatagtAACTTTTTTCCTTTAGAGGGGGCAT CGGCTTCGGATGCAGGTATATCATGTCGACGGTTGAAAGAGCGACATCCG CACTACAGGAGTGGTCATTACTGGGTGAAGTACGCTTTAAGTGAGGGAGT GGCTAGACAATGGTGTGATATGGATGACGGCAAAGGCTGGATGGTGATAG GTAGGTACCCTTCGCTTAACCaacaaaatacatgtttttttataagcaga acacttataagcatatgaaggctcaaaTTTGCataattcctaagcataac ataagcatatatatCAGCCTgacatatttttcaagttgtcattttttatc tgtttaaaaaaggtttggtagaggtcaagttaaaatagacattccacggc tagctacattccatcGCTcccaaatctgaacaaatttttacaaaatttct gaaaattcactaaaaacttgactaagcatgattcataaacatataataag cataagctatgcctggatgcAGTAGCGgtctggcttaattttcttggtgg tgcaagctatgaaattggcgcccctggtgtttttgtccttatttgcgccc tccaccattaagtgaaaataatAAACTGCAAGatcagtgactggttgaaa gtaacgcccggaatatCTGAGttaacaaatttttatttatacgaaggtgg tggtaatgataacttgatatctatttccttgttatttcctgTCTCATGTT CGAACCCATAAGATGTTAATGCGTTGGTTTGATGTCGCGGATGCCGATAT CTTTGAGCAGATcctcaatttcctttttgtccTCTTCTTAATCTTCTTCT TTCGTGTCTTCAGCTCAAAGAGTCCATGAattatgatgttttttcttctt gattcaATGTCTCGTTTTTCTCTCCTCTCCTCtcctcttctttttgttcc gcaacaacagatttaagattttccttGTGTGCTTTGGTTATATCAGCGTA GGTTTTACGGGATGACtctttcataaaatcttttgtctgttGTATCTCTT CTTTTATCATTATCCTTGTTTTGTCTTCTAAGTCGCTCATCTTTAGTTAG TGTTAGCATTGTCTCGATGTCGTTGTTGATGACTTCTCGGTTTTTGGTCA gttcttttttgagttttttgatttcGTCGTCTTTCTTAGAAATCTGCTTT TGCATCATAtagtttcgatcaatctctcattttggggtgagcatcctctt taacccctaGTGGATACACACACACTTATCTCTTGCTTAGACTTTTCGCA gttcaatgttgatagtagttttgaaaaaaatcgtaaaataaaacgaagcg ccgcaggcgaaaaaatatttacattgcacttatataaggcgctaaaaacg tgtcaaagggcgccaaatcgcccaaccaaacatcaaaaaacaattttggc gcccccttgaaaagcttttttggcgcccctctcaggtctttctgggtggt gcactgcacaccctgcaccccctgccaggccgccactgcctggatgcttt gagaacttaagcatacacgagtcTGACCAAGGAGCATACACTTGCTTTTT ATTAGGAACTACCtatatttggaaattttgaaatacatgAAACGTTTCAA Agaacacctccttctcacagacccactgggaacccttaccactggaaaaa ttggcaaaaatatcgtccctagTGGAAAAtcatactctaatttttgtctg ACTGAAAATAACCGGATAATCAAATCCTCACTGTAaattattgtgctatt ttttccatccctacTAAATTTTCGGGCTAGAGAACAATGGAATTTAAGTC CCTAGCCATAAAAAAacaggaatatcaatccccatcgaggtTTGgaccgt tatttttacccccactggctgataaaatcccaccgtgtctgtgagaaggg ggtgtcaaaGAGACTTTTTTCTCAATCAAAATTACATCCTGTATTTGTAA GATTTATCTCTggatttaaaaaagaacgaTTTATATGAACAAATATCTGC AGCATTTACAGTAGCGAAGTAGCAAAAGATCTTTTACTGAagcctatgaa ataggctaattagGATATCAGGTCTGGcattaccgtgaaaagcacaggcc aaaatcatatattgacctgtgccgaccaattcagtttctattcagcgcgc aatcaacgcagagaaaagtaaccatgacgacaatccaagataTTGGataa agttcaaagttgatatttttattcccgtttttgaaaacacaactcaaaaa atgtcatcaatgctttttaaaaacagtcagtgatagagaatcattacatt tgtctattatttcgattctattttaaagtaacattaccataattaataat