TCONS_00046518 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046518
Unique NameTCONS_00046518
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2036

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046518 ID=TCONS_00046518|Name=TCONS_00046518|organism=Clytia hemisphaerica|type=transcript|length=2036bp
gggaaataatttttttggctgCGCTGTTTATTTTGTCTAAATAATTATTT
AGAATGGATACTCTTGGGCAGGAAGAAACGAGTCAGCCATCAGCAGTTTC
AAGATTCTTTTTATCCATCTCACAGcggTTTCAAGTTATTTTGGACAAAA
CAGTTCCCCATGGACTTTACAGATGGGTGTTCTCCTTATTCTTAGCAATA
ACGTATATTATTCGAGTGTATTTACTACAGggaTGGTACATCGTAACATA
TGCTTTAGGAATATATATTTTAAATCTATTTATTGGTTTCTTAACTCCGC
GAATCGACCCGTCAAATCAAAACAGAGATTTCTTCTCTGAAATATCAGAT
GACGAAGAAGGCCCTGGGTTACCCACAAAAAGGGACGAAGAATTCAAGCC
ATTTATCAGAAAGTTACCTGAGTTCAAATTCTGgtattcatGCAGTAAAT
CGATAGTAATTGCTACAATATGCACGTTCTTTGAGATGTTCAATGTTCCT
GTCTTTTGGCCCATTTTGGTTATGTATTTCTGCATCTTATTCGTCCTGAC
TATGAAAAGACAAATTAAGcaTATGATCAAATATAGATACCTTCCTTTCA
CACACGGTAAACGCAAATACCAGGGAAAACCTGACGGAGACGTTATGATG
CAATAAATCGTACACCCAAAAAATATCGTGGTtagaaaaattgttgaaat
tttaatttaaagaactttatacaaaataattattttaaacACAAAAAGAG
TTTTTATCGAATGGATATTTTATTGGATGACAATGTTAATactttggttg
gttgatatctTGATGGTTGTACAACAGTTTGAGAAAACCCTTTTGAtgct
ttgtccagagattttaTGAGTCNTCTTGATGGTTGTACAACAGTTTGAGA
AAACCCTTTTGATGCTTTGTCCAGGGATTTTATGAGTCACGTATACACCT
TCTTCTGTAAAGTTCTCGGTGTTTTGATGACAGATAAACATTTCGAACTG
ACTCATTCAGATTTAGCATGCATAAGTTGTTTGGTTTGTTTATTACAATC
AAGTCTGCTAAATTTGCAGTTCATCTAGTGCTTTGAGTTTAGACTTTATG
ACAGAAATGACTCGCTTAGTTTTGATGAGAATGAAGTATCACTTAAACAG
ATTATCATACTATTTCCCtgcttttcatttctttttgtgCTTTCAACAAA
AGGCAAAATTAGGCAATATATTAAATACATAGGAATGCGGGAGTGACACT
TGTACTAAATTACTAAAACAGTTTTATTATTAAGTACTTGCAGTATgtga
tatatttatttttttgataccaaAAAGGGTTTTTAAGTTGTTTTGATCTA
ATTAGCAAGGAGTCTCCCtagaatttcttattttttgctgtCTCCTTCTC
ATAGATTTgggtcttcttcttcttcttcttcttcttcttctataTTATCT
ACGTCTGTTTCACAAAATTAGTACTCACCAGTAAAACTTTCCGTCAGGTG
CTTGTGTACgcgcttttttatatataagaaccAGGAAAATTTAGCTAAGG
CTGGGCTattctttatattttgaaattttcaggattaaATGTTCTTACGG
TGTCTTTAATACACATAGTTTCATTactcaaaaacttaaaatagaATCTG
TTAAAATCTGAGATCTGAGAGGCTCatgattgttcttaatttgttcttag
gttttggtctattttcagcctcgtgttcatataaaattgttcttataaaa
aagcgtgttgtGTGAAATCTTGAGGATAGCCttatttgtatttttatcaa
GGCGGTTACTTTTTTAGACGTTATATTTTATGTTACATTAACTTTGTTTA
TAAATACGAATAATGTagattttttgcccttttttgttgttttgaaattt
tgaagaaaaagttaCAGCCCTTAGGTTTCTTGCGGtctatccaaaaaaaa
tccttgTATGTCTGTCATTTCTTTTTAGTCTAACCATGGACATATAAACG
ATTGTTCCGTCAcaattttgtttctttgaattactt
Run BLAST on NCBI

protein sequence of TCONS_00046518-protein

>TCONS_00046518-protein ID=TCONS_00046518-protein|Name=TCONS_00046518-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MDTLGQEETSQPSAVSRFFLSISQRFQVILDKTVPHGLYRWVFSLFLAIT
YIIRVYLLQGWYIVTYALGIYILNLFIGFLTPRIDPSNQNRDFFSEISDD
EEGPGLPTKRDEEFKPFIRKLPEFKFWYSCSKSIVIATICTFFEMFNVPV
FWPILVMYFCILFVLTMKRQIKHMIKYRYLPFTHGKRKYQGKPDGDVMMQ
Run BLAST on NCBI

transcript from alignment at scaffold_113:10548..27615-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046518 ID=TCONS_00046518|Name=TCONS_00046518|organism=Clytia hemisphaerica|type=transcript|length=17068bp|location=Sequence derived from alignment at scaffold_113:10548..27615- (Clytia hemisphaerica)
GGGAAATAATTTTTTTGGCTGCGCTGTTTATTTTGTACGTATGTTTGTTT
TGTTTGGGTGTGTTCATGTAAGATATTTTCGTGACAGTTTTAATTTAGAA
TTCGAAACATTTAATTTTCACTTTCATTTATTTTTTTCACCATACCTCCA
