TCONS_00046370 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046370
Unique NameTCONS_00046370
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1565

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046370 ID=TCONS_00046370|Name=TCONS_00046370|organism=Clytia hemisphaerica|type=transcript|length=1565bp
TCAGATTAATTATTATAAAATCACAAAACAGAATTCACTAAAGAACATCG
AATTTTCTAATGGAGTAAACCAGCTTCACTTTTAAAACTACTGATTATCG
AGGGATAACTATAACCTTCTATTTGGATTGCTTTTTGGCTGGATGATGCG
TGCACCAGGAGAAGTAATGGCTGAAAATCGTCCCTCCCCAACACTTGGTC
GAAGAACGTTAAGCAACGGATCCACTTCAAGTACAAACGATCTATCCCCT
GCTTCACAAAGGAAGGGTATCAATCGAGCCCAACTGACGCTACAAGAGCT
TCAAAGTCTTGCGGAGAGACAACGCGAACAGATCTTGTACAACAGTCAAG
AACTTAtggaaaaacaacaacaacttaTGAAAATGCACCACGATTATCGA
GCAAAACTCAAAGCACAACAAGAAAATAATCGCTCTGTCCCTAAAGGGTT
GAAAGCACACGAAAACCACACAACACATACTTCACTTCCACAATCACCCA
TGGCTCCCCATAGAACCAACCGTTCCCGCCCCTCCAAAGGCGGTGTGGAT
CAAGACCAGTACGCGAAAATGTTGAGGGCGACTTATCAGAATATGGGGCG
GATACAGAGCAAGAACCAAATGCAACATAATTTAGATGTCAAGAAGTTTA
ACAACACTGAACTTACTCACGAGTTAGAGAAAGTACGTGCGGCTTTCGCT
GCCAAACAAAACGAACTAGCAGACGCGGTTAAGAAAGTAGACGTATTAAC
ACACGAGCTAGAGCAACGTAAGAACGGAGAAAACCATCCGTCCGTACCGA
CTCCCGAACGAATCAATCGACGCAAGAAGATTCAAAACGCCAAAGATGAA
TTGTATAGACTCCAAAGTGAACTCATTATTCGAAACGAGATGAATTCTCA
GCAAAGCCATCAGCTTCAACTACAACGTGACATCATCCAGGAAAAGAAAC
AAGAACTCAAAATGCTCAACATCAGAATGGCCGAACTCGGTAACGCTTTA
CGCCGCCAACACGGAAGTGGGTTTGACCCACGTCGCTCCATGTCCTACGG
GAAACAATCGCCGGGACTTTTTAACGGAACTTATTTACAAGACACTCTAA
GTCGGCGCAAACTCAACAACAATAACAGTAAACCGCCGCCAGGACAACGT
GACGTCAACGCTAATATTGTTCCCAGTCCTTCGAAAGACCAACAACAAAC
GGAGCGTTCAGaagcgatgacgtcatcgccaTCTACGCAACATTTACGTA
ACGGAATGGTCAATGGCGGACATTCATCTAGCAGTAAATCGAAATCGAAC
TTTGAAGATGCTCCAGTGTCCGGGAACCAGGTTTGGCGAACTGACCCGAA
GAAGAGTTTGAACTTTGACAACCAACCACAACAGAAATCCTCTCCTCTCC
ATTCGCCTGCATCCTCTATCTCATCTCTTTCTTCACTCTCCTCTGCTTCC
GCTACTCCTGATGAATCAGCACCCTCGAATAAACCAGCTTTCCCCTTTAA
AGAGGCTCCACCGGCGCCGCCAACCCGCACCACACCCGTAGGGGTCTTAA
TCGATCACAACGAAC
Run BLAST on NCBI

transcript from alignment at scaffold_109:260881..286107+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046370 ID=TCONS_00046370|Name=TCONS_00046370|organism=Clytia hemisphaerica|type=transcript|length=25227bp|location=Sequence derived from alignment at scaffold_109:260881..286107+ (Clytia hemisphaerica)
TCAGATTAATTATTATAAAATCACAAAACAGAATTCACTAAAGAACATCG
AATTTTCTAATGGAGTAAACCAGCTTCACTTTTAAAACTACTGATTATCG
AGGGATAACTATAACCTTCTATTTGGATTGCTTTTTGGCTGGATGATGCG
TGCACCAGGAGAAGTAATGGCTGAAAATCGTCCCTCCCCAACACTTGGTC
GAAGAACGTTAAGCAACGGATCCACTTCAAGTACAAACGATCTATCCCCT
GCTTCACAAAGGAAGGTATGATCCTTTATAATGCTTTTTTCAGTTCTTTT
ATATGGCTTGAACTTCATATTTTGTCACTACATGGATTTGTCACCCTATC
CTAGAAGTGCAACATAACAGTTTTGTTTCATCATGTTAGacaagttttat
ttaattaaaaACATGTTCATCATTAAAAGGCACAATCTCTCGTTTTCTGT
GTGCCAATTTTCCCAATAATAAATAGCTAGGtagacaatagaccttttca
taaataacGTCACAaccatcacttgcctcgttttgaaattattaccatgg
tataaataaaaaaatcatttaatgtctcaagggacataatcaccatggta
