TCONS_00046364 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046364
Unique NameTCONS_00046364
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1828

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046364 ID=TCONS_00046364|Name=TCONS_00046364|organism=Clytia hemisphaerica|type=transcript|length=1828bp
atcaaaacacgGCCCTGGGTGACAAgtttactttttgaatggttgacaat
gtttacatttttatgtGTAATGTAGGTAGAAGAAAGGTCACAGGACTGAC
AGAGTAAAGCCAAAGGAAAATCAGAGTTCTGATGATGTTACTGGCCAGTT
GAATTATTGtaagaaaaaatttataaatttattaATGGAAGCCTCCTTTT
TTGAGGGTAGAATCAAAAAAGTCACaacaacaaaatatttgaatttttga
tttgattttgattgaatAACATAACAACATGTCTGCAGTTGGTGCAGATG
CCGAGTACATGCTAGAAAGAGCTCTAGAAGAAATGGACGATATTTTTAAA
GATGGAGATCCACATCAGACACAACATCCTTTCATAAAAAACTCTAGCAC
ACCTGTACAAAATCAACATGTCAAAACACCATCAAAATCCTCAAAGAGAA
AGTCTGCTGAGTGTAGCAAGAATGTCATCAAAATGCTTGACGAACTTGAA
TTCTTTTTGTCTGGACAATTAGATGGAAGTGAaaattttatcaactctga
AGAGAAAGAAGCTATTTTAGGCTATTGTAAAAAGCTTTCCTTTGTGTCTC
TCTTCTTCAAAGAACTATTCAAGCCCTCTCCAAAGAAAAACGAACCTCCG
TTATACCCATTCAACAAGGTACACACTGACTTGAATAACGAGCTCACTTC
TACTAAACTACTACACACACAACTAACAGAAACACAAGCAGAACTTGTTA
AGACAAAGAAAAGCTTGGTAGATTATGCTAGAAAAAACGAAGAACTGCTT
GTCAGGATTACAGAACAACGCTTAGCTCAAGAGAAAACAGAGAAGgCTAA
TCACAGTGACTTATTGCTACCAGACGAAGACAATAGGGAAATGGACCAAT
TGAAAAACAGGATCGATACACTTCTCGATGAACAAGAAAAGAAACGACCT
CAAGAAGATAGTCTCTCCGGCTTGAAAGCAAGGCTTCGAGAAAAAGCATC
AGAATGCAGTCGTTTGAAGATTCAGTTAGAAGACATGCGACAACAACAAG
AAGCTAAAGATAACACTATGATCAAAATACAGGAACAAATACAACGCCTA
TTTGAGGAGAACGAGCTATTACGTCAGCAATTGGCCAGCGCCACCGCAAT
GCATTCCAACGGCTCCACCCCGCACATCGCTACACCACGAATAACGAATG
GTATGGTACCGCAAACTCCTGAATCAGTCCGCTCGGCTTCCGTTCAAAAA
TCCAAATCCAAAGAAATCCTACAGATGAAAAGCGGATTGAAATCTGCAAG
TGAACCAAATTTAAtaCGAGATGGAAACAGAAGTATTGGACTAGTTTCGC
CACCTTCGCTTTCAGTCAATGGAGATGAAGCCATATACAGACCTTTTCGG
CAACTTATATCAGACCAACCGTTCACCACGTNAGGAAAAGGAGTGCTAAC
TATGATGAACTATCTATCTTTCTTTAGACTTATATCAGACCAACCATTCA
CCACGTGGTCACTTGATCAAGTGCAAGACTGGATGCGAGATGAAGGCCTA
GAAGAATACGCCAATAATTGCTCTAAATGTATCAAAAATGGTGAAGATCT
CATCAAATTCACTTCtgcagattttgaaaaaagtctcgGCATTTCAGATC
CCATGATACGGAAGAAATTAAATCTAGCCCTCAAGGCAATAACATCGAAC
AGTCCAGATTATGCAGGCCGACTCGATCATAATTGGGTGGCACGTTGGCT
TGACGACCTTGGGTTACCGCAATACAAACAGAATTTTTATATACATAAAG
TAGACGGACGTGTTCTCGTTAATATGAC
Run BLAST on NCBI

transcript from alignment at scaffold_109:144345..160134+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046364 ID=TCONS_00046364|Name=TCONS_00046364|organism=Clytia hemisphaerica|type=transcript|length=15790bp|location=Sequence derived from alignment at scaffold_109:144345..160134+ (Clytia hemisphaerica)
atcaaaacacgGCCCTGGGTGACAAgtttactttttgaatggttgacaat
gtttacatttttatgtGTAATGTAGGTAGAAGAAAGGTCACAGGACTGAC
AGAGTAAAGCCAAAGGAAAATCAGAGTTCTGATGATGTTACTGGCCAGTT
GAATTATTGtaagaaaaaatttataaatttattaATGGAAGCCTCCTTTT
TTGAGGGTAGAATCAAAAAAGTCACaacaacaaaatatttgaatttttga
tttgattttgattgaatAACATAACAACATGTCTGCAGTTGGTGCAGATG
CCGAGTACATGCTAGAAAGAGCTCTAGAAGAAATGGACGATATTTTTAAA
GATGGAGATCCACATCAGACACAACATCCTTTCATAAAAAACTCTAGCAC
ACCTGTACAAAATCAACATGTCAAAACACCATCAAAATCCTCAAAGAGAA
AGTCTGCTGAGTGTAGCAAGAATGTCATCAAAATGCTTGACGAACTTGAA
TTCTTTTTGTCTGGACAATTAGATGGAAGTGAaaattttatcaactctga
AGAGAAAGAAGCTATTTTAGGCTATTGTAAAAAGCTTTCCTTTGTGTCTC
TCTTCTTCAAAGAACTATTCAAGCCCTCTCCAAAGGTAAAacatatgttt
ttcttttcaacgttttattttatttataattttttgaattttatgttttc
atcttcctttaactttcaTTCTAAACTTTTAGAAAGTTTCCACTaccttt
caaattcaatttatttataaaatttgtcAGCCTCTttgatatatatataa
tatagtttttcttttatgtttttaaaactctttttttatttaggCTTTTA
GCTAAACTATCTATCCATCTATATTTTAAGTATTAAAAGGTCATAAGACC
CATTATCCATGCATAGTACGAGAGACAGACAGAGACATTATTATTAAAGT
AGTTATTTTGATAACCACTGTATATAAATCTGGGCGCTGGAAATATCAAC
ATATGTTCTTCAAACAGTGCTTGCTTTAAAGTTTACTTTTAAGGTTGGCT
CATTGATTATCATCACTTTTCTTTAAGGTTTTCTTTggttaaaaatttca
agtatATACTATAGATATCACATTTTGCATTTTTCCCAGAGGCCTATGGC
TAACCATCGGCTAGACACAGGCATTGTAAAAAATGCATTTATGATTTCAA
ACATAATACTTTCTTATAATTGACATATATACATTATACTAGACTAGACA
GTTTGGAATCCTTGTCCAACTGATTTTCTACAGTCttctaaaattttaag
attaattTCCCTGTTTGTTTGTAAATTTTTGCAGAAAATTGtcctttcaa
agaaaataaaatgcaAATTCTGGCTACTGTAAATTGTTGGTGAAAAGAGG
CAAactttaaactagacaaaaattgtataaaatttgctactagtactact
ggcaaaaaccggggtctttccgtagtaaacattacgtcatgaatatcatg
aattaaaggggaagaaaagaagaacataagttaatttaaaaaaagaaggg
tTAGCTTGCTTATTGGTTCTAAGAACTTCAATTTCTACAGTAACAGATTG
TTTTCCTGAATTGTAATGTTATTTTTGGTGTTTCAAGCTCTCTTATGCAG
GGGGGCTCCAAACCTGTTAAAGACAATTAAGCCAAAACAACAATAGATCT
TTTGCTAGCTAGGATGTCATGCTGAATAATTTAAAAACTCCACTCATTAA
AAACAATGACCAGTGATGCATTATTGTTTTAAGTgtgcattaattttttc
ttaccATTGTTTTGAGActagtttttaattattcaacatagACATCCTAA
CTAGCAAAAGATCTATTGTTGTTTTAGCTTAATTGTCTTTAACAGGTTTG
GAGGCCCCCTACATAAGAGGAACGAGCTCTTACCAATTTTTTACCACATC
CCCTTTTCTCCATTGAAATTCCTGAATTATTCAGTATTCTTCCCAAAGTT
TGATTTTAACAACAtaagatattttttgaaaagctatttttatcagtctt
attttaaaAGTTGTTCTACNattttttttgaaaagctatTTTTATCGGTC
TTGTTTTAAAAGTTGTTCTAATTCTTCAAGTTTGAATTTTGTATTTACTA
AAAGGCTTTTTATAACTTTGTATAGCTAcgtttcaaatttcaaagctgCT
TTTTTAAATTGAAGATTTTATCTTCAGAACtttaaattaataataatttt
tattaGTGATAGCAGACAAAAATTACCACTGTAGCTTTAAAGTTTGAGCT
ACCAACCAAACCAAAAACCAACTTTTGGAAATTCCTATAGTTCTATTTTA
TTACTTTCACAAGAGAGTATTTTAATTAGATCCCAAGAGCTATgaaatag
aataattgattaaaGTAGAGGgtaaatcaagataaaaataTAGAGGGTCC
CCTCTTTTCAAtaaattagattttaaaatgtaaaaagagAAAGGCTTGTT
CCAAATTGTAATTTAGGGCCCTTTTAGATAGTAAAAATATTATGATTTCA
TAATTTATGAgcgtttttcatattttctaagAGAATTGTTTGTTTTGTTA
ACTAATTGTTTCACCTATTCTGTTTTTAAGTCCCACTTTGCTGgatattt
gattaaaaaaagtagaacaattttggtcattttgctGTTCATCTGATACA
TATATTTATTTTGCTGATGAATTTCATGTTTCTCTAAAATTTACACTTAA
ATGATTATTGGATGCTGTTGAATAAGAAATTCTTGATTTGAAAACCATTT
GtttgaatatcaaaattttacgtgaataatcatttttgttttcaaacaaG
CTGCTGTTTTGAAGAATTCATATGACAAAGGTATATACATTGGGATCAGA
TTTTCTTAAAACTAAGTATTTTTTTAAGTGTTTGCACATTTGCTAGATTT
CTTTTCCAGTCATATCAGTATATAGTGTAAACTGTAATGTTAGTTTATTA
TATATGTCTGAAATACTACAGCAGGTTGCTTTTGTATACATGGCTTTCAT
ATAATTTCTTTGCTCTGATTTTGTGCACACCAAAGAagtttcaagtaaac
ttattaTAGTTGGCGGAAAACTTTATCTAATCTGAAAGTTTGATTACTTG
ACATTTTTCGTTTAAATTACGCAGAACCAAAACAGAGAACCAATTTGAAA
CCTGTCTATTGATGGTAAATTACTATtctcacattttgtacattttcaTT
TCAGAAAAACGAACCTCCGTTATACCCATTCAACAAGGTACACACTGACT
TGAATAACGAGCTCACTTCTACTAAACTACTACACACACAACTAACAGAA
ACACAAGCAGAACTTGTTAAGACAAAGAAAAGCTTGGTAGATTATGCTAG
AAAAAACGAAGAACTGCTTGTCAGGATTACAGAACAACGCTTAGCTCAAG
AGAAAACAGAGAAGGTTGGTCCCTCCTTGGAGGGTCTTTTTAACTTCTTG
CACTTccttcacaatttttttgcacCCTGCATGacttgcacctattcttc
atgttttgtttttgtcaaaTGTTGTGAGCTGTTATGTGTTTGTTCTGTAA
TTATTGATCGTTTAGTTAGTCTATACAGTATGTTTGTCAACAGGTCTAAA
AACAGAAAGGGAGgctctgatattttgaaataatttacaaaatattCTGA
TAAGATTAAGAACGCGTTAGTGCTATTGGAGTTGACCTTTCTCATGTGTG
TATCAAGAAAAGTTAGAACCCTCTTAGGGGTCAATTTAAAAGGGAGATCA
GACCCCTATTCCTCAATGCCAATGTTTACTACCTGGATATTGCGCTGCCA
TCGAGGCAAAAagtccaatctcaaaattagtgtctgagaaaactaaaaaa
aattctgtttgGCATAGTGTTGGGGGCCCATCTACAGTACTTGAAAAAAG
gatcaatctcaaaatttaaggtAAGCTTTTATAGCAGAAAAATTCTTAGT
TTTCTCATacactaattttgagattggaccttttgcCTTGATGGCAGCGA
TATATAGGCAGTATTTGATCTACACAAGGCAGAGAAATTCCCTAGCAGGA
ATAGgaatggttttgtttttatgaaattgtgttttttcatttcatcattg
gATATTCTTGAACTCTCATGACAATTatcctaaaatgttcttaaggtatt
cttaggttaggatccaaaGTCAGCCTGaatttaacatgtaatacaTACCT
GCAGCATAAAGtgccatttttttgaaagtttttggagAAAATTGGTAATT
ACAGTTAAAattgctctaaaaatgacattcctATGTTCTGTGCCACATTC
CATCATTGTAGGATATCATGATAACATAGCATTTGCTTAAATATTTAGCC
ATTTCTATCATGAATagtacttttttcaaaaagcatgTAACCAGTCACTA
GCTAGTGAAGATACTAGCTTCTTGGGAGACCTACctttatttaatttcaa
aacttgTAGTTAAagtgaaaataacatttttctgAATGTAAAGTTTAGAT
ATCCAGGCTAAAAGTTTCCCAGTTTTTGTATGTTTTACTAGCAGAGCTGA
GTCCTCTGTTCACTAAGTCTTGCTTTCCTAAACATTTTGACAGATGAAAT
TCAGTaattttggaaaacttttgaacttttgccccccccccctcaaaaag
GATGGCCAAAAAGGTTAAAAGAACTCGAATGATATCTTAATAGTTTTCAA
TTCATGTCAAATTTTTGTGTTCTtgttctgttcttataaaaagtatgCAT
TCTTTTCATGTTCTTTTCCACTGTTTTCCAAAATATAGTTAATTTGAATG
AATTCCCATAGTTGATTAAGTTTGTCCAGGTTTGtcctatatttttatta
caccTGAGCAGTTAGTCATTTGCTAAACATCAATAGGGTTAAAGGTGGGT
ACTTTGAGGGTACTTGCTTAAAAACTGTAAGGATTCACCCCTTCACCCTA
TTTAAAGTACTATTTTTACTGAGACTGTTTCCTATTTTTTCTTCACTCAT
TCGTATCCTATACTATATTTGCCAAATAATTTTGTGATATAAATGTTATG
TTACAGatgtatttttcatttatttgacTCTTTCCCTTCCctttcctttt
cttttcttatttttttcatttttttctgttcatTGACTTTTCATGATATA
ATATGACTACTTGAAATCTAAAAGAGATGAAGCATGGAGTAGGGAATATT
GATAAGTTCTTCCTCCAAAGTTTGCTCATGTGGcaataatatttatttac
aaaagtttacttttctttttttttttggtttggtGTTTGGTTGATCAACT
TGAATGGTTTGGAAAACTCAGTTCCTATTTCAGAACATTTTTTATacaat
gaatattttttgtgtAGTGGGCTGTAAAGTAAGTGGTTTATTTCTCTTCT
TGCTGTTTTTGCAATGAATAAAAGTTTAAGCAAGGTAACTTCTTGCAAAG
GAACTGCAAAAGTGACACACATGTCATGTCAGAGCCAAATCAGCCGAAAG
GTTTGCAAAGGTTGGAGCTTTTTTATGACGTTTTAACGATGCTTTTACGA
CCCTAAGAAACATTAATTCTTCCAACAAAGTTTGAGCCacaatattgaaa
ttttttaatcgagATGTTTTCAGAATCTATGACCTTTTCAGTGATTCAGC
TCTATTTTGTCTGTTAAGAAATTGTATTTacacgattttttataagaaca
aactatataagaatatatgtcttctatggccaaaatattaagaataagtt
aagaacattctaaggctttgtggacttttagcactcaatttcttaggaaa
atggacaaatatactcaaaatgatgaaaataaaaacatgtaaagaacatt
tttaggctcagaACTCAAAAAGGTAAGGACATCCAAAGGCTAAtgttttt
ggatgttcttataaaaaaagcatctATCAGATGAGATTTGCTTGTGTTTT
GACTGAGTAAAAGGAAAccaaaaatctccaaaaaattgaGACAATCTATA
TTATccaattaaaagcaaaatcagaaaaagtcaTAATAGTCAAAACAATG
atgtttttgccaaaatttacccaagtgatttattgatttatactcttttt
tataagaataatttcataagaacaatgaggcagAGAATAACCAAAAAATG
AGAGTCAGAAAATTAACAGTCAATTATACACTCTTTtcgttttataaaaa
caaaagtgaggctcaaaatggccaaaaataagaacagtttcacttttttc
gttttataaaaacaactcacttttgtttttataaaacgaAAAGAGTGTAT
AATTGACTGTTAATTTTAAAAGCAGGTTTatgaacaatgctgagcctgga
attactcaattttaagCAATTAAGGGGTCAAACTCAAAGCAGTAAAAACT
GGgtataaagcctaaaatacctcaatttcaccctttaaaataagaacagg
atcgAGGCTCAAAgtgcgaaaaaataagaacagccgagcctcatcaGATT
AatctactggttcttatataaaaagagTATAAAAAATGTAATATGAAGCC
TGAAATGTGGCTCTGAAAAATTACAGGATAAGAATATTTTGTGCAAAAAC
AACCTGAAACAAATTTTTACTGGATCTTCTTTACAAAAGAAGAAACGATG
AGGATGAGGACCCTGGCTAAAattcatgttgaataatttgtCCTTGTAAA
AGTTCATCATATGTTCTGATGATATGTCAAATGCTTATCCGAAAGGGCTT
CACAGCTCCTTGTCAAATAGTTGATCCGTCTCTTCTCTCTCATCCTTCTT
GTTCATCTTTCGTGAAATCATTCAAGTCCATCTTTGTCTCTCTCACTAAT
CTACTCACATATATTTTATAAGGATTTGttaaagtgcaatttttttaaat
ctatcatAGCCGAGTGGTTAAGAGACTTTTTCTTGTTATGGGATTTCAAG
TCTAACTGTTTATAAGGTCTCCACCAACCAAAATGATCATTGCCTAGATG
TATATTGTGGATCAACATTTGATAGTCAAAATGagattttgttcttataa
aaggttgACTGATTGGTCATGAGAGCAACTTGAATCAGTCTTGGTTTTAA
AAAGAAGCTAAGTTGTGTCTTTGTATAAGATTAAACTTTTACGCTTTAAT
CAGCTTCAAGAAAGAGAGGTTTCCTTTCCCTATgacttttgaaaacaaaa
atcattTCAAGAGAGACACGAAAAAAGACTGAGGGTCGTCTTCTACTTTA
ACAGTCAAGAAATTGTGAATTGAGGTTGTAAAGATTCGCTGTGGAGATAA
tcgttgaatattttttaatttgaaggaGAGCTTGAGGTAATGGCAATTTT
GGATAGTGCATGCTCTGTACCAATGtttctaaaaataatttttttgattg
attaTACTTTATGATATTTGGGTTGGGCTCGAAGTTCATGGTAATTCATA
GAGGTTACACAATCAAATGCGACCTTTAAATTGCCTGGGTTAAAAAATTC
CAATGCGATTTTTAACGGGGAGGGATCACAAAATATAAAGCTTTGCTGAC
ATCCTATTTGGAAAGTACGAAGTTTGTTAAACCTTTTTATCTGAGATGTC
TTCATAAATGATAACCTATTTAAGCCCTTCATAAATTACTGTAGTTTAGA
TCGCAGTTATGAACCTTCCCAAAACAGTTCTGAGATGTCTGACATTCTTT
TCTAATGATGAAAACGCTCATAAAATTGTTTGAGGttatttaatttaatt
aaaaatcaattaagAGAGATTGAAGTTTGTATTGTTTCTACCTTTAAGCT
CCTTACAATCTCCTTTTTAAACGAAGGCTAATTGAAAAGAGAAATGGACG
AAGTATCTGAATGCTATGTTTCATTGTTTGTACTATAACCTTCTCTGCAT
TTTGTTTGGTGTGTGTTCAGTTTATATGTGTATTTCTATGTCTTGTTTGT
CAATATTGATTGTAGTGATTGCTTTTGTTGGTCTTGTAAATAAAACGTGT
TtgaattaatcaatttttgcaTTTATATTTTTCGTTGATAGTTTTGTATG
TAGGTTTACCCTTTACCATGGGCCTTGGTATTCATTATTGGATCATTGAT
GGACTATTGGAGGGATGTAGATTGTTTTGATTAGATCGAATGATAAACTT
ACTCTCTTTCACATCTATTGGATGCAGTCAGGTCTGAATCTGACAAAGTG
AATTGCCATTGGGAACCCAGAATTAGAACTTTGAATATATCCATCATAAA
TACTAAGAAGGTTTGCAAGGGGTTGCTATTGCTAAATATTCTGGAAGTAT
ACATACGCTGTATACAGATGGGGTTTACTTTTTGTGCTGAGGTTAGAGGG
GTTTTGCCCACTACGAGATGAATTGTTATTGATTTTGTAGTATGCTACCA
TGACCAGATTCTCAATGATTCACTTGGTTTTAATATCCCAATGATTCTTT
CTTGTTGGCATTTCTAAAGTATcgctttcaactttttcatttcaACGCTG
CAAAAATACGATAGTTTTTTATTATTACCTTATGCCAGACAATTGATAAT
TAGCTCGCAAAAGTTGCTTTAGAATGGCAGTTATACAttgttttttggaa
aacattccCTTAAATATACAACtcagataaaaaaagaatgtcgACTCTGC
TTTTAAAAGGGTTCCCCTCTTTTTGCCACCCTTTCTGGATACGATTTGCA
ATCCCTCCTCTCTTTTCCGCTTCCATGCTTTGGAGGGATCCATTCAAGTG
GGTAGCACAAGTTGTTTAAACTAAGGGCTTCGTTTACCGCCATTCAGAGG
TTAATGGACCAAAACTTGTAGATGACGCTGTAGAAATGTTACCACTTTGA
TTACACCAAGAGAGGGAAGGAAAGAGAGAGAGAAGGAACAGTATAAATGT
ATTACAATAAACTTAATACGACCATAAAGAGAACTATTAAAAAGTACATT
AAAAACAACTGAATAATATAGAGAGTTCTAATGGTGAGAAAAGCAATACA
GTTTTATTATCAAGCGAGATATAAACTGTTTCATTTGAGGTTCTCgccat
tttataatttttacttgttcttatttttttccaaaactttctccTTGTAA
GCGAATATAGATCAATGTATGGTGGAAGGAAAAGCGCTTCGtgatatttt
ggtgttttggtttTCGTCAATATAAAGAATATTAACTCCTGAGGGCTTTC
CTTGTTTCATTCAGGCTAATGTTTGATTTTGCCTATTACTGTACTTGTGT
TTTTTTCTGTGTAGTTATAAATTCCATTCAGAAATTTTTTGCAGTCAAGT
TTCATGGAATTGTGCTTGGTTTTCCTTAACTGACAATCGATCTAACCTGA
ATTTTAACTGATTTTAACCTCTTTTGTTATTTGTTTGCACGTACGAGCCT
CTCTGAAACTTTCTACTTAAAACTATCGTTGTTTTTTCAAGAGAATTATT
ACTAACATTGAAAATAATCTgcgattttcagaaaaatgacAAGTTATAAG
CCACGACGAACAAAGGTAATACCCAGGCTTATGCATTTTAAGTTTTGATG
TTACACAACTATCTTGTACACTATACTTATGATTTTTGTCTCTTTCAAAG
CAAGCTGATATTATAGTACGTGATGTCTGTGTGAGTTATTATGTTTGAAC
tttcaaagcaaaataaaaaaactcgaATTCTTCGAGTTCTACTATTTGTT
TGGTTTTCAAGGTCTATTTACCTTAAAATAGTATGTAAATATTGTAAATA
ATTATAAATGTTGTAAAAGAGGAGAGGTTTTgagatgttattatttttga
gGTGATTTCATACGTGTTAGTTTAAATTTTAAGTATTGAAGAGCTGTCCT
GAGTTAATTTATGTAGGTGATATAGATGCCAATTTGTCAAAGTGAAACCT
GTAATACATAGTTTCATagtcttgggttttgatgaaccaaaagcaagggg
ggtgttaaaagtatgaAGTATGACTTACCTAAAGGGGGATTGCCAGTTAA
GGGGGgtcttcttacctaagggggggtcttcttagataAGTTAGATAAga
tcttccttgaattatgcaaaatttcaatcttttatttatactgattttct
aagggaaaattttaaatgaatttcctaagggggggggggtcctcttacct
aagggggggtcttcttagataAGTTAGATAAgatcttccttgaattatgc
aaaatttcaatcttttatttatactgattttctaagggaAAATTTTAATg
gaatttcctaaggggggggggtcctcttacctatgggggggtcttgaccc
ctctagaaactatgttAATAAGAATTTTTGTTTGTATCTTTGACTAGACG
CCTCAAATCGTAAACGAAAGAGAATAGAGAAGACAGGCTAATGAAATATT
TAAGTCGGACCAGCCTATCTATtccctttcaaataaaaaatagaatatGT
CCACATTATTTGACGACAACAGCCTGCAAACCAACAAGCTTTATAAATAC
ATAATTTATATGAACAGGATTTgtcttttttctcctttcaCGTTCGATGT
CAACGAATGCTCAAAGCTAGATTGATGACTACAGATAATGACGTGAAGTT
TTAAAGTCTTTGCTTTTCGGAGATTCTCATATGTTATAAAGATGTCGAGC
TTCTTTAGTTTAAATTCCATCCGCTTTTTATTGGTAGatatcattttttc
aaattctttatttttcaatgcGATCATGAATGttcattttggcgggaatt
ttatttttgggaGAAGGACTTGTTTGGTTGTTTCAAGAAGAAAAAGACTG
ACCAAAAATACGAGTAATAGACCAAAAGAAGGGNAGGACTTGTTTGGTTG
TTTCAATAAGAAAAAGACTGACCAAAAATACGAGTAATAGACCAAATGAA
GGGATTTTCTAAAGGCTCATTAAGAATTTCGAGatccaaatcaaaacatt
gtaGACGTGATGTGATTTTCTTATTCCATCCTTCATAATTACACATCTAT
AATTTGAGTGAATGAGTAGTCAGTTAAAAGATTACAAAAAGATAGATTTT
ATGTTAAGATAATGTTTAAAAACGACCGAGTGTTCTTATATTATCATTTT
GCACATTCGCGTAATTGATCTAAGAGACGCgtttaaagatttttgtgtTT
GAAACGCTAAACTCAAGCTTGTAAATGTATATATCTTCAATACTTCAGGA
AAGCGAGACATATGTCTGCTATCACATCAACTTACGAcaagttatttttc
tttataggCTAATCACAGTGACTTATTGCTACCAGACGAAGACAATAGGG
AAATGGACCAATTGAAAAACAGGATCGATACACTTCTCGATGAACAAGAA
AAGAAACGACCTCAAGAAGGTATGCTGATCTTGGGTGTCAGTTTTTTTAG
GGGAGGGGGCTGTCTAGAGGGAAAATATCTCAGCTCGATTATACATGAAA
GTGGGGCAGTTGTCTGGTTTGGACGTGTCTCATTTTTTGGGCAACAATCA
GCTTTCATTTCTTTAGTATGTACACTGAAATGTGGTTGAAAtggcataca
cgttttttttataagaacaaactatataataaaTTAAGGCTGCGCTGGAT
AAAATGTTAAgatcaagttaagaacattttaaggctttgtggccttaaaa
acaccctatttcttggaaaatggtcaaaaatattcacaaaataaggtcta
aataagaacatgtttagaacatttttaggctttaaactcaaaaagttaag
aacataagaaggcttcaaaaattttggatgttcttataaaaaaacgtgta
gtggtatagtggtcatcaTCCTTGGCTCCCGCCTGGGAGGCCCGAGTACG
ATACTCACCGTGTCACTACGATTCACTCGACAGGTGAACGTACCTTCACC
CGTGTCAACCCATGCTATGTGTGGGGATTCGGGTACCATTACTCTGGTAT
GTGTGGGTAGGCTTGGCTCGACTCGAGTCGAGGCTCGgctcccagtgtcg
ttcgagttTCAAGATGTACAGCATGGCTTGGtagtgtctgtcagcgccgt
gattcctactctTTCTGGAGTAGAACCCATCCCAAATGCATTCGGAAGGC
TCGTATCTATCTATCTGTGGTTCAAATTTTGTTAGTTTTCAATGATGATA
TTTTTTCTCCATCTACCGTTCGCATGTCGAAGTGTTGTTTTTTGCtatcc
ttttttacactttaCGATTAGCATAATGCTAATAGATTTTTCGCACCTTA
