TCONS_00046579 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046579
Unique NameTCONS_00046579
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4046

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046579 ID=TCONS_00046579|Name=TCONS_00046579|organism=Clytia hemisphaerica|type=transcript|length=4046bp
TTACTATTTACGTGTAAATTCAGCTTTATTGAAAATCACGAGAAGGTCAC
ATGACTGACTCATGAAACTATACTATTCAAGCGCAGCCAccaagctatac
tttaaaaggaCTGGAAAATCgtggaatttttattttttacttttattact
AGCTTGGTTTTACTTTGACTATTTAACCAACCGGTGTAAACAAAGGATCG
CTTTCCGAGAATTTGAAAAGTGAAAGGTGCTGTGTTTTTCGGGAAGTGAG
AAAAAGTCAGCGAAAATGAAGTCCCTTGCCATTTTTATCACTGTTTTAGC
CCTGGTTCATGGAGAAAtcaaaagGCCCAATATTATGGTGAAATAAGCAT
TGGAACACCACCTCAAGCATTCAAAGTTGTTTTCGATACAGGATCATCAA
ACTTGTGGGTCCCCTCATCACAATGCCACTTCTCACCTGCATGCTTTTTA
CACAGCAAATACCATTCTGACAAATCGAGTACTTACAAAAAAAATGGTAC
AGCCTTTGCCATTCGTTATGGAAGTGGAAGTTGCTCTGGTTTCTTGAGTG
AAGATACTGTTACTgtTGCTGGTATCAGTGTGAAATCACAAACTTTCGGT
GAAGCAAAAAGTGTACCAGGAGTTGCTTTTATTGCTGCCAAGTTTGATGG
TCTGTTTGGTATGGGATACCAAGAAATCTCTGTTGATCACGTCGTCCCAC
CATTTTACAACATGGTCAGCCAAAAGTTGGTCGATGATGCTGTCTTTTCA
TTCTACTTGAACAGAAATGCTTCAGACACAGATGGTGGTGAATTGTTATT
GGGAGGTATCGACCAATCCAAATACACTGGAGACATGACATATGTCCCTG
TTTCCATCAAAGGATACTGGCAATTTGACATGGACAGCATTCAAATCAAC
GGTGAAAAAGTCTTCTGCACCGGAGGTTGTCATGCCATCGCTGACACCGG
AACGTCCCTCATCGCCGGACCATCGGAAGAGGTCAAGAAATTGAACGAAC
AAATTGGAGCTACACCAATCGTTGGTGGAGAATACACTATTGATTGCGCT
AAAATCCCAACCCTCCCTGCTATGGACTTCGTCATTGGTGGAAAGAAATT
CACTTTGAAAGGAGAAGATTACATCTTAAAGGTTTCCACCATGGGACAAA
CAGAATGCATCAGTGGTTTCCTTGGAATCGATGTTCCCCCACCACGTGGT
CCCTTGTGGATTTTGGGAGATGTCTTCATTGGTCCATACTACACTGTCTT
CGATCTTGGTAACAACAGAGTTGGATTCGCCAAAACCAAATAATTTGACA
TGACTTTTTAGTATACTGTATACACAAAGTCCCTCAAATAAGTCTTGCAA
AAACTTGGCTCGACTTTGAGTATCTTNTAGTATACTGTACACACAAAGTC
CCTCAAATAAGTCTTGCAAAAACTTGGCTCGACTTTCAGTATCTCACACT
TGCACTttaggatttttcgttttttctattttattgatgtaatattgatt
ctttttgttttttaatggttcaattgtttttcattcgtattttgtatttt
tttaagaatttaggTTAAGCTTTGGTACAATATATAATAACTTTGTAAAA
CAGAAATCGATACAATACTGCTCAGTTTTTTCCCTGTTTGTAATATTTCG
ACAAACGCATCTCAAGTTTTTCGTGTCTGAAAACTTGGATAGATGTCAAG
TAAAAGAGCTTTTTGAATCAACCTTTAAGTAATCCCCATAGAAATCTTTA
TTTTGGTCTTTGAAATATGATTGGGGTTAGAGAACTAGGACGAGAGGAAG
TGAGAAATGAGAAATCACCATGTGACCTGTACAAACACTGACATGAGCAG
GATTTTCAGCCCGTGTTGTTTTAGTAGGTTGTGTGAGAGTAGAGGGACTC
AtcgaatgaaaaagttatttttacaTCCAAAGTTATGAAAACAATAATAA
TTAGTAACAGTCTATCAAAATAATGTCATGAAATTTTCCAGAGTGAAATC
TTTTCGATTAAAATATATGTTGTACACCAAACTGTTATGTTAAAATGTTA
CAATCGTTCGCTTGTATAAAACGTTATTGATATAGTTATGTAACGAATTC
GGTCTTCTTGGATCTGTGGAATTAGTCTAACCTGCCAAATGATTGTGTGT
GTGTGAATTGTTGGAATGAGGGAAATAGTCAGCGTACAGATAGGACAATG
TGGAAATCAGATTGGTGAAAAATTTTGGGAGACGATATGTCTTGACCATC
AAATTCCACTGGATGGAAAGATCAGCCAACAAGCACTTTCTGACCCCCGT
GAAGATATCCTGAAACCTCGTGGGAAGTATGAAGTTTACTTTAAAGAGAT
TGGCACATATGGGGGTAGTGAAGTGCAGTTTGTACCACGGAGTGTTTTGG
TGGATATGGAACCAGGCGTTTTAGATTCGATTCGTGGTGGGAAATTGAGA
GATCTGTTCAAGCCTGACCACATGTTAAACGGACAAGATGGTTCATGCAA
CAACTGGGCCAAAGGTTACCTTCACCAAGGTGGAGAGTATATCGAACAAA
CAATGGAGATCATTCGAAGGGAGTGCGAGTCATGTGACTGCATCCAAGCT
TTCCAATTGGCTCATTCCGTTGGTGGAGGAACTGGGTCGGGATTCGGTTC
CTTGTTACTATGTCGTCTCTATGACGAGTTTCCCGACATTTTGCTCATGA
ATGCCAGCGTTTTGCCGTCGACTCAAGTTTCCGACGTCGTTGTTGAGCCA
TACAATACAATCCTTAGTCTGGCATATCTGGTGGATTATAGCAATGGTGT
GTTTTGTATAGATAATGAAGCGTTGTATAAAATCTGTATGAATAAACTAA
AAGTTGAAAGGATTAATTATGGCACGATTAATGAGCTGATTGCTTCAACT
CTCGGTGGTGCAACCACCAGTCTGCGCTACCCTGGCCAGcTGAATTCGGA
CGTCCGAAAATTATCAGTCAACATGGTTCCCTTCCCACGTCTGCATTTCT
ATATGACTGGATTATCCCCATTAGTTCATGATTATGTGAAACCATACCTC
AAGAATGATATTGCGGAGGTAACAAGAGACTTATTTGAACCTTCAAACAT
GTTGTGTGATTGCGATCCGAGGTCTGGGCGCTACTTAACATTTGCCGCCA
TTTACCGTGGTCAAACGAACACTAGAGAAATCGAAGAAACTattatgaat
tttcaaaataagaacagttcATCTTTTGTGGAATGGATCCCACACAATGC
