TCONS_00046362 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00046362
Unique Name	TCONS_00046362
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3384

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_109:128457..143501+
coding sequence from alignment at scaffold_109:128457..143501+

transcript sequence

>TCONS_00046362 ID=TCONS_00046362|Name=TCONS_00046362|organism=Clytia hemisphaerica|type=transcript|length=3384bp
GTTCCACAAGAGACTGACAATCAACAATCACTATCAAACCAGGCTATACG
TTTAACAatcactgaatttttttaacataaaaatgaaaatactattccat
aaaataattttattggcATGTTTTGTTGGTTATACATCGTCCACGTGCGC
CAGTTATTACACCTGTGACACATGCGCTGCTTACAAAGGTTGTTATTGGT
GCTCAACCTCCTCCAAATGTGAAGATTATTATGGTGAAAAATTTGCGGAC
ATCATCTGTCCGAATAAATGGATACAACACGATAGCTTGTGTCCGGCTGT
TGCCAATACTAATGGTGGAGGAGCAGCAGATTCTGATTTATTGAACCTTT
TAACAAATGGAGGTCAGACTCCTTTGAACTCTCTCCTTAGTGGAGGTGAT
AACTCTTTAGCTCAAGCGCAACAGACTTCTCAAGGGAGTAGCCAAGAGTT
AAAAGATTTGTTACACAAACTATTATTATTAAAGCTTCTACGTAAAATTA
AAGCAGAGGGGACGAGCTCATTGACACCTCAAGAAACTAAACTGCTGAGT
CAGATCACCAATGTGGGTcagcagcaacaacaacaagtcGTTACCACGAC
AACAACCACGACCCAATCCCCTAACATgaaaaacgaaatcaaaaaaCTAT
TGAATATCTTACAAAAACAAACGGACAATAAAGCTGGAAAAGGGGGTAAA
GAAGCAGTTACTACGATGAGTCCTGGTGTTGGTAAAACAGCACAGAATGC
AACGATAGGGAAAACGATTGCACCAAGTTCACCACCAACTCAAAAGCCAC
TAATAACTGAAATCAACAAACAGAAAGCAACCAACGAAACGGTCTTGAGT
TTATTGAAGAAAATTGACGAACAGAATGCTGGTGTTGAATACCAAGAAAA
TAAACCTGAATCCATTGGAAAACCGGTTGCTAAAACAAAACCTGTTGTTA
AGACCACACCTGTTGCTAAGGTAACCAAAGCAGCCGTTATTAAGAATGGT
GTTTCTATGAACTTTTGTAAGCTGTACGAAGAGACAGGTTTGTGTAATTC
TGATCATAATTGCACCTGGTGTAACACAAAGGATGTCTGCATCAGGAGGT
CGGATACTGACTACAAAGGATGTGTGGATGCCAAGGACCGCATGACTGAT
AAAGAATTCGGGCTTGACACGTGTTTGGCGATGAAACATTGTAAACAATG
TGTTGAAAACGACAAATGTTATTGGTGTGACGTCTCCAAAAGTTGTCATA
CCTACCCGTTCTTCGGCTACGTCCCTCACTCGTGCGGCGGTGACTGGTAC
GTCAAACAATGTGACGTACAACTTGCCGTCATCATCATCGTACTGCCGTT
AATAATCATCTTATTGGCTATGGTCACATTTTACTTCTGCTTGAAATATT
GTTATTACCGGCGTAAAGTGTTACGAGTTCCGTTATTTGAGAAACCCGGT
GTTTTTGATTACAGAAAAGACAAAAAGGTTTATTATGTCAATCCTGAAGA
TGAGAGTTCCGATACGGAATTAGCTGCGGAAAAGATCCGGAAAAAGTATA
GATTACCGGTAGAAAGGGAACCACTTATTGATCCAAACAGTTGAGAGAGG
GCGTTCtagatgtttttttgtaaatgtctGTGTGGATCGAACGAGATAAG
TTTCCACCGAGGTCTCATCGGTAAAAGCTGCAAGGAAGCAAAATAGTTAT
GAATCTGGGTTTgcattttgtgttttttatgtTGTTGTGTTGTTTCGTAT
GGACCTCGTGGATGAATAAGTGAATAGTTTTGTACCAAAGAAAGACCTAT
CTTGTGGTCTCGTTGCTGGTTAAAATTGCCTTGACATTCGAAAGAGATTT
GGTTAGaatcaaacaaaacaatttggaaACAGACTTAAGGCAtcgttatt
ttcctttttggtTGTTATTAAAGTTTATCTCAAtttagctggcagtgttt
tttcagacctcaataacttttgatagaatttgaattaattagcggttttg
tgctcgttaaaaagataatctgGAGTGGGAtattgtcaaaaaagaaaaaa
aaattaaataatagaaaattgaagatgaaaaatgaagaagaagaaaatca
acttcttgtagaataatgctatgatcttcatttttgtatcagaaactctt
caatcttagaacgtcataaatACAGCTTAGAAACTTTGTGCCCTGGTTGA
CTTAAGAAAGggctcttttttctttttttttgataaatatgtttcgatgg
aataatttttttttcaaaattgttttaacatttatgatgttctaagattg
aagaatcactcgtgtgaaaatgataactatgcacaattattgaagaagtc
gattttcttcttcttttccgatcttttttgagtttttttctttataacaa
tattccactcctgtttatcttttcaacgagcacaaaattgctacttaatt
caaattctattaaaagttatcgaggtttgaaaaaacactgccagctaatt
tgaaatagactttaagtCATGATGCGGCAacgaaaaaactgaaaattatg
GATTTTTCAGATTAGCGGATTGAATTTTAGTTTAAGAATTCAtacttttt
tttgcattttttatttttttacatttttgcacaaatttatttttttattc