TATTTTCATATAAACATACCTTGTAATTTCCTTATCAAATTTTCACCCAA
TGAATGGTCGTAAGTTTTAAATCCCTCTCAGTGATAATAAATAAGCTTGT
GCTAGATGTTTTTGTAACTACAGTATTTCGTTAGTTGGGTTCACGAGGAG
AAAAATATGGATGGAACTGATGATGGTAATCTTTTCTGCGTCTGCGCGTT
GAGTACTTTTCgttgatttcatcatttttgtaTTTAACCTAGCAGGTATT
TTGATCGAAAGAAGAATTTtcatgaatgtttttttttgtttctctttTCA
GATAGTCTCTCCGGCTTGAAAGCAAGGCTTCGAGAAAAAGGTAGGAAATG
ATGATCATGATGGAGACTTATTCATACTGACATTGTATTTGACAAGAAAA
TCAATTCAGACATACTTCTATACTATCAGAATAGGATatttaatttgatt
tgaatttctAAATAATACGTGGTTTAGAAAATTCGGCTGTTAGTACTAAA
CTATAAGACTGTCTCTCTAAACATCCTAGTTATTCCGATATAACGGAATA
ACCAGTCACGGCCAAAACTTTCAGGTTTTCAatgatcttttctttctttc
ctaAAGAGGTTTATGTTTTGTTGAGTTACGTAATTTAAAGCATTATTGAA
GTAAACGTTTGAATGTGAAGAGGCGACCCTCCTTACGcgaatcgaacgtt
tgcttccataacgACGGAAGTTatgtaacttaacaaaacacGTAAAATCT
CTATACCAAAAAGACGTTCAAAGATAAATATTTCCGATTTCCTACACCTC
CAGCATCAGAATGCAGTCGTTTGAAGATTCAGTTAGAAGACATGCGACAA
CAACAAGAAGCTAAAGATAACACTATGATCAAAATACAGGAACAAATACA
ACGCCTATTTGAGGTTTGTCTGCTATTGATTGCTTATTCAAATATTCCAC
TGCACTGGTCAGAAGCAGGGGGGTCAGTATAGAAAGAAATCTagcaattc
aaaaatttttattaccaAAAGAATAGTTTCAAGTTCGAAGAGACCCTCGT
TTTCAGCTTCAGAGTATCATGCCATTCAAGACATCATTTAACCATTTTCT
TACGCAGCGTATATAGAGGCGCACCTCCcttctatatcataaaaaagaaa
atctttaagacgaagtttaagtctatactatACATCGGTATTAAATAATA
ACAGTTTCAAATGAATCTCTTTCAAATCTCTTTCAAATGAATTCCTTCGT
TTCCATAGGAGAACGAGCTATTACGTCAGCAATTGGCCAGCGCCACCGCA
ATGCATTCCAACGGCTCCACCCCGCACATCGCTACACCACGAAGtaagtg
aagaagaagaagatctaAGATTACTGTTTTGGTTTATCTTCGTTGACTTC
TTGACACCAGAAAAGAGCTTtataacaatgccttataagtGATAAAAAAT
CTATGAATAAGGCTGGACTTGACAGCAAACCAAAATTTTTCCCCAGTCAG
GTCCAGTCTAACTCGAATCCTTGTAGTAAAATAAAGATTAAACATTGtta
atagtttgttcttttattaGCTTTTTGAGCTCGTATTAATATACTGACTT
TGCTTTTCTCTTTCTCCTTCAGTAACGAATGGTATGGTACCGCAAACTCC
TGAATCAGTCCGCTCGGCTTCCGTTCAAAAATCCAAATCCAAAGAAATCC
TACAGATGAAAAGCGGATTGAAATCTGCAAGTGAACCAAATTTAAGTAAG
TTTTTTTATCACTATAGACAGCTTTTAATGTTGATCTGAGGTTATGGATG
CACTGTAGTAGCCTGTTCACAGAAAAGACTTAATGTCGGTTTCTGGCACT
CTTgtaactttcttttctttttatattttcagtaCGAGATGGAAACAGAA
GTATTGGACTAGTTTCGCCACCTTCGGTAGGTTAACCTAAAATTATATTC
TTTACTTTCCTACCGCGCGATTTCTTTATAAGTTTGTTGGTCTATCACAC
GGTCTATTACGCGTTTGCTTTTTTATCGCAATTATGTCAAATCCTTGATA
AAGACTGCAATGACTTACTATAAACGACGTCAATATATGTAAAAAGTTTC
AGACGGAATGGAATCGAGAATTAAAACCTGTGTTCTTGACCGTGTTACAG
GCAAGGCTACGAACCACGATTGTTATTTCATTAGGTTTTACGACCCCACA
CAAAaccattttttcattatttctctATTGTACAATCAGTGATCAAAGCA
gatcaaagttcttccgtctcagacggatttccgtctcacagaaatttttg
tcaaagttttccaCCTTAGTTAGAAATGGTTTTATTTAGCAAGAAATAGT
GATTTTTGATAGATATTTATTTTCGCTGTATGATAggcattctaagaaca
ttctgagTTGTTTTAATAAACAAATTTTAGTGCCTTTCTAGCCAATATag
ggggtaaaaaattttctgtctcatagaaaaaaaaatgcttTGACCACTGT
ACAATATATCAGATCAATACCTAGTTTGATTCATTTCCTGgccttttttt
tatcttcacgTTATTGCTTCTTTTTAGCTTTCAGTCAATGGAGATGAAGC
CATATACAGACCTTTTCGGCAGTAAGATTCATTCCTTTTTCAATTTACGA
CACTATTTCTTCTTTATCTTTTGGATTCTCTTACCTTAACTAATATAATG
AACCGTTTGTGTTTTTATCCTATGAATCTATTATCATTGGCCTTGTTATA
TGAATAGAACAATACCTTTTGTATTCTTCTCTTTTCTTGTTTCTTGCTAT
CAAGCCTCTGCCCCCTCCCTAGGAAAAGGAGTGCTAACTATGATGAACTA
TCTATCTTTCTTTAGACTTATATCAGACCAACCGTTCACCACGTNAGGAA
AAGGAGTGCTAACTATGATGAACTATCTATCTTTCTTTAGACTTATATCA
GACCAACCATTCACCACGTGGTCACTTGATCAAGTGCAAGACTGGATGCG
AGATGAAGGCCTAGAAGAATACGCCAATAATTGCTCTAAATGTATCAAAA
ATGGTGAAGATCTCATCAAATTCACTTCtgcagattttgaaaaaagtctc
gGCATTTCAGATCCCATGATACGGAAGAAATTAAATCTAGCCCTCAAGGT
ACGGACTACTTAAATTAAAACTAAATGTCAAAAACACTTGTCACTGCCCG
TTCAGCCTCATTTTATCGAGCTATTTTTGAtaagaatgtttttatatgaa
ctTCAAGAGATTTTCATCGAGAGGCTCAGTTCTCTAGGCGTGaattactt
ttgtttttttgctacAAAGTTTTTCAATATATGTTTTCCTTATTAAGGCA
ATAACATCGAACAGTCCAGATTATGCAGGCCGACTCGATCATAATTGGGT
GGCACGTTGGCTTGACGACCTTGGGTTACCGCAATACAAACAGAATTTTT
ATATACATAAAGTAGACGGACGTGTTCTCGTTAATATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029597XLOC_029597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046364-exon-scaffold_109-1491911889:144345..144979TCONS_00046364-exon-scaffold_109-1491911889:144345..144979Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:144345..144979TCONS_00046364-exon-scaffold_109-1510915933:144345..144979Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:144345..144979TCONS_00046364-exon-scaffold_109-1575043694:144345..144979Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:147599..147808TCONS_00046364-exon-scaffold_109-1491911889:147599..147808Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:147599..147808TCONS_00046364-exon-scaffold_109-1510915933:147599..147808Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:147599..147808TCONS_00046364-exon-scaffold_109-1575043694:147599..147808Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:155652..155763TCONS_00046364-exon-scaffold_109-1491911889:155652..155763Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:155652..155763TCONS_00046364-exon-scaffold_109-1510915933:155652..155763Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:155652..155763TCONS_00046364-exon-scaffold_109-1575043694:155652..155763Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:156946..156984TCONS_00046364-exon-scaffold_109-1491911889:156946..156984Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:156946..156984TCONS_00046364-exon-scaffold_109-1510915933:156946..156984Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:156946..156984TCONS_00046364-exon-scaffold_109-1575043694:156946..156984Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:157448..157557TCONS_00046364-exon-scaffold_109-1491911889:157448..157557Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:157448..157557TCONS_00046364-exon-scaffold_109-1510915933:157448..157557Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:157448..157557TCONS_00046364-exon-scaffold_109-1575043694:157448..157557Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:157903..157987TCONS_00046364-exon-scaffold_109-1491911889:157903..157987Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:157903..157987TCONS_00046364-exon-scaffold_109-1510915933:157903..157987Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:157903..157987TCONS_00046364-exon-scaffold_109-1575043694:157903..157987Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:158267..158389TCONS_00046364-exon-scaffold_109-1491