TCONS_00046644 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046644
Unique NameTCONS_00046644
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5562

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046644 ID=TCONS_00046644|Name=TCONS_00046644|organism=Clytia hemisphaerica|type=transcript|length=5562bp
aaaaaaacaaaaacaaaattttttgatgaactgtccctgaagaaaaaata
aactgaaaaCACATGAGAGTTGATATTTGGGTCTTTCTACTGAAAAAAAA
GGGGAACTGAATTTCTTCTGTAGCCTTTCTCATAAATTTGCTCTACTAAA
CTGGGCTGGTCGTGGAAATTGGTAGAAACAATTTCATTATCACTAAACAA
CAAGCACCAGACGAATTTGAAGGGAGTGTCATAAGCGATTATCAATCACC
TTTTATCCAACAGACAACTTCACCTGAAACTCAAAAGAAAAGGAAAGATC
GAGCGTCTAATCTAAAACGATCCTTCCTAAcaaaATCTTCACCAAACTTG
TTGAGTTTTGATGATAATTCATCAGTAGAAGGAAACGGAACACCTGACAA
AAATAACCGGTCACCCTCTCCGACACTGGAATACTCTAAAGATCcgtatt
tcttagaaaaacaGCTGAAAAAGAACGATGATAATAAAATCTCACAGGCT
ATATTAAGAGTACAGAATAGCATTAATATCAAGAGAGCAGCCTCACTAGA
CTGGTCAAGTCTTTATAAACCAGAACCTGTTTCAAATaatcaacaaaaat
taaaatcatctGTTTCGAAACCAAATTTATTAACAATGGCGGATGTGATC
TTCGAACCGATTGTAGATACAAACATCTCTGGTAATGCGGAAGATGAGCA
GATTGTAGAAATCAATGGAGCTTCGGATGTCGGACAGGAAGTATCCATGG
AAGAACCTGTTTTAACTAACGGACACACTGAACCTGAAATACTGGACACT
CCAGAAGAGAGTTCGACACCTGTCGAAGAAAATTCAACACCAGTAGTACA
GGACACAACAGATAAAACAGATACGACACCACAAGATACAGAACAAGTAA
TTGTTGAGGAAGTCGTTGTCGTGAAGAAAGAATCgtcaaaaagtaaaaca
aaagaCGAACCAACCAAAGGTGTCAAAGGAACCAAGAAAACCGCATCTAC
TGGTGGTGCAAAGAAAAGTACTTCCGTTACCAAGACGACCTCAAAGGTTT
CAAACAATGTATCCAAGACAACGGTCACACGGACATCAATCAGCAAAGTT
CCAACCGACAAATCTACGACTAAAACAACAAGACCTACCGCAACTAAAAC
ATCAACCACACGGCCCAAAACTGCACCCACATCAAGTACTCGACCAACAT
CCAGTACTCGACCAACATCCAAATCTCCTGTCAAGCCAGTCTCGACAGCT
CCTTTGAAAAAGAAACCAACATCTGCTGGAACCACAAGGCCATCAACAGC
GACGTCGAGACCCACAACTGTAGCCAGTAAAACGTCCTCATCAACAACCA
AAACCGCCAAGCCAACAGTCAGCAAAACGACTACACCCAAACCAACCCCA
AAAGCTCCAGGGGTGCCTCGACTTGGAAAACCTGGACAAAACATAGCGAA
AAAACCAGCAACAAAACCAGCTACTGGAGTTAGTCGCACAACAACGTCTG
CAACCTCTAAAACAGCAGCNCGCCTCGACTTGCTGATAGAGGAAAACCTG
GACAAAACATAGCGAAAAAACCAGCAACAAAACCAGCTACTGGAGTTAGT
CGCACAACAACGTCTGCAACCTCTAAAACGGCAGCAACAGCTACAAAAAC
ATCTTCCACGACCCGAAAACCAATCACAACCACAACTAAAACGACCACAA
CAACAaaaccaaaatcgacaattggAGCAACTAAACCTTCATCAAGCACA
