TCONS_00046365 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046365
Unique NameTCONS_00046365
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1606

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046365 ID=TCONS_00046365|Name=TCONS_00046365|organism=Clytia hemisphaerica|type=transcript|length=1606bp
CCCTGGGTGACAAgtttactttttgaatggttgacaatgtttacattttt
atgtGTAATGTAGGTAGAAGAAAGGTCACAGGACTGACAGAGTAAAGCCA
AAGGAAAATCAGAGTTCTGATGATGTTACTGGCCAGTTGAATTATTGtaa
gaaaaaatttataaatttattaATGGAAGCCTCCTTTTTTGAGGGTAGAA
TCAAAAAAGTCACaacaacaaaatatttgaatttttgatttgattttgat
tgaatAACATAACAACATGTCTGCAGTTGGTGCAGATGCCGAGTACATGC
TAGAAAGAGCTCTAGAAGAAATGGACGATATTTTTAAAGATGGAGATCCA
CATCAGACACAACATCCTTTCATAAAAAACTCTAGCACACCTGTACAAAA
TCAACATGTCAAAACACCATCAAAATCCTCAAAGAGAAAGTCTGCTGAGT
GTAGCAAGAATGTCATCAAAATGCTTGACGAACTTGAATTCTTTTTGTCT
GGACAATTAGATGGAAGTGAaaattttatcaactctgaAGAGAAAGAAGC
TATTTTAGGCTATTGTAAAAAGCTTTCCTTTGTGTCTCTCTTCTTCAAAG
AACTATTCAAGCCCTCTCCAAAGgCTAATCACAGTGACTTATTGCTACCA
GACGAAGACAATAGGGAAATGGACCAATTGAAAAACAGGATCGATACACT
TCTCGATGAACAAGAAAAGAAACGACCTCAAGAAGATAGTCTCTCCGGCT
TGAAAGCAAGGCTTCGAGAAAAAGCATCAGAATGCAGTCGTTTGAAGATT
CAGTTAGAAGACATGCGACAACAACAAGAAGCTAAAGATAACACTATGAT
CAAAATACAGGAACAAATACAACGCCTATTTGAGGAGAACGAGCTATTAC
GTCAGCAATTGGCCAGCGCCACCGCAATGCATTCCAACGGCTCCACCCCG
CACATCGCTACACCACGAATAACGAATGGTATGGTACCGCAAACTCCTGA
ATCAGTCCGCTCGGCTTCCGTTCAAAAATCCAAATCCAAAGAAATCCTAC
AGATGAAAAGCGGATTGAAATCTGCAAGTGAACCAAATTTAAtaCGAGAT
GGAAACAGAAGTATTGGACTAGTTTCGCCACCTTCGCTTTCAGTCAATGG
AGATGAAGCCATATACAGACCTTTTCGGCAACTTATATCAGACCAACCGT
TCACCACGTNAGGAAAAGGAGTGCTAACTATGATGAACTATCTATCTTTC
TTTAGACTTATATCAGACCAACCATTCACCACGTGGTCACTTGATCAAGT
GCAAGACTGGATGCGAGATGAAGGCCTAGAAGAATACGCCAATAATTGCT
CTAAATGTATCAAAAATGGTGAAGATCTCATCAAATTCACTTCtgcagat
tttgaaaaaagtctcgGCATTTCAGATCCCATGATACGGAAGAAATTAAA
TCTAGCCCTCAAGGCAATAACATCGAACAGTCCAGATTATGCAGGCCGAC
TCGATCATAATTGGGTGGCACGTTGGCTTGACGACCTTGGGTTACCGCAA
TACAAACAGAATTTTTATATACATAAAGTAGACGGACGTGTTCTCGTTAA
TATGAC
Run BLAST on NCBI

transcript from alignment at scaffold_109:144357..160134+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046365 ID=TCONS_00046365|Name=TCONS_00046365|organism=Clytia hemisphaerica|type=transcript|length=15778bp|location=Sequence derived from alignment at scaffold_109:144357..160134+ (Clytia hemisphaerica)
CCCTGGGTGACAAgtttactttttgaatggttgacaatgtttacattttt
atgtGTAATGTAGGTAGAAGAAAGGTCACAGGACTGACAGAGTAAAGCCA
AAGGAAAATCAGAGTTCTGATGATGTTACTGGCCAGTTGAATTATTGtaa
gaaaaaatttataaatttattaATGGAAGCCTCCTTTTTTGAGGGTAGAA
TCAAAAAAGTCACaacaacaaaatatttgaatttttgatttgattttgat
tgaatAACATAACAACATGTCTGCAGTTGGTGCAGATGCCGAGTACATGC
TAGAAAGAGCTCTAGAAGAAATGGACGATATTTTTAAAGATGGAGATCCA
CATCAGACACAACATCCTTTCATAAAAAACTCTAGCACACCTGTACAAAA
TCAACATGTCAAAACACCATCAAAATCCTCAAAGAGAAAGTCTGCTGAGT
GTAGCAAGAATGTCATCAAAATGCTTGACGAACTTGAATTCTTTTTGTCT
GGACAATTAGATGGAAGTGAaaattttatcaactctgaAGAGAAAGAAGC
TATTTTAGGCTATTGTAAAAAGCTTTCCTTTGTGTCTCTCTTCTTCAAAG
AACTATTCAAGCCCTCTCCAAAGGTAAAacatatgtttttcttttcaacg