attgtttgaatacgagacagtgatgtaatttatgaaaaggtcttttttgg
tctttttaTCAAAGTTCTAACTCATGATttattgataattcaaaatagTT
GTTTGTGCGAAAGTATcggaaatcaaatttttctatCTAAATCTCAGCCG
AAACAATTTACagtatcaaatttttcaaacaacatAACATAGAAATTTAA
AGATACTTAAAAGACTTAGTAGATAAACCTGCCCTCCTCTTTCCACCGTT
ACATTGCATAACATTCTTAAAATTGATACCAGCAATAATAAATAAACTTA
TTAAATCTCTCTAATGCCGCGctatttttatcttaaaaacgTATAGACAT
TAAGTTCAAAGGGGGAATCATACCAaccttttaattttatatttaaaTTA
TATTCCAAGAAAATCgtttcaaattttctaaagcTATTCTCGGTATGAAT
TTATTCAACTTTCGTATTACAGGACTTAACGAATGCTGCAAATGGTGCTA
TTGAGgtatataaatattttcaaacaacaCAAAATTCACGAATgacacaa
aaatgacaaaagttaGAACACAGTAACGTTAAACTAAACTTTTAGAAACT
GATGCATCAAAATATACTTGTATAACCATACAGAACTACGTTGACTTTAT
TTTAAacctaaagaaaaacaaattgacTTATTGACTCGTCGTTGATTCAA
TTGTACTCTTGTACATCTTTCCAACGGATTCTTTTGGAAGGACTTATGTG
TATTCTACCTATCACAGAACCTTACTTCTCAATTCCTTCGTGTATGACAG
CTCTGTAGGTTATTGTTGCATTTAATCGTGGAAGTAACAGTGAAGCAAAA
CTTGCGGTCATTCTTTGCTGCATAATGTGAACATCGGTTGActttttatc
ataattatcaCCAACGGGTGTGTGTAAAGCGTAATGAAATATCTATTCAA
GCTTCTTACCACTGATCTACAAAAGAAGTCAACTTTGTCCTGTTTTTACC
AAAGACACAATGATATCTCTCTCTCTCATCTTTGTTTGAGgttaactttt
tcattgttgCAAAAAGTAGAAATTAAATTTCACTTGCTTAAAGTGTGTAC
GTGCTTTATTCTTTTCTGTTCGTTGCTATTTGCTTTGAGAGATTCCGTGT
AGCAGACGGGTGTAGACGTCGAGCAGAATGCCTGAGAACTTCCACCATGT
ACAATCATCTTACAAAGCTCTGACTGGGCGAAAGAACCATCATCATCGCT
TAGACTCCATTTCCACTAAGAGGAATCATGTCGGTGTCAATGGACTTAAC
AAGAAGAAGAAAGTTTCTATAACTTACATGTATTTCAACCTTTACTACGA
GGTATGAACTGCTGTTTTATTTTTGTCCGAGGTGAAAGTTTCcccattta
tttttattttgtggagTCCTCATATCTCGAACTTCTTTTTTAACCCAACT
AAGTCTTCTGGTAGGTATATCAAGCCCATAACTCGACATTGCGATAATTC
GAACATACTTAGTGTtctccgtgcgtgttcgagttacggaATCTCCACTG
TAATTGCGCAATGTAAAAGTTTGGGTTAGatgtgattttgtgatttttgc
gggctttataattttgatttgGACTTCCTTGCTTCTTCTTTCCACTGAAG
GAAGTTCCACTTAAAAAAGATATCTTTGCATTTTAAAGGAAAACATTGAA
TTGCGTGAATGAGTTGTGATTGAATTTTATCACAAGGAATCAAATTCAAT
TGGCATGTGTGTAAGGACCAATTAAGGGACTCTTTGTGACAGGTCGAAAC
ATAATCTGATACCCTATTTTAGGTAGCTTATGCTTTGGACCCATCCTTAA
TTATTTACTGTTAACGAATAACCGAGTTAGCGAAGACATGATAATTGTTT
ATGTTCTTCTAATATGTTGATGGATCTTTGCTTTCATTTGGAAAAAGTGG
TGCATTGGTATAACTTGTTTCGTCTGCAGGTAGAAGAAGAGAattttcgg
ggaaaatgtcAGCGGAAAATTGTAGATAAATTTTGCCCAATGGTCAGGCT
TTGAGAGTTTAGCatacacgttctttttataagaaaattctatATAAGAA
CGtgaagcttcgatggccaaaatattaagaacaagttaaaaacattctaa
ggctttgcgacctctaaaacacccaatataaaggtgaaaataagatcatg
ttaagaacaatttttattCGTGTCTTTCCACGACAAAAGTACTCTCACGT
GCCTCCCTCTCTCATTGCTCACACATTTTACTCAAATTCCCATACCTTTT
TCGCACTAAAGATAGCACTTTTAAGGAGGTTTAACATCAATAATTTATGG
CTGAATACTTTATCTTATGGTCTCCAagctttaatttgatttttttacaa
gAGTAAAGGGCTATAACAAAAGCTCCCTATTTACTACGGGGAGAAACCGG
TCTCAACGTCTTAGAGAAGAGTCTACAAATTTGTTCTTACAACTAACGCC
TTCTTGTCTGATTAGGAAAGCTAAGGACAAAaattatctatatattaata
gccgtagtctgtatgtgtgtttgtgtgtcactttcgttttcgcaagcaat
gttttgttcttttaaaagatgacttttgcttcttgNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAAATAAGCTATAGGGTA
TAATATAAACTGCAATAAACTAAAATAAACTAACCCCTCTAACAAAAACC
AGGCTGTAAGAATCATCAGTTTGGATAAGAATTTTATCGTTTAAAAGACA
AATTGTATCACTTTGGATGCAACAGCTTGTAATTCTTTTCATCAGAAGGC
AATGACAAACataccgtaaatcaccgattaagcgcccgggcgcttattta
atttttcaggctctgaggggggcgcttattcaagcggggcacttattcaa
gcggggcgcttattttttatttcagaaattcgtatatcaacaaattcgga
atctgcttaaacttaacttcaaaaaaggatgaataaaagaaaaatccaat
aagaaacagaaaaaaaagaaagctaTAAAAGaccttgatttttatttttg
ttccaatttttttcaactgtttATAATCATCTGAAGAGAAATTCTTATCC
CGGAAATTAGCCTAGGCCACcaattcgaataagcgcccctccctggaggg
ggtgcttattcaaaggggggcgcttattcgagcggagcgcttataaaatt
attttaactaaatggggggcgcttattcgagcggggcgctaattcaagcg
gggcgcttaatcggtgatttacggtatACCTCGTTCTAACTTGAGATATC
AAAGACGAACTATCCTTCTCACTAATTAAAACAATACTGATTTTGAACAA
TAGCTTTCTTTACATTAGCTATTTCAATATTTGATACTGTAAGCCATAAC
AAGGAAATCTTTTCTCATCAAAATCCTGAAAGTTGAAGACAAAAAGTTAA
ACAAATGTACCATATTCAGGGCCTGagtacttgaagaaaaattgaaatga
taccCACCCCACCCCAaaattagtaccgggtactaacttttttgaatttc
taaattaGACACcgccacccggctatgggttagtaccctgcggctgtacc
cccccccctgagtatTAATGTAATAGTGTTTTTTGATTGAGTCTGTTTTT
ctcgtttcaaaaaaaaaagattttgtatagtatttcattgatttgaagaa
aaaaaatgtttcaaaagtttttataaTATGAGTTTGATATGCAGTTGGTT
GCGAAAAATCGGTCGGTTTGTTTACTGTTGTTTCGAAATTTTGTTATAGT
TTAGTACATAGTTgctcatttttcatcttctttttcattcttttattttt
gttgtttgctTTATATATGTTTTCATTGAAGCAAACAAAAAGTAAAACAG
GTCCTATTGTTCTTCATAGGGAAATAAAATTGATTACGTAGGGAATAGCT
TCTTTACTATCTATGATGGAAGAATTCCTTTCTCgtccttttaaaatttg
atgtaataggaaactaaagaaaaatgaaaattgaagatgataATTTGAAG
AACCATGATTCATCTaaccatggaaaaaaaatattttcagaggaAAGAAA
TTCATGGAATGTTTTTTCGTATTTTCTTGTACCGTTTTAAAGGCAGTCAT
GTTGAGCTTGCTTTTTAAAGTGattaaaagttttgtattttctGTAGAAA
TTGTTCACATTATGAAACAGTTATTTCTAGATAGGATAAACTTTATATGT
AGTTCATTTAGAGGTGACATGTGTAAAGTATTTTCAGGGTTTTGCTGAGT
TTCAAAGGTTGTAGCTACACACAATCATTACCTAGAGTTTAGTACCCAAA
TTGTTTCCATGAATTTATTTCAACTACTTTGACGGTACACATTCTGTCTT
GTGAAATTTAATTGATTGTATGCTTGTTTACTAGAACATGTGAGTACAGA
AAATGACGCAGCTTTTTCTTATCGCTCAGTGTAAATAGTTTTTATCGTTA
TCTAAATTTGAAATCATCGAAGACAATTTGGAGTTTGACAGTTGGAAGTC
GTTTCTTACAAAGATAGAATTGTTTGATAATTTTGAATTGGCTCTACAAA
TCGATATAGATTTTTATCAGAGATTTCACTTTCTATATACTCAACTTCTT
ATACAACTGGCTACTATTTCTATCAAACAAATTGATTCAGTTTTAATTGG
ATGACGTCTCATTCTCATAGTTTTGTATACTCTTGACGAAAAGTCAATTT
GTTGTAAATGGCCGTGACGCTGGTAGAAGGAGGCGAATACAGTTCAGATA
GTTTTTCGTTCAGCCTTGTGCAGTGTGGGATGTTTTAATTATAGTGCTGA
GCTACGGGCTTTCTTATACATTCAATTGATGGAAGTACAATTTGTactaa
agaagcaaaaagttAAGTTTCAGATCTTATCATGCTGTTTGTGTCTCTTT
AAGTCACAAAACGTGGCACAAAACTTACTCGTAAAGTTTTCTAAACTATT
GAGAAAGAAAAAGCAATGACGGAAGTTTTGAacttattttatttaaaaaa
ccaCACTATTGGACTAGTGGGTTTGGTAACTTtagtaaaattcaaaatat
aaaatatgtTGAAAGCGATTGCGCTTGATTGAGAACATGGTATAATCTAA
CTGTAAAGGGTTAAATCTCTGAGCTGTCTTATTATCACGTGCTCGTTAAA
TTTGACGACCATTTGTTCGGTCAGGTTGCCGACGAAAACAAAAGGGGagg
tgattttttttgtcagaTTCTTTTACCTCGAATGAATAAGCGAACAGACA
GATTGTGATTGATCCCTTCttagtttttgaatttgacagaAGAAAGGAAA
ATCGTGCTTGGAGTCAGAATCTGCTTGAAAATTCTGTTTGAATTAAACGA
ATTTCGAATGAACAATGTGTTTTTCTTAACCAGCTTTTGTGGAAGTTTCA
GGAACAGAATGTGGAAATGTAGATAGAAATTAGCTTTCTTGTTGTTAAAA