GAAAGTTGCGACTTGTGATGTCCCATTGAAAGGACAAAGATTGAAAGCAA
CTTTCATTGCTAATAATACCTCAATACAAAACATTTTACGACGTTCGAGA
GACCGTTATTTCAAGATGATGAGACGTAAAGCCTTTCTCCATTGGTACAC
AGCACAAGGAATGGAAGAGCTACAATTCATGGAGGCCGAAGCAAACATCG
TTGACATCATCTCAGAATATGAACAATATACGCATGCGCCTGTTGATGAT
GATATCCCGTCCGAATATTGTGAGCTTGAAGATTCACTAGAGGAGTTGGA
TTCAGGTTTTGGTGGGTTATGACACTGTTGAGATGACACGTGTATAGTTG
AGGAGACAGCTCGAAGAATGGCTTTTTATCGTTGGTCAAATCCATTTGGT
AGAAGACCCCGCAACGATAAGATAGCTTTACACTGATAAGCCCACTATCG
TGATCAACGTGATGAAAAAGTCGGTGAAATTAGTTTAAAAAAGACAATGT
TCCATCTATGAATAACAATCTATTCGATGAAAACAACCCCTCTACTGAAA
GGATGTGCCAACGAACAATATGAAACAGCGTGGGGTGTTTCATATTATTA
AAAACGTTACCTTCCATGACAGCATTACAGAACATATGTACTGGGCATTA
ACCAAAGTCATTAAAAATAAGACATGATGAATTTATTCCGTACGTTGACA
TATTGAAGACCCTTGTTTACATATTAAATTGAGACTTGTGGAATTAAAGC
ACTCATCTGAAAACATGCATTGTCTATAAAGAGAAgtttaatataa
Run BLAST on NCBI

protein sequence of TCONS_00046579-protein

>TCONS_00046579-protein ID=TCONS_00046579-protein|Name=TCONS_00046579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
MREIVSVQIGQCGNQIGEKFWETICLDHQIPLDGKISQQALSDPREDILK
PRGKYEVYFKEIGTYGGSEVQFVPRSVLVDMEPGVLDSIRGGKLRDLFKP
DHMLNGQDGSCNNWAKGYLHQGGEYIEQTMEIIRRECESCDCIQAFQLAH
SVGGGTGSGFGSLLLCRLYDEFPDILLMNASVLPSTQVSDVVVEPYNTIL
SLAYLVDYSNGVFCIDNEALYKICMNKLKVERINYGTINELIASTLGGAT
TSLRYPGQLNSDVRKLSVNMVPFPRLHFYMTGLSPLVHDYVKPYLKNDIA
EVTRDLFEPSNMLCDCDPRSGRYLTFAAIYRGQTNTREIEETIMNFQNKN
SSSFVEWIPHNAKVATCDVPLKGQRLKATFIANNTSIQNILRRSRDRYFK
MMRRKAFLHWYTAQGMEELQFMEAEANIVDIISEYEQYTHAPVDDDIPSE
YCELEDSLEELDSGFGGL
Run BLAST on NCBI

transcript from alignment at scaffold_114:4217..13313+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046579 ID=TCONS_00046579|Name=TCONS_00046579|organism=Clytia hemisphaerica|type=transcript|length=9097bp|location=Sequence derived from alignment at scaffold_114:4217..13313+ (Clytia hemisphaerica)
TTACTATTTACGTGTAAATTCAGCTTTATTGAAAATCACGAGAAGGTCAC
ATGACTGACTCATGAAACTATACTATTCAAGCGCAGCCAccaagctatac
tttaaaaggaCTGGAAAATCgtggaatttttattttttacttttattact
AGCTTGGTTTTACTTTGACTATTTAACCAACCGGTGTAAACAAAGGATCG
CTTTCCGAGAATTTGAAAAGTGAAAGGTGCTGTGTTTTTCGGGAAGTGAG
AAAAAGTCAGCGAAAATGAAGTCCCTTGCCATTTTTATCACTGTTTTAGC
CCTGGTTCATGGAGAAAtcaaaaggtattttatttatttcaatatCTATT
ACTATTGTATGAAGACTTGCTGTTGCAGAGACAACAGCTGAGTGAGATTT
TGGCTAAACAATTGTTCTTCCTTCTCAAtaacaaaacatcaaaatactcc
atttttgtttttcttcactGTTTTAGATGGTGTGTAGATCATCTTAAAGG
GatcgaaaaaaatctttaataatGTGGGGAGTGGCTCATTTGACAGTTTG
ACACCCTTGCAATTTGTAGGCCCATTGTATGCTTATgctttagttttgtt
ttcaactgggtgtttttgttggaaatataTACAGACACTACAGCAGTAGC
AAAATCCAGTCCGGAAATTGCGGCTTGTGCGCCGGATATCTCTGGCATAG
ATTTGAGGTTTGAGATCTGCTGCCTTCAACTTTTCCNAttatttgcattt
tttttattttcactgtcAAAAACTAGTTCCAGCAAAAATTAGCTCCCTTT
TAAGATGCTTTCACATCAATTAGACAAAATGTTTTAAGTTGGGGTTATGG
GGAAAtgctaattttcaaaaactttagatTGTTTTTTCACATACATATAG
ATTTTTTTGTTGGGTTATGCACTTTCATTAGAAATCTAGTCCTAGTAATG
CTCATGCTCCCCACGTGGTTTGATAATATTGCAACATTTTAAATCAATGC
ACTAATGTAATATCTATTGCTGTGACACATGAATTGTTGTCTTTAGAAAC
TGAAACATGATACTTATAACCATTCAAACAGAAagcattttttctttgtt
tatgttAAAATATTTGCACTTGTAATTTAACATGACAATTACAATATTGA
GAAATATGCATCTGTCATTTAAAACATCATTTTACAAGGTCAAACTGATT
GCAAATAATATTCAACCCTGCATCAAGAAAGAAAATCTTGATATAGTCCT
AACAATGGTTTCTTATTAAAGAGTAGATAATTGATTGATTAAAGTTTTAT
CTCCATATAACTGCATATGTAAATGTCTCTACAAATTGAATCTTTAAGCA
CGTACGTAAGCAATTTGTCCCTGTGTGGCCCAAAATCGAATTAAAAATTC
CTGTAGACTACCAACATAACCACAATGTTAGCCAGTAATGTAAACTGGCT
CCTCTGTATACTATCAGgtacacgtttgttttttttaagaaacacacttt
taagaaacatgaggctcagaatgcctaaaaactaagaaacatctaagaaa
catgctaaggctgaaaatgaaaaaatgacatttttaattcgtttttttaa
gaaccttcaaatcaaaacatggaaaaataggctgattatgtcaaaaagtt
tagaaacatgtaagaaacatttaaggctcaaaaggctgatttcttaagaa
acattgaggctgcttggtaaaacTAGTTTCTTAaaaaaaaaaaaacgcgt