TCCATAGACCTTTTTTTAAAGAGGCCACCCTGTTGAATAATTATGTAGTC
CAGCAGAAAAACAACGATAAAACCATGCATAATTATTACAATATGCATGA
TACAGTAANCTTTTATCAACTAAGATCTGCTAAGTGCTAAAGTCACATAC
CTAAAGTATTCACTTCGCTATTTTTTAGAATAATTTTAACCAAAACAAAC
GACCCGATGTTTATGTCTCGTGTTCCATTTGTTTAGACGGTCCGCACGGC
CCTTGAATTTCGCAGACGGTCGGTCTTTTTTATTTGAAATGCCGCTATTC
TTTTGATTATGATTACAGAGATAATTAATTCGCGCAACTTTCGGAAAAAA
GTTTAGAAATTATCTCCGTTATTTTTAAAATGTAAACTGAGCGAAGCCGT
AGCGATATNACACACCAGTAGACTCTCCCACTTTTGATCAATGCGCACGC
AGCATGCATGCGCGCAAACATGCTTCTGGATGGAAGAATGCGACAGTCTA
TTGAATACAAATTATTCCAGCTAGTACCAATGTGATAAACAAGCCGTATT
GTATAAGGGTTGCGAAGCGATCCAGACTTAACCTCCTAACAGTTACATCA
AAATGCCTCGAAAATGTCAATATGAAAATTGCGTAATCAGAGAACGTATG
TCTCGCTCATTATAAAAAGGCCGAGACAAACTTTCAATAANNNNNNNNNN
NNNNNNNNNNNGAGAATTTGATGGCCGTTAACGTAGAGGGGGGGAGGGGG
TCAGAACCATAACGGCCAAATGCCGTTAAAAAATTCGAAAGTCGAATGTC
GACGGCCCCTTATGGTTCGTTTCAACTTGACCATTTGTTTAAAACTCAGC
CTCCTAAATATTTGTGGTAGATAAATTATGTACAAAGAAATTCATACTTT
TCCAACCCGGCCAATCTTTAAAAAAGAAGCGAACAATAAAATGTAATTAC
CCTTTCCAAATAAACCTCTTCGGTGGCGANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTCTCACA
CTTATGTCTTTTTTTTTCGCGTCCTTTTCCGTGATTACTTTTATTTATAT
TTTTAAAGACAGGTAAGAAGGCATATTGATGTAACTGCCTAACGAGACAG
AAAATGTTAACAAAGGGAAATAATTATTTTGATTGCTGTTTATTGTACGT
TTGTTTGTTTTGTTTGAGTGTGTGCGCAATGCTCTTTTTTTCCTTTCCAA
TTCTTCTAGTTCTTCTAGAATAAAATCGAACGATAGTTGTTGAACGATCA
AATATTTTTATTCAAATTTGTCTGTCTGTCTGTTAAAGATAAAATTAAAA
ACAAAAAACAAAAATAATCGAGATCAGGTAACTTGCATCGGTGAAAAGAA
ACTTGCATAGAGTCCCCTGCCCAGTTGGGGACCGGTCTAGTTGGCGATCG
AATGTCTTTGAACCCAGAAAAATCATACAATAACAAACCTGTGCTGTGGA
GAATTTCTTTTGGTAGTTATCTTCACAAGTTTTTCAACCGGTATTCCAAC
GAGAGAAAAAACCGGGGGTCAAATTAAATGTTTCTCCCTTCTTGCGGCAA
ACATAAAAGACTTTAAGAGGCCATTTATCGAAGAAAGGGGTGTTATATCA
TAAATGAATTATGTAAGTAAGTGATATTTTAAGTAAGAAGTTCATTAACA
ATTTTATTTTGAAGTTTGTTTTTAAAAACAAAACNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTAATACAGATCATTTGGCAGTGTAGTTGCAGC
CTATACAAGAATTGGAATCTAAAGTCTGAAGTCGTAACTCCTTGCCAGTT
ACCCCGCAGAGAAATTTTTAGTTGGCAGACACTGACTTTAGGTTGGTCAC
GTGCGTTTGGTTTGGGAACGCGAAACACGAACGCAAACTACCCATGTCTA
AACTTTTCAATATATCTCCAGAACTAACAGATTTTTTTAAATTCTGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCGAAAAACAAATAACT
TTTACAGACTTACCTTCCCCAAACATTAAAGAAGCCTCTACTAATTAAAG
TAAATGAGATAAGATCAGATAAAACCTTAAAATCAACCAGAATTTACAAC
CTTTCGTCCAAAGCAAAAGACATGCTTTTCTCGCCGCCATCTTGAATTTA
AAATGAGAATTCTAGAGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGACTTATCTATTAAAAAACCCGCGCGAAAT
ACAGGGGGTCACAAATAGAAATACAGGGGGTCACACTACTGGCTACAGGA
ACTGAAAGCAAGCAATTAAGGCCAATATTTTTGGTTTTTCTGAAGGACAA
AAGGTATAGGAAGCTTTACTTAAAGAGGGATAAGGCTGGGACAATCTATT
TAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGGATTTCTAGA
AAGCTTACCCATTCATTGTTAATACATTTTTTATTTGAAAGTAATCTCTT
CATGGAATAAAAAGATATAGTCAAATCTTGTAGGGTCATTTTTCAAATTT
TTTTTGCCAAATTCGATTTTCGCATTTCGCCATTTTACCCTACGCAAACG
CACGTGTGGTTTGGAAATCATTGTATTTTGTAATGTAATCTTCCCTTTAG
ATGAATACTTTTATTTATTTGGATTCGTGAAAGGTTCAAGGTTTGTTTAC
TTTTTATTTCAAATTATTTCATTGATTTATTGAGCTGCAATAGCTGATTG
AAAAACAAAGATTTTTGATAGTTATCAGCGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
GGCTTGGCCGCCATTTTGAATTTCGATTTTTTTTCTCCTGTACTCGGCAA
TTTAGAGGTTGTTCGTAATACGCGATTTGGCTTACGCGTAACACTTGTGT
CTTAGAGATATATCACCTTCATTGTATATATTCTTTATATCGTTTCAGTC
AAACATTCACTATAATGTTATATACTAAGTAGAAAAACCTCCTGGTTATT
ATTTATGTTTGACTTATTCACTAATTCTTAATGGAGTGAATTTTTTTATC
TGTCTTTATCCTTGACCTATTTCCCGTACTGTGTAAAAAAATTCTAGAAA