ttagtaattactgttatacatttgggaatcattcTTTTGAAAGGAACtta tttcaattacacttggaggtttctggggaattcgtcacTAGTAAACATGT ATATTGATACAGTCTgttagacattaatatggtaatatttgctcttcatc tttgattctttctacagtgattagattgacacatgcgcgataaaatttct attattggtcttcagaggttgatatattttttgaaaactcaacctctgat actcagggtaggctGGCATATTACCAAACAGGGATCACCTGATGGGCAAA GTAATCGTTACGTTTATATGTAGACTTAAGTAGACATTGAActcttgtta ttattattattctagGTCATGTCAAACTCGACCCGAATGTGGTGACGAGT GTGGGAAGTGCGATAGAACAACATCCTAATTTGATTACAGGCGACATCTT AACAACTAATGTTTTGTTCAGTGTATTCGGACTGACAAACACGCAGGCTT TCAATGAGGTCACCGAGGTGCGTATTCGTTGCTTTAAACAGTGGCATGGA CGCACACTTGATGTGGTGGTTAAAGAAGAGTCCTTTGCACGAAGGTATGC TTTTAGTTTAGACAGCTAACTTTCTACTCTACTTATGCTTATGTTTTTTT AGCAACTCATGGTTGCTGCTGCTACTTAAGCTAGATATCGACAGGTTTTG GTTGGAAAAGTTGACTTTAAtaaaccttttcgaccgtagccgcgtagcgg gcatttttttgtccgttttaccaccctaaaactgtcccagtctttttttc gcacctctAAAGATAAtagaaaaaagtctaaaaaaggattggatcgagtt tagggtggtaaaaagtGGTACGCGCCTGGGTGTATAGGCTAAGTTTCTCG GTTCTGAGACTAATCTATAGCCCTATAGAGTAGGCAAAAACTCGCCAAAC AAAACCTTTGTATGGAAAAGAACAGAGATCTTCGAATTTTAGACAGCCGA CTAGATGGTGATGGTATTGGCTTTCTAAATTAAGGCTAATGATTATTTCA TCATACAATCAGACGAGGAAGCATGATCTAtgatatttgaaattttaaac ccCTTAAAACTTTAAACGCAAAATGCTGACAATATGCTAAGTTATACGAT CTTATAAAGAATATTCTCACCTGAGCAGATGATTTGCTAGATACTTTAAG GGCGGAGAGTTTcgtgggcagaaagtttcgcgaagtcaaaaagtcgcgaa atttagcgaatttaagtttcgcgaattatggttttagcagaaatttcaca gatagaactttcacgaattcatataaaatttaccttttttggtaataaaa ACTCATGAAACtcgcaaaaatttagcaaacagcacaaaactgagtaggaa agtttatttttcgcaaaaaagactttcgcgtttttcaggtttaatttctt acctatGGCAAAAACTTTTGCGAAAAGtatcaaaatcgcgaaaaaacgcg aaagtttctgcccgcgaaagtttctgcccttaaagtagacCAAGCATTTG AAAGTTCCAATAAAAACTTTGGGGGCGAAATCTCATCATTAAGATCTtct tcaaagtaaaaaaaagtatcaTATTTAGAGTGGTCTAGGACGAACGGGGA AGTTCGATAAGTTCTCATTTAAACGAGAACATGATAAAATATTGTTTAGG CGTATGCTGATTGATATTTTGTTGAGATTTATTTAGAAGGGATGGGTACC CGgagggggggcactcaaggtaaataaCCTACCATACATTgtggccctta agggtatattttccatgcttcccaaagtgcactgtacaGGTCGAAACCAG CTAAAATCAGAGaaattgcactataagggtgtaaaatttataataataac cctaacggtgcattttcttgaaaatttgtgACCATTTACAGTCAAAATAT Ggtcaaagtttttcaagaaaatgcaccgtaagggtggatttttttgctta aatatgctcaaattttgcaaaattttgtctgcactgtaagggtccgattt caaaggcctagtTCTGGGCCGCACGTCTGTTCGTTTTttaatcgagtgcc cccccccgatGGGTATTCAGCTTGTTTCACAGGCGTTTAATGACAGCAAA CCTTGATCCTTGCCTTAGCGACCACCTCACCAATAACCGGGAATTTTCat cccgtttcttagtgagttccactttgatgattttcaaaaaatagaagcct ttcaagtcctctgacgcaaattcgatttttttcgctGCTGCAAGAGCTTC GAAAGCTTAAAGTGACGTcgaaaaatcgaatgtttggagcccgaaaaccc