ttttattttatttataattttttgaattttatgttttcatcttcctttaa
ctttcaTTCTAAACTTTTAGAAAGTTTCCACTacctttcaaattcaattt
atttataaaatttgtcAGCCTCTttgatatatatataatatagtttttct
tttatgtttttaaaactctttttttatttaggCTTTTAGCTAAACTATCT
ATCCATCTATATTTTAAGTATTAAAAGGTCATAAGACCCATTATCCATGC
ATAGTACGAGAGACAGACAGAGACATTATTATTAAAGTAGTTATTTTGAT
AACCACTGTATATAAATCTGGGCGCTGGAAATATCAACATATGTTCTTCA
AACAGTGCTTGCTTTAAAGTTTACTTTTAAGGTTGGCTCATTGATTATCA
TCACTTTTCTTTAAGGTTTTCTTTggttaaaaatttcaagtatATACTAT
AGATATCACATTTTGCATTTTTCCCAGAGGCCTATGGCTAACCATCGGCT
AGACACAGGCATTGTAAAAAATGCATTTATGATTTCAAACATAATACTTT
CTTATAATTGACATATATACATTATACTAGACTAGACAGTTTGGAATCCT
TGTCCAACTGATTTTCTACAGTCttctaaaattttaagattaattTCCCT
GTTTGTTTGTAAATTTTTGCAGAAAATTGtcctttcaaagaaaataaaat
gcaAATTCTGGCTACTGTAAATTGTTGGTGAAAAGAGGCAAactttaaac
tagacaaaaattgtataaaatttgctactagtactactggcaaaaaccgg
ggtctttccgtagtaaacattacgtcatgaatatcatgaattaaagggga
agaaaagaagaacataagttaatttaaaaaaagaagggtTAGCTTGCTTA
TTGGTTCTAAGAACTTCAATTTCTACAGTAACAGATTGTTTTCCTGAATT
GTAATGTTATTTTTGGTGTTTCAAGCTCTCTTATGCAGGGGGGCTCCAAA
CCTGTTAAAGACAATTAAGCCAAAACAACAATAGATCTTTTGCTAGCTAG
GATGTCATGCTGAATAATTTAAAAACTCCACTCATTAAAAACAATGACCA
GTGATGCATTATTGTTTTAAGTgtgcattaattttttcttaccATTGTTT
TGAGActagtttttaattattcaacatagACATCCTAACTAGCAAAAGAT
CTATTGTTGTTTTAGCTTAATTGTCTTTAACAGGTTTGGAGGCCCCCTAC
ATAAGAGGAACGAGCTCTTACCAATTTTTTACCACATCCCCTTTTCTCCA
TTGAAATTCCTGAATTATTCAGTATTCTTCCCAAAGTTTGATTTTAACAA
CAtaagatattttttgaaaagctatttttatcagtcttattttaaaAGTT
GTTCTACNattttttttgaaaagctatTTTTATCGGTCTTGTTTTAAAAG
TTGTTCTAATTCTTCAAGTTTGAATTTTGTATTTACTAAAAGGCTTTTTA
TAACTTTGTATAGCTAcgtttcaaatttcaaagctgCTTTTTTAAATTGA
AGATTTTATCTTCAGAACtttaaattaataataatttttattaGTGATAG
CAGACAAAAATTACCACTGTAGCTTTAAAGTTTGAGCTACCAACCAAACC
AAAAACCAACTTTTGGAAATTCCTATAGTTCTATTTTATTACTTTCACAA
GAGAGTATTTTAATTAGATCCCAAGAGCTATgaaatagaataattgatta
aaGTAGAGGgtaaatcaagataaaaataTAGAGGGTCCCCTCTTTTCAAt
aaattagattttaaaatgtaaaaagagAAAGGCTTGTTCCAAATTGTAAT
TTAGGGCCCTTTTAGATAGTAAAAATATTATGATTTCATAATTTATGAgc
gtttttcatattttctaagAGAATTGTTTGTTTTGTTAACTAATTGTTTC
ACCTATTCTGTTTTTAAGTCCCACTTTGCTGgatatttgattaaaaaaag
tagaacaattttggtcattttgctGTTCATCTGATACATATATTTATTTT
GCTGATGAATTTCATGTTTCTCTAAAATTTACACTTAAATGATTATTGGA
TGCTGTTGAATAAGAAATTCTTGATTTGAAAACCATTTGtttgaatatca
aaattttacgtgaataatcatttttgttttcaaacaaGCTGCTGTTTTGA
AGAATTCATATGACAAAGGTATATACATTGGGATCAGATTTTCTTAAAAC
TAAGTATTTTTTTAAGTGTTTGCACATTTGCTAGATTTCTTTTCCAGTCA
TATCAGTATATAGTGTAAACTGTAATGTTAGTTTATTATATATGTCTGAA
ATACTACAGCAGGTTGCTTTTGTATACATGGCTTTCATATAATTTCTTTG
CTCTGATTTTGTGCACACCAAAGAagtttcaagtaaacttattaTAGTTG
GCGGAAAACTTTATCTAATCTGAAAGTTTGATTACTTGACATTTTTCGTT
TAAATTACGCAGAACCAAAACAGAGAACCAATTTGAAACCTGTCTATTGA
TGGTAAATTACTATtctcacattttgtacattttcaTTTCAGAAAAACGA
ACCTCCGTTATACCCATTCAACAAGGTACACACTGACTTGAATAACGAGC
TCACTTCTACTAAACTACTACACACACAACTAACAGAAACACAAGCAGAA
CTTGTTAAGACAAAGAAAAGCTTGGTAGATTATGCTAGAAAAAACGAAGA
ACTGCTTGTCAGGATTACAGAACAACGCTTAGCTCAAGAGAAAACAGAGA
AGGTTGGTCCCTCCTTGGAGGGTCTTTTTAACTTCTTGCACTTccttcac