AGAACGAGTAGAATCCAAAAGATCCAACTTTGCACAGAAGCACGCGAAAA
AACCGGATTTTTCAAAAAGAATAAGAAATGGCTACTTGTGGACATAAAGC
TTCGTAAGAAAAAACGCTTCAACTGCCACTCCAAAAAATATTTGTCCAAA
ACGATGAGTATGTTAGAAAGCATTTCTATAAAAATCAGCTCAATAGGGTT
TCCTTCGTCTGAAATATTGATAAAAAAGTTGATGCAATCAGTTTCGAAAT
TAGACGTCCAGTCTGGGACCGACAAAATCGAAAGTAAGAAAAAGAAGACT
CTACATTGCAATTAAAACATTCCAGATGCTGAGAAAAAAAGAAAACTTTA
CATTACGATCAAAACATTCAAGGGGCATGCCCGCGGTCTTTAACTTGACA
ACTCCAATGCGAAGTTTCTAGCTCCGGATTGCAATAACAAAGGAAACCGG
TATATTGAATCTCCGGGTAGACATAAAAAATTCCCGCGTTTTTATCAAAT
GAAGACTCTCCATAGACCGCCACTTTCAAAACAAAACAAAAACAAACTTT
AGAAAAAAATGGCAACTTGAAGAAAAATTCTAAAAAAATATGCCGAAGGG
AAATGTAAGTGAGCTATTTTAAACAAAAGAACGAGTGCAAAGAAATGAAA
TACGGGAAAGCTTATGAGTTTTTTTATCATCCTGATCAATTCATATTTTC
ATATAATTCTGATTTTCTCTTTTTAGCGATCGGTCGCAGACTGTTACGTC
GGTGGGGAACTGGGCACTAGTACCGCTCACTTCAAAAGTTTTTTATTCTA
AGAAGATCGCCTCAAATAAAAAATCAAAACAAACACGAAGAGCATGTTAA
AAGTTGTCTAACCGTTGGTCGAAAAGGATTTTCAAAAAAGTAAAAAGTTA
GTGAAAAATTTGAATCACAAAATTTTGGCCGCCAACTGGGCAGGGTACTC
TAGCCCTCAAATGAATGATCTGTCTGATCATTGAAATAGTTAAATTAAAA
CAAACATGATTCACAAAATTTACAGATTGTAAAATGTACCGTGAGTGGTA
TTATTATTATTATTATAAAAAAAAAATTCTATGTACTTAAAAACATTCCC
TCTCCAAGTTGAACAATAAACTATTGCAAAAACTCTCGAAACAAAACATC
TAACAAGATTACCATAATGGCAAGATGTGATAAAAAAGTATGAGTTGTAA
AAATAATTACCTCTATTATTCTGAATCTGTTGCTCGTGTTTTAAAACTTT
AACAAGTTAACAAGCAATTATTGTTATTTGGTTCAATTGGTTCAGTGTAT
CAAATCTCTCAGTTTAGTTGACACTTGGGTATCTTCATTTCGTCACAGCG
AGAGATTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCCATCGGATT
AAGGCAGGGCTGTCGGTTTTAGGGCCACTCACGGTAAAAATCACTTGCTC
CGAAAGTACCGGAAGAACTCCGGAACTTTCCAGAGAGAAAAATAGTTTAG
TTAAAATTTTAGCTGCTCCGGAAAACTCTGGAAGTTTTTAGAACGCCTCC
TCCACTTTTACGGAATGGTATTTGGTAATTTTGTTGACCAGTTTTCCAGT
TCAGAAATTCAATTAAAATGCACTTCCTTGACTAAGGCGAACCCTAAAAA
TATTTTTGTTTTTGGTCCACCGGGTGACGAAAAAAACACTTACCCGGCCG
GCCGCAAAAAAATTTTTTTTGCTAAATTTTGATCCCAAAACTCAATTTTT
TAAAGCACTCGTAGAAGTGCGATTATTCAAATACTTAATTTTCATCGTTT
ATATTTTCAATTGTGTTACAATATCTCTAAGAACTGGACACTCTCTTTCA
TTTCGAATATTTATCTTCAATTGCTAAAGGCTCCAAACTGTGATTACGAA
GTGAACTTTTTTGAGAAAAAAGTAGAGTGAGAGAAACATTTCCACAATTT
TTTAAATCCTCACTTTATGAATGTTTCTTTTTATTTTACTCACAAGTCAG
CATGATTCCTTTTATAAAAACAAAGCTGTTTACTTACTGAAAAGTCCCCA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAAAAAAAACATTCTTAAAAGTTGAGTTGCAAGCAAGAATTAA
CAAAAACAATGCAGGGTTTAGTTTGAGATGAATAAAATTTCATTTCTATA
ACAATGATCATGATAAAACCTTCATTCCAAGTGATTTCTAGGCGTGCATT
TTACAGTAGAATATAAAATATCACGTGCGATAAATGAAAACGCCTCAAAA
AACTGATTCACGAAAGTTTTCCAAACAAACAAACTAACCCTAACGATGAT
GTACGAAAAAAATGCGGCCGGGTGACCACGAAATAAATTTTCACTTGGCC
AGTGGACCGGAAACAAAATTTTTTTTCGGTTGTTTGTTATATTTCGTATC
CTGTTCCTTTTTTCTCGTTCTCGTTCTTGTTACTCTTACCGTTCTTACCC
CCTTCCCCCAAAGTGGCCCCTGGGTGAGACAATTTTCAAAGTGCCTAAAA
GTTTGAAAATTATTCCATGGACAGCCACTATAAATATGTTTTATTATTAT
TTTTTTATTATTATTATTACCTTGCGTGAAATGTTTGTCTTTATTTTAGT
TTGTTTCTTTAAAAAATACCCCATTGCATATGAGACCATTAGACATGTAA
GGGCAGTTATCTCAGAATAATAGAGGAAATTATTTTTACAACTCACACTT
TTTTGATCATATTATAATTGACATTTTGACATTATAGTCATCTTGTTAGA
TGTTTTGTTTCAAGATTTCTTGCAATATTTGTAAACATATAATTCTTTTT
CATAGCAGTTATTTGGGGGTTGCTCGGATTTAGGCTGGGCTGTCAGATTT
AGGACCACTGACCTGTATCACGTTCTAAAAAATCATTTTAAAACATGGTT
ACAAAAATTGCCCCAAGGTGATATGGACACTTTGACTGGCACTTTGGTAA
AATAAAATACTTACAGTCCTTTGAAGATGATGGTTCAGCCATTATAAAGA
AATTGAATTTGTCACATTAGCTATATTTGAAAGCATCACCATGAGTCGAC
TGATTTTTTAAATATATGCGTGTGTGCAGTTAGCGGAAGTGCAGACCAAT
CAGCAAAAATCGTGTGAATCGTGGAATCTTCTGATGTTCCGGAGCACAGA
AAAACAGCACTTTTTGCTCTGGACGTTTTTGGAGCGCCCATAGGGTCCTA
AAAATGGGCACAACCAAACTACTGTTGTTTTGTATAAGATTCTTGTCCTT
TCCGGGAACCAGGATAACCAGCATGAGATTGGAAAGGGTTTGTTTTTAAA
GGTATTGTACATTTGTAATTAACAGTAAATTTACAGTAAATTGGTCTAAT
GTCGACATCCCACTTTTAACTTTGACATCCTTCTTTAGAGATAGGAATAA
TAGCAAGGGCGGAATCACTGATGGACTCCTCAACTGATTGCTAAACAAAG
TTAGTTTCAATCATCGATTTCGACCTATGGAATTATGGAATTGTATTTCA
TTCTAGAACACAATGTTTTGAAAGCTTCAGTGTTCTTCCTAAAGAAATAA
AATTCATAATGGCAGACTTTGGCATATATGACCATTGTGAACCACTGTGA
TTTTCCTTGAGTGTTCCCAGAATACTTTCAACACCAAAAGATTTCAGGAC
CCTATTTGAAACCACTTTTGAGATTTTAGCCTGAGAAAGTTAGACTTTAA
CTCGAAATATCACGTTTTAGTAGGAAATGCAATTCCATAATGGCAGACTT
GGGCAAATTTAAAACCCAAACCATTTTGGTTCTCCCAGAGTATATCTAGA
ATACTTTCAACACCAAAAAGTTTCAGGACCCTATTTGAAACCATTTTTGA
GATTTTAGCCTGAGAAAATTAGACTTTAACTCTAAATATTGCGTTTTAAG
TGGAAATGCAATTCCATAATGGCGGACTTTGGCAAATTTCTAACCAAAAC
CATTTTGATTCTCCCAGAGTTTTTCCAGAATACTTTCAACACCCAAAGAT
TTCAGGACACCATTTGAAATCATTTTTGAGATTTTAGCCTGAGAAAACCA
AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNACAAGACACCATTTAGAAACCATTTTGAC
CCTTTACTGGGCTTTCATAGTCTTAAAATGGGCAAAAAATGCCATTTTTA
CTCATTTTTCGCTCTAGTGGGAATCAAAGACCCCCCTGGGGAATGCTGGA
TTTTTTACCTAGGAGGTTAAAAATTGCGCAAAATGTCTTACAATAGATAA
TTTTTCACAAAAAAATACTACACTTTGAATTTTTTGACATCATGCTTAAA
ATGGGAGTTGACGATATACCCTATTTCAACTAGCCAATGTCCTTGTCTTT
TTCTGCCAGAAAAGTGGCAAAGAAATCTTAGTGTGGAAATGGAAATCTTT
ATACAAACAAAGGTATGTTTTCATACAAAATCTACAGGAAATGCATATTT
GGACTTTGTACCCAGCTGCACAAAAACACTTGTCCTGCAAAAGCTGGATG
AAAATCAGTTTTTTGAAATTTTCAAAATAGCACCACATAGAAGATCTTTC
AAATTTAGCACCTTAAACTTTGTGTAATCCCCCAACCTGTCATAGAAACT
ATCTGGTCTGCAAAGTAGTTTGAGCAATTTTTTTAAACATCTTACTCTGA
AGGTTTTATTTATTTTTCCACCAGTCCCCTGAAATCAGAAATACATGTTG
ATGGAATGAAGTCTTGTGCTTTGAAATGTATTAATGTTGGTGGAGGTTCT
TTTCCTGGTGAACTTCTTATTTTAATTTTGAAAATTAAAGAATCCTCCTT
TTTAACATCCTTGTTTGGTAACTAAAAGATGGAACCTTTGTTTTTTTTAT
AATTTTCCCCTTGGAAGTTGATATTTTATGAAAAAGGGTCTTATGTCAAT
TATCATATCTTAGTTTAGTCAGTTTATCCTCACTGAGTATTTATTCCAGG
TCCAGGTTACTTAGTAACCAAAGGACAGATCCCCTCTTGATTGGACACAA
ATAAATAATTAATACTGCAGCGATTGGATAACGAAATATATGTACTCTCG
AGTTCTTGAATAAAATGATAGAATTACCAACTTTTCATTGTGATTTGGGT
AATAAGGAGGGAAAAGCAAATTTTTGAGTTTACCTTATAATTATTTTCTC
ATGTTGCTACTGCTTATCTCTTAGGTCTAAATAATTATTTAGAATGGATA
CTCTTGGGCAGGAAGAAACGAGTCAGCCATCAGCAGTTTCAAGATTCTTT
TTATCCATCTCACAGGTATAAGTTACATATAATAACATTTTCAACACCTA
TCAGCCCTTAGCGGTGCAGCTAACTTTAGCTAGGAGAAAAGAAATTCTTT
CAACAACGATATCAAAAAACATTAGTACAGGAGCACTCCTGTGATGTATG
TATGTAATAGTTTATTTCAAGTTGACGAACAGGTAACAACAAAGGCTAAT
AAAAGTCAACGCTACTTTACAATTTGTAATGTGATTACAATAGATAATAG
TAGGAAACGTGAATTTGTTAAGCTAAACTGCTAAAAATGGTTCCCTCCAC
CACCTTAGAGACTCAGGGCAATGTCTCTCATATGGGTTAGGGTTTTATTT
TGAAGGAATTTGCTTGGTTTGTAAGAATTTTGTGTGCCGAGAAAGAAATT
TCTGGTACATTCATTATTGCAGTCCCCTAAAAAGCTGATCGCGCTGCTAA
GGGTTGGTAGGTGTATTATTGAAAAAATGTTTTCCTATTGTTCCTTTTTC
ATATGCAGTATGTTGGGAAGGAATTATATGATTTAGAATCAGGGGAAACT
TTATTTTGAGGTTTCAACATGCAACATTTTGGCACTAAATGTTCTAATAT
AAAGATTCTCGTCCAACTAATATAAAGATTCTTGTTTGACTTTTCTTTCC
AACATTTTTTTTTCAGCGGTTTCAAGTTATTTTGGACAAAACAGTTCCCC
ATGGACTTTACAGATGGGTGTTCTCCTTATTCTTAGCAATAACGTATATT
ATTCGAGTGTATTTACTACAGGTATGTGTCTTATTACAAATTAGAAACTT
AAGTTCCACGGAATGTGGATGATATTTTTATGATTTCACTTTTTTCTAGC
TTTTTAACGTCAATTTTCAATTTTACAGTCATTTCTTGTTATACATTTGA
TAAATGTGGAAACATGAAACTCTGAGTTATGTACTCATTGTAAAATTTTT
AGTTTTTGTTTTGATGGATTGAAAGATAACTTTCCTTGATAATGATTTTC
TAATATGAAGGTTATACTTTTTGCGTTTTTTCCGCCTCGTGGGGTGTTAT
TCACAACCACCTTTAACGTATTTCTAAGTAAAAGGGTACCCAATTTGTTG
ACATTAAAATTTTTACAGCGTTGCCAACACCTCTAGTCAAATTAGTTCTT
CCTATTATAATTGCAATAATTAAACTTTTTTCTTTTTAGGGATGGTACAT
CGTAACATATGCTTTAGGAATATATATTTTAAATCTATTTATTGGTTTCT
TAACTCCGCGAATCGACCCGTCAAATCAAAACAGAGGTGAGTCAATAATA
GTTTGACAATATCAAATATTGCCTTTCTCTCAAAGCGCCTCGAGCAGGTC
AAGACTATCGAATTTTTAGTGATTCAGTGGCATTTTTTTGGACTACATTT
TCTTTAATTTCAGTTCTTTTATCTTAAACCCCTATCTTAGTTTATTAGGC
TGTGTTTACAATTTAACTTTATTATATGAAGCATAAAGTTTTAAAGTTTT
AGTTCCACATACTATATGAAGCATAATTTGTCCGTTATGAAACAGAGAAT
AGTATGTGGAACTAAAACTTTAAAACTAACTGCAAATAAAACCTCTATAC
AGGGCCCGCGCCACCGCCCCCCCACTTTTTTGCAAAGCAAAATAAAAAAT
TTCTCTTCACCTAATTATTTTTATCTTTTCTGAGCGCGTGCCAATAAAAA
CGTTAGAACCTTTCTAAAAGGGGACAGATGGACACTAATTATACTCTTTT
GTTTTAAACAAACAAACTTAACAGTTTTCTTTCGGAAAATCAGAACAAAA
AAGAAGCTGTTTTAGCCAAATAAGACAGGTCAAAATCGAAAATTTTCCGG
CCCTCCTTAGTCACTATATTTTTGTTGGCCCCCTCACTTTCAAAATCGTG
GCGCGGGCCCTGCGTATAGACTATGTTCAACAATATCTTTATTTCCATTT
TGTCTTTTAGATTTCTTCTCTGAAATATCAGATGACGAAGAAGGCCCTGG
GTTACCCACAAAAAGGGACGAAGAATTCAAGCCATTTATCAGAAAGTTAC
CTGAGTTCAAATTCTGGTATTCTTCTTTGACTCAGTATTGATTTCTTTGT
TTAAAATATCGACATCAGCTGTCCTTATTTTCGATTTACTACTTGAAACC
CCTTTCGAGAGGGGCTAAAAGGTCATGGGGAGCCGTAGTCTAATTTTAAA
CCCTACGGGGAATGTACTGTTTCTGAACTACGTTTTGGGCTACTATTGGG
CGCTTGAGTTAGTTTTTATGCATTTTTGACAGTTTAACACAAAAAATTGT
TGCCTAATGGGGTTTAAAACCACAAAGAAAGTAATTTCTCCCGTAAGAAA
GTCAATGATCTTTTCCATTTTCCCCTTAATGTTTGCTTCATCCTTGTTCA
CAGCTTTTACGGGGTCCCTAACATTTCTCTTAATAGCGTTCCGCAACGCA
TACGTCATAATTACTTTTCACTTTTTTTTGACATTTGTACGAGTTGCAAT
CCCACAATGCGGCTCAATTAAAGATACGTGCAAGTTGTTTTATATCTTTT
GTCAAATGACGCAATTAACGTGCAAAAGAGATTAACGCAAAGGTTGATGG
GATTGGAACTCGTACAAACACATCGAGAGTAATGATTATGTCAAAAATAA
AATCNCGCAAAGGTTGATGGGATTGGAACTCGTACAAACACATCGAGAGT
AATGATTATGTCAAAAATTAAATCTATTTTTAGATTCAGCGTGGTGCGCT
ATTAGGGGACATCTCGTTTTGACAATTTTCAAAATATCTTTTGTGTCTTT
TTTTTCAGGTATTCATGCAGTAAATCGATAGTAATTGCTACAATATGCAC
GTTCTTTGAGATGTTCAATGTTCCTGTCTTTTGGCCCATTTTGGTTATGT
ATTTCTGCATCTTATTCGTCCTGACTATGAAAAGACAAATTAAGGTAGAT
ATTGTTTGGGTCATGCTTTTGTCATTAACTAATCTTCTAGGCACTAAGTG
TAAATAAGGTTCTGTGAAAAGTAGATGCTAAACAATATTGATAGGGTTTG
TTATGGAGTTTGTACAAGTTTAGTGGTCGTTCTCAGTAGTTTCAATAAGG
ACAAGACTGAGCGATTTTGTGGGATTTTAGAAAATCTATGTTTTAAGGGT
ATTTTAGGTTTCACGGCGGATGGGCAAAATGTTTTTTTCACAGAGGCTTC
AAAATTAATTTTGTTGGGAATTTAATTTGGCGGAAGAAGGAAATTTTTGT
CCAAAAACGCAATTAACTACTATATATAGTCTATTGAATTTCGAGATGCG
ACGCCTGATACAAATCGAATACTTTTTGGACCTACCCCGGTGGAGGTCCT
ATAAATTAACCTTTGTCCGTTCGTTCGTTCGTTCGTTCGTTATTAGCTTT
CCTCATGATTGGCTCGTTAGTTTTTTCTGATTTTTTGCACAAAGATGCAT
AACTATAAACCCTCGAATGTGAAGAAGCCCGATTTTGGGCAAATTTGGGC
CAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTTGGTC
GTTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCGTAGGTAA
AAATTGGCTTAAGCAGATTTTTGCAAAAAAAATTTGTTGGCTCANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCAAATTTGGGCCAAAAAACGGCTAAAAAATGTGTTT
TTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCAG
GAAAGTAAGGTATCATCATAGGTAAAATATGGTTCAAACAGATTTTTGCA
AAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTA
CTAATAAGCATACATCAATGTTCTTAAAATTACTGAATTTTTTGATGAGA
TATGTTTTTTTGCTCTCGAACTCTTGAATATGAAAGAATATCTCAAGAGC
ATGAAATTTTGGTTTCTAAACGTGTTTTTTATAAGAAACAAACAACCAAT
TTTAATATATCGTCACTATTTGTGTTCTGAAGATATTATGTAGATGTTAT
GTAGATATCAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAA
AAGTATCACTTGTTTTAATGATAGAATAAAATAAGAAGAATTCTACAAGC
GTAAAAAATGCTAAATTTTCAGTCACTTTAACTTTTTCTTTCATTTTTCA
GCATATGATCAAATATAGATACCTTCCTTTCACACACGGTAAACGCAAAT
ACCAGGGAAAACCTGACGGAGACGTTATGATGCAATAAATCGTACACCCA
AAAAATATCGTGGTTAGAAAAATTGTTGAAATTTTAATTTAAAGAACTTT
ATACAAAATAATTATTTTAAACACAAAAAGAGTTTTTATCGAATGGATAT
TTTATTGGATGACAATGTTAATACTTTGGTTGGTTGATATCTTGATGGTT
GTACAACAGTTTGAGAAAACCCTTTTGATGCTTTGTCCAGAGATTTTATG
AGTCNTCTTGATGGTTGTACAACAGTTTGAGAAAACCCTTTTGATGCTTT
GTCCAGGGATTTTATGAGTCACGTATACACCTTCTTCTGTAAAGTTCTCG
GTGTTTTGATGACAGATAAACATTTCGAACTGACTCATTCAGATTTAGCA
TGCATAAGTTGTTTGGTTTGTTTATTACAATCAAGTCTGCTAAATTTGCA
GTTCATCTAGTGCTTTGAGTTTAGACTTTATGACAGAAATGACTCGCTTA
GTTTTGATGAGAATGAAGTATCACTTAAACAGATTATCATACTATTTCCC
TGCTTTTCATTTCTTTTTGTGCTTTCAACAAAAGGCAAAATTAGGCAATA
TATTAAATACATAGGAATGCGGGAGTGACACTTGTACTAAATTACTAAAA
CAGTTTTATTATTAAGTACTTGCAGTATGTGATATATTTATTTTTTTGAT
ACCAAAAAGGGTTTTTAAGTTGTTTTGATCTAATTAGCAAGGAGTCTCCC
TAGAATTTCTTATTTTTTGCTGTCTCCTTCTCATAGATTTGGGTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTATATTATCTACGTCTGTTTCACAAAAT
TAGTACTCACCAGTAAAACTTTCCGTCAGGTGCTTGTGTACGCGCTTTTT
TATATATAAGAACCAGGAAAATTTAGCTAAGGCTGGGCTATTCTTTATAT
TTTGAAATTTTCAGGATTAAATGTTCTTACGGTGTCTTTAATACACATAG
TTTCATTACTCAAAAACTTAAAATAGAATCTGTTAAAATCTGAGATCTGA
GAGGCTCATGATTGTTCTTAATTTGTTCTTAGGTTTTGGTCTATTTTCAG
CCTCGTGTTCATATAAAATTGTTCTTATAAAAAAGCGTGTTGTGTGAAAT
CTTGAGGATAGCCTTATTTGTATTTTTATCAAGGCGGTTACTTTTTTAGA
CGTTATATTTTATGTTACATTAACTTTGTTTATAAATACGAATAATGTAG
ATTTTTTGCCCTTTTTTGTTGTTTTGAAATTTTGAAGAAAAAGTTACAGC
CCTTAGGTTTCTTGCGGTCTATCCAAAAAAAATCCTTGTATGTCTGTCAT
TTCTTTTTAGTCTAACCATGGACATATAAACGATTGTTCCGTCACAATTT
TGTTTCTTTGAATTACTT

Coding sequence (CDS) from alignment at scaffold_113:10548..27615-

>TCONS_00046518 ID=TCONS_00046518|Name=TCONS_00046518|organism=Clytia hemisphaerica|type=CDS|length=3618bp|location=Sequence derived from alignment at scaffold_113:10548..27615- (Clytia hemisphaerica)
CATATGATCAAATATAGATACCTTCCTTTCACACACGGTAAACGCAAATA
CCAGGGAAAACCTGACGGAGACGTTATGATGCAATAAGTATTCATGCAGT
AAATCGATAGTAATTGCTACAATATGCACGTTCTTTGAGATGTTCAATGT
TCCTGTCTTTTGGCCCATTTTGGTTATGTATTTCTGCATCTTATTCGTCC
TGACTATGAAAAGACAAATTAAGATTTCTTCTCTGAAATATCAGATGACG
AAGAAGGCCCTGGGTTACCCACAAAAAGGGACGAAGAATTCAAGCCATTT
ATCAGAAAGTTACCTGAGTTCAAATTCTGGGATGGTACATCGTAACATAT
GCTTTAGGAATATATATTTTAAATCTATTTATTGGTTTCTTAACTCCGCG
AATCGACCCGTCAAATCAAAACAGAGCGGTTTCAAGTTATTTTGGACAAA
ACAGTTCCCCATGGACTTTACAGATGGGTGTTCTCCTTATTCTTAGCAAT
AACGTATATTATTCGAGTGTATTTACTACAGATGGATACTCTTGGGCAGG
AAGAAACGAGTCAGCCATCAGCAGTTTCAAGATTCTTTTTATCCATCTCA
CAGCATATGATCAAATATAGATACCTTCCTTTCACACACGGTAAACGCAA
ATACCAGGGAAAACCTGACGGAGACGTTATGATGCAATAAGTATTCATGC
AGTAAATCGATAGTAATTGCTACAATATGCACGTTCTTTGAGATGTTCAA
TGTTCCTGTCTTTTGGCCCATTTTGGTTATGTATTTCTGCATCTTATTCG
TCCTGACTATGAAAAGACAAATTAAGATTTCTTCTCTGAAATATCAGATG
ACGAAGAAGGCCCTGGGTTACCCACAAAAAGGGACGAAGAATTCAAGCCA
TTTATCAGAAAGTTACCTGAGTTCAAATTCTGGGATGGTACATCGTAACA
TATGCTTTAGGAATATATATTTTAAATCTATTTATTGGTTTCTTAACTCC
GCGAATCGACCCGTCAAATCAAAACAGAGCGGTTTCAAGTTATTTTGGAC
AAAACAGTTCCCCATGGACTTTACAGATGGGTGTTCTCCTTATTCTTAGC
AATAACGTATATTATTCGAGTGTATTTACTACAGATGGATACTCTTGGGC
AGGAAGAAACGAGTCAGCCATCAGCAGTTTCAAGATTCTTTTTATCCATC
TCACAGCATATGATCAAATATAGATACCTTCCTTTCACACACGGTAAACG
CAAATACCAGGGAAAACCTGACGGAGACGTTATGATGCAATAAGTATTCA
TGCAGTAAATCGATAGTAATTGCTACAATATGCACGTTCTTTGAGATGTT
CAATGTTCCTGTCTTTTGGCCCATTTTGGTTATGTATTTCTGCATCTTAT
TCGTCCTGACTATGAAAAGACAAATTAAGATTTCTTCTCTGAAATATCAG
ATGACGAAGAAGGCCCTGGGTTACCCACAAAAAGGGACGAAGAATTCAAG
CCATTTATCAGAAAGTTACCTGAGTTCAAATTCTGGGATGGTACATCGTA
ACATATGCTTTAGGAATATATATTTTAAATCTATTTATTGGTTTCTTAAC
TCCGCGAATCGACCCGTCAAATCAAAACAGAGCGGTTTCAAGTTATTTTG
GACAAAACAGTTCCCCATGGACTTTACAGATGGGTGTTCTCCTTATTCTT
AGCAATAACGTATATTATTCGAGTGTATTTACTACAGATGGATACTCTTG
GGCAGGAAGAAACGAGTCAGCCATCAGCAGTTTCAAGATTCTTTTTATCC
ATCTCACAGCATATGATCAAATATAGATACCTTCCTTTCACACACGGTAA
ACGCAAATACCAGGGAAAACCTGACGGAGACGTTATGATGCAATAAGTAT
TCATGCAGTAAATCGATAGTAATTGCTACAATATGCACGTTCTTTGAGAT
GTTCAATGTTCCTGTCTTTTGGCCCATTTTGGTTATGTATTTCTGCATCT
TATTCGTCCTGACTATGAAAAGACAAATTAAGATTTCTTCTCTGAAATAT
CAGATGACGAAGAAGGCCCTGGGTTACCCACAAAAAGGGACGAAGAATTC
AAGCCATTTATCAGAAAGTTACCTGAGTTCAAATTCTGGGATGGTACATC
GTAACATATGCTTTAGGAATATATATTTTAAATCTATTTATTGGTTTCTT
AACTCCGCGAATCGACCCGTCAAATCAAAACAGAGCGGTTTCAAGTTATT
TTGGACAAAACAGTTCCCCATGGACTTTACAGATGGGTGTTCTCCTTATT
CTTAGCAATAACGTATATTATTCGAGTGTATTTACTACAGATGGATACTC
TTGGGCAGGAAGAAACGAGTCAGCCATCAGCAGTTTCAAGATTCTTTTTA
TCCATCTCACAGCATATGATCAAATATAGATACCTTCCTTTCACACACGG
TAAACGCAAATACCAGGGAAAACCTGACGGAGACGTTATGATGCAATAAG
TATTCATGCAGTAAATCGATAGTAATTGCTACAATATGCACGTTCTTTGA
GATGTTCAATGTTCCTGTCTTTTGGCCCATTTTGGTTATGTATTTCTGCA
TCTTATTCGTCCTGACTATGAAAAGACAAATTAAGATTTCTTCTCTGAAA
TATCAGATGACGAAGAAGGCCCTGGGTTACCCACAAAAAGGGACGAAGAA
TTCAAGCCATTTATCAGAAAGTTACCTGAGTTCAAATTCTGGGATGGTAC
ATCGTAACATATGCTTTAGGAATATATATTTTAAATCTATTTATTGGTTT
CTTAACTCCGCGAATCGACCCGTCAAATCAAAACAGAGCGGTTTCAAGTT
ATTTTGGACAAAACAGTTCCCCATGGACTTTACAGATGGGTGTTCTCCTT
ATTCTTAGCAATAACGTATATTATTCGAGTGTATTTACTACAGATGGATA
CTCTTGGGCAGGAAGAAACGAGTCAGCCATCAGCAGTTTCAAGATTCTTT
TTATCCATCTCACAGCATATGATCAAATATAGATACCTTCCTTTCACACA
CGGTAAACGCAAATACCAGGGAAAACCTGACGGAGACGTTATGATGCAAT
AAGTATTCATGCAGTAAATCGATAGTAATTGCTACAATATGCACGTTCTT
TGAGATGTTCAATGTTCCTGTCTTTTGGCCCATTTTGGTTATGTATTTCT
GCATCTTATTCGTCCTGACTATGAAAAGACAAATTAAGATTTCTTCTCTG
AAATATCAGATGACGAAGAAGGCCCTGGGTTACCCACAAAAAGGGACGAA
GAATTCAAGCCATTTATCAGAAAGTTACCTGAGTTCAAATTCTGGGATGG
TACATCGTAACATATGCTTTAGGAATATATATTTTAAATCTATTTATTGG
TTTCTTAACTCCGCGAATCGACCCGTCAAATCAAAACAGAGCGGTTTCAA
GTTATTTTGGACAAAACAGTTCCCCATGGACTTTACAGATGGGTGTTCTC
CTTATTCTTAGCAATAACGTATATTATTCGAGTGTATTTACTACAGATGG
ATACTCTTGGGCAGGAAGAAACGAGTCAGCCATCAGCAGTTTCAAGATTC
TTTTTATCCATCTCACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029693XLOC_029693Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046518-proteinTCONS_00046518-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046518-exon-scaffold_113-1575043694:27582..27615TCONS_00046518-exon-scaffold_113-1575043694:27582..27615Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1575043694:16801..16891TCONS_00046518-exon-scaffold_113-1575043694:16801..16891Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1575043694:16045..16149TCONS_00046518-exon-scaffold_113-1575043694:16045..16149Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1575043694:15530..15626TCONS_00046518-exon-scaffold_113-1575043694:15530..15626Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1575043694:14750..14855TCONS_00046518-exon-scaffold_113-1575043694:14750..14855Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1575043694:13872..14007TCONS_00046518-exon-scaffold_113-1575043694:13872..14007Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1575043694:10548..12014TCONS_00046518-exon-scaffold_113-1575043694:10548..12014Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1510915933:27582..27615TCONS_00046518-exon-scaffold_113-1510915933:27582..27615Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1510915933:16801..16891TCONS_00046518-exon-scaffold_113-1510915933:16801..16891Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1510915933:16045..16149TCONS_00046518-exon-scaffold_113-1510915933:16045..16149Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1510915933:15530..15626TCONS_00046518-exon-scaffold_113-1510915933:15530..15626Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1510915933:14750..14855TCONS_00046518-exon-scaffold_113-1510915933:14750..14855Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1510915933:13872..14007TCONS_00046518-exon-scaffold_113-1510915933:13872..14007Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1510915933:10548..12014TCONS_00046518-exon-scaffold_113-1510915933:10548..12014Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1491911889:27582..27615TCONS_00046518-exon-scaffold_113-1491911889:27582..27615Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1491911889:16801..16891TCONS_00046518-exon-scaffold_113-1491911889:16801..16891Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1491911889:16045..16149TCONS_00046518-exon-scaffold_113-1491911889:16045..16149Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1491911889:15530..15626TCONS_00046518-exon-scaffold_113-1491911889:15530..15626Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1491911889:14750..14855TCONS_00046518-exon-scaffold_113-1491911889:14750..14855Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1491911889:13872..14007TCONS_00046518-exon-scaffold_113-1491911889:13872..14007Clytia hemisphaericaexon
TCONS_00046518-exon-scaffold_113-1491911889:10548..12014TCONS_00046518-exon-scaffold_113-1491911889:10548..12014Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_113supercontigscaffold_113:10548..27615 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.3023	21.7577	10.4877	6.88338	46.4296	31.2263	53.776	56.0941	36.7364	38.3085	29.0579	24.8437	20.5989	18.6561	24.3355	25.9027	31.5893	25.6653	15.9153	19.9807	28.3878	27.9953	34.7333	34.5937	23.3716	30.7948	51.8955	35.4073	57.4821	50.8795
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
[Close]
BLAST of TCONS_00046518 vs. Swiss-Prot (Human)
Match: RER1 (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 4.162e-81
Identity = 119/194 (61.34%), Postives = 152/194 (78.35%), Query Frame = 3 
Query:   57 DTLGQEETSQPSAVSRFFLSISQRFQVILDKTVPHGLYRWVFSLFLAITYIIRVYLLQGWYIVTYALGIYILNLFIGFLTPRIDPSNQNRDFFSEISDDEEGPGLPTKRDEEFKPFIRKLPEFKFWYSCSKSIVIATICTFFEMFNVPVFWPILVMYFCILFVLTMKRQIKHMIKYRYLPFTHGKRKYQGKPDG 638
            D++G+    +PS V RFF  + Q +Q  LDK+ P+   RWV +L L+  Y+IRVYLLQGWYIVTYALGIY LNLFI FL+P++DPS         + D ++GP LPTK++EEF+PFIR+LPEFKFW++ +K I++A +CTFF+ FNVPVFWPILVMYF +LF +TMKRQIKHMIKYRY+PFTHGKR+Y+GK D 
Sbjct:    5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPS--------LMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYRGKEDA 190
The following BLAST results are available for this feature:
BLAST of TCONS_00046518 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RER14.162e-8161.34Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1[more]
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