AACTAGACATTTGACAAACTTTGAACTGCTCCCAGATTTATGAATAAAGG
GTGAACTTAAAATGGATAAAGGGTCGACTTGTAAGCCCATATCTAAGATA
GAAATTAAAGTTTAGTTTAGGATGATAAAGCTCATCCATATATATATTTT
CTCGATGTTGTAACAGGATCTGAAAGTATTTTAACGCCAGCAAAACTTTT
GTCAACCTCAAATATGGTAATAAACTTTATGAGATTTCTTACTTTCTTAC
AAAGGAAAACATTTAGcaacttctttctttttttttgttttcaaagtttg
atgTGTTGACATTTTTACCATCATGTCTCCGATTTCAATGTGAAGTAAGA
AAAGGGGAAAATTTTAAAGCCGTGATAGTAATAACAGGATTATTGTGAGA
ATGCCTTAGTTGTAGAGCTTTGTTtcaggccggtctccacttgcgcgctc
CAGTCGCACTTTTTCgaacaaagcttccacgctattggtcataagaaaaa
tgaagcagctccattggcgcgatctgacgtaacgattgaaaaaagttgaa
atgaactcaactttttttttgagctCGCGCTAcacttttatgacgtaatc
ttttttccaagcaaaaaggattgaaaccAAACAGTgcaatcgcagcgcgc
gcaagtggagaccggccttcaTCTAAATGAGTTCCTATCTGAAATATTTG
AGGAAAAATTCAGACGTCTAGCCTACCAAAAGTTACAGTGACAGTCAGTG
ACAGTTAAGATTGAAGCCCGATTGAAGTTTTTTTATATGATATGATTAAT
ACCATATTATAGCGGCAGTTTAATTAGTTCAATGCAGCGGGAGTATATTT
ATTTAATTGCTTTCTTAAATCCTTTTCCTGTATtggttttttttaaatga
atatcTTACAATTAATCCCAAGATTGACAGTAGTACCTATCGACCATTTT
ACATCTTAACTATGCATCCTTTTAAACAATCTCTCCTAACattagagaaa
gaaaaaaatacttgaGAAAGGGAAAAGAATTTATTCTAATATCTAACCAT
ATAGAAAagcgaaagaaaaataattggcATATATTTATCACTGTTGGTCC
GACATTCTTATCATTTCATTGGATTTATACGTTTTTGATTTACTTCACGT
ATAACATCATTGCTTGCTCATCGAAGAAGAGAAGTGACGTTACTTTTTAT
GGTATCGGATTTAATGTAAATCTTTCCTCGTGTTTTCTTGGTTTTGTTGG
ATATTTTGACGGAAAGTTTATGAGAAAAACAACATGGTTTCACTGAAAGC
ACCTCCACCTGGCAAACCAGTATGTATTTGTTGGCTTTCGTTTGATACTC
CACTTATACATCTATCTatcaaccattgagtttaaacccgaagggctata
GTGGGATCTTCAACCTTTCAAGATTTGCGTTGAATTTAGAATGACTGATT
TATTCTAGcgattttattgttttcacgCGGCTGGAGATGGATTTTATCTG
AAAACTGCGTGGTTACGCTTTCAAGATTTAGCTTTATTTCTCATGCAAGG
GCACAATGTTATCAACTTTTTCGCCAAAAGATGTTATATATAACAGGGGG
TGTGGATTCGAGTTTACTAGGATCTGATATCATTGTATTGTTGCACTGAC
AGACACAGAAATTGACCTCGGTCGGCTTTGGTAAGCTGGGGAGGGTTCAG
GTTTTTAAACATGACTttagttgttgtttttttgttttaattatgTTGGA
TGTGGACTGGAGCCAAAATGGTGTAAAGAGTATTGTTCTTAACTACCTAC
ACCTCACTCAACATGAGAAACTTCATTCATAAAACATCAACAGGCATACC
ACTCAGCCTCTTTCATTAGAAAAGTCTGttgtttgtaaattaaaatttag
CTGTGTCGTCAATTCTTTCTGGAAATTGTgatattacacgctttttttat
aagaatggtgtaaatccatttcatcatggatattcttaacttttttggga
aaatcatcctaaaatattcttgcagcattcttaggttaggatcctaattc
agactagttttaacatacgtctcaagcataaaatggcattttttgagCGA
GTCTTACTTAGGGGTAATCaagggtaattgacaatttttatgattgaaaa
tgctctaaaaatggcattcttagcttgaatagcaaatttcatgatggtaa
tattcttagcattattcttaattttttggccatttttatcatggacattc
ttataaagtgtattcttataaaaaagcttgtaaatcatGTTAACATACCA
AGCATCTCAGGCAGCAATGACTTACAGTAATGTTTGTCATTAAACCCCTA
GTGCTTGTAATCTATCGATGACCTTTGAATTTTGTGGAACTTGTAATAAA
ACTATTTCAATTTCAAGTTCGTAAACCTTATTGGATTAATTCTCGAGCCT
GCATTCCCCAAAAGTCAGTGTGCAAGGAGAGACtttattatatatacttt
ttcAACGTTGCCTAATTAGTTCGAGGTATTACtattataaaatttataaa
cacACGATTGAGGAATGCTACCGAAATGGATACATGTTGCAATATCCATT
GAGGACCACTTAATGATGTGTTGCTATTTGTGGTGAGGGAAAACGTGCAT
CCTAATGTTTACTTAAGAGTCCCTTTAAATCCCTCAGTTATTTATAAGAA
AGTATGGTTTTATTAGAACTCTGTCAGACTCATTCAACTGTTTTTGTTGG
ATATAGGGTATTAATTGTCTGGTGGCTTCATAACATCAAACACTAGCTAA
ACCTAAAAACTATTTTAAGATATGTTAAAAGGTGAACCATCttaaaatga
ttcaatttttccccaaaaagaaTTCCTTTTTTTGTCAGCTTTCCAAGTTT
TTTTATGATGGACTGTGGTTTTCTGCCATACTCAAAGTTATCNAAAAGAA
TTCCTTTTTTTGTCAGCTTTCCAAGTTTTTTTATGATGGACTGTGGTTTT
CTGTCATACTCAAAGTTATCGAAACGGCCAGCCTGTTATTGAACAAAGAT
ATTGGCAATAATTTGAAGTATCTATTGTTTACCTTCTTAACGAGTTAATC
GATGCTGAATTAAAAAAGATTACCTTATCTTATTGTTGagtgaatgaaaa
aaaatgttatacAATTCATCCATAATCATTTTGTTATTCAGTCTTAACGT
AGTTGTAGAGAGTAATTTACTACGTTGGAAGCatgttatttttatgtttt
tagatttagaATTTTTTGGCCAAGATTCCAATGTTTTAATGGATATTCTC
AGCTGTTCTAGGGTTTTACAGTTTAATTTCTGAATTCTAGATTCTGAATA
TTACAGTCattgatttttttcgaaatcaatCGAGCCATGCTGAATCCATT
TATATAATGACGTGATGATAGCTTCATTTTCGTAGGAAGTTAAAAGGTtc
aaaatgtcaattttcatgttttataatGTGGTGTGGTTGTGACATCTACG
TAGGAACTTGTGAAATAAATGTTGAgttcttttccttttcctttctGTCA
ACCTCGTTGAATGGACGAGTTTCATCAGTGTACAATAGTGTCGATAATTA
GATAATGTACGTGGATAGCCTAGTAATGTAGGACTTTTGGACAGTCTCTC
GATTGTTTTGACGTGGTCCACGACCAGCTGGCTTAGCTAtttatgaactg
aacggaacattggaaggagcgagGACTCGAACAGCGAAGCCCTGGTTTGT
AGTGCTGATGTCTTTAACCACTTGACCATCACTTCTTAAGACGAGTCTAC
TTTACATCTGCTTTATTATCACAGTTAAATCTGTGAACGATCTACTTCTT
TAGAGAATTTGGAGGATTGAATTTGAGATTATATTTTTTTGGAAGAGCGA
AACACATTACACTAATCACCTTTTTGGCATACCAGCCAGGTGTATTTCGT
TTTCGAAACGAGTGTAATTAACTAAAACGTAATCACCTTCCAAGAATCTT
GATGCTTTCaattagtttttttcatttccaaaaaCGTTTAATAAAGACTT
TTTCAATCGGTAGTGGTAAGAGTGTTGGCGAAAGTTGGCATCGAAAGAAA
ACCAATCAATTAATTGATGACGATGCTATTAAACGCGTGCTTTCCTTTCG
AATGAATCTGTCTTTTCgtgtttttaaacatttttatttgatgtAACTGG
GAAAATTTATTGACATCAAACTCTTCTTgtactctttttgtactactatT
GGAGAATTCACTCTGTGTGACagttacagtggagtctctcgaacacgcac
ggggaacacaaatttgttcgagttaaggaaatttcgagtcatggagtaag
ttttaaaaagcattgCTAATTCAAGGGACCAGCAAACTTGTTCTACTTGA
AGAGACATTCGACtgagaggttcgaattaaagataCTCCACTGTAGTTAA
GGATTTCGACCTTCTTCTTTCTTCATTCTTTCTTCGCAAATAAATGTTTC
TTCTTCAGGCCTTGATGTTGTCTTCAATGTGAGGAAGCACTATGATGGTG
GCCGACGGTAAAAGAGAGacattttcaattcaattgcTGTTCTTTACCAT
GTGTGAAAATGGATATCCTAGCTTTGTTGAAAGGATGTTCACGTTGAGGC
TGCTCTTTTACCAAAACTCTTTGCGACGGAGAGTATACCATCTCTTATTA
GGAAATTTATTTCTGGTTACAAGCTTTCCACTGTAGGACTCTTTAAAATC
TCACCTCCATTGAGACACACCACGACGACATTTTGAATTGAGAATTTTTC
ATGAATAATGAATTATCCCACAACACGATTTTGTTTGAAAACTGACGGTA
AATATGACTCGCCTATTCAGCAGACAGGTTTGTCTCTCTATATTTAGATG
GCTTCATCATTTTAAACGAAATCACATTGATTATTTAAGAATACTCTCTT
CTGACcgttttactttcattttattcatcCCCGTGTAGAATGCGGGGTCG
TTTTATTATGGTTCGGGTTTTCCATGATTTCTATGTCTctgtttttgaat
attttttggtgGCTTGAATATTTTGTTTGTCTCTGTCTAGATTTGCCTTA
TGATGGTCATATTATCTCAGTTCGTTCAAAATAAACAGTTATACACCTAT
TACGAGCACTGAACTCTATGCAGATGGTTTCGATGTTCTTCTTTTCTCGa
gtgaaatttcatcattttttcaagactttCGTCTAATTTTACATATGTTA
TATTTTTATCCAGACTCAGAAAATCCCCATCAAATCTTTTCACATTAATT
CAAGTAACATGTCGATAAAAAGGGCAAAAGGGGTGATGTTCTTACGCTTG
GAATCAGTTGTTTGGCAACTTCACGTGAATACCTTTTGACAGATTGTTTT
GATAAAGGATTTAGGGGTCATTTTTGTAGCAGTCCTTACTATACACGAAA
TGTTTTCTTTGCAAAGAGTTTTTTGAAGCACTTCTCAAAGTCCAGTGTTA
GTTTAAAGctttaaagtttatttttacatcaaatatTTTGAGAAGACGTG
AATTATAAGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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AAATGTTTTCTTTGCAAAGAGTTTTTTGAAGCACTTCTCAAAGTCCAGTG
TTAGTTTAAAGctttaaagtttatttttacatcaaatatTTTGAGAAGAC
GTGAATTATAAGAACCAGAACCACTGGCTATTTTGGAAAGTAATTGCTAG
AATCAGTTGTCAAAATGCCTTTTGCTTGACTTTGTTAAATTGGGATCTTG
GAAATATAGTGCTAGACAGTGTACTAGAATCTGTCATCGCATCAATTCTG
GAGTCTTCTTTTCCATCGTCAACAACTTTTTTACAAcaaaatttttacag
tttttcaaatgtttgtaCAACCCTTCATCCTCTCTCTCTTTTTCCCTTTC
TCTCTCTACACGTTGCAATAAATTTATGTTTGTTATCTTTTCTCTGCTCA
GATTGTGTGCGGTAAAGATATTTCGTAATATTGTCATTTTAAATCGTAAC
CGCATCGGGTTGTTGTGCTAGTTGGTTAGAGGGTTGATTTCGGAAAGACG
TATACACAATTCTTCTTTATGAAAATGCAAAGTTAAAGCGAAACTTGTCA
TTCCAACTTTCGCATCCTATGTACTGTACATATTCTCAAATTGATGGAAT
AGGAATCTTATTAGTCATTTTGTTTAGAGTCTTCATGTTACATTACACCA
AACTTGATCACGTGTTTTACAGTAATATGATCCATATATCATTCTTTATG
AGGCAACTTTGCTGTAGTTAAAAAGCGATCATTTTACGCAAACGAGTGCT
ACTTTATTGCAAAAGTCATGATGATATTACTCATANTTCTCAAAGTCCAG
TGTTAGTTTAAAGctttaaagtttatttttacatcaaatatTTTGAGAAG
ACGTGAATTATAAGAACCAGAACCACTGGCTATTTTGGAAAGTAATTGCT
AGAATCAGTTGTCAAAATGCCTTTTGCTTGACTTTGTTAAATTGGGATCT
TGGAAATATAGTGCTAGACAGTGTACTAGAATCTGTCATCGCATCAATTC
TGGAGTCTTCTTTTCCATCGTCAACAACTTTTTTACAAcaaaatttttac
agtttttcaaatgtttgtaCAACCCTTCATCCTCTCTCTCTTTTTCCCTT
TCTCTCTCTACACGTTGCAATAAATTTATGTTTGTTATCTTTTCTCTGCT
CAGTTTGTGTGCGGTAAAGATATTTCGTAATATTGTCATTTTAAATCGTA
ACCGCATCGGGTTGTTGCGCTAGTTGGTTAGAGGGTTGATTTCGGAAAGA
CGTATACACAATTCTTCTTTATGAAAATGCAAAGTTAAAGCGAAACTTTC
AAACTTGTCATTCCAACTTTCGCATCCTATGTACTGTACATATTCTCAAA
TTGATGGAATAGGAATCTTATTAGTCATTTTGTTTAGAGTCTTCATGTTA
CATTACACCAAACTTGATCACGTGTTTTACAGTAATATGATCCATATATC
ATTGTTTATGAGGCAACTTTGTCGTAGTTAAAAAGCGATCATTTTACGCA
AACGAGTGCTACTTATTGCAAAAGTCATGATGATATTACTCATGAGAATG
CTTTTAACGAGTTATCAAAATGATAGTTGTGTATTTTCTGTAATATACAA
GAAGAGTGTTTTATGCGATATGTCTTTTTCAACAATGTCAGTAAATTGTG
GTGATAGGGTGTTCCATacaataccgtaagttggtctaatttcgacaccc
ttcctTAGAGATagaaataataggaaggttggtatcactgatagacaaaa
gattttttccgcTCTGAACGTTAAACAAAGAtaattagtttcaatcagcg
attcggACTTTCCTAATATTCCTATTTtcaaagaaggatgtcgaaattag
aagagggatgtcgacatcagaccaacttacggtactagATACTTCGGTAT
CTatctaaaatttctttcaaaatgtttgtttattaatctctaaagAACTT
CAATAACATCAATAATCTGTGAACTAAAGAACTTAACAGAAACCTTGTTT
TATGTTTAACCGTGATGGTTTGTTAAACTTTTGCCCGTCTGAATTTGTGT
GTATGATCATTGGATCAGTATcctttgcttactcgtcaattttaatttac
aagctttttcactttGGTTttacacggatgtggagcaagattagtcagaa
agaggaaaagacaaacatttttttgcttatatctgcacaatataacaata
ggaagacactgtcttgatatgaaacgggaacatttatgtaaaaataaaac
ctttaaatctcTACTATATCTGTTATCGCCAGTAAAACAACCAGCAAAAA
AATAGTAATAAGAAAAAATGATTGGGTTCGTCCAGATGAATGGTTTGGAC
AAACGGAAGAAATTTCCACATCAGcatcaaaaagtgaagaaaattcCCTC
TCCTGATGCCTCTAGTGGTaatggtgacgtcaccatcaATAAATACCTCG
ATGGAGTACGTGAATTCGATTGAATCTACTGCAGCTGTTTTTGACAGAAT
TTGAATTGCTAAGAAAAACTTTTAATGCTATTCACATCCATTTCTATGAC
GACTTATAAATGACGAACTATAAATTGAGACTGCAACCTAAAGAAATTTA
GTTGATCCTAGCTTAATGATAAAAATGCTATGTACTTTATACTTAAAGAC