aatttttttgcacCCTGCATGacttgcacctattcttcatgttttgtttt
tgtcaaaTGTTGTGAGCTGTTATGTGTTTGTTCTGTAATTATTGATCGTT
TAGTTAGTCTATACAGTATGTTTGTCAACAGGTCTAAAAACAGAAAGGGA
GgctctgatattttgaaataatttacaaaatattCTGATAAGATTAAGAA
CGCGTTAGTGCTATTGGAGTTGACCTTTCTCATGTGTGTATCAAGAAAAG
TTAGAACCCTCTTAGGGGTCAATTTAAAAGGGAGATCAGACCCCTATTCC
TCAATGCCAATGTTTACTACCTGGATATTGCGCTGCCATCGAGGCAAAAa
gtccaatctcaaaattagtgtctgagaaaactaaaaaaaattctgtttgG
CATAGTGTTGGGGGCCCATCTACAGTACTTGAAAAAAGgatcaatctcaa
aatttaaggtAAGCTTTTATAGCAGAAAAATTCTTAGTTTTCTCATacac
taattttgagattggaccttttgcCTTGATGGCAGCGATATATAGGCAGT
ATTTGATCTACACAAGGCAGAGAAATTCCCTAGCAGGAATAGgaatggtt
ttgtttttatgaaattgtgttttttcatttcatcattggATATTCTTGAA
CTCTCATGACAATTatcctaaaatgttcttaaggtattcttaggttagga
tccaaaGTCAGCCTGaatttaacatgtaatacaTACCTGCAGCATAAAGt
gccatttttttgaaagtttttggagAAAATTGGTAATTACAGTTAAAatt
gctctaaaaatgacattcctATGTTCTGTGCCACATTCCATCATTGTAGG
ATATCATGATAACATAGCATTTGCTTAAATATTTAGCCATTTCTATCATG
AATagtacttttttcaaaaagcatgTAACCAGTCACTAGCTAGTGAAGAT
ACTAGCTTCTTGGGAGACCTACctttatttaatttcaaaacttgTAGTTA
AagtgaaaataacatttttctgAATGTAAAGTTTAGATATCCAGGCTAAA
AGTTTCCCAGTTTTTGTATGTTTTACTAGCAGAGCTGAGTCCTCTGTTCA
CTAAGTCTTGCTTTCCTAAACATTTTGACAGATGAAATTCAGTaattttg
gaaaacttttgaacttttgccccccccccctcaaaaagGATGGCCAAAAA
GGTTAAAAGAACTCGAATGATATCTTAATAGTTTTCAATTCATGTCAAAT
TTTTGTGTTCTtgttctgttcttataaaaagtatgCATTCTTTTCATGTT
CTTTTCCACTGTTTTCCAAAATATAGTTAATTTGAATGAATTCCCATAGT
TGATTAAGTTTGTCCAGGTTTGtcctatatttttattacaccTGAGCAGT
TAGTCATTTGCTAAACATCAATAGGGTTAAAGGTGGGTACTTTGAGGGTA
CTTGCTTAAAAACTGTAAGGATTCACCCCTTCACCCTATTTAAAGTACTA
TTTTTACTGAGACTGTTTCCTATTTTTTCTTCACTCATTCGTATCCTATA
CTATATTTGCCAAATAATTTTGTGATATAAATGTTATGTTACAGatgtat
ttttcatttatttgacTCTTTCCCTTCCctttccttttcttttcttattt
ttttcatttttttctgttcatTGACTTTTCATGATATAATATGACTACTT
GAAATCTAAAAGAGATGAAGCATGGAGTAGGGAATATTGATAAGTTCTTC
CTCCAAAGTTTGCTCATGTGGcaataatatttatttacaaaagtttactt
ttctttttttttttggtttggtGTTTGGTTGATCAACTTGAATGGTTTGG
AAAACTCAGTTCCTATTTCAGAACATTTTTTATacaatgaatattttttg
tgtAGTGGGCTGTAAAGTAAGTGGTTTATTTCTCTTCTTGCTGTTTTTGC
AATGAATAAAAGTTTAAGCAAGGTAACTTCTTGCAAAGGAACTGCAAAAG
TGACACACATGTCATGTCAGAGCCAAATCAGCCGAAAGGTTTGCAAAGGT
TGGAGCTTTTTTATGACGTTTTAACGATGCTTTTACGACCCTAAGAAACA
TTAATTCTTCCAACAAAGTTTGAGCCacaatattgaaattttttaatcga
gATGTTTTCAGAATCTATGACCTTTTCAGTGATTCAGCTCTATTTTGTCT
GTTAAGAAATTGTATTTacacgattttttataagaacaaactatataaga
atatatgtcttctatggccaaaatattaagaataagttaagaacattcta
aggctttgtggacttttagcactcaatttcttaggaaaatggacaaatat
actcaaaatgatgaaaataaaaacatgtaaagaacatttttaggctcaga
ACTCAAAAAGGTAAGGACATCCAAAGGCTAAtgtttttggatgttcttat
aaaaaaagcatctATCAGATGAGATTTGCTTGTGTTTTGACTGAGTAAAA
GGAAAccaaaaatctccaaaaaattgaGACAATCTATATTATccaattaa
aagcaaaatcagaaaaagtcaTAATAGTCAAAACAATGatgtttttgcca
aaatttacccaagtgatttattgatttatactcttttttataagaataat
ttcataagaacaatgaggcagAGAATAACCAAAAAATGAGAGTCAGAAAA
TTAACAGTCAATTATACACTCTTTtcgttttataaaaacaaaagtgaggc
tcaaaatggccaaaaataagaacagtttcacttttttcgttttataaaaa
caactcacttttgtttttataaaacgaAAAGAGTGTATAATTGACTGTTA
ATTTTAAAAGCAGGTTTatgaacaatgctgagcctggaattactcaattt