gggctcaaaacattcgaaaaggtcacaaagtggaatagacgttaattgcg tagggAAAAAgccgtctagtataggctatccTTGCCTGTACCAAAcgata actttttttttctctaaatacCGTTGAGCcgattgataaaaaattgcGTG TTAGGATATAGGGTTAAACTGTAGGGAACCATTCAGAATGAGAAAATCTT GTTGtgaaattttgttcttttttagagtttttacAAAAGACAATTCACAG TCAAGACCGGGTTTCTATTGCTCACGAAATCCCGGAACACCTAACATTAT GCAATTCCTATCGATGGACAATTCCCTCTTGAAAGACGTCCCTTGTACAG ATGTATTGGGGAATTCATTTATTTGGGGTTATGTATTATACAGAGCAAGT ACCCAATATATCTTTCCTTATTCCACTGAATGTGATGATCGTAATAGATT GGACTTTAATCCCAGTTTCACGGTAGAAGGAGAATGGTGGTTTTATGCCG GTTGATTTTTCAGATGTTGCCAGTCTACATTACTGGGAAAAGAGGTTAAT TTTTATGGAACATACGAATTTCATGAGATTTACTTCATTAAAGACTTGAG TAgacgagaaaatttttttcgcgttggtgcaatgcaacatgctctatccc gccaacctgaaaaaaaaaataagaaagagTATGAGAGAAATACTGTATGA TGGGGAAAAAATTTCTCTTACTTTTGTCCCAGGGATTAAATCTCTTTTGA GTATTTTCTTcgctttttgtcccatgaaacaaaaaaagagaaaccAAGAC AAACCtctttcttgtgttggtgggatggagcatgttgcactGCACCATAA CGCGAAAAATCTTCTcttgtccccaagccttaaaattaacagtttttttt actAATACCGATGGTTTCATGGCATCATTGATGCAAATCATCAGTTGGAT TATTAGAAGGAAAAGCTTAACGAGTTTACGAATGACGAGAATCACAAAAC TTCTGTAAAGCTTTCATCAAAAAGGCGGAAGCGGAATACTTTCCATAAAT ACTTTCAAGTATTACTTTATAATTCGTAAATTCAaacgaaaat

Coding sequence (CDS) from alignment at scaffold_109:42319..48661+

>TCONS_00046344 ID=TCONS_00046344|Name=TCONS_00046344|organism=Clytia hemisphaerica|type=CDS|length=3408bp|location=Sequence derived from alignment at scaffold_109:42319..48661+ (Clytia hemisphaerica)
GAGGCTGTCATGTATAATTTGCGAACATCGGTGGCTGGTATAGTAAGAAT
ATGGAGTCATGTTACTGGTGGTAGTGTGGGCGATCACCATGGAAGGTTTG
ATACTGCTCCGTTATTGCTTAAAGAAAATCAATGGCAAGTTGGAGATAAG
GCAGTGTTAGTGGACTCATCGATGCCGAGTATCGAGGGGGCATCGGCTTC
GGATGCAGGTATATCATGTCGACGGTTGAAAGAGCGACATCCGCACTACA
GGAGTGGTCATTACTGGGTGAAGTACGCTTTAAGTGAGGGAGTGGCTAGA
CAATGGTGTGATATGGATGACGGCAAAGGCTGGATGGTGATAGGTCATGT
CAAACTCGACCCGAATGTGGTGACGAGTGTGGGAAGTGCGATAGAACAAC
ATCCTAATTTGATTACAGGCGACATCTTAACAACTAATGTTTTGTTCAGT
GTATTCGGACTGACAAACACGCAGGCTTTCAATGAGGTCACCGAGGTGCG
TATTCGTTGCTTTAAACAGTGGCATGGACGCACACTTGATGTGGTGGTTA
AAGAAGAGTCCTTTGCACGAAGagtttttacAAAAGACAATTCACAGTCA
AGACCGGGTTTCTATTGCTCACGAAATCCCGGAACACCTAACATTATGCA
ATTCCTATCGATGGACAATTCCCTCTTGAAAGACGTCCCTTGTACAGATG
TATTGGGGAATTCATTTATTTGGGGTTATGTATTATACAGAGCAAGTACC
CAATATATCTTTCCTTATTCCACTGAATGTGATGATCGTAATAGATTGGA
CTTTAATCCCAGTTTCACGGTAGAAGGAGAATGGTGGTTTTATGCCGGTT
GAGAGGCTGTCATGTATAATTTGCGAACATCGGTGGCTGGTATAGTAAGA
ATATGGAGTCATGTTACTGGTGGTAGTGTGGGCGATCACCATGGAAGGTT
TGATACTGCTCCGTTATTGCTTAAAGAAAATCAATGGCAAGTTGGAGATA