tgtAAAATTAAAATTCCTCAAAGTTCCAAGCCCCTTCTCCTATATCATTC
AAGGATATGTATGATGTTGTGTTTGCCCctcatttcattgaaatttcttG
ACAGCTAGGAAATATTTGTATATATTAAAACCATTCATAATTGGAAAACA
GGAAACTTTTCGTTCAACATTATTCAATACTTTTTCACTTTCGAAGGcgg
gatttaaaaaaatattttcacgcACTCACACTGGGGTGTCTAATGCGTCG
TATTAAATAACAGTGACCTTAAGggtgcattttcattttttagacgTGTT
TCTCGCAATTTGAACTCCTGGATCTCTTAGTTCAAGGAGAAGAATATTTG
TTTGTTGGCCTCCCCATATCCTGGCTACCGCGATACCATTTTGTATATAC
ATTATTTTTGTTtgacaattttctttttgatatctttattttgtattttt
gttacAAAGTTATTCATCATATATTAAGTTATTCACAAATGAACAATAAG
AAATAATAATGAAATGTAATgcaataaaatcaataaaaccgTATATCACA
TTTCCTTGGTTACTGGGTCATGCTTTTGTGTTAATCAGGTTGCCTGGGAT
GAGATCATTTCTTCACTACTGATTAATGACACATAAGTCACACCTACCTT
CACGATATTTACAATCTATGACACTCTTTCCATACCCATACCGTAACATT
CGCTCTGTTTTTTTCGAGATCAACTCTAGTAGCT

Run BLAST on NCBI

protein sequence of TCONS_00046362-protein

>TCONS_00046362-protein ID=TCONS_00046362-protein|Name=TCONS_00046362-protein|organism=Clytia hemisphaerica|type=polypeptide|length=503bp
MKILFHKIILLACFVGYTSSTCASYYTCDTCAAYKGCYWCSTSSKCEDYY
GEKFADIICPNKWIQHDSLCPAVANTNGGGAADSDLLNLLTNGGQTPLNS
LLSGGDNSLAQAQQTSQGSSQELKDLLHKLLLLKLLRKIKAEGTSSLTPQ
ETKLLSQITNVGQQQQQQVVTTTTTTTQSPNMKNEIKKLLNILQKQTDNK
AGKGGKEAVTTMSPGVGKTAQNATIGKTIAPSSPPTQKPLITEINKQKAT
NETVLSLLKKIDEQNAGVEYQENKPESIGKPVAKTKPVVKTTPVAKVTKA
AVIKNGVSMNFCKLYEETGLCNSDHNCTWCNTKDVCIRRSDTDYKGCVDA
KDRMTDKEFGLDTCLAMKHCKQCVENDKCYWCDVSKSCHTYPFFGYVPHS
CGGDWYVKQCDVQLAVIIIVLPLIIILLAMVTFYFCLKYCYYRRKVLRVP
LFEKPGVFDYRKDKKVYYVNPEDESSDTELAAEKIRKKYRLPVEREPLID
PNS

Run BLAST on NCBI

transcript from alignment at scaffold_109:128457..143501+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00046362 ID=TCONS_00046362|Name=TCONS_00046362|organism=Clytia hemisphaerica|type=transcript|length=15045bp|location=Sequence derived from alignment at scaffold_109:128457..143501+ (Clytia hemisphaerica)
GTTCCACAAGAGACTGACAATCAACAATCACTATCAAACCAGGCTATACG
TTTAACAatcactgaatttttttaagtaAGTATCTGtatattcgaatttt
tctttgTCTGACCCAAAAAATGGAGTCAGCCATGGTCATTCATCATTGTC
TGCACTTTACTGCCACCAGACTGCCAACAAAAAGTCTGGCTGCCATAGAA
TATTGTCCAAAAATGCCTTGCTTTTACCATCAGGACCATCCACACAGATA
CGAACAGTACAGCATGCAGTGTTCCACACTCCAGTCTACTGTAGAGAAGA
ATGACGTGCATAATTTGTTGAGTATATTCAGGTTTAAATGAAGTCCAGAC
GATGTCGTCAGTCAATCGATCGAACCACCATCGAACAATCGAATTTCATC
GTAACTAATCGAACaatagacaggagacccgtcgtgtgtttttttataat
ttgatgtacacaagacgggttcgagctgtgagtccaatattggactcaca
ttttttacagtgggaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaaaaatt
gaaaaatttcattcgcGGATGGTGGAATTATTAACGccccaaaaaaataa
ttccaaattagGAATTAAACGAACTGCCGTTTTTATTATCatgaagaaaa
acagaaagtgagtttcccgcgttttataaatAAGACGTCAATTTACTGGG
AGGAGAGGCTGGGAGAAGTGAAGTTTTTTCTAGGAATTATAGCTCGGTCC
CCCGAGCAAGTCAAGAGCTCAATCTTTTCCCACCTAAATGGAATGGTAAG
AATCTTATGAAGTACTTTTTAACGtgcgattttttctatttttggagaaa
atctagGTATTTGCTTCATATTCCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNctaattaggaatttttttcttcctaattaggaataagattccta
attaggaatactagtaaaagtaagaaaaatgttcctaatttggctaaagg
tactgactgactaaaataaaaaccaaatttcgaaatttgcgctttctcta
agaaagtgtgaccagtNNcaggtcattcattttagggctatgcatgttag
cctccactgatgcaagttactcaatctcacggtatgttttcaaccgttat
taggatctgctgagaaattcaaactctcagcccataccatgctatacatt
tcgccatcagtttatcaaagaagaaatcatagcatggattcccaggctaa