ACAGTCAAAAAGACAGCAAAAACTGCTGACCCAACGAAATCGGTCACAAG
ACCTGCTTCAGCATCATCCCTCAAATCAACGCGACCCGCATCTAGCAAAC
CTACAACAGCAACTAAAGGTCGCACGACAACGTCACCTACAAAACCACTC
TctacaaaaacaacaaagactTCTACAACAAAAACTACAGTAGCCGACAA
ATCAAAAAAACCGGCATCCTCAGTTGCTAAGAAACCGACCGGTAAAGTTT
CTTCAGTTGGCGATAAAACGAAACCGAAGAAAAAGAAggaaggaaaagaa
gaaaaaccaaCGAAAACAGACAAAGAAGTTATCGTGGTTCCTGTTGCAGC
AGTAGAGGACAATCCACAAGATCTTGAAATCAACCTATCAGAGGCCGCAA
AACCAGCCGATGACATCATTGTCAGCCAATCAGAAGAAGTTGTTTTGGCT
ACAGAGGAAGTCAAAGAACCACAAACATCAGATTTGGTTGAAGTTGAGCC
TCCACAAGTAAACCAATCAGAACCCGAAGTTGCAGAGACTAGCCAATCAG
TGACCGATGTTGCAGAGACTAGCAAACCAGAGGCCGAAATTCCAcaaatc
aaccaatcagagCCCGAGATTTTACAACCCAGCCAATCAGAAGCGTTCAC
TTTGATCCAACATGAAGAAGTATGCGAAGAACAAAGCGATAATGAAGACA
AAGAAAACATTCCAAAAGTTCATTTCGAGCAACAAGAAATCTCCAACAGT
CAACCAACGCCGTATGACTATCATGCGACGTATAGTCAAGATTCAGACCA
CGATTTATATTGTGTCACGCCGTTAGTGAGCGGGCAATATGATAGCGAGA
CACCCAACTCTGAATTCTCACCTAACCAATCACCAAGTAAAGGACAATAC
AATGAGAACTCGTTTGCAACGGTCGAAGAAGAAGAGAGAATGGAAGAATC
ACCTGAAATCTCTATCACAGGGGCTTCAAGTTCGCCAAATGAAATCTTTG
AAGAAGACCCTGGACGTGTGGGAAGGTTAGATTTCAATCAAGAATTCGAC
GTCACGTCACCCGAGAAAGAAGTCGTCACACCGAACATCGAAACAGAAAC
AATAATTTCACCGAGCGATGAACCGGAAACGGTCGTATCACCGACAACCG
AAACAGACGATCTTGTCTCTCCATCATCAAGACAAGAAGTAGAAGATATT
GCTCCTCCAGCAGTAGAAACACCTGAATCTTTTTCACCAAACGAAGAGCG
ACAGGACATCATTTCTTCTGCTTTTGATCATGAGGTAGAGGCGTCACCGG
AAATCATTTCCCCGACTCCAGAAATTAGTTCACCAGCTCCAGAAGAGATT
CTTTCACCAGTAAATGATAGCCAAGATGAAGTGTCCCCATCTCTGGAAGA
TGAAGAGATCATTGAACAAGTAACCGACTCACAACTACAACAGGAACCAG
AAATCACTTCCCCAATAGTAGATGAAAGAGACGTCGTTTCTCCAGCTGAA
GAACGACAAGACGTTGTTTCACCGACGGAAGAAcgacacgacgttgtttc
accAACGGAAGAAcgacacgacgttgtttcaccAACGGAAGAAcgacacg
acgttgtttcaccAACGGAAGAACGACACGACGTTTTTTCACCGACGGAA
GAAATTCAGGAAAAGTCATCTCCAGTTGAAGAAGCAGAGCCCACCATGTC
ACCATCAGAAGAACAAGCAGAAATCGTTTCCCAAAGTGAAGATGCTGGAG
ACGTAGTACCTCAATCTGTTGACCATCAAGAACCAATCTCACCTGTAACT
GAGGATTCACATCAACTTGTTTCCTCAACCTCGGAACAACCAAAAGAATC
CTTTTCAGCTGAAGAGCCACAAGAGCTTGTGTCACCAACAGTGGAATCAA
AAGAAATCGTTTCACCAAGTGAAGAGCCAGCATCTTTCGCCGAACCATCT
ACAGAGGAAGCAACCGAAGATTTCTTATCATCAGCTATTGAAGAATCAGA
