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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046596 ID=TCONS_00046596|Name=TCONS_00046596|organism=Clytia hemisphaerica|type=transcript|length=1087bp
aactttcccAAAAATCCTTAAGTCCTGCTCTTgggtttttcaaaaatttt
attagcAGGGGATGCTTATTAGGtacgcgttttttttttttTAAGAAACT
Agttttaccaagcagcctcaatgtttcttaagaaatcagccttttgagcc
ttaaatgtttcttacatgtttctaaactttttgacataatcagcctattt
ttccatgttttgatttgaaggttcttaaaaaaacgaattaaaaatgtcat
tttttcattttcagccttagcatgtttcttagatgtttcttagtttttag
gcattctgagcctcatgtttcttaaaagtgtgtttcttaaaaaaaacaaa
cgtgtacCTGATAGTATACAGAGGAGCCAGTTTACATTACTGGCTAACAT
TGTGGTTATGTTGGTAGTCTACAGGAATTTTTAATTCGATTTTGGGCCAC
ACAGGGACAAATTGCTTACGTACGTGCTTAAAGATTCAATTTGTAGAGAC
ATTTACATATGCAGTTATATGGAGATAAAACTTTAATCAATCAATTATCT
ACTCTTTAATAAGAAACCATTGTTAGGACTATATCAAGATTTTCTTTCTT
GATGCAGGGTTGAATATTATTTGCAATCAGTTTGACCTTGTAAAATGATG
TTTTAAATGACAGATGCATATTTCTCAATATTGTAATTGTCATGTTAAAT
TACAAGTGCAAATATTTTaacataaacaaagaaaaaatgctTTCTGTTTG
AATGGTTATAAGTATCATGTTTCAGTTTCTAAAGACAACAATTCATGTGT
CACAGCAATAGATATTACATTAGTGCATTGATTTAAAATGTTGCAATATT
ATCAAACCACGTGGGGAGCATGAGCATTACTAGGACTAGATTTCTAATGA
AAGTGCATAACCCAACAAAAAAATCTATATGTATGTGAAAAAACAatcta
aagtttttgaaaattagcaTTTCCCCATAACCCCAACTTAAAACATTTTG
TCTAATTGATGTGAAAGCATCTTAAAAGGGAGCTAATTTTTGCTGGAACT
AGTTTTTgacagtgaaaataaaaaaaatgcaaataaT Run BLAST on NCBI transcript from alignment at scaffold_114:4954..6040 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046596 ID=TCONS_00046596|Name=TCONS_00046596|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at scaffold_114:4954..6040 (Clytia hemisphaerica)
AttatttgcattttttttattttcactgtcAAAAACTAGTTCCAGCAAAA
ATTAGCTCCCTTTTAAGATGCTTTCACATCAATTAGACAAAATGTTTTAA
GTTGGGGTTATGGGGAAAtgctaattttcaaaaactttagatTGTTTTTT
CACATACATATAGATTTTTTTGTTGGGTTATGCACTTTCATTAGAAATCT
AGTCCTAGTAATGCTCATGCTCCCCACGTGGTTTGATAATATTGCAACAT
TTTAAATCAATGCACTAATGTAATATCTATTGCTGTGACACATGAATTGT
TGTCTTTAGAAACTGAAACATGATACTTATAACCATTCAAACAGAAagca
ttttttctttgtttatgttAAAATATTTGCACTTGTAATTTAACATGACA
ATTACAATATTGAGAAATATGCATCTGTCATTTAAAACATCATTTTACAA
GGTCAAACTGATTGCAAATAATATTCAACCCTGCATCAAGAAAGAAAATC
TTGATATAGTCCTAACAATGGTTTCTTATTAAAGAGTAGATAATTGATTG
ATTAAAGTTTTATCTCCATATAACTGCATATGTAAATGTCTCTACAAATT
GAATCTTTAAGCACGTACGTAAGCAATTTGTCCCTGTGTGGCCCAAAATC
GAATTAAAAATTCCTGTAGACTACCAACATAACCACAATGTTAGCCAGTA
ATGTAAACTGGCTCCTCTGTATACTATCAGgtacacgtttgtttttttta
agaaacacacttttaagaaacatgaggctcagaatgcctaaaaactaaga
aacatctaagaaacatgctaaggctgaaaatgaaaaaatgacatttttaa
ttcgtttttttaagaaccttcaaatcaaaacatggaaaaataggctgatt
atgtcaaaaagtttagaaacatgtaagaaacatttaaggctcaaaaggct
gatttcttaagaaacattgaggctgcttggtaaaacTAGTTTCTTAaaaa
aaaaaaaacgcgtaCCTAATAAGCATCCCCTgctaataaaatttttgaaa
aacccAAGAGCAGGACTTAAGGATTTTTgggaaagtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046596-exon-scaffold_114-1491911889:4954..6040 | TCONS_00046596-exon-scaffold_114-1491911889:4954..6040 | Clytia hemisphaerica | exon |
| TCONS_00046596-exon-scaffold_114-1510915933:4954..6040 | TCONS_00046596-exon-scaffold_114-1510915933:4954..6040 | Clytia hemisphaerica | exon |
| TCONS_00046596-exon-scaffold_114-1575043694:4954..6040 | TCONS_00046596-exon-scaffold_114-1575043694:4954..6040 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_114 | supercontig | scaffold_114:4954..6040 . |
Blast
The following BLAST results are available for this feature:
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