tcGAACAATAGCTGTTCAATACACCTTCCCCCAGCTTCCCCATAAatcaa
acttctcagaaatggcctgGGAAAATGTGTTTGGGAGGTAAATGGTAAAC
AAATGCGTTTTTGCCTgcgcaaaagattttcagggtggtataatatcatg
aatagattgaacatactaaaatttgaggggattttgttctacagaactta
agaaaagctcaaaaaaccaactttccctaaggaaacgcaggcaaaaacgg
gtttgtttgtttacctccagagcccaaacagtggagagcatcaaaataat
gcgcacgcattagttttacgaattacgggaaaggtgtattaccGAACCAC
ATCAGAGCCtatgacgctaagaaatttcaacAGAATATCGATTTTCAAAC
TGTAACATTTTGTATTCCATCCTTCGCTACACCTGCCATCTTAATTCAAA
CGCATAAAATATAACAGAGATGATATCCAATACCCTTCTGTTACGTTTGT
AGGAATATGTTATCATCTccctaataaaaaaaacagagaTACCGCAATAA
AAAATAGTATTTTGATATACAAGGGCCGCGCTGACGGATCGTCTACAtaa
ttaccgtaagttggtctaatatcgacatccctcgtctaattccgacaccc
ttttttagagacaggaataatattaaggcttgaatcactgattggaAAAG
AATAATTCCTCTCTGACcattaagcaaagaaaaatagtttcaaactttat
caatttcagctgataaaaaggatgttgaaattagaggagggatgtcaaca
ttagaccaagttacggtagcgAGGTTAAGCAGGAGTTAATTTTGTACCGT
AAGCGCTCTATACTGTGGGATTTTCGCGGGCTAGCGCCAAACTCCTGAGG
CCTCTTCAGATAGTGTCACAATGAGGCGAAcctcgaaaaatttttgtttc
tggtCCACCTggtgacgaaaaaaacactcacccgggggccgcaaaatatt
tttttttgctaaatttcgatcccaaaactcgattttttaaagcactccca
gaagttaaaatgatggtcttctttaccttaaatctgtagtaagttgacac
cgctacaggcttcggcataagaaaaattcacgtgtgatcatcgcacgcct
aaattttgatttatagtggTCTAGGTGTGCGATTATTCAAACttgttgtt
attctattcaattgtcattttataatatctaaataacatgtattactttt
ttgtaatttaatgcgttatgtattgatgttatgttatgtatatgttatga
tcttattatttttttttcggtctgcactttgttgacctgtgatctgtgac
ctgcgacctgtgacctgcgttttacactaaccgcaaAAAAACTTCTCTTA
TCAACCTAGGTAAGTCCCAGTTCATGATCATTTACTGAAAAAGTTACAAT
GAGATTCATGGTTATCGTCTAATAACCTGAAATTTTGGGATTCTGAATTT
TTCACTATTGTCtaccaaatatccaaaaatggaggaattcaaatttttct
actATCACCACCTGCCTGGttcttacagaaaatggctGTTAatgttaccg
tcaactgctcttctaacttgggacgattggtcaaaacatgggactgattg
atatctggcctgtattttcacttattgttaaatctctttgacatcaaatt
tgttttgatctccaccaagtttatcaatcatactttctgtaataacatgt
catgataactttcactgatagcgcgccctttttaacttttttgttttcat
tcaaaatgaccggacgctgattggagaattagagaacgcccgccaaCTAA
CCACCTATTGCCTGATGACATTAACAAATGATTTCAAACGCtccttcgtt
ccagacattcacCTGTGTTCcacactacggatttttttcatatttcgatt
taaaagcctacttgatGCAAAAGAGGAatggtgtattttttaatacaccg
ttcattaactcaaatcaaatgactttggaggttcggtgaaatggtggccg
aattgccttaccatgttttttcagatagtcccaagttattATTTAACAGG
ACgtcaatattagaccaacttatagTATATACTGTAACGGCACTGCCATC
AAAAttacaataaaacaaagaattttctatcaaaaaatactttcaaacaT
TCCAATAACTTCCattttaaaaacttgaaaaccaACATATGCGGCTTGAT
GATTTGGCCTATTTGNAACATTCCAATAACTTCCATTTTAAAAACTTATG
CGGCTTGATGATTTGGCCTAGTTGAAAAAGGCAGAACAGAACCCCGGCAG
AACAACCAAGAACTATtctaatctgtcaatcatttgaaGTGTACAGAGTG
AAGAGTATGCAAAGTGTATGCAaagtgattctagctttacTGTCATTATA
ACTAGCTTCATAAAGATAGTGCCACATAgtattatccctttattttcatt
tctggaaattttgcaaaaaaatagaatattacttactttttgatactttt
tgaaggcttctttgttcgtctcaacaatcatccaatttgagaAATCTGAT
GATGGACCATGCCTTTGATGCTATTTGAATCAGCTCTCCTAAGAGGAAAG
TAATTCAGCAGCAGTGGCTCGTCGGGTAGTGAATTGAGATATGGTCCAAT
TAATGTCGTTTTTGAGTCAATTTTGATGTCAATTTTTGATGTTACGGATG
GGCTTTGGGAGGGCTTTAAATAGTCTGGGACCTTCTTCTGTCAGGGAGTC
TCTCCAAATGTTGACCTCTTTTCAGCTCTTTTAGATAGCACTTTCTGCCC
AGTCTCTGGTTATGGTAACTGAAAATGCCACCTTTGTTCTCagcatagtt
aaaatttggGACAAGCTGTTCTAAGATGCTCCAGGTGTAGATGGTTTAAG
TTCTTTCATCTTCTCCCGATAGTTGCTAGATGTTGAAATGAAGGGATTCC
ATTCAAGTAGGAATTTTGAAGTGATTAAGTTGTTGGATCAGATATCTTTT
TGAAGGTGACCACAGCTGGGAGCAATAGTCAATGTGTGGTAGTAGACAAT