CCAGCAGATATCAACTGAAGTTCAAGAATCTCAAGAGATAGCACAACCAG
AGGTTGAAGTAAGAGCCGAAATTGGTTCTCCAGATCAAGGAATTGTATCT
CCATCACACGACGAAATTCTTTCCACCAATGACCAATCAGAGATTTTCAC
TTCATCTGCCAGTGCACACATTGAAATAAACGAAGAACGACAAGATGTAA
TTTCACCGAATGAACAACCCTACCAAAGCCGAGAACTGATTTCACCGACT
ACAGACGAGAGCCGAGAACTTCTCTCGCCGACTACTGACGATGAACGACA
AGGCACCGAATCACCGATGGAAGGAAGTATCGAATTCGAATCCCAAATCA
TTGAATCTGTACAAATCACAGAGAAACAAGAAGTTATGTCGGCGACCGAA
CAACGAGGAGTAATCATCCCATCGGGTCTCTCCCGAGAAGAGCTCGCCTC
CCCGACTGCTAACTACGAAGACCCAGATATCACCTCACCATCTAAAGAAC
AAAGACATAGACTAATTTCTCCAACTGATGACCAACCGCAAGAAAATGCT
TCCCCATCAGATCAATCAGGAGAAGAAACTTCCTCACCAACTCCAGGAca
aggaaaaaactttttttacacagAAGAAAGACAGCAAGAAAGTGTCTCTC
CAAATGACGAAACCACTTCATCTGTCCAAAACGACGAGCAAGATCGCCAA
GAGACTTTCCAACAAGAACATCAAACCGATGTCACTTACACACAAGAAAC
ACAATCATTCGAAATCCATTCTTTCGAAAAtaataatgatgacgtcatca
attcaATGGAAACCAACTACACCGCTGAAGTCCAGTCCATCGCCATCGAA
ACAAGTCATAGCCAGGAAACTCATATCATTGAAACCGTTGAAACAAAAGA
TAGCATAGAAACCCAGTCTGTCGAGATCAAACAAGCATGGGCTGACCAAG
AATCTACCGTAGATGCTTCTTACGTCATTGACGCCCGATCAGACGGCAAA
ATCCAAATCGGGGAATATTCATCTGCATTTTCCGAATCGGATTCAAGCGA
ACAAGAATCACCAAATCATCATGTTATGATCTCTAAAGCAACACATCAAA
ATGGATTCGCAAATACCGAAGAATTGGACCCGTTAGCACCGATGACCCAG
GAACTGGACCCCTTAACGACACCACCTCAACCGACCCATTGTTTTCAAGA
GGAACACGGACAATTTAATGCGCAAGGTGATGAAAATCAGAATGCGTATT
TTTGAAGGATATGATGAATGGAAGGATGGAGATTTTTTAGAATGAATTCa
ttaagaaaatagaaaagaacaGGTCGTCTAATCTAGCCTGGATAGTCCTT
GCAGACGGAGCTAAAATTATGGGTGAATGGCACCTGaggaaaaaaactaa
attgGATTGACAATCATAAGTGCTAAATGGACttctttaatttgaaaata
gatccataaatgattttcttttctcttACTATTTTAATgacagaaaaata
gaaaaacacttttttttaagtttttagtAGAAATTTGAAGGGAGAACTAA
GGTATTTCGGAGGCAAAATATTTCTCAAGTAAATGCCTCGATTGATTGAA
TTTACAAGCTTTCTGATTTTAGTCTagagttcttataaataaaagatGCA
CCAGATATGGGTAGCCTCGGAATGAAACACACTTTTCAGAATAAAATGAC
TTTTGAAACTgaggaaaaactgtttttgttaataggataaaaatatttat
ttgtatAAAATCtattgttaattttattttgcaaagaaaaaaacttttga
aatggaAGAAGA
Run BLAST on NCBI

transcript from alignment at scaffold_116:328695..350525+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046644 ID=TCONS_00046644|Name=TCONS_00046644|organism=Clytia hemisphaerica|type=transcript|length=21831bp|location=Sequence derived from alignment at scaffold_116:328695..350525+ (Clytia hemisphaerica)