taagCAATTAAGGGGTCAAACTCAAAGCAGTAAAAACTGGgtataaagcc
taaaatacctcaatttcaccctttaaaataagaacaggatcgAGGCTCAA
AgtgcgaaaaaataagaacagccgagcctcatcaGATTAatctactggtt
cttatataaaaagagTATAAAAAATGTAATATGAAGCCTGAAATGTGGCT
CTGAAAAATTACAGGATAAGAATATTTTGTGCAAAAACAACCTGAAACAA
ATTTTTACTGGATCTTCTTTACAAAAGAAGAAACGATGAGGATGAGGACC
CTGGCTAAAattcatgttgaataatttgtCCTTGTAAAAGTTCATCATAT
GTTCTGATGATATGTCAAATGCTTATCCGAAAGGGCTTCACAGCTCCTTG
TCAAATAGTTGATCCGTCTCTTCTCTCTCATCCTTCTTGTTCATCTTTCG
TGAAATCATTCAAGTCCATCTTTGTCTCTCTCACTAATCTACTCACATAT
ATTTTATAAGGATTTGttaaagtgcaatttttttaaatctatcatAGCCG
AGTGGTTAAGAGACTTTTTCTTGTTATGGGATTTCAAGTCTAACTGTTTA
TAAGGTCTCCACCAACCAAAATGATCATTGCCTAGATGTATATTGTGGAT
CAACATTTGATAGTCAAAATGagattttgttcttataaaaggttgACTGA
TTGGTCATGAGAGCAACTTGAATCAGTCTTGGTTTTAAAAAGAAGCTAAG
TTGTGTCTTTGTATAAGATTAAACTTTTACGCTTTAATCAGCTTCAAGAA
AGAGAGGTTTCCTTTCCCTATgacttttgaaaacaaaaatcattTCAAGA
GAGACACGAAAAAAGACTGAGGGTCGTCTTCTACTTTAACAGTCAAGAAA
TTGTGAATTGAGGTTGTAAAGATTCGCTGTGGAGATAAtcgttgaatatt
ttttaatttgaaggaGAGCTTGAGGTAATGGCAATTTTGGATAGTGCATG
CTCTGTACCAATGtttctaaaaataatttttttgattgattaTACTTTAT
GATATTTGGGTTGGGCTCGAAGTTCATGGTAATTCATAGAGGTTACACAA
TCAAATGCGACCTTTAAATTGCCTGGGTTAAAAAATTCCAATGCGATTTT
TAACGGGGAGGGATCACAAAATATAAAGCTTTGCTGACATCCTATTTGGA
AAGTACGAAGTTTGTTAAACCTTTTTATCTGAGATGTCTTCATAAATGAT
AACCTATTTAAGCCCTTCATAAATTACTGTAGTTTAGATCGCAGTTATGA
ACCTTCCCAAAACAGTTCTGAGATGTCTGACATTCTTTTCTAATGATGAA
AACGCTCATAAAATTGTTTGAGGttatttaatttaattaaaaatcaatta
agAGAGATTGAAGTTTGTATTGTTTCTACCTTTAAGCTCCTTACAATCTC
CTTTTTAAACGAAGGCTAATTGAAAAGAGAAATGGACGAAGTATCTGAAT
GCTATGTTTCATTGTTTGTACTATAACCTTCTCTGCATTTTGTTTGGTGT
GTGTTCAGTTTATATGTGTATTTCTATGTCTTGTTTGTCAATATTGATTG
TAGTGATTGCTTTTGTTGGTCTTGTAAATAAAACGTGTTtgaattaatca
atttttgcaTTTATATTTTTCGTTGATAGTTTTGTATGTAGGTTTACCCT
TTACCATGGGCCTTGGTATTCATTATTGGATCATTGATGGACTATTGGAG
GGATGTAGATTGTTTTGATTAGATCGAATGATAAACTTACTCTCTTTCAC
ATCTATTGGATGCAGTCAGGTCTGAATCTGACAAAGTGAATTGCCATTGG
GAACCCAGAATTAGAACTTTGAATATATCCATCATAAATACTAAGAAGGT
TTGCAAGGGGTTGCTATTGCTAAATATTCTGGAAGTATACATACGCTGTA
TACAGATGGGGTTTACTTTTTGTGCTGAGGTTAGAGGGGTTTTGCCCACT
ACGAGATGAATTGTTATTGATTTTGTAGTATGCTACCATGACCAGATTCT
CAATGATTCACTTGGTTTTAATATCCCAATGATTCTTTCTTGTTGGCATT
TCTAAAGTATcgctttcaactttttcatttcaACGCTGCAAAAATACGAT
AGTTTTTTATTATTACCTTATGCCAGACAATTGATAATTAGCTCGCAAAA
GTTGCTTTAGAATGGCAGTTATACAttgttttttggaaaacattccCTTA
AATATACAACtcagataaaaaaagaatgtcgACTCTGCTTTTAAAAGGGT
TCCCCTCTTTTTGCCACCCTTTCTGGATACGATTTGCAATCCCTCCTCTC
TTTTCCGCTTCCATGCTTTGGAGGGATCCATTCAAGTGGGTAGCACAAGT
TGTTTAAACTAAGGGCTTCGTTTACCGCCATTCAGAGGTTAATGGACCAA
AACTTGTAGATGACGCTGTAGAAATGTTACCACTTTGATTACACCAAGAG
AGGGAAGGAAAGAGAGAGAGAAGGAACAGTATAAATGTATTACAATAAAC
TTAATACGACCATAAAGAGAACTATTAAAAAGTACATTAAAAACAACTGA
ATAATATAGAGAGTTCTAATGGTGAGAAAAGCAATACAGTTTTATTATCA
AGCGAGATATAAACTGTTTCATTTGAGGTTCTCgccattttataattttt
acttgttcttatttttttccaaaactttctccTTGTAAGCGAATATAGAT
CAATGTATGGTGGAAGGAAAAGCGCTTCGtgatattttggtgttttggtt
tTCGTCAATATAAAGAATATTAACTCCTGAGGGCTTTCCTTGTTTCATTC
AGGCTAATGTTTGATTTTGCCTATTACTGTACTTGTGTTTTTTTCTGTGT
AGTTATAAATTCCATTCAGAAATTTTTTGCAGTCAAGTTTCATGGAATTG
TGCTTGGTTTTCCTTAACTGACAATCGATCTAACCTGAATTTTAACTGAT
TTTAACCTCTTTTGTTATTTGTTTGCACGTACGAGCCTCTCTGAAACTTT
CTACTTAAAACTATCGTTGTTTTTTCAAGAGAATTATTACTAACATTGAA
AATAATCTgcgattttcagaaaaatgacAAGTTATAAGCCACGACGAACA
AAGGTAATACCCAGGCTTATGCATTTTAAGTTTTGATGTTACACAACTAT
CTTGTACACTATACTTATGATTTTTGTCTCTTTCAAAGCAAGCTGATATT
ATAGTACGTGATGTCTGTGTGAGTTATTATGTTTGAACtttcaaagcaaa
ataaaaaaactcgaATTCTTCGAGTTCTACTATTTGTTTGGTTTTCAAGG
TCTATTTACCTTAAAATAGTATGTAAATATTGTAAATAATTATAAATGTT
GTAAAAGAGGAGAGGTTTTgagatgttattatttttgagGTGATTTCATA
CGTGTTAGTTTAAATTTTAAGTATTGAAGAGCTGTCCTGAGTTAATTTAT
GTAGGTGATATAGATGCCAATTTGTCAAAGTGAAACCTGTAATACATAGT
TTCATagtcttgggttttgatgaaccaaaagcaaggggggtgttaaaagt
atgaAGTATGACTTACCTAAAGGGGGATTGCCAGTTAAGGGGGgtcttct
tacctaagggggggtcttcttagataAGTTAGATAAgatcttccttgaat
tatgcaaaatttcaatcttttatttatactgattttctaagggaaaattt
taaatgaatttcctaagggggggggggtcctcttacctaagggggggtct
tcttagataAGTTAGATAAgatcttccttgaattatgcaaaatttcaatc
ttttatttatactgattttctaagggaAAATTTTAATggaatttcctaag
gggggggggtcctcttacctatgggggggtcttgacccctctagaaacta
tgttAATAAGAATTTTTGTTTGTATCTTTGACTAGACGCCTCAAATCGTA
AACGAAAGAGAATAGAGAAGACAGGCTAATGAAATATTTAAGTCGGACCA
GCCTATCTATtccctttcaaataaaaaatagaatatGTCCACATTATTTG
ACGACAACAGCCTGCAAACCAACAAGCTTTATAAATACATAATTTATATG
AACAGGATTTgtcttttttctcctttcaCGTTCGATGTCAACGAATGCTC
AAAGCTAGATTGATGACTACAGATAATGACGTGAAGTTTTAAAGTCTTTG
CTTTTCGGAGATTCTCATATGTTATAAAGATGTCGAGCTTCTTTAGTTTA
AATTCCATCCGCTTTTTATTGGTAGatatcattttttcaaattctttatt
tttcaatgcGATCATGAATGttcattttggcgggaattttatttttggga
GAAGGACTTGTTTGGTTGTTTCAAGAAGAAAAAGACTGACCAAAAATACG
AGTAATAGACCAAAAGAAGGGNAGGACTTGTTTGGTTGTTTCAATAAGAA
AAAGACTGACCAAAAATACGAGTAATAGACCAAATGAAGGGATTTTCTAA
AGGCTCATTAAGAATTTCGAGatccaaatcaaaacattgtaGACGTGATG
TGATTTTCTTATTCCATCCTTCATAATTACACATCTATAATTTGAGTGAA
TGAGTAGTCAGTTAAAAGATTACAAAAAGATAGATTTTATGTTAAGATAA
TGTTTAAAAACGACCGAGTGTTCTTATATTATCATTTTGCACATTCGCGT
AATTGATCTAAGAGACGCgtttaaagatttttgtgtTTGAAACGCTAAAC
TCAAGCTTGTAAATGTATATATCTTCAATACTTCAGGAAAGCGAGACATA
TGTCTGCTATCACATCAACTTACGAcaagttatttttctttataggCTAA
TCACAGTGACTTATTGCTACCAGACGAAGACAATAGGGAAATGGACCAAT
TGAAAAACAGGATCGATACACTTCTCGATGAACAAGAAAAGAAACGACCT
CAAGAAGGTATGCTGATCTTGGGTGTCAGTTTTTTTAGGGGAGGGGGCTG
TCTAGAGGGAAAATATCTCAGCTCGATTATACATGAAAGTGGGGCAGTTG
TCTGGTTTGGACGTGTCTCATTTTTTGGGCAACAATCAGCTTTCATTTCT
TTAGTATGTACACTGAAATGTGGTTGAAAtggcatacacgttttttttat
aagaacaaactatataataaaTTAAGGCTGCGCTGGATAAAATGTTAAga
tcaagttaagaacattttaaggctttgtggccttaaaaacaccctatttc
ttggaaaatggtcaaaaatattcacaaaataaggtctaaataagaacatg
tttagaacatttttaggctttaaactcaaaaagttaagaacataagaagg
cttcaaaaattttggatgttcttataaaaaaacgtgtagtggtatagtgg
tcatcaTCCTTGGCTCCCGCCTGGGAGGCCCGAGTACGATACTCACCGTG
TCACTACGATTCACTCGACAGGTGAACGTACCTTCACCCGTGTCAACCCA
TGCTATGTGTGGGGATTCGGGTACCATTACTCTGGTATGTGTGGGTAGGC
TTGGCTCGACTCGAGTCGAGGCTCGgctcccagtgtcgttcgagttTCAA
GATGTACAGCATGGCTTGGtagtgtctgtcagcgccgtgattcctactct
TTCTGGAGTAGAACCCATCCCAAATGCATTCGGAAGGCTCGTATCTATCT