aCCTAATAAGCATCCCCTgctaataaaatttttgaaaaacccAAGAGCAG
GACTTAAGGATTTTTgggaaagttccctcttttgccctcctttttcaaat
tttccacccaggaatGAACATTTCCACCCAGCCAGGCCGCTTATTCCTAA
CCCCCCTCTCTCCTTGTTTGAGAGTATGATCTGAGCAGAAGCGGTTGTTC
ATTCGTTTTAGAGATTCACTATAATTTAAATCTTTTAGGCCCAATATTAT
GGTGAAATAAGCATTGGAACACCACCTCAAGCATTCAAAGTTGTTTTCGA
TACAGGATCATCAAACTTGTGGGTCCCCTCATCACAATGCCACTTCTCAC
CTGCATGCTGTAAGTTTACTCAAAATTATGTTACATGGCTACTGTTAGCT
GACTactgaaaatcataaaaaaaattgtaccgggtgcgccacaaaaaagt
ttctctctttgaaactgattttctcaaaatctaagaATAAAGAaaggctt
tacatgattaagaccatttttcagtaattaaacaaataaattttgaaatt
taaggaaCGGAAGGGTTTGAAATGTTCATCAAAATCCTTTCAATTTACTT
TTAACGAAATTTTCCTcatatttttggttctagactggatataGTCTATG
TAACGGtggatgtacctcgaaacccatatttgatgtatttttattgattt
taggaaaattagttttaaagagagaaacttttttgtggcgcacccggtac
caTACAGTCCCGTACTCAAACACACATATAGAAATAAAGCCATTGGATGT
TCATTACATTTTGTCAGTTAGAGTACAATTtacgtaaaattttatttaaa
ctCTAATTTATCTGACAGAACTTTGAAGTTCAAATTGGTATAAATTCCTT
CCTGTATTTGGTTTAAATTCCTTCCTGTATTTGGTTTAAATTCCTTCCTG
TGTTTAACCTTCCACTTAGCTGACATCAAAACTGTAACAATTAGTATAAT
TCAAAGCAATAATCGTATATGGTGGTAAATTTATAAAGCATGATCAATCG
TGGCTGTAAGCCAGGATACTAATAATTTTCCATTTCCTTTTCATTAGTTT
TACACAGCAAATACCATTCTGACAAATCGAGTACTTACAAAAAAAATGGT
ACAGCCTTTGCCATTCGTTATGGAAGTGGAAGTTGCTCTGGTTTCTTGAG
TGAAGATACTGTTACTGTAAGCCTTATTactttacttaattttgcagtTG
TTTGCAGGGTTGTTGTTTGTCTGGGAAGGCTTTACTTTAAACTTTACTTG
ACACTTCATTGGTTCTTTTTTGCCAGACAATTTTGTTCCCACAATTTTGT
CAGAAAAATTTACCGAGGGCAGCTAATCTTCCTAATTTCCACTTACTGTG
ATATCATTTCTTTTAGGAAAACTTTCATATTACCacattttcaatttatt
ttttataggtTGCTGGTATCAGTGTGAAATCACAAACTTTCGGTGAAGCA
AAAAGTGTACCAGGAGTTGCTTTTATTGCTGCCAAGTTTGATGGTCTGTT
TGGTATGGGATACCAAGAAATCTCTGTTGATCACGTCGTCCCACCATTTT
ACAACATGGTCAGCCAAAAGTTGGTCGATGATGCTGTCTTTTCATTCTAC
TTGAACAGGTTGGTCTCAAATATTATTCTGCACTTCTGAAGAACAGCTTT
AATATCAaaacagttgactctcgcttattcgaactcgGTCTGGGAATCTT
GTTTGTTTGAGttacagagagattcaaattgtagaaagtattttaagtgA
GTTTCTCCTCGACGGGGCCTGGTAATAAGTTTGAacaatagaagttcgaa
taagcgagagtctactgtaatttcttattttcatgcTAGCTACTGCTTTT
GATATTCATAGCTATTTTTTTAGTTCATGAAGAATGAAACTTCTTCACAT
AAGAGACTCATGGTTCCTTATTAAAGAAGAAATTGACCCCTTGGTAAAAA
ATAGTGTAGGTGCAAGATTACTTGGTGTTGGTGGGAGCAGTTGTTCGGGG
CAACTGTCCTGTCATGCATTAAAAACAACTCCACAATTGTTGTATCAAta
gattttataaaaaaagaaacttttctcAACTCTTCTAGAAATGCTTCAGA
CACAGATGGTGGTGAATTGTTATTGGGAGGTATCGACCAATCCAAATACA
CTGGAGACATGACATATGTCCCTGTTTCCATCAAAGGATACTGGCAATTT
GACATGGACAGGTAAAACTTTCATGAAAAGGAATTGATTATTTCATAGGA
AACAAAGTTTGCAACCATCAAGCTTTGATAATGATTGAAAACTTTAATCa
atgttttgaaatctttgGAATCTCTTTGTTTGAAATCGTTAAATTTCGCG
TATTAGCACagccgcgaaaattaattctaaAGTAATCGATTTCATATTCC
TTTGAAGCATTCAAATCAACGGTGAAAAAGTCTTCTGCACCGGAGGTTGT
CATGCCATCGCTGACACCGGAACGTCCCTCATCGCCGGACCATCGGAAGA
GGTCAAGAAATTGAACGAACAAATTGGAGCTACACCAATCGTTGGTGGAG
AATACACTATTGATTGCGCTAAAATCCCAACCCTCCCTGCTATGGACTTC
GTCATTGGTGGAAAGAAATTCACTTTGAAAGGAGAAGATTACATCTTAAA
GGTGAAGATTTAAACTTCGTTTATTAATGCATGTGACTAAGCCTTTTTCT
TTGGGGTTTAGCCTTTTCGTAATATCGTCTCTACCAAGTTCTCGTCGAAG
GAGCAAAAAtaatgaagcaaaatttagaTGCATTTTATAATTACTCAATT
ATaatatttccatttttctttGGTAGGTTTCCACCATGGGACAAACAGAA
TGCATCAGTGGTTTCCTTGGAATCGATGTTCCCCCACCACGTGGTCCCTT
GTGGATTTTGGGAGATGTCTTCATTGGTCCATACTACACTGTCTTCGATC
TTGGTAACAACAGAGTTGGATTCGCCAAAACCAAATAATTTGACATGACT
TTTTAGTATACTGTATACACAAAGTCCCTCAAATAAGTCTTGCAAAAACT
TGGCTCGACTTTGAGTATCTTNTAGTATACTGTACACACAAAGTCCCTCA
AATAAGTCTTGCAAAAACTTGGCTCGACTTTCAGTATCTCACACTTGCAC
Tttaggatttttcgttttttctattttattgatgtaatattgattctttt
tgttttttaatggttcaattgtttttcattcgtattttgtatttttttaa
gaatttaggTTAAGCTTTGGTACAATATATAATAACTTTGTAAAACAGAA
ATCGATACAATACTGCTCAGTTTTTTCCCTGTTTGTAATATTTCGACAAA
CGCATCTCAAGTTTTTCGTGTCTGAAAACTTGGATAGATGTCAAGTAAAA
GAGCTTTTTGAATCAACCTTTAAGTAATCCCCATAGAAATCTTTATTTTG
GTCTTTGAAATATGATTGGGGTTAGAGAACTAGGACGAGAGGAAGTGAGA