aaaaaaacaaaaacaaaattttttgatgaactgtccctgaagaaaaaata
aactgaaaaCACATGAGAGTTGATATTTGGGTCTTTCTACTGAAAAAAAA
GGGGAACTGAATTTCTTCTGTAGCCTTTCTCATAAATTTGCTCTACTAAA
CTGGGCTGGTCGTGGAAATTGGTAGAAACAATTTCATTATCACTAAACAA
CAAGGTTAGTAACTATTTGAAGATAAATTAATGGAATATGCATTGGGCGG
AGAATTTGAATAGACGGGTGACGCCCAGTGCTATCATTTTTCCacaagta
attttttattggttGGATGTTGACTGTTGGGAGAATTTCATGGAGAACGA
CTCCACCCCTGCTTCATTACAATTTTTGGTTTAATAGGGTAACACTTTAT
TGTTTGTATGTTCGAGAAAGTGTAACTTTTCTATCGATAACAccatagtc
tgaatcgcagacctctatagatatacttcctatatagaaactttggttag
aggatgagcagaaggcTAATAAGACCACTGTCTCACAGCTCCGGTGGAAC
TTCTCCCCACGGAGTTTGGAGAGTTGATTGTCAGAAGTTTGGTGATTACT
TGGAGAAATTTAGATTGTTCTTAAAAGGGGattaaaatttctatcgaaat
cctaatggggatataaattctattgtttccaggtcttattttatttggtt
tatttggtcgttaaccagtaataaatcgattttgttactttttctgaaga
acgcgtcatttctattatttcaaatgaccaattattaaaaaatcttataa
aaactccatctcatctagATTATTTTGTTCTTACAAAAGTTCTTATAATG
AATACGTATTTTACAGAGATctaagaaaacattttcttgttaACAGCAGT
ACAgagattttaagaaataaactTTGTAAACTTTCGAGTTTACACTAAAG
TTGTTTATAGAATTTAATACTGGGAGCTTGGGTTTGACTCTCCGAAGAGA
GTCAATGTAAACTATACTGAGTTATCTCTACTAAGCGTATCTATGCTGTT
CCCGAGATCTCGAGTTAGACTCGAAACAGTCTGTGATGGTTCGTTGTGTG
ATCCTTAGGTTCAGTAACTCATGCATTTTGAAGGGCGGGTTTATTTTCTT
TACGCCTCCCTAAATGCTCCCTATCTTGTAAGCGGACATCCTAACTGACC
CTACGAGGGGGAGGAGGGTGTGAAAGGTCGGCTTTAAAAATTAGTTGGGT
AAAAATTTCGTAACTTTGTTAATAATTCTGTCACAATGATGCCGTGATTA
TACGGAGTAAGCCCTCGTCGGGATTAAATCGGATTATTACCGGGGAAATA
TCGGTCAATTATCCCCAAATTAAGGATTTTGATATTCAATTTACTTCTTT
AATTTGAGCTCATCGAAAAAAATTCTGAATGAATTTTTAGTAAGAAAAGA
TCCGGGAGTGTATATTTAAGCATCAATTCACATTTTCGAACaagaatttg
attggctttTAAATCACCGAATAAGGAAGATACCCCAGACACAAAGGGTC
CTTAAGAAAGGCACTCATAAGATTAGAGAAGGAAAATTTGGAGAGGGTTT
TTCAGACATACTTTGTTTAAGGACTTGGTTAATCTTATTTTACAGACAGA
AGAAATAAGGGGGTGAGAAAAGGGGATGATAAGAGCTTAAGATAGAAGAG
CGAAggcgaaagaaaatttgaagaaattcatCATCGATCCAAGGCTGTGA
TGTGTAGGAAAGGGTTCAAGATGTCGGCTAGAccaaaacaatgaaatttt
acaaaaaccaaTGCTTTAGTAGACTCTCGCTTATccgaacttctataatt
cgaacttatttcTAGACCCCGTCAAGAAGAAAACCTCTTAAAATACTtac
tataattcgaatctctctgtaattcgaacaaattactCCCCGActccccg