TACAACTTCAAACCCTAACAACGTATTATAAACTGTTCTACCAAACGCGA
TGACTTATTTTTGATTTCGTAAGACGGAAAGAGAAATTGACCTTTTATAT
AAAAAGGGTGAAAATTCTCTTCACACTGAAAACCGCATTGACCGACCACT
GTCGAGACAGTCACACAATAaacttgttttgatattttttcttttttcct
ttgaaTTGAATCTCTCTCGCACAAAATAGTctgtttgtttcaaaatttta
agaagaaatcTACCGTCTAATAaccttgtaaaaaaattcaccttttaaAC
CTTCCTTTCTCTTCTTGCTAATTTCCAGGGTATCAATCGAGCCCAACTGA
CGCTACAAGAGCTTCAAAGTCTTGCGGAGAGACAACGCGAACAGATCTTG
TACAACAGTCAAGAACTTAtggaaaaacaacaacaacttaTGAAAATGCA
CCACGATTATCGAGCAAAACTCAAAGCACAACAAGAAAATAATCGCTCTG
TCCCTAAAGGGTTGAAAGTAAGTAGTGACTGAATATTCCCATAAACATTT
ATTGACCATAGAACTTCAAAATCTCGGTAATACCATTATTGCAGGGGCTA
TACCCTCCACTGGAAATCTTATCAAAATGTTTAGTTCGACTGAGATATTT
TTTGCTGGTTTTCTAGTTATGTAACGTCATAAACAAAAAGCAAACTAAGG
CTATTTCTCTTTTATCTTTTAGGCACACGAAAACCACACAACACATACTT
CACTTCCACAATCACCCATGGCTCCCCATAGAACCAACCGTTCCCGCCCC
TCCAAAGGCGGTGTGGATCAAGACCAGTACGCGAAAATGTTGAGGGCGAC
TTATCAGAATATGGGGCGGATACAGAGCAAGAACCAAATGCAACATAATT
TAGATGTCAAGAAGTTTAACAACACTGAACTTAGTAcgaacttctttttt
ttcataatcCCGAGATTGTATTATGGCCTTTCTTTTTCGGTAATTTCACA
Acaacgtgttttttttttcacactttcacaatgctggacaaaaggttgta
gacacatgaaatttcagtgaaaaatgatgagaaatagNacaatgccggac
aaaaggttgtagacacatgaaatttcagtgaaaaatgatgagaaatagag
caaaatgactcttcaatgtgtctgaaaggggatggaaattaagaaaaaca
cttttgaagccgTTGCATCGcctttgaattgcttttgagcgaaccacaag
caaaaaatcagcgttttgatattggtgtaagccagttaatcaagcccttg
tggtttgcccttgcggttagactgtgGGTgatgaaagactttgaaagact
ttggatGGGTTTGGATGGGCttggatgggtttggaaagcacccagaactt
gtttttgatcgatattgaagtattttgcaaaccttttgtccagcattgca
TGTTATCTTGTACTCGTTTTCCTGGAACATCACTCTCGACAGTCTAGACC
ATGCAGAACATGCtcttaattttttcttccttatgTTACAGCTCACGAGT
TAGAGAAAGTACGTGCGGCTTTCGCTGCCAAACAAAACGAACTAGCAGAC
GCGGTTAAGAAAGTAGACGTATTAACACACGAGCTAGAGCAACGTAAGAA
CGGAGAAAACCATCCGTCCGTACCGACTCCCGAACGAATCAATCGACGCA
AGAAGATTCAAAACGCCAAAGATGAATTGTATAGACTCCAAAGTGAACTC
ATTGTATGTCAAATGCTTTTCAATAATCCTTTCTCTTTTATACCTGTTAC
AGTTCTCTACTACCTCCTGTAGTGATATTTCACGCATTAGATCGGGCata
taccgggtgtcccagaaaaaagttccgctctttgaagtgaaNTGATCAAG
TTGacttaatttaataaatgacccctcaaaatttaagtttatccttcctc
tttccaatgcaaaaagattcattatctaaaagttcatagaacttgagaaa
attcacttcaaagagcggaacttttttctgggacacccggtatataTTAA
TTTCTACGTAGGATACTGCACTCTTCTTCTCTTAGCTTTGTCTGGCCGTA
GTTTCTAACCCCTGTATTACGTACAATGTTTGTGTTGCATGTACAATGTT
TGTGTTGCATGACCCAATTAGCGAGAAAATAATCCCGCAAATTATCCTAG
TTCTAAAATCTAGATTCTTTACACCCTCATCCATTCCAGATTCGAAACGA
GATGAATTCTCAGCAAAGCCATCAGCTTCAACTACAACGTGACATCATCC
AGGAAAAGAAACAAGAACTCAAAATGCTCAACATCAGAATGGCCGAACTC
GGTAACGCTTTACGCCGCCAACACGGAAGTGGGTTTGACCCACGTCGCTC
CATGTCCTACGGGAAACAATCGCCGGGACTTTTTAACGGAACTTATTTAC
AAGACACTCTAAGTCGGCGCAAACTCAACAACAATAACAGTAAACCGCCG
CCAGGACAACGTGACGTCAACGCTAATATTGTTCCCAGTCCTTCGAAAGA
CCAACAACAAACGGAGCGTTCAGaagcgatgacgtcatcgccaTCTACGC
AACATTTACGTAACGGAATGGTCAATGGCGGACATTCATCTAGCAGTAAA
TCGAAATCGAACTTTGAAGATGCTCCAGTGTCCGGGAACCAGGTTTGGCG
AACTGACCCGAAGAAGAGTTTGAACTTTGACAACCAACCACAACAGAAAT
CCTCTCCTCTCCATTCGCCTGCATCCTCTATCTCATCTCTTTCTTCACTC