CTCTTGTCAAGTAATGCTAACTCTTTGTAAATCACTCTTACTACCACACA
TTGACTAtcggaccattcaaaaagtacgtacgctcgaaaatggcaaattt
ttgactcccccttcccccttgtacgctttcgtacgctttttagtacaccc
cccctaaccaaagtcgaaacttgaaactcttgtagttgtaacagtagaat
atgtaggtatccaatcgtatttataacaaagtctcaagaaattaaaagaa
tctataagatgaacaaaaatgccaaaggagaaattttttgatatgaaaat
attgcgtttttctctcaaaaaagacaatttaGGAAAAGttacgagcgtac
gtacttctcctcaaggacccccctccccctcgtacgctttcgtacgcttt
tgggagtaccccctcccccctctcgagcgtacatactttttgaatggtcc
ctatTGGTATTGCTCCCAGCTGTGGTCACCTTCAAAAACATATCTGATCC
AACAACTGGAATCACATAATATCAAACAGTTTTAGTTGTAATTTGAAAGC
CTGTATGGTATGGGGTTGTTTTAAAAGGTGGTGCCGTACCATGGGGTACC
TCAATGGTGTACCTTATGGTCTACCCCGAAAAAGATTTACAGACCAGACT
GGAAAATAATATGCAAATAATACAACCTTACCTTTATGAAATGGATTAAT
TTTCACCATTCTGCCTATTTCATTCATCAATTTCCCTGGGGATAAAATTA
TGATATTGAATTTTAGTGCAGACAACATTTGGCCACAGTAATTAACAAGA
ctacaataatttcaaaatcatgGAACTCACTAGCCTGCTGTAGTCTTTTG
AATCAAAAAATATCAGGAAATAACATAAACAATAAGTTTTATGGTCTGTA
AAATGCCAGCGCAAAGATTTTTCGTGAAACAACAGCGCTACACTAGATTC
TTACGTGTATGGTAtacaaaacaagaaaatgttgttttttcagcaaaatt
ttattCTGGAACCATTTGCTATTGGAGTATTTAAAGCTTGAACAGTCAGC
TtatctactctcgggtacctaatagccgggggggggggNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNgctaatacagcagaattaggacaaaagagggaactttca
aaaacattttcccaaaaatcaataagcggggggttggaataagaatgtcc
tgggtggaaaattttcgaaaaattaattagctgGGGGACGggtattaggt
acccgagagtatgaaGATAGTAAATTATCATGCTGTGGGAATGAGAAATC
AGAGTAGACCATAAGGTACACCATTGGGGTACCCcatgatttttaaaaca
acCCGCCTGTATGGGTTATAACCCTGAGGCAATAACCCTCTGGCATTAAA
ATGCACTTTCAAGTGCATACTTAATTCCAAAACTTCATGGCATTTTATAT
TTGCATTAGGTGGCAGGATGGTTTGCACAGTTTTCAAGTCTTGTTTTTTG
GAACCCTTTAGTAGCTCTTTTACGCTGGCTTCGTATCTTTTGGGTTGTTG
CATTTCACACCCTACACCCttctgccaggccgccactccTGTtccatttt
tatcatttttattatttttatcatttaagGGCTTGAAGACTAAAAATTAT
TGGATGAAATAGGGGTAAACCTATATTAATGCCGATTAGATGATCTAGTA
ATTGGATACACTGCTTATTATATAAAATACCtagtaaatatttcttttta
tgtGGCTTATTTCGTCACCAGAAATAAAGACAGTGATGTAATGATTATGT
ATCATCCTCTTGTTATCATAGACATTCCATTCATGAGTTACATGTGAAGT
GAGTACTGTGCAATCTTTTTTGAGATGAGAAAACCGAGAGAGGGTTTTAT
ATTATTCATGTCATGCTGTGTTTTATTGTGTTTTTAGTTTGTTACTGTTT
TATGTTGAAACTAAACTAACTGGCACTGAGGTTTTTCTGCTACTATCTTT
TtgagataaaaattatttcttttagaGAAACATTTTGGTAACCCACTTGA
TGGTATATTTTGATGTGTTTGGAGAGATAAATCTTGTTTTGGATTGGACT
ACCTTACAGTATACAGATAAAACTATTTATAGAGCTAAGCTATAGTTAGT
CTATTTTAattcgttttcaaaaaataatctttttaaTGAAGTAACCATGG
TTGCAACTTATCTTGAAGTAATCAAGTTTTTCTCGATGATAATTCCTTTA
TGTAAATATCCACAGAAAGGGATGTACTTTTAATGAGTTGTTGTGTGTCA
ACAATTTACTATTGATTTGAGAGTGGCTTTAATTTTAAACTAAATGCTGT
CGAATGGCTTGCAATCCTAAGGTTTCAAGAAATCCGTACATGGAATGATT
AAGATTTtaatcaatattttcattatctGAATTTTGCTGCATTTTACTAC
AAGTTTCTCCTGTTTTACTATTCATTCTTTTGAGTACAGTTTTAACTATC
AGTTTTTGTTTTTACCTAATTTCAGCTTTTTTCTTAATTAAAATTAGATT
ATATTATTGAACACAAAAGTCTGAGGAAAACTGAATTTTCAATAATTGAT
TAGTGAAATGTAACATAGTCATCTTTTTGGGGCTCAGTATCCTAAGGTAT
ATGGGAATGTCGGATTTGTGcggattttcaaatttaattgtTTTATGGTA
TATAATATGATCTGAAACACCTCCACAACCAAACATATTTGTTTATAGAT
TATTCCATCATTTTCTTTGTTGACTTGCAAAACACTTTGACAATAACTTG
AGGATTTAACAAGATGAGTTTGTTTGACGTTTTTCTTGCATTATTGATTT
GTGTATGCAAGGAAAAGtaattgacaaaatttttgaGATTCCCCctcttt
tctgacattttctgATTTACTTTTCCGTGTACCTAGAATGCGTAATCTAA
AGAGAAATGTTACTATCATTATTGTCAGATAAGCTTCAATGGTTCAATGG
AATACTATTGAATACTGTTGGATTGCAATTTTGTTcgtttttgaacaatt
ttaaaGATAGAACCAAGGTTTGAATGCTCAAGCGTATAGTTCAAGTTtct
ctttttatttaaagttagaaaatccttttttgtcGGTAGGTAGAGAAAGA
GAGTATGTTTTTTATTAGCTGATGAGTACTACATCTTAAATATGTTTGAA
GtctcaagttcaactttttcgaatctttttagGTCTTACTTTTGTTTATA
CTGTGGGGGTGGGGAAGTAAGTGAAATTGAGAGTTTTTTGTATTGATGGG
AAAGTTTTGTTTGCTGTTTCCATTTCCATTAATATGACGAATTCAGAAAA
ACTGTTCAATATTTCACAAATATACTTCCAGTGTCAAATATCCTGATAGA
GGAGAATATATATTTGAGAAATAACGAAGGGACATTGTTCTTTTTAACGT
ACAAAATTTTCCCTTACTTTTCCCTAATTTTTTCGGTTTTTGTGTTCTTT
TTGCAAATAAAttattgatgaaaaaatattgtttttgggAGAGTGTTTGG
TCTTTTTTCATGgtaaaaaataaaggagaaagAAGAGCTGGAGAGGAAAT
GAAAAAGTCTTATatttcttcatcaatttttcttttgcatTGGGAAATTC
ACTCAAAGATCTTTTTCTCCCCAAGACGAAAATGTACAACAGCGAAGTGA
TTTATTAGAAagatttctcgatttttttgccttttctTGTTTGTTGTATG
TTTCTGTCTTGATTATGAAAGACGAATTTTACCACATATTATACATTATG
AAAGTGTTATGCCTTAAAGTTACTCgagaaaaaagagattttcttTCGGT
TCTTTATATAGATATAAGGTTAACTCCAGAGATTTGCAGGCTTataaagg
aagaaatgaaataaGGCTGATAGAATTTGTTTTGAGTTAATTAAGTGAAG
AATGCTTCCTTTATTATGTTCATTTATAACTCCATATAATTCTCACTATC
TTTcagcataaaatgaaaatactattacataaaataattttattggcATG
TTTTGTTGGTTATACATCGTCCACGTGCGCCAGTTATTACACCTGTGACA
CTTGCGCCNAATGCTCAAGCGTATAGTTCAAGTTtctctttttatttaaa
gttagaaaatccttttttgtcGGTAGGTAGAGAAAGAGAGTATGTTTTTT
ATTAGCTGATGAGTACTACATCTTAAATATGTTTGAAGtctcaagttcaa
ctttttcgaatctttttagGTCTTACTTTTGTTTATACTGTGGGGGTGGG
GAAGTAAGTGAAATTGAGAGTTTTTTGTATTGATGGGAAAGTTTTGTTTG
CTGTTTCCATTTCCATTAATATGACGAATTCAGAAAAACTGTTCAATATT
TCACAAATATACTTCCAGTGTCAAATATCCTGATAGAGGAGAATATATAT
TTGAGAAATAACGAAGGGACATTGTTCTTTTTAACGTACAAAATTTTCCC
TTACTTTTCCCTAATTTTTTCGGTTTTTGTGTTCTTTTTGCAAATAAAtt
attgatgaaaaaatattgtttttgggAGAGTGTTTGGTCTTTTTTCATGg
taaaaaataaaggagaaagAAGAGCTGGAGAGGAAATGAAAAAGTCTTAT
atttcttcatcaatttttcttttgcatTGGGAAATTCACTCAAAGATCTT
TTTCTCCCCAAGACGAAAATGTACAACAGCGAAGTGATTTATTAGAAaga
tttctcgatttttttgccttttctTGTTTGTTGTATGTTTCTGTCTTGAT
TATGAAAGACGAATTTTACTACATATTATACATTATGAAAGTGTTATGCC
TTAAAGATACTCgagaaaaaagagattttcttTCGGTTCTTTATATAGAT
ATAAGGTTAACTCCAGAGATTTGCAGACTTataaaggaagaaatgaaata
aGGCTGATAGAATTTGTTTTGAGTTAAGTGAAGAATGCTTCCTTTATTAT
GTTCATTTATAACTCCATATAATTCTCACTATCTTTCagcataaaaatga
aaatactattccataaaataattttattggcATGTTTTGTTGGTTATACA
TCGTCCACGTGCGCCAGTTATTACACCTGTGACACATGCGCTGCTTACAA
AGGTTGTTATTGGTGCTCAACCTCCTCCAAATGTGAAGATTATTATGGTG
AAAAATTTGCGGACATCATCTGTCCGAATAAATGGATACAACACGATAGC
TTGTGTCCGGCTGTTGCCAATACTAATGGTGGAGGAGCAGCAGATTCTGA
TTTATTGAACCTTTTAACAAATGGAGGTCAGACTCCTTTGAACTCTCTCC
TTAGTGGAGGTGATAACTCTTTAGCTCAAGCGCAACAGACTTCTCAAGGG
AGTAGCCAAGAGTTAAAAGATTTGTTACACAAACTATTATTATTAAAGCT
TCTACGTAAAATTAAAGCAGAGGGGACGAGCTCATTGACACCTCAAGAAA
CTAAACTGCTGAGTCAGATCACCAATGTGGGTcagcagcaacaacaacaa
gtcGTTACCACGACAACAACCACGACCCAATCCCCTAACATgaaaaacga
aatcaaaaaaCTATTGAATATCTTACAAAAACAAACGGACAATAAAGCTG
GAAAAGGGGGTAAAGAAGCAGTTACTACGATGAGTCCTGGTGTTGGTAAA
ACAGCACAGAATGCAACGATAGGGAAAACGATTGCACCAAGTTCACCACC
AACTCAAAAGCCACTAATAACTGAAATCAACAAACAGAAAGCAACCAACG
AAACGGTCTTGAGTTTATTGAAGAAAATTGACGAACAGAATGCTGGTGTT
GAATACCAAGAAAATAAACCTGAATCCATTGGAAAACCGGTTGCTAAAAC
AAAACCTGTTGTTAAGACCACACCTGTTGCTAAGGTAACCAAAGCAGCCG
TTATTAAGAATGGTGTTTCTATGAACTTTTGTAAGCTGTACGAAGAGACA
GGTTTGTGTAATTCTGATCATAATTGCACCTGGTGTAACACAAAGGATGT
CTGCATCAGGAGGTCGGATACTGACTACAAAGGATGTGTGGATGCCAAGG
ACCGCATGACTGATAAAGAATTCGGTAAGTTTTTGAAAAGGGGACACACA
CTTTTGTTTTCTGTGTATTATAGTTGGGCCAGCAACCCATTTTTTGAATC
GCAAAATTCTATCGCTGTTCATCAAGGGACATCAAGGGtttcttaaggcc
ggtctccacttgcgcgcgctgtgaTCGCATATTTTCGAGCAATGCTACCA
TGCTATTggccaaaagaaaaatgaagcaattcaaTTGGCgcaatctgacg
taacggttgaaaaaagttgaaatgtgaaaactttttttcgaaggTGCGCt
agatttttatgacgtaatcttttttccaaccaaaaaggattgaagccaaa
agctGCGATCGTagtgcgcgcaagtggagaccggcctttaataAGAGGCG
TTTGCGACTGGGTGATGCTGGAGTATACCATTTTTCTCAGCggcaaaaaa
atgaagtttttctcTCGTTTTCTTGGATCAGATTTCTGAATCAACTCCCG
CACGTTATTATAATAACATCCTAaatcagatgttcttaactttttgagtt
ttaaccctgctctaaaatgttcttgttttcacaattttgtgtgTATTTTT
TATGCAATTAACTAAGAAAGAGTCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNtacaagacagtatgacacttactaccgtggtggtactgta
ttcagaagttatgaaaacagttactacacagtgtagtaactgctgtttgg
gggtggtgccaaacaaaatttgaaatttttctcagacctaactttgaaat
tatgctttccctaattatcattaaattGTTCTcgacagctgttaaccaag
taaattaaaagaaaatctagcacaaaaatggctttaggttgaaaaataat
cgcaatttagggtaatttcgagcatgcTTTTGATGATATCACtcaaaaac
aggggtggtacctggaaatcttttctgaaaacagttactaccaaggtgta
gtaactgcaaagggtggtggtcctgaaaaaaaatgttgaaaaggcactta
ctacacatcatgtcttgtagtaactgcgtgcccccctgCCATGCTATTgg
ccaaaagaaaaatgaagcaattccattggcgcaatctgacgtaacggttt
tttcgaaggtGCGCtagatttttatgacgtaatcttttttccaaccaaaa
aggattgaagccaaaagctGCGATCGTagtgcgcgcaagtggagaccggc
ctttaataAGAGGCGTTTGCGACTGGGTGATGCTGGAGTATACCATTTTT
CTCAGCggcaaaaaaatgaagtttttctcTCGTTTTCTTGGATCAGATTT
CTGAATCAACTCCCGCACGTTATTATAATAACATCCTAaatcagatgttc
ttaactttttgagttttaaccctgctctaaaatgttcttgttttcacaat
tttgtgtgTATTTTTTATGCAATTAACTAAGAAAGAGTCCTATGTCTTGC
TAAGTTTCAGAGTCTCTGAAgccttaaaacttttttttagcttttagcAT
TTTGATCTTTGAAGCCTTatcttcttatatagtttgtttttataaaaaat
gtgtagggTTGAAGTATATCTATAAACTATCCCTTatatttaatcatttt
ttctcaCCGTCTCCTTCTTAGGGCTTGACACGTGTTTGGCGATGAAACAT
TGTAAACAATGTGTTGAAAACGACAAATGTTATTGGTGTGACGTCTCCAA
AAGTTGTCATACCTACCCGTTCTTCGGCTACGTCCCTCACTCGTGCGGCG
GTGACTGGTACGTCAAACAATGTGACGTACAACTTGCCGTCATCATCATC
GTACTGCCGTTAATAATCATCTTATTGGCTATGGTCACATTTTACTTCTG
CTTGAAATATTGTTATTACCGGCGTAAAGTGTTACGAGTTCCGTTATTTG
AGAAACCCGGTGTTTTTGATTACAGAAAAGACAAAAAGGTTTATTATGTC
AATCCTGAAGATGAGAGTTCCGATACGGAATTAGCTGCGGAAAAGATCCG
GAAAAAGTATAGATTACCGGTAGAAAGGGAACCACTTATTGATCCAAACA
GTTGAGAGAGGGCGTTCtagatgtttttttgtaaatgtctGTGTGGATCG
AACGAGATAAGTTTCCACCGAGGTCTCATCGGTAAAAGCTGCAAGGAAGC
AAAATAGTTATGAATCTGGGTTTgcattttgtgttttttatgtTGTTGTG
TTGTTTCGTATGGACCTCGTGGATGAATAAGTGAATAGTTTTGTACCAAA
GAAAGACCTATCTTGTGGTCTCGTTGCTGGTTAAAATTGCCTTGACATTC
GAAAGAGATTTGGTTAGaatcaaacaaaacaatttggaaACAGACTTAAG
GCAtcgttattttcctttttggtTGTTATTAAAGTTTATCTCAAtttagc
tggcagtgttttttcagacctcaataacttttgatagaatttgaattaat
tagcggttttgtgctcgttaaaaagataatctgGAGTGGGAtattgtcaa
aaaagaaaaaaaaattaaataatagaaaattgaagatgaaaaatgaagaa
gaagaaaatcaacttcttgtagaataatgctatgatcttcatttttgtat
cagaaactcttcaatcttagaacgtcataaatACAGCTTAGAAACTTTGT
GCCCTGGTTGACTTAAGAAAGggctcttttttctttttttttgataaata
tgtttcgatggaataatttttttttcaaaattgttttaacatttatgatg
ttctaagattgaagaatcactcgtgtgaaaatgataactatgcacaatta
ttgaagaagtcgattttcttcttcttttccgatcttttttgagttttttt
ctttataacaatattccactcctgtttatcttttcaacgagcacaaaatt
gctacttaattcaaattctattaaaagttatcgaggtttgaaaaaacact
gccagctaatttgaaatagactttaagtCATGATGCGGCAacgaaaaaac
tgaaaattatgGATTTTTCAGATTAGCGGATTGAATTTTAGTTTAAGAAT
TCAtacttttttttgcattttttatttttttacatttttgcacaaattta
tttttttattctgtAAAATTAAAATTCCTCAAAGTTCCAAGCCCCTTCTC
CTATATCATTCAAGGATATGTATGATGTTGTGTTTGCCCctcatttcatt
gaaatttcttGACAGCTAGGAAATATTTGTATATATTAAAACCATTCATA
ATTGGAAAACAGGAAACTTTTCGTTCAACATTATTCAATACTTTTTCACT
TTCGAAGGcgggatttaaaaaaatattttcacgcACTCACACTGGGGTGT
CTAATGCGTCGTATTAAATAACAGTGACCTTAAGggtgcattttcatttt
ttagacgTGTTTCTCGCAATTTGAACTCCTGGATCTCTTAGTTCAAGGAG
AAGAATATTTGTTTGTTGGCCTCCCCATATCCTGGCTACCGCGATACCAT
TTTGTATATACATTATTTTTGTTtgacaattttctttttgatatctttat
tttgtatttttgttacAAAGTTATTCATCATATATTAAGTTATTCACAAA
TGAACAATAAGAAATAATAATGAAATGTAATgcaataaaatcaataaaac
cgTATATCACATTTCCTTGGTTACTGGGTCATGCTTTTGTGTTAATCAGG
TTGCCTGGGATGAGATCATTTCTTCACTACTGATTAATGACACATAAGTC
ACACCTACCTTCACGATATTTACAATCTATGACACTCTTTCCATACCCAT
ACCGTAACATTCGCTCTGTTTTTTTCGAGATCAACTCTAGTAGCT

Coding sequence (CDS) from alignment at scaffold_109:128457..143501+

>TCONS_00046362 ID=TCONS_00046362|Name=TCONS_00046362|organism=Clytia hemisphaerica|type=CDS|length=3024bp|location=Sequence derived from alignment at scaffold_109:128457..143501+ (Clytia hemisphaerica)
atgaaaatactattccataaaataattttattggcATGTTTTGTTGGTTA
TACATCGTCCACGTGCGCCAGTTATTACACCTGTGACACATGCGCTGCTT
ACAAAGGTTGTTATTGGTGCTCAACCTCCTCCAAATGTGAAGATTATTAT
GGTGAAAAATTTGCGGACATCATCTGTCCGAATAAATGGATACAACACGA
TAGCTTGTGTCCGGCTGTTGCCAATACTAATGGTGGAGGAGCAGCAGATT
CTGATTTATTGAACCTTTTAACAAATGGAGGTCAGACTCCTTTGAACTCT
CTCCTTAGTGGAGGTGATAACTCTTTAGCTCAAGCGCAACAGACTTCTCA
AGGGAGTAGCCAAGAGTTAAAAGATTTGTTACACAAACTATTATTATTAA
AGCTTCTACGTAAAATTAAAGCAGAGGGGACGAGCTCATTGACACCTCAA
GAAACTAAACTGCTGAGTCAGATCACCAATGTGGGTcagcagcaacaaca
acaagtcGTTACCACGACAACAACCACGACCCAATCCCCTAACATgaaaa
acgaaatcaaaaaaCTATTGAATATCTTACAAAAACAAACGGACAATAAA
GCTGGAAAAGGGGGTAAAGAAGCAGTTACTACGATGAGTCCTGGTGTTGG
TAAAACAGCACAGAATGCAACGATAGGGAAAACGATTGCACCAAGTTCAC
CACCAACTCAAAAGCCACTAATAACTGAAATCAACAAACAGAAAGCAACC
AACGAAACGGTCTTGAGTTTATTGAAGAAAATTGACGAACAGAATGCTGG
TGTTGAATACCAAGAAAATAAACCTGAATCCATTGGAAAACCGGTTGCTA
AAACAAAACCTGTTGTTAAGACCACACCTGTTGCTAAGGTAACCAAAGCA
GCCGTTATTAAGAATGGTGTTTCTATGAACTTTTGTAAGCTGTACGAAGA
GACAGGTTTGTGTAATTCTGATCATAATTGCACCTGGTGTAACACAAAGG
ATGTCTGCATCAGGAGGTCGGATACTGACTACAAAGGATGTGTGGATGCC
AAGGACCGCATGACTGATAAAGAATTCGGGCTTGACACGTGTTTGGCGAT
GAAACATTGTAAACAATGTGTTGAAAACGACAAATGTTATTGGTGTGACG
TCTCCAAAAGTTGTCATACCTACCCGTTCTTCGGCTACGTCCCTCACTCG
TGCGGCGGTGACTGGTACGTCAAACAATGTGACGTACAACTTGCCGTCAT
CATCATCGTACTGCCGTTAATAATCATCTTATTGGCTATGGTCACATTTT
ACTTCTGCTTGAAATATTGTTATTACCGGCGTAAAGTGTTACGAGTTCCG
TTATTTGAGAAACCCGGTGTTTTTGATTACAGAAAAGACAAAAAGGTTTA
TTATGTCAATCCTGAAGATGAGAGTTCCGATACGGAATTAGCTGCGGAAA
AGATCCGGAAAAAGTATAGATTACCGGTAGAAAGGGAACCACTTATTGAT
CCAAACAGTTGAatgaaaatactattccataaaataattttattggcATG
TTTTGTTGGTTATACATCGTCCACGTGCGCCAGTTATTACACCTGTGACA
CATGCGCTGCTTACAAAGGTTGTTATTGGTGCTCAACCTCCTCCAAATGT
GAAGATTATTATGGTGAAAAATTTGCGGACATCATCTGTCCGAATAAATG
GATACAACACGATAGCTTGTGTCCGGCTGTTGCCAATACTAATGGTGGAG
GAGCAGCAGATTCTGATTTATTGAACCTTTTAACAAATGGAGGTCAGACT
CCTTTGAACTCTCTCCTTAGTGGAGGTGATAACTCTTTAGCTCAAGCGCA
ACAGACTTCTCAAGGGAGTAGCCAAGAGTTAAAAGATTTGTTACACAAAC
TATTATTATTAAAGCTTCTACGTAAAATTAAAGCAGAGGGGACGAGCTCA
TTGACACCTCAAGAAACTAAACTGCTGAGTCAGATCACCAATGTGGGTca