ttcgagttcgaattagtaAGAAACAGCTGTATCTGAATCTGTTTTTACCA
CCTGCCTTTTTTTCGATTTGTTTTCAATTACCCAAAAAATACGGATAAAA
ATTAAGTATCAAGAAATGATTTTTCCCAAAGAAGATTCAAAGACTAGGGG
CTATTCATTAAATGATGTGTTCCATATGATAAGCTTGGCCAAAGTCCAGA
GATGAGAATTCAATACACTATTCTCGAAATGCATGAAATAATTGCGAACC
TCGTTCTCAAAGACATATTGCTACGATAATTCAACGTCGTCAGACATAAA
TTGATGCGGTTttgaatcaaaattgaaaaaggttATTTTGGAAAACATAT
TGCATGTGTAAATGTcgtttgaaataattatttcatttgaaaacgaggcc
cgCATTGTGTTGATACATCTCGAGAAATTTGAGCGTAGAAACTATTGTTT
TCAAAGTAAATGAAAACGGTATTGTTCTTTTGAAGGCCATGACCCTTATC
ATGGAAACCCCGACGGTTTTCGGGTCATGGATTATGtgtaaaaccaaaat
atttctCTATTTTTACGCGCACGTCTTCACCGTGAAAATATATGatagtt
ttttcttttgttttgaaagttcttcCGCTTAAAGAGACGGAAAAGATCTG
GTCAGAGGAAAATTCgacattttcgaaaaagaaataaaatcgtACAATAG
GTGTAAGtgagttttagttttttttcatatttttacgaaAGTTAGAAAAT
GTATTTATATAACGTATGTTGTGAGATTCGAAAGGGGTTTGGAGATAAAA
TTCAGGAACAACCTCAATACCGACACGCTTAATGAAATTAATCGAACATC
GGTTTTTCGAAGTTCGACAAGGGAATTCTAGTCTAATTACGCTGATAGgg
tagaaaaattaattttagtttgGCTAAAGAATTTGTACTGTAGATCAACT
TAAGAAATGGAAAACATTATCggagtttttcgtcaaaatcagAAACTAAC
TAAATAACAGATTGTCTGGAGAATAGTctgaaatatatatttttcaattt
taaaacaaagtttgaaaaaatatttaaaatattaaGAGGATAGACTTCAA
AGCTAATATAACTGCAcaaactgaaaaatatatgaattAAATATTTCACC
CTAGGTGTGAAAAAACAGTCTGGAAaggaattaaaaaaatcactttataa
gaaaatgaaaaacataaaagattttgattGAGGCAACAAACATCCAAAGT
TAGAGAAATTGAGAATAGTTTTTCAACTTTAGTGGAAGTGACAAAagaaa
gtttcttataaaaaaatcacaaaagggATCATTTTAGAAGATTCAGACGA
CCATTTTGAGAATAGATGATTAAAATTTCATTGAGTCACAccttttttct
ccaaaaagacttcaaaattttgaaggcAGAACATTTCCAAATTTCCCTTC
TCCTTGTTGGGTACGTTTTTGTCTAGTTTTAGGAATTTTAAAAGGGAAAA
CAGCTCTCCACGTGCCTTTTTCTCTTTGAATCATGGTATAATTATGGTTT
GTATAACTTAATGGAATAAGAGAGGTTGAAGGCTGAACTTTaaattttac
aaagaaaatCTAGCATAAGTTGTTTTTTCGCTTTGTGGATAGCGAAACCA
ACACCGGGTTTACGATCAAATTCTGAGTTCGTTAGGCCAACCAAGGTGAC
TAGACTTTGGTTTCATTGGTCTTACATACTAAAATAAAAGTTtctcaaaa
caaatttcattAGTTTTAACCATTTCGGAGGCTGATCAAAAGCTTTGCAC
GACAAAATACATTTACTTTGAAATCCGCTGAGGGTTTCTTTCTAAAATCC
TACATTCAAAACAAACCgaaaggtttaaaaaaaattttccccttgTGATA
TAATATGTTATCTTTGAAGTTGGTTTCTTTAAAGTTTCACCAActtttta
tgataaaaaaagtaGGAATGTTTTGTCAAATTGTGGTTGCTAAAAACtcc
aagtttttatttttctgaaaaagtttaaaaaatttaatcgggttttcaaa