911889:158267..158389Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:158267..158389TCONS_00046364-exon-scaffold_109-1510915933:158267..158389Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:158267..158389TCONS_00046364-exon-scaffold_109-1575043694:158267..158389Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:158527..158570TCONS_00046364-exon-scaffold_109-1491911889:158527..158570Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:158527..158570TCONS_00046364-exon-scaffold_109-1510915933:158527..158570Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:158527..158570TCONS_00046364-exon-scaffold_109-1575043694:158527..158570Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:159222..159265TCONS_00046364-exon-scaffold_109-1491911889:159222..159265Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:159222..159265TCONS_00046364-exon-scaffold_109-1510915933:159222..159265Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:159222..159265TCONS_00046364-exon-scaffold_109-1575043694:159222..159265Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:159510..159792TCONS_00046364-exon-scaffold_109-1491911889:159510..159792Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:159510..159792TCONS_00046364-exon-scaffold_109-1510915933:159510..159792Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:159510..159792TCONS_00046364-exon-scaffold_109-1575043694:159510..159792Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1491911889:159992..160134TCONS_00046364-exon-scaffold_109-1491911889:159992..160134Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1510915933:159992..160134TCONS_00046364-exon-scaffold_109-1510915933:159992..160134Clytia hemisphaericaexon
TCONS_00046364-exon-scaffold_109-1575043694:159992..160134TCONS_00046364-exon-scaffold_109-1575043694:159992..160134Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:144345..160134 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.50873e-05	0	0.000673817	0.338339	15.0681	13.1537	5.88902	5.57773	0	2.19169	1.17101	2.45428	0.86018	1.57826	0	0	0.29603	1.0526	4.69829	0.0864848	9.63919e-06	0	0	0	8.15272	6.8173	2.92349e-07	1.31314e-07	0	0
Blast
[Close]
BLAST of TCONS_00046364 vs. Swiss-Prot (Human)
Match: LIPB1 (Liprin-beta-1 OS=Homo sapiens GN=PPFIBP1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.568e-26
Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 3 
Query: 1488 DQPFTTWSLDQVQDWMRDEGLEEYANNCSKCIKNGEDLIKFTSADFEKSLGISDPMIRKKLNLALKAITSNSPDYAGRLDHNWVARWLDDLGLPQYKQNFYIHKVDGRVLVNM 1826
            D PF  W+ +QV +W+ ++GL  Y N+    I +G+ L++ +  D EK LGI   + RKKL LAL+A+ S      G+LD NWV RWLDD+GLPQYK  F   +VDGR+L  M
Sbjct:  641 DMPFAKWTKEQVCNWLMEQGLGSYLNSGKHWIASGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYM 753
The following BLAST results are available for this feature:
BLAST of TCONS_00046364 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LIPB12.568e-2646.90Liprin-beta-1 OS=Homo sapiens GN=PPFIBP1 PE=1 SV=2[more]
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