AATGAGAAATCACCATGTGACCTGTACAAACACTGACATGAGCAGGATTT
TCAGCCCGTGTTGTTTTAGTAGGTTGTGTGAGAGTAGAGGGACTCAtcga
atgaaaaagttatttttacaTCCAAAGTTATGAAAACAATAATAATTAGT
AACAGTCTATCAAAATAATGTCATGAAATTTTCCAGAGTGAAATCTTTTC
GATTAAAATATATGTTGTACACCAAACTGTTATGTTAAAATGTTACAATC
GTTCGCTTGTATAAAACGTTATTGATATAGTTATGTAACGAATTCGGTCT
TCTTGGATCTGTGGAATTAGTCTAACCTGCCAAATGATTGTGTGTGTGTG
AATTGTTGGAATGAGGGAAATAGTCAGCGTACAGATAGGACAATGTGGAA
ATCAGATTGGTGAAAAAGTATGGTTTATTTTGATGGAAGTTTTCttcttt
acaaataaaaatattcctGCTTTATGACTTTTTACATTGTTATCAGTAAT
TGATACTGCGATCAACTTATCGCGGATTTGAATCCATTCGAATAGCAAGT
TCTCAAACCCTCTATTATTTCTCTGAATTGCAAAAACTTTCGAACGCCTA
AATATTTCTGAAATACACCCCTTCTCGcaaacccactgggaacccttccc
gctggaaaaattggccgTGATATCATCCCCTGtagaaaattatcctccaa
ctTTTGTCACCACTGTAAATAATCAGATATGTCACAAATCCCCACTGCAA
AACGTTGTGCTATTTTAcccatccccattgaattttctggctagaaaaca
atgaaattcaaatccccagccatttaaaacatgggaatatcaatccccat
cgagatTTGGTCccttatttttacccccactggctgataaaattcCACct
agtctgtgagaagggggtgttagaATACACGATTTAAGAACGTTACCATT
GTAATTAGAAGCTTAACAGACtgtgaaaaagtttgaaagctTCTATTGAA
TTTCTAATTCTAGTTTTGGGAGACGATATGTCTTGACCATCAAATTCCAC
TGGATGGAAAGATCAGCCAACAAGCACTTTCTGACCCCCGTGAAGATATC
CTGAAACCTCGTGGGAAGTATGAAGTTTACTTTAAAGAGATTGGCACATA
TGGGGGTAGTGAAGTGCAGTTTGTACCACGGAGTGTTTTGGTGGATATGG
AACCAGGCGTTTTAGATTCGATTCGTGGTGGGAAATTGAGAGATCTGTTC
AAGCCTGACCACATGTTAAACGGTAGGTCCTTTTATTTTGCTacttaaaa
atgacaaattcaACACCTTGGGACAATTAAGTTTTAAAAGCTGGAAGGCC
CAGAGAGGAATTCTCAACCTTTACGTGTTACTGATTTGCCCTTCAATCTC
GATGCTTAGGACGGTTAGTATACGTCTAATTTCCTTTTTACTTGGAAAAC
AAACGTTGAAGTTCTAAAAACACACAAACTAGGAGGGAAAGTGAATTCCC
TAAAATCTTAATGTGCATAAATGAgaagtgtaaaaaacctttctcgGTCG
ATGTCCTTCTTGGTCACATTATTTTTACAGTTGATCCATTACTACCAGGC
AATGCTGTTTGCTGCTTTATACTCTTTATCTCGCTTGCTTTTCCTTTATA
AAGAGAGAAACATTCAACTTATCTTTTTTATCCTGCCAAACAGGACAAGA
TGGTTCATGCAACAACTGGGCCAAAGGTTACCTTCACCAAGGTGGAGAGT
ATATCGAACAAACAATGGAGATCATTCGAAGGGAGTGCGAGTCATGTGAC
TGCATCCAAGCTTTCCAATTGGCTCATTCCGTTGGTGGAGGAACTGGGTC
GGGATTCGGTTCCTTGTTACTATGTCGTCTCTATGACGAGTTTCCCGACA
TTTTGCTCATGAATGCCAGCGTTTTGCCGTCGACTCAAGTTTCCGACGTC
GTTGTTGAGCCATACAATACAATCCTTAGTCTGGCATATCTGGTGGATTA
TAGCAATGGTGTGTTTTGTATAGATAATGAAGCGTTGTATAAAATCTGTA
TGAATAAACTAAAAGTTGAAAGGATTAATTATGGCACGATTAATGAGCTG
ATTGCTTCAACTCTCGGTGGTGCAACCACCAGTCTGCGCTACCCTGGCCA
GGTAAATACATATTCTAACTTTCTTTATCAACATCTCATCCGAACATTAT
GTtacttttcatattttcagtAGGACCTATTAGAGAGCGCTGTTATCTTG
TTCAGATAAAATATATGAAATACCTTTATCTATTGCCTGACGATATTTTT
TCTCCTCTTTCATACCCCTATTCTCAAATACCATTCGAAGCCAATATAAC
ATCATGTTAACACTGCTCGTCGAATTTTCTCATTGATGTAGATgtaaagt
aagtatattcatctggtggctgaaTATCTACACATCTTTACGGGATTATA
AAGCAAAACCTTTTACAAAACCGTCACACTTTCAATCATCTCACTctaat
aattctcttttttattcttttcagcTGAATTCGGACGTCCGAAAATTATC
AGTCAACATGGTTCCCTTCCCACGTCTGCATTTCTATATGACTGGATTAT
CCCCATTAGTTCATGATTATGTGAAACCATACCTCAAGAATGATATTGCG
GAGGTAACAAGAGACTTATTTGAACCTTCAAACATGTTGTGTGATTGCGA
TCCGAGGTCTGGGCGCTACTTAACATTTGCCGCCATTTACCGTGGTCAAA
CGAACACTAGAGAAATCGAAGAAACTattatgaattttcaaaataagaac
agttcATCTTTTGTGGAATGGATCCCACACAATGCGAAAGTTGCGACTTG
TGATGTCCCATTGAAAGGACAAAGATTGAAAGCAACTTTCATTGCTAATA
ATACCTCAATACAAAACATTTTACGACGTTCGAGAGACCGTTATTTCAAG
ATGATGAGACGTAAAGCCTTTCTCCATTGGTACACAGCACAAGGAATGGA
AGAGCTACAATTCATGGAGGTAATTTATAGACATACATATCTATAGACAT
ACTATTTACgattcccttgagaacggaccgagtccgaaacatatcgggaa
aaatcaaaatataatttttcgtCATCTATAAAAAGTAAGATCAGTCACAA
TATTTTAGCAAAACATTCTGTTATTGATATTTCAGGCCGAAGCAAACATC
GTTGACATCATCTCAGAATATGAACAATATACGCATGCGCCTGTTGATGA
TGATATCCCGTCCGAATATTGTGAGCTTGAAGATTCACTAGAGGAGTTGG
ATTCAGGTTTTGGTGGGTTATGACACTGTTGAGATGACACGTGTATAGTT
GAGGAGACAGCTCGAAGAATGGCTTTTTATCGTTGGTCAAATCCATTTGG
TAGAAGACCCCGCAACGATAAGATAGCTTTACACTGATAAGCCCACTATC
GTGATCAACGTGATGAAAAAGTCGGTGAAATTAGTTTAAAAAAGACAATG
TTCCATCTATGAATAACAATCTATTCGATGAAAACAACCCCTCTACTGAA