ttttaaaacaagCTTTCCACAAAATATTATGGGATCAAATTAAAGTCAAA
TTATTTCAGACCATTTTTAATCTAAAGTTTATTCAAAACATTAACCATGG
AAATTCAAGATACTATAAATTATTGGAGGTGGCAGAAAGGACACAGAAAT
TTCCCAGTTTTCGAGTTCCCATACACTCCCATAtcaccatagtcattata
aaaaccctggtctggtaATGTATTGTTTAAGCTTCATTGTCAACTTTTCC
TTTGTTATGAATAAAAGACAAGTTGcaatttgcatactttttgatcacgt
taccattTTTGACTCTTGGGATTGGCTAATGTTtataatcacatgatcaa
aaattATGCAAAACAAACCAATTTAAGCTACGCAAGCTCGAACTGTTAGT
AattgaaagaaacaaaagatttcCAGACCGggcttttttataatgactat
gatatCACAGGCCCGTTCGGAGCTCCTACCAACTAGAGCGATAGACCTAA
AGTTCACGGGTGTCTAAATATTcagccccttctcacagacccagtagaaT
TTTTAACtgggggacgatattttggccaatttttccagtgggaaggggtt
ctagtgggtctgtgagaagggggtgtagatATATAACATTGCTCCCTTGG
AGATGTAGGTAGgactttttaaaaagattcttattatttgaaaattttcg
gaaTATTAAAAAACGTATTACATGTAGTATTCGAGACGTCTGTCTAAGAC
ATCGCCGCTAAGTGGATTCGACTTTCTATGGAAAAAAAACACGATTAGAA
TCTTAAAGTaagatgtttttaaatttatcaaaactttgagGTTTCGAAAT
TTCTTTTAAGGCTGTTTGAGTCAAttatttttgttcgaaaaatAATTGAT
TGCTTGATAAAAGAGGAAAGACTAGAATATTTCTCCAAAACGACTCCACC
GTCAAAATTGGGCCTTGTCTTTGTCTCCTCAAGATAAGGGtccaaaagta
acttttttctttgagaaatCGTTAGATAAGGAGAAATTTCATGAGAATTC
GGGACATGGAGAAtttaaaacactttttgcttcctttttttaaataaaat
gtaacttctttttgaaaataagataTTATCAGTTCAAATTTGGAAGACGA
GTCAACTTCTGTCTGTCTACCCTGTCTCCTCAGCAGTTATTTCTTTTGCG
GAGAGTTGGATGGAGGCTTTTGTTTGATTAAAAGAAAGTTCTTCAGAGAC
TTAAAATAAAGACATTCCTACAACGCAGATATATATAATTTACTCCAACA
TCAATTAACCGGGGAAGGGTTTCTTGGATTAGGGGATGCTGAGGATGTgc
gcaatttttggaaaaaatttttttttttatattgactaGTCCAATGTACA
TGAGAAACCCAACCCTGAAAAGGTCTCtttgtttttagcttttttgttaA
CCCTTGAAAGACCAACCAGACAAAGTGAAAAACGGCCTCATAAGGCACAC
ATATACCCATCACCTATCATTGAAAAAGATTATTCACAtgcaatgggcca
ttccattttataaccatacaggggggggggggggggggggNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAGCTTTTCCTGGCGGTATccaagaagaatttccagga
ggtctaaagaagtattttttcatttttccagggggtaaacgaCTGATATT
AGTTCGTCCAACCTCACTTTCAGACATGAAAAGAATTTATTCCAGGgtct
tttttgcaaattttgcaattttccaggAGGTATCCACACGTTTCCAAGAA
AtctttttgacttaaaaaggttTGTCCATCCCCCTGTATGAAAATTCTTT
GGAACAACCCaatgaaaacttcaaaattttgcCAGCCCACTTAATTCCAA
TACAAACTTAAGTTTGCCCTTTAAAGTTATGAATTCAAATATTATCATTT
AAtgattaacaaaaataaataaggtcacGATCAAAAACTTCAATAACAGT
TCATAGTTