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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046512 ID=TCONS_00046512|Name=TCONS_00046512|organism=Clytia hemisphaerica|type=transcript|length=392bp
GGCGATGTAAATCGATGATCGAATTAGGAGATGGTATCCAATCGAGAATT
TCGTTTTACGAACGAGGAGGGGATTGGGACGAGAAACCGCGCAAATCTCG
TAAACCAGTTCAACGGTCTGTTTCGATGAAAGAGAGAATAATTGAACGAG
CTGATTCAGTTTACAGAAAGCTTCATTCGTCCACCAGCTCATCCAAAGAA
GGCGAAGTATGGGGTCGGCAAGATTCATCAACGTTTATGCGATTCCGAAA
ACGAAAAGACACCAAGCAATCAAAGAGGTATCATGAGTTTAATTTGTGgg
atttttcagtttcttgaaCTGTTGCGGATCGGGTAGCCATCTCTTGTAGA
CGCCCTTACCATGTGTAAAAGTTAACCACGACGGAATCAAGA Run BLAST on NCBI transcript from alignment at scaffold_113:371334..372401+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046512 ID=TCONS_00046512|Name=TCONS_00046512|organism=Clytia hemisphaerica|type=transcript|length=1068bp|location=Sequence derived from alignment at scaffold_113:371334..372401+ (Clytia hemisphaerica)
GGCGATGTAAATCGATGATCGAATTAGGAGATGGTATCCAATCGAGAATT
TCGTTTTACGAACGAGGAGGGGATTGGGACGAGAAACCGCGCAAATCTCG
TAAACCAGTTCAACGGTCTGTTTCGATGAAAGAGAGAATAATTGAACGAG
CTGGTAATTTAGATTCAGAAATTTATTGGGAAATTGGGAATCAATCTCAT
TGGATGTTACCTTTCTACAACTGTTTAAGAGTTTGAATCGTATAGAAACT
ATGATAGAAACTAAGCTAGATTTGCATATTACTAGTGTTTTAGAAAATGC
AGTTAGAAATTTGAAAACCTTTGATAAAGGAAAACCTGATTTTAATATCC
ACCAGACTTTCTCTGGACAAATCGCTCCTTCAGCTATCTAATCATATTCT
GTTTTCCTTTTTATTCAGATTCAGTTTACAGAAAGCTTCATTCGTCCACC
AGGTATTATAGTCGCTTCCTTTTATGAAATTTTAATCCCCATGTTTCCCC
GCCTCAATCATCCCCGTCTCAATCATCCCCGTCTCTATCATCCCCGCCTC
GATCATCCCCGCCTCGATCATCCCCGCCTCGATCATCCCCGCCTCGATCA
TCCCCCCTCAATGCATCCCCTCCACAATTCATCTGGTACATCCCCGTCAA
CTACTAACATTTTTTCGATTTACGAAATGCTCCTTACATTAGCATCCCAA
AATACTGCAAAAAAACTGTTGCTCTCTCAATGTGTAGGACATCGCGTTGA
TGATGGCTTTTTCACTAAAAGTATTCTTCTTGTTTCACTAACCTTCAAAA
AAGCTGCTTATGATCATGTTGTGCAAACTCTAAACACAAAATTTGATCGA
TTTATCCTTTCAGCTCATCCAAAGAAGGCGAAGTATGGGGTCGGCAAGAT
TCATCAACGTTTATGCGATTCCGAAAACGAAAAGACACCAAGCAATCAAA
GAGGTATCATGAGTTTAATTTGTGggatttttcagtttcttgaaCTGTTG
CGGATCGGGTAGCCATCTCTTGTAGACGCCCTTACCATGTGTAAAAGTTA
ACCACGACGGAATCAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046512-exon-scaffold_113-1491911889:371334..371486 | TCONS_00046512-exon-scaffold_113-1491911889:371334..371486 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1510915933:371334..371486 | TCONS_00046512-exon-scaffold_113-1510915933:371334..371486 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1575043694:371334..371486 | TCONS_00046512-exon-scaffold_113-1575043694:371334..371486 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1491911889:371752..371785 | TCONS_00046512-exon-scaffold_113-1491911889:371752..371785 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1510915933:371752..371785 | TCONS_00046512-exon-scaffold_113-1510915933:371752..371785 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1575043694:371752..371785 | TCONS_00046512-exon-scaffold_113-1575043694:371752..371785 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1491911889:372197..372401 | TCONS_00046512-exon-scaffold_113-1491911889:372197..372401 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1510915933:372197..372401 | TCONS_00046512-exon-scaffold_113-1510915933:372197..372401 | Clytia hemisphaerica | exon |
| TCONS_00046512-exon-scaffold_113-1575043694:372197..372401 | TCONS_00046512-exon-scaffold_113-1575043694:372197..372401 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_113 | supercontig | scaffold_113:371334..372401 + |
Blast
The following BLAST results are available for this feature:
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