AGGATGTGCCAACGAACAATATGAAACAGCGTGGGGTGTTTCATATTATT
AAAAACGTTACCTTCCATGACAGCATTACAGAACATATGTACTGGGCATT
AACCAAAGTCATTAAAAATAAGACATGATGAATTTATTCCGTACGTTGAC
ATATTGAAGACCCTTGTTTACATATTAAATTGAGACTTGTGGAATTAAAG
CACTCATCTGAAAACATGCATTGTCTATAAAGAGAAgtttaatataa

Coding sequence (CDS) from alignment at scaffold_114:4217..13313+

>TCONS_00046579 ID=TCONS_00046579|Name=TCONS_00046579|organism=Clytia hemisphaerica|type=CDS|length=7035bp|location=Sequence derived from alignment at scaffold_114:4217..13313+ (Clytia hemisphaerica)
ATGAGGGAAATAGTCAGCGTACAGATAGGACAATGTGGAAATCAGATTGG
TGAAAAATTTTGGGAGACGATATGTCTTGACCATCAAATTCCACTGGATG
GAAAGATCAGCCAACAAGCACTTTCTGACCCCCGTGAAGATATCCTGAAA
CCTCGTGGGAAGTATGAAGTTTACTTTAAAGAGATTGGCACATATGGGGG
TAGTGAAGTGCAGTTTGTACCACGGAGTGTTTTGGTGGATATGGAACCAG
GCGTTTTAGATTCGATTCGTGGTGGGAAATTGAGAGATCTGTTCAAGCCT
GACCACATGTTAAACGGACAAGATGGTTCATGCAACAACTGGGCCAAAGG
TTACCTTCACCAAGGTGGAGAGTATATCGAACAAACAATGGAGATCATTC
GAAGGGAGTGCGAGTCATGTGACTGCATCCAAGCTTTCCAATTGGCTCAT
TCCGTTGGTGGAGGAACTGGGTCGGGATTCGGTTCCTTGTTACTATGTCG
TCTCTATGACGAGTTTCCCGACATTTTGCTCATGAATGCCAGCGTTTTGC
CGTCGACTCAAGTTTCCGACGTCGTTGTTGAGCCATACAATACAATCCTT
AGTCTGGCATATCTGGTGGATTATAGCAATGGTGTGTTTTGTATAGATAA
TGAAGCGTTGTATAAAATCTGTATGAATAAACTAAAAGTTGAAAGGATTA
ATTATGGCACGATTAATGAGCTGATTGCTTCAACTCTCGGTGGTGCAACC
ACCAGTCTGCGCTACCCTGGCCAGcTGAATTCGGACGTCCGAAAATTATC
AGTCAACATGGTTCCCTTCCCACGTCTGCATTTCTATATGACTGGATTAT
CCCCATTAGTTCATGATTATGTGAAACCATACCTCAAGAATGATATTGCG
GAGGTAACAAGAGACTTATTTGAACCTTCAAACATGTTGTGTGATTGCGA
TCCGAGGTCTGGGCGCTACTTAACATTTGCCGCCATTTACCGTGGTCAAA
CGAACACTAGAGAAATCGAAGAAACTattatgaattttcaaaataagaac
agttcATCTTTTGTGGAATGGATCCCACACAATGCGAAAGTTGCGACTTG
TGATGTCCCATTGAAAGGACAAAGATTGAAAGCAACTTTCATTGCTAATA
ATACCTCAATACAAAACATTTTACGACGTTCGAGAGACCGTTATTTCAAG
ATGATGAGACGTAAAGCCTTTCTCCATTGGTACACAGCACAAGGAATGGA
AGAGCTACAATTCATGGAGGCCGAAGCAAACATCGTTGACATCATCTCAG
AATATGAACAATATACGCATGCGCCTGTTGATGATGATATCCCGTCCGAA
TATTGTGAGCTTGAAGATTCACTAGAGGAGTTGGATTCAGGTTTTGGTGG
GTTATGAATGAGGGAAATAGTCAGCGTACAGATAGGACAATGTGGAAATC
AGATTGGTGAAAAATTTTGGGAGACGATATGTCTTGACCATCAAATTCCA
CTGGATGGAAAGATCAGCCAACAAGCACTTTCTGACCCCCGTGAAGATAT
CCTGAAACCTCGTGGGAAGTATGAAGTTTACTTTAAAGAGATTGGCACAT
ATGGGGGTAGTGAAGTGCAGTTTGTACCACGGAGTGTTTTGGTGGATATG
GAACCAGGCGTTTTAGATTCGATTCGTGGTGGGAAATTGAGAGATCTGTT
CAAGCCTGACCACATGTTAAACGGACAAGATGGTTCATGCAACAACTGGG
CCAAAGGTTACCTTCACCAAGGTGGAGAGTATATCGAACAAACAATGGAG
ATCATTCGAAGGGAGTGCGAGTCATGTGACTGCATCCAAGCTTTCCAATT
GGCTCATTCCGTTGGTGGAGGAACTGGGTCGGGATTCGGTTCCTTGTTAC
TATGTCGTCTCTATGACGAGTTTCCCGACATTTTGCTCATGAATGCCAGC
GTTTTGCCGTCGACTCAAGTTTCCGACGTCGTTGTTGAGCCATACAATAC
AATCCTTAGTCTGGCATATCTGGTGGATTATAGCAATGGTGTGTTTTGTA
TAGATAATGAAGCGTTGTATAAAATCTGTATGAATAAACTAAAAGTTGAA
AGGATTAATTATGGCACGATTAATGAGCTGATTGCTTCAACTCTCGGTGG
TGCAACCACCAGTCTGCGCTACCCTGGCCAGcTGAATTCGGACGTCCGAA
AATTATCAGTCAACATGGTTCCCTTCCCACGTCTGCATTTCTATATGACT
GGATTATCCCCATTAGTTCATGATTATGTGAAACCATACCTCAAGAATGA
TATTGCGGAGGTAACAAGAGACTTATTTGAACCTTCAAACATGTTGTGTG
ATTGCGATCCGAGGTCTGGGCGCTACTTAACATTTGCCGCCATTTACCGT
GGTCAAACGAACACTAGAGAAATCGAAGAAACTattatgaattttcaaaa
taagaacagttcATCTTTTGTGGAATGGATCCCACACAATGCGAAAGTTG
CGACTTGTGATGTCCCATTGAAAGGACAAAGATTGAAAGCAACTTTCATT
GCTAATAATACCTCAATACAAAACATTTTACGACGTTCGAGAGACCGTTA
TTTCAAGATGATGAGACGTAAAGCCTTTCTCCATTGGTACACAGCACAAG
GAATGGAAGAGCTACAATTCATGGAGGCCGAAGCAAACATCGTTGACATC
ATCTCAGAATATGAACAATATACGCATGCGCCTGTTGATGATGATATCCC
GTCCGAATATTGTGAGCTTGAAGATTCACTAGAGGAGTTGGATTCAGGTT
TTGGTGGGTTATGAATGAGGGAAATAGTCAGCGTACAGATAGGACAATGT
GGAAATCAGATTGGTGAAAAATTTTGGGAGACGATATGTCTTGACCATCA
AATTCCACTGGATGGAAAGATCAGCCAACAAGCACTTTCTGACCCCCGTG
AAGATATCCTGAAACCTCGTGGGAAGTATGAAGTTTACTTTAAAGAGATT