AGGCAGTGTTAGTGGACTCATCGATGCCGAGTATCGAGGGGGCATCGGCT
TCGGATGCAGGTATATCATGTCGACGGTTGAAAGAGCGACATCCGCACTA
CAGGAGTGGTCATTACTGGGTGAAGTACGCTTTAAGTGAGGGAGTGGCTA
GACAATGGTGTGATATGGATGACGGCAAAGGCTGGATGGTGATAGGTCAT
GTCAAACTCGACCCGAATGTGGTGACGAGTGTGGGAAGTGCGATAGAACA
ACATCCTAATTTGATTACAGGCGACATCTTAACAACTAATGTTTTGTTCA
GTGTATTCGGACTGACAAACACGCAGGCTTTCAATGAGGTCACCGAGGTG
CGTATTCGTTGCTTTAAACAGTGGCATGGACGCACACTTGATGTGGTGGT
TAAAGAAGAGTCCTTTGCACGAAGagtttttacAAAAGACAATTCACAGT
CAAGACCGGGTTTCTATTGCTCACGAAATCCCGGAACACCTAACATTATG
CAATTCCTATCGATGGACAATTCCCTCTTGAAAGACGTCCCTTGTACAGA
TGTATTGGGGAATTCATTTATTTGGGGTTATGTATTATACAGAGCAAGTA
CCCAATATATCTTTCCTTATTCCACTGAATGTGATGATCGTAATAGATTG
GACTTTAATCCCAGTTTCACGGTAGAAGGAGAATGGTGGTTTTATGCCGG
TTGAGAGGCTGTCATGTATAATTTGCGAACATCGGTGGCTGGTATAGTAA
GAATATGGAGTCATGTTACTGGTGGTAGTGTGGGCGATCACCATGGAAGG
TTTGATACTGCTCCGTTATTGCTTAAAGAAAATCAATGGCAAGTTGGAGA
TAAGGCAGTGTTAGTGGACTCATCGATGCCGAGTATCGAGGGGGCATCGG
CTTCGGATGCAGGTATATCATGTCGACGGTTGAAAGAGCGACATCCGCAC
TACAGGAGTGGTCATTACTGGGTGAAGTACGCTTTAAGTGAGGGAGTGGC
TAGACAATGGTGTGATATGGATGACGGCAAAGGCTGGATGGTGATAGGTC
ATGTCAAACTCGACCCGAATGTGGTGACGAGTGTGGGAAGTGCGATAGAA
CAACATCCTAATTTGATTACAGGCGACATCTTAACAACTAATGTTTTGTT
CAGTGTATTCGGACTGACAAACACGCAGGCTTTCAATGAGGTCACCGAGG
TGCGTATTCGTTGCTTTAAACAGTGGCATGGACGCACACTTGATGTGGTG
GTTAAAGAAGAGTCCTTTGCACGAAGagtttttacAAAAGACAATTCACA
GTCAAGACCGGGTTTCTATTGCTCACGAAATCCCGGAACACCTAACATTA
TGCAATTCCTATCGATGGACAATTCCCTCTTGAAAGACGTCCCTTGTACA
GATGTATTGGGGAATTCATTTATTTGGGGTTATGTATTATACAGAGCAAG
TACCCAATATATCTTTCCTTATTCCACTGAATGTGATGATCGTAATAGAT
TGGACTTTAATCCCAGTTTCACGGTAGAAGGAGAATGGTGGTTTTATGCC
GGTTGAGAGGCTGTCATGTATAATTTGCGAACATCGGTGGCTGGTATAGT
AAGAATATGGAGTCATGTTACTGGTGGTAGTGTGGGCGATCACCATGGAA
GGTTTGATACTGCTCCGTTATTGCTTAAAGAAAATCAATGGCAAGTTGGA
GATAAGGCAGTGTTAGTGGACTCATCGATGCCGAGTATCGAGGGGGCATC
GGCTTCGGATGCAGGTATATCATGTCGACGGTTGAAAGAGCGACATCCGC
ACTACAGGAGTGGTCATTACTGGGTGAAGTACGCTTTAAGTGAGGGAGTG
GCTAGACAATGGTGTGATATGGATGACGGCAAAGGCTGGATGGTGATAGG
TCATGTCAAACTCGACCCGAATGTGGTGACGAGTGTGGGAAGTGCGATAG
AACAACATCCTAATTTGATTACAGGCGACATCTTAACAACTAATGTTTTG
TTCAGTGTATTCGGACTGACAAACACGCAGGCTTTCAATGAGGTCACCGA
GGTGCGTATTCGTTGCTTTAAACAGTGGCATGGACGCACACTTGATGTGG
TGGTTAAAGAAGAGTCCTTTGCACGAAGagtttttacAAAAGACAATTCA
CAGTCAAGACCGGGTTTCTATTGCTCACGAAATCCCGGAACACCTAACAT
TATGCAATTCCTATCGATGGACAATTCCCTCTTGAAAGACGTCCCTTGTA
CAGATGTATTGGGGAATTCATTTATTTGGGGTTATGTATTATACAGAGCA
AGTACCCAATATATCTTTCCTTATTCCACTGAATGTGATGATCGTAATAG
ATTGGACTTTAATCCCAGTTTCACGGTAGAAGGAGAATGGTGGTTTTATG
CCGGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029593XLOC_029593Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046344-exon-scaffold_109-1491911889:42319..42503TCONS_00046344-exon-scaffold_109-1491911889:42319..42503Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1510915933:42319..42503TCONS_00046344-exon-scaffold_109-1510915933:42319..42503Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1575043694:42319..42503TCONS_00046344-exon-scaffold_109-1575043694:42319..42503Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1491911889:42860..43018TCONS_00046344-exon-scaffold_109-1491911889:42860..43018Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1510915933:42860..43018TCONS_00046344-exon-scaffold_109-1510915933:42860..43018Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1575043694:42860..43018TCONS_00046344-exon-scaffold_109-1575043694:42860..43018Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1491911889:45584..45812TCONS_00046344-exon-scaffold_109-1491911889:45584..45812Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1510915933:45584..45812TCONS_00046344-exon-scaffold_109-1510915933:45584..45812Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1575043694:45584..45812TCONS_00046344-exon-scaffold_109-1575043694:45584..45812Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1491911889:47794..48661TCONS_00046344-exon-scaffold_109-1491911889:47794..48661Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1510915933:47794..48661TCONS_00046344-exon-scaffold_109-1510915933:47794..48661Clytia hemisphaericaexon
TCONS_00046344-exon-scaffold_109-1575043694:47794..48661TCONS_00046344-exon-scaffold_109-1575043694:47794..48661Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046344-proteinTCONS_00046344-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:42319..48661 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.12426 1.19572 1.40418 1.07927 1.86404 1.4807 1.85497 1.91591 1.14079 1.72664 2.7557 1.46906 4.22823 5.17777 2.466 2.80846 2.58243 2.23461 5.78418 7.35398 1.6415 1.9437 1.25171 1.38777 0.89662 0.859027 1.82187 1.33126 1.87034 2.27005
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014716Fibrinogen_a/b/g_C_1
IPR002181Fibrinogen_a/b/g_C_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046344 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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