ATCTGTGGTTCAAATTTTGTTAGTTTTCAATGATGATATTTTTTCTCCAT
CTACCGTTCGCATGTCGAAGTGTTGTTTTTTGCtatccttttttacactt
taCGATTAGCATAATGCTAATAGATTTTTCGCACCTTATATTTTCATATA
AACATACCTTGTAATTTCCTTATCAAATTTTCACCCAATGAATGGTCGTA
AGTTTTAAATCCCTCTCAGTGATAATAAATAAGCTTGTGCTAGATGTTTT
TGTAACTACAGTATTTCGTTAGTTGGGTTCACGAGGAGAAAAATATGGAT
GGAACTGATGATGGTAATCTTTTCTGCGTCTGCGCGTTGAGTACTTTTCg
ttgatttcatcatttttgtaTTTAACCTAGCAGGTATTTTGATCGAAAGA
AGAATTTtcatgaatgtttttttttgtttctctttTCAGATAGTCTCTCC
GGCTTGAAAGCAAGGCTTCGAGAAAAAGGTAGGAAATGATGATCATGATG
GAGACTTATTCATACTGACATTGTATTTGACAAGAAAATCAATTCAGACA
TACTTCTATACTATCAGAATAGGATatttaatttgatttgaatttctAAA
TAATACGTGGTTTAGAAAATTCGGCTGTTAGTACTAAACTATAAGACTGT
CTCTCTAAACATCCTAGTTATTCCGATATAACGGAATAACCAGTCACGGC
CAAAACTTTCAGGTTTTCAatgatcttttctttctttcctaAAGAGGTTT
ATGTTTTGTTGAGTTACGTAATTTAAAGCATTATTGAAGTAAACGTTTGA
ATGTGAAGAGGCGACCCTCCTTACGcgaatcgaacgtttgcttccataac
gACGGAAGTTatgtaacttaacaaaacacGTAAAATCTCTATACCAAAAA
GACGTTCAAAGATAAATATTTCCGATTTCCTACACCTCCAGCATCAGAAT
GCAGTCGTTTGAAGATTCAGTTAGAAGACATGCGACAACAACAAGAAGCT
AAAGATAACACTATGATCAAAATACAGGAACAAATACAACGCCTATTTGA
GGTTTGTCTGCTATTGATTGCTTATTCAAATATTCCACTGCACTGGTCAG
AAGCAGGGGGGTCAGTATAGAAAGAAATCTagcaattcaaaaatttttat
taccaAAAGAATAGTTTCAAGTTCGAAGAGACCCTCGTTTTCAGCTTCAG
AGTATCATGCCATTCAAGACATCATTTAACCATTTTCTTACGCAGCGTAT
ATAGAGGCGCACCTCCcttctatatcataaaaaagaaaatctttaagacg
aagtttaagtctatactatACATCGGTATTAAATAATAACAGTTTCAAAT
GAATCTCTTTCAAATCTCTTTCAAATGAATTCCTTCGTTTCCATAGGAGA
ACGAGCTATTACGTCAGCAATTGGCCAGCGCCACCGCAATGCATTCCAAC
GGCTCCACCCCGCACATCGCTACACCACGAAGtaagtgaagaagaagaag
atctaAGATTACTGTTTTGGTTTATCTTCGTTGACTTCTTGACACCAGAA
AAGAGCTTtataacaatgccttataagtGATAAAAAATCTATGAATAAGG
CTGGACTTGACAGCAAACCAAAATTTTTCCCCAGTCAGGTCCAGTCTAAC
TCGAATCCTTGTAGTAAAATAAAGATTAAACATTGttaatagtttgttct
tttattaGCTTTTTGAGCTCGTATTAATATACTGACTTTGCTTTTCTCTT
TCTCCTTCAGTAACGAATGGTATGGTACCGCAAACTCCTGAATCAGTCCG
CTCGGCTTCCGTTCAAAAATCCAAATCCAAAGAAATCCTACAGATGAAAA
GCGGATTGAAATCTGCAAGTGAACCAAATTTAAGTAAGTTTTTTTATCAC
TATAGACAGCTTTTAATGTTGATCTGAGGTTATGGATGCACTGTAGTAGC
CTGTTCACAGAAAAGACTTAATGTCGGTTTCTGGCACTCTTgtaactttc
ttttctttttatattttcagtaCGAGATGGAAACAGAAGTATTGGACTAG
TTTCGCCACCTTCGGTAGGTTAACCTAAAATTATATTCTTTACTTTCCTA
CCGCGCGATTTCTTTATAAGTTTGTTGGTCTATCACACGGTCTATTACGC
GTTTGCTTTTTTATCGCAATTATGTCAAATCCTTGATAAAGACTGCAATG
ACTTACTATAAACGACGTCAATATATGTAAAAAGTTTCAGACGGAATGGA
ATCGAGAATTAAAACCTGTGTTCTTGACCGTGTTACAGGCAAGGCTACGA
ACCACGATTGTTATTTCATTAGGTTTTACGACCCCACACAAAaccatttt
ttcattatttctctATTGTACAATCAGTGATCAAAGCAgatcaaagttct
tccgtctcagacggatttccgtctcacagaaatttttgtcaaagttttcc
aCCTTAGTTAGAAATGGTTTTATTTAGCAAGAAATAGTGATTTTTGATAG
ATATTTATTTTCGCTGTATGATAggcattctaagaacattctgagTTGTT
TTAATAAACAAATTTTAGTGCCTTTCTAGCCAATATagggggtaaaaaat
tttctgtctcatagaaaaaaaaatgcttTGACCACTGTACAATATATCAG
ATCAATACCTAGTTTGATTCATTTCCTGgccttttttttatcttcacgTT
ATTGCTTCTTTTTAGCTTTCAGTCAATGGAGATGAAGCCATATACAGACC
TTTTCGGCAGTAAGATTCATTCCTTTTTCAATTTACGACACTATTTCTTC
TTTATCTTTTGGATTCTCTTACCTTAACTAATATAATGAACCGTTTGTGT
TTTTATCCTATGAATCTATTATCATTGGCCTTGTTATATGAATAGAACAA