gcagcaacaacaacaagtcGTTACCACGACAACAACCACGACCCAATCCC
CTAACATgaaaaacgaaatcaaaaaaCTATTGAATATCTTACAAAAACAA
ACGGACAATAAAGCTGGAAAAGGGGGTAAAGAAGCAGTTACTACGATGAG
TCCTGGTGTTGGTAAAACAGCACAGAATGCAACGATAGGGAAAACGATTG
CACCAAGTTCACCACCAACTCAAAAGCCACTAATAACTGAAATCAACAAA
CAGAAAGCAACCAACGAAACGGTCTTGAGTTTATTGAAGAAAATTGACGA
ACAGAATGCTGGTGTTGAATACCAAGAAAATAAACCTGAATCCATTGGAA
AACCGGTTGCTAAAACAAAACCTGTTGTTAAGACCACACCTGTTGCTAAG
GTAACCAAAGCAGCCGTTATTAAGAATGGTGTTTCTATGAACTTTTGTAA
GCTGTACGAAGAGACAGGTTTGTGTAATTCTGATCATAATTGCACCTGGT
GTAACACAAAGGATGTCTGCATCAGGAGGTCGGATACTGACTACAAAGGA
TGTGTGGATGCCAAGGACCGCATGACTGATAAAGAATTCGGGCTTGACAC
GTGTTTGGCGATGAAACATTGTAAACAATGTGTTGAAAACGACAAATGTT
ATTGGTGTGACGTCTCCAAAAGTTGTCATACCTACCCGTTCTTCGGCTAC
GTCCCTCACTCGTGCGGCGGTGACTGGTACGTCAAACAATGTGACGTACA
ACTTGCCGTCATCATCATCGTACTGCCGTTAATAATCATCTTATTGGCTA
TGGTCACATTTTACTTCTGCTTGAAATATTGTTATTACCGGCGTAAAGTG
TTACGAGTTCCGTTATTTGAGAAACCCGGTGTTTTTGATTACAGAAAAGA
CAAAAAGGTTTATTATGTCAATCCTGAAGATGAGAGTTCCGATACGGAAT
TAGCTGCGGAAAAGATCCGGAAAAAGTATAGATTACCGGTAGAAAGGGAA
CCACTTATTGATCCAAACAGTTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_029596	XLOC_029596	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00046362-protein	TCONS_00046362-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00046362-exon-scaffold_109-1491911889:128457..128531	TCONS_00046362-exon-scaffold_109-1491911889:128457..128531	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1510915933:128457..128531	TCONS_00046362-exon-scaffold_109-1510915933:128457..128531	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1575043694:128457..128531	TCONS_00046362-exon-scaffold_109-1575043694:128457..128531	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1491911889:138396..139480	TCONS_00046362-exon-scaffold_109-1491911889:138396..139480	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1510915933:138396..139480	TCONS_00046362-exon-scaffold_109-1510915933:138396..139480	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1575043694:138396..139480	TCONS_00046362-exon-scaffold_109-1575043694:138396..139480	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1491911889:141278..143501	TCONS_00046362-exon-scaffold_109-1491911889:141278..143501	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1510915933:141278..143501	TCONS_00046362-exon-scaffold_109-1510915933:141278..143501	Clytia hemisphaerica	exon
TCONS_00046362-exon-scaffold_109-1575043694:141278..143501	TCONS_00046362-exon-scaffold_109-1575043694:141278..143501	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_109	supercontig	scaffold_109:128457..143501 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.28501	9.46054	3.89947	3.11667	18.2891	15.1248	23.5923	26.2162	18.6803	19.8516	16.016	19.4483	15.5227	14.8516	6.54532	7.3285	14.9478	16.541	17.8501	21.2949	17.2648	16.7446	12.2497	14.6844	13.4498	15.86	14.7188	10.9897	20.9776	21.5476

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR016201	PSI

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00046362 vs. Swiss-Prot (Human)

BLAST of TCONS_00046362 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00046362 (transcript) - C. hemisphaerica