GGCACATATGGGGGTAGTGAAGTGCAGTTTGTACCACGGAGTGTTTTGGT
GGATATGGAACCAGGCGTTTTAGATTCGATTCGTGGTGGGAAATTGAGAG
ATCTGTTCAAGCCTGACCACATGTTAAACGGACAAGATGGTTCATGCAAC
AACTGGGCCAAAGGTTACCTTCACCAAGGTGGAGAGTATATCGAACAAAC
AATGGAGATCATTCGAAGGGAGTGCGAGTCATGTGACTGCATCCAAGCTT
TCCAATTGGCTCATTCCGTTGGTGGAGGAACTGGGTCGGGATTCGGTTCC
TTGTTACTATGTCGTCTCTATGACGAGTTTCCCGACATTTTGCTCATGAA
TGCCAGCGTTTTGCCGTCGACTCAAGTTTCCGACGTCGTTGTTGAGCCAT
ACAATACAATCCTTAGTCTGGCATATCTGGTGGATTATAGCAATGGTGTG
TTTTGTATAGATAATGAAGCGTTGTATAAAATCTGTATGAATAAACTAAA
AGTTGAAAGGATTAATTATGGCACGATTAATGAGCTGATTGCTTCAACTC
TCGGTGGTGCAACCACCAGTCTGCGCTACCCTGGCCAGcTGAATTCGGAC
GTCCGAAAATTATCAGTCAACATGGTTCCCTTCCCACGTCTGCATTTCTA
TATGACTGGATTATCCCCATTAGTTCATGATTATGTGAAACCATACCTCA
AGAATGATATTGCGGAGGTAACAAGAGACTTATTTGAACCTTCAAACATG
TTGTGTGATTGCGATCCGAGGTCTGGGCGCTACTTAACATTTGCCGCCAT
TTACCGTGGTCAAACGAACACTAGAGAAATCGAAGAAACTattatgaatt
ttcaaaataagaacagttcATCTTTTGTGGAATGGATCCCACACAATGCG
AAAGTTGCGACTTGTGATGTCCCATTGAAAGGACAAAGATTGAAAGCAAC
TTTCATTGCTAATAATACCTCAATACAAAACATTTTACGACGTTCGAGAG
ACCGTTATTTCAAGATGATGAGACGTAAAGCCTTTCTCCATTGGTACACA
GCACAAGGAATGGAAGAGCTACAATTCATGGAGGCCGAAGCAAACATCGT
TGACATCATCTCAGAATATGAACAATATACGCATGCGCCTGTTGATGATG
ATATCCCGTCCGAATATTGTGAGCTTGAAGATTCACTAGAGGAGTTGGAT
TCAGGTTTTGGTGGGTTATGAATGAGGGAAATAGTCAGCGTACAGATAGG
ACAATGTGGAAATCAGATTGGTGAAAAATTTTGGGAGACGATATGTCTTG
ACCATCAAATTCCACTGGATGGAAAGATCAGCCAACAAGCACTTTCTGAC
CCCCGTGAAGATATCCTGAAACCTCGTGGGAAGTATGAAGTTTACTTTAA
AGAGATTGGCACATATGGGGGTAGTGAAGTGCAGTTTGTACCACGGAGTG
TTTTGGTGGATATGGAACCAGGCGTTTTAGATTCGATTCGTGGTGGGAAA
TTGAGAGATCTGTTCAAGCCTGACCACATGTTAAACGGACAAGATGGTTC
ATGCAACAACTGGGCCAAAGGTTACCTTCACCAAGGTGGAGAGTATATCG
AACAAACAATGGAGATCATTCGAAGGGAGTGCGAGTCATGTGACTGCATC
CAAGCTTTCCAATTGGCTCATTCCGTTGGTGGAGGAACTGGGTCGGGATT
CGGTTCCTTGTTACTATGTCGTCTCTATGACGAGTTTCCCGACATTTTGC
TCATGAATGCCAGCGTTTTGCCGTCGACTCAAGTTTCCGACGTCGTTGTT
GAGCCATACAATACAATCCTTAGTCTGGCATATCTGGTGGATTATAGCAA
TGGTGTGTTTTGTATAGATAATGAAGCGTTGTATAAAATCTGTATGAATA
AACTAAAAGTTGAAAGGATTAATTATGGCACGATTAATGAGCTGATTGCT
TCAACTCTCGGTGGTGCAACCACCAGTCTGCGCTACCCTGGCCAGcTGAA
TTCGGACGTCCGAAAATTATCAGTCAACATGGTTCCCTTCCCACGTCTGC
ATTTCTATATGACTGGATTATCCCCATTAGTTCATGATTATGTGAAACCA
TACCTCAAGAATGATATTGCGGAGGTAACAAGAGACTTATTTGAACCTTC
AAACATGTTGTGTGATTGCGATCCGAGGTCTGGGCGCTACTTAACATTTG
CCGCCATTTACCGTGGTCAAACGAACACTAGAGAAATCGAAGAAACTatt
atgaattttcaaaataagaacagttcATCTTTTGTGGAATGGATCCCACA
CAATGCGAAAGTTGCGACTTGTGATGTCCCATTGAAAGGACAAAGATTGA
AAGCAACTTTCATTGCTAATAATACCTCAATACAAAACATTTTACGACGT
TCGAGAGACCGTTATTTCAAGATGATGAGACGTAAAGCCTTTCTCCATTG
GTACACAGCACAAGGAATGGAAGAGCTACAATTCATGGAGGCCGAAGCAA
ACATCGTTGACATCATCTCAGAATATGAACAATATACGCATGCGCCTGTT
GATGATGATATCCCGTCCGAATATTGTGAGCTTGAAGATTCACTAGAGGA
GTTGGATTCAGGTTTTGGTGGGTTATGAATGAGGGAAATAGTCAGCGTAC
AGATAGGACAATGTGGAAATCAGATTGGTGAAAAATTTTGGGAGACGATA
TGTCTTGACCATCAAATTCCACTGGATGGAAAGATCAGCCAACAAGCACT
TTCTGACCCCCGTGAAGATATCCTGAAACCTCGTGGGAAGTATGAAGTTT
ACTTTAAAGAGATTGGCACATATGGGGGTAGTGAAGTGCAGTTTGTACCA
CGGAGTGTTTTGGTGGATATGGAACCAGGCGTTTTAGATTCGATTCGTGG
TGGGAAATTGAGAGATCTGTTCAAGCCTGACCACATGTTAAACGGACAAG
ATGGTTCATGCAACAACTGGGCCAAAGGTTACCTTCACCAAGGTGGAGAG
TATATCGAACAAACAATGGAGATCATTCGAAGGGAGTGCGAGTCATGTGA
CTGCATCCAAGCTTTCCAATTGGCTCATTCCGTTGGTGGAGGAACTGGGT
CGGGATTCGGTTCCTTGTTACTATGTCGTCTCTATGACGAGTTTCCCGAC
ATTTTGCTCATGAATGCCAGCGTTTTGCCGTCGACTCAAGTTTCCGACGT
CGTTGTTGAGCCATACAATACAATCCTTAGTCTGGCATATCTGGTGGATT
ATAGCAATGGTGTGTTTTGTATAGATAATGAAGCGTTGTATAAAATCTGT
ATGAATAAACTAAAAGTTGAAAGGATTAATTATGGCACGATTAATGAGCT
GATTGCTTCAACTCTCGGTGGTGCAACCACCAGTCTGCGCTACCCTGGCC
AGcTGAATTCGGACGTCCGAAAATTATCAGTCAACATGGTTCCCTTCCCA
CGTCTGCATTTCTATATGACTGGATTATCCCCATTAGTTCATGATTATGT
GAAACCATACCTCAAGAATGATATTGCGGAGGTAACAAGAGACTTATTTG