TACCTTTTGTATTCTTCTCTTTTCTTGTTTCTTGCTATCAAGCCTCTGCC
CCCTCCCTAGGAAAAGGAGTGCTAACTATGATGAACTATCTATCTTTCTT
TAGACTTATATCAGACCAACCGTTCACCACGTNAGGAAAAGGAGTGCTAA
CTATGATGAACTATCTATCTTTCTTTAGACTTATATCAGACCAACCATTC
ACCACGTGGTCACTTGATCAAGTGCAAGACTGGATGCGAGATGAAGGCCT
AGAAGAATACGCCAATAATTGCTCTAAATGTATCAAAAATGGTGAAGATC
TCATCAAATTCACTTCtgcagattttgaaaaaagtctcgGCATTTCAGAT
CCCATGATACGGAAGAAATTAAATCTAGCCCTCAAGGTACGGACTACTTA
AATTAAAACTAAATGTCAAAAACACTTGTCACTGCCCGTTCAGCCTCATT
TTATCGAGCTATTTTTGAtaagaatgtttttatatgaactTCAAGAGATT
TTCATCGAGAGGCTCAGTTCTCTAGGCGTGaattacttttgtttttttgc
tacAAAGTTTTTCAATATATGTTTTCCTTATTAAGGCAATAACATCGAAC
AGTCCAGATTATGCAGGCCGACTCGATCATAATTGGGTGGCACGTTGGCT
TGACGACCTTGGGTTACCGCAATACAAACAGAATTTTTATATACATAAAG
TAGACGGACGTGTTCTCGTTAATATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029597XLOC_029597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046365-exon-scaffold_109-1491911889:144357..144979TCONS_00046365-exon-scaffold_109-1491911889:144357..144979Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:144357..144979TCONS_00046365-exon-scaffold_109-1510915933:144357..144979Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:144357..144979TCONS_00046365-exon-scaffold_109-1575043694:144357..144979Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:155652..155763TCONS_00046365-exon-scaffold_109-1491911889:155652..155763Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:155652..155763TCONS_00046365-exon-scaffold_109-1510915933:155652..155763Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:155652..155763TCONS_00046365-exon-scaffold_109-1575043694:155652..155763Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:156946..156984TCONS_00046365-exon-scaffold_109-1491911889:156946..156984Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:156946..156984TCONS_00046365-exon-scaffold_109-1510915933:156946..156984Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:156946..156984TCONS_00046365-exon-scaffold_109-1575043694:156946..156984Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:157448..157557TCONS_00046365-exon-scaffold_109-1491911889:157448..157557Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:157448..157557TCONS_00046365-exon-scaffold_109-1510915933:157448..157557Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:157448..157557TCONS_00046365-exon-scaffold_109-1575043694:157448..157557Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:157903..157987TCONS_00046365-exon-scaffold_109-1491911889:157903..157987Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:157903..157987TCONS_00046365-exon-scaffold_109-1510915933:157903..157987Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:157903..157987TCONS_00046365-exon-scaffold_109-1575043694:157903..157987Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:158267..158389TCONS_00046365-exon-scaffold_109-1491911889:158267..158389Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:158267..158389TCONS_00046365-