TCCTCTGCTTCCGCTACTCCTGATGAATCAGCACCCTCGAATAAACCAGC
TTTCCCCTTTAAAGAGGCTCCACCGGCGCCGCCAACCCGCACCACACCCG
TAGGGGTCTTAATCGATCACAACGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029599XLOC_029599Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046370-exon-scaffold_109-1491911889:260881..261145TCONS_00046370-exon-scaffold_109-1491911889:260881..261145Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1510915933:260881..261145TCONS_00046370-exon-scaffold_109-1510915933:260881..261145Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1575043694:260881..261145TCONS_00046370-exon-scaffold_109-1575043694:260881..261145Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1491911889:283509..283697TCONS_00046370-exon-scaffold_109-1491911889:283509..283697Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1510915933:283509..283697TCONS_00046370-exon-scaffold_109-1510915933:283509..283697Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1575043694:283509..283697TCONS_00046370-exon-scaffold_109-1575043694:283509..283697Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1491911889:283903..284113TCONS_00046370-exon-scaffold_109-1491911889:283903..284113Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1510915933:283903..284113TCONS_00046370-exon-scaffold_109-1510915933:283903..284113Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1575043694:283903..284113TCONS_00046370-exon-scaffold_109-1575043694:283903..284113Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1491911889:284722..284933TCONS_00046370-exon-scaffold_109-1491911889:284722..284933Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1510915933:284722..284933TCONS_00046370-exon-scaffold_109-1510915933:284722..284933Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1575043694:284722..284933TCONS_00046370-exon-scaffold_109-1575043694:284722..284933Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1491911889:285420..286107TCONS_00046370-exon-scaffold_109-1491911889:285420..286107Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1510915933:285420..286107TCONS_00046370-exon-scaffold_109-1510915933:285420..286107Clytia hemisphaericaexon
TCONS_00046370-exon-scaffold_109-1575043694:285420..286107TCONS_00046370-exon-scaffold_109-1575043694:285420..286107Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_109supercontigscaffold_109:260881..286107 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.81521	1.69893	1.36765	1.15751	0.57156	0.000671467	7.19101e-06	3.73916e-09	0.000696664	0	1.49968e-07	0.00838367	0	0.0574061	4.4983	1.10496	0.43259	0	0.351373	1.51321e-08	3.81903	1.71232	4.49621	12.3023	0	6.70246e-09	5.35289	1.66586e-07	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046370 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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