AACCTTCAAACATGTTGTGTGATTGCGATCCGAGGTCTGGGCGCTACTTA
ACATTTGCCGCCATTTACCGTGGTCAAACGAACACTAGAGAAATCGAAGA
AACTattatgaattttcaaaataagaacagttcATCTTTTGTGGAATGGA
TCCCACACAATGCGAAAGTTGCGACTTGTGATGTCCCATTGAAAGGACAA
AGATTGAAAGCAACTTTCATTGCTAATAATACCTCAATACAAAACATTTT
ACGACGTTCGAGAGACCGTTATTTCAAGATGATGAGACGTAAAGCCTTTC
TCCATTGGTACACAGCACAAGGAATGGAAGAGCTACAATTCATGGAGGCC
GAAGCAAACATCGTTGACATCATCTCAGAATATGAACAATATACGCATGC
GCCTGTTGATGATGATATCCCGTCCGAATATTGTGAGCTTGAAGATTCAC
TAGAGGAGTTGGATTCAGGTTTTGGTGGGTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029728XLOC_029728Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046579-exon-scaffold_114-1491911889:4217..4540TCONS_00046579-exon-scaffold_114-1491911889:4217..4540Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:4217..4540TCONS_00046579-exon-scaffold_114-1510915933:4217..4540Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:4217..4540TCONS_00046579-exon-scaffold_114-1575043694:4217..4540Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:6205..6325TCONS_00046579-exon-scaffold_114-1491911889:6205..6325Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:6205..6325TCONS_00046579-exon-scaffold_114-1510915933:6205..6325Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:6205..6325TCONS_00046579-exon-scaffold_114-1575043694:6205..6325Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:7064..7182TCONS_00046579-exon-scaffold_114-1491911889:7064..7182Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:7064..7182TCONS_00046579-exon-scaffold_114-1510915933:7064..7182Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:7064..7182TCONS_00046579-exon-scaffold_114-1575043694:7064..7182Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:7425..7624TCONS_00046579-exon-scaffold_114-1491911889:7425..7624Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:7425..7624TCONS_00046579-exon-scaffold_114-1510915933:7425..7624Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:7425..7624TCONS_00046579-exon-scaffold_114-1575043694:7425..7624Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:8105..8227TCONS_00046579-exon-scaffold_114-1491911889:8105..8227Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:8105..8227TCONS_00046579-exon-scaffold_114-1510915933:8105..8227Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:8105..8227TCONS_00046579-exon-scaffold_114-1575043694:8105..8227Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:8424..8667TCONS_00046579-exon-scaffold_114-1491911889:8424..8667Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:8424..8667TCONS_00046579-exon-scaffold_114-1510915933:8424..8667Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:8424..8667TCONS_00046579-exon-scaffold_114-1575043694:8424..8667Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:8843..9933TCONS_00046579-exon-scaffold_114-1491911889:8843..9933Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:8843..9933TCONS_00046579-exon-scaffold_114-1510915933:8843..9933Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:8843..9933TCONS_00046579-exon-scaffold_114-1575043694:8843..9933Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:10530..10788TCONS_00046579-exon-scaffold_114-1491911889:10530..10788Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:10530..10788TCONS_00046579-exon-scaffold_114-1510915933:10530..10788Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:10530..10788TCONS_00046579-exon-scaffold_114-1575043694:10530..10788Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:11210..11667TCONS_00046579-exon-scaffold_114-1491911889:11210..11667Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:11