exon-scaffold_109-1510915933:158267..158389Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:158267..158389TCONS_00046365-exon-scaffold_109-1575043694:158267..158389Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:158527..158570TCONS_00046365-exon-scaffold_109-1491911889:158527..158570Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:158527..158570TCONS_00046365-exon-scaffold_109-1510915933:158527..158570Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:158527..158570TCONS_00046365-exon-scaffold_109-1575043694:158527..158570Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:159222..159265TCONS_00046365-exon-scaffold_109-1491911889:159222..159265Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:159222..159265TCONS_00046365-exon-scaffold_109-1510915933:159222..159265Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:159222..159265TCONS_00046365-exon-scaffold_109-1575043694:159222..159265Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:159510..159792TCONS_00046365-exon-scaffold_109-1491911889:159510..159792Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:159510..159792TCONS_00046365-exon-scaffold_109-1510915933:159510..159792Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:159510..159792TCONS_00046365-exon-scaffold_109-1575043694:159510..159792Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1491911889:159992..160134TCONS_00046365-exon-scaffold_109-1491911889:159992..160134Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1510915933:159992..160134TCONS_00046365-exon-scaffold_109-1510915933:159992..160134Clytia hemisphaericaexon
TCONS_00046365-exon-scaffold_109-1575043694:159992..160134TCONS_00046365-exon-scaffold_109-1575043694:159992..160134Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:144357..160134 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.78897	3.56204	0.693446	0.2715	6.07752	2.61406	5.2693	7.23927	5.20018	7.93486	7.95504	5.41248	8.43862	9.18287	6.94382	8.27725	8.68306	9.29418	4.55673	6.18459	5.90947	7.52802	6.61335	10.0565	5.71758	8.55028	3.55273	2.68834	6.21319	9.60281
Blast
[Close]
BLAST of TCONS_00046365 vs. Swiss-Prot (Human)
Match: LIPB1 (Liprin-beta-1 OS=Homo sapiens GN=PPFIBP1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.293e-26
Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 3 
Query: 1266 DQPFTTWSLDQVQDWMRDEGLEEYANNCSKCIKNGEDLIKFTSADFEKSLGISDPMIRKKLNLALKAITSNSPDYAGRLDHNWVARWLDDLGLPQYKQNFYIHKVDGRVLVNM 1604
            D PF  W+ +QV +W+ ++GL  Y N+    I +G+ L++ +  D EK LGI   + RKKL LAL+A+ S      G+LD NWV RWLDD+GLPQYK  F   +VDGR+L  M
Sbjct:  641 DMPFAKWTKEQVCNWLMEQGLGSYLNSGKHWIASGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYM 753
The following BLAST results are available for this feature:
BLAST of TCONS_00046365 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LIPB11.293e-2646.90Liprin-beta-1 OS=Homo sapiens GN=PPFIBP1 PE=1 SV=2[more]
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