210..11667TCONS_00046579-exon-scaffold_114-1510915933:11210..11667Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:11210..11667TCONS_00046579-exon-scaffold_114-1575043694:11210..11667Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:12041..12535TCONS_00046579-exon-scaffold_114-1491911889:12041..12535Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:12041..12535TCONS_00046579-exon-scaffold_114-1510915933:12041..12535Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:12041..12535TCONS_00046579-exon-scaffold_114-1575043694:12041..12535Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1491911889:12702..13313TCONS_00046579-exon-scaffold_114-1491911889:12702..13313Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1510915933:12702..13313TCONS_00046579-exon-scaffold_114-1510915933:12702..13313Clytia hemisphaericaexon
TCONS_00046579-exon-scaffold_114-1575043694:12702..13313TCONS_00046579-exon-scaffold_114-1575043694:12702..13313Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046579-proteinTCONS_00046579-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_114supercontigscaffold_114:4217..13313 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
151.73	158.375	134.203	124.055	67.258	53.3157	69.6249	72.9389	192.242	159.003	178.079	194.954	205.598	229.481	348.773	441.494	224.211	201.21	297.198	327.576	165.448	165.978	248.765	287.01	185.143	166.955	210.347	330.204	715.148	575.704
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002453Beta_tubulin
IPR000217Tubulin
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR003008Tubulin_FtsZ_GTPase
IPR013838Beta-tubulin_BS
IPR017975Tubulin_CS
IPR008280Tub_FtsZ_C
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Molecular Function
TermDefinition
GO:0005200structural constituent of cytoskeleton
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0005874 microtubule
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005200 structural constituent of cytoskeleton
Blast
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BLAST of TCONS_00046579 vs. Swiss-Prot (Human)
Match: TBB6 (Tubulin beta-6 chain OS=Homo sapiens GN=TUBB6 PE=1 SV=1)

HSP 1 Score: 464.151 bits (1193), Expect = 1.674e-149
Identity = 222/446 (49.78%), Postives = 313/446 (70.18%), Query Frame = 3 
Query: 2166 MREIVSVQIGQCGNQIGEKFWETICLDHQI-PLDGKISQQALSDPREDILKPRGKYEVYFKEIGTYGGSEVQFVPRSVLVDMEPGVLDSIRGGKLRDLFKPDHMLNGQDGSCNNWAKGYLHQGGEYIEQTMEIIRRECESCDCIQAFQLAHXXXXXXXXXXXXXXXCRLYDEFPDILLMNASVLPSTQVSDVVVEPYNTILSLAYLVDYSNGVFCIDNEALYKICMNKLKVERINYGTINELIASTLGGATTSLRYPGQLNSDVRKLSVNMVPFPRLHFYMTGLSPLVHDYVKPYLKNDIAEVTRDLFEPSNMLCDCDPRSGRYLTFAAIYRGQTNTREIEETIMNFQNKNSSSFVEWIPHNAKVATCDVPLKGQRLKATFIANNTSIQNILRRSRDRYFKMMRRKAFLHWYTAQGMEELQFMEAEANIVDIISEYEQYTHAPVDD 3500
            MREIV +Q GQCGNQIG KFWE I  +H I P  G +   AL   R           VY+ E      S  ++VPR+ LVD+EPG +DS+R G    LF+PD+ + GQ G+ NNWAKG+  +G E ++  ++++R+ECE CDC+Q FQL HS+GGGTGSG G+LL+ ++ +EFPD ++   SV+PS +VSD VVEPYN  LS+  LV+ ++  +CIDNEALY IC   LK+    YG +N L+++T+ G TTSLR+PGQLN+D+RKL+VNMVPFPRLHF+M G +PL     + Y    + E+T+ +F+  NM+  CDPR GRYLT A ++RG  + +E++E ++  Q+KNSS FVEWIP+N KVA CD+P +G ++ +TFI N+T+IQ + +R  +++  M RRKAFLHW+T +GM+E++F EAE+N+ D++SEY+QY  A  +D
Sbjct:    1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLER---------INVYYNE-----SSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAND 432
The following BLAST results are available for this feature:
BLAST of TCONS_00046579 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBB61.674e-14949.78Tubulin beta-6 chain OS=Homo sapiens GN=TUBB6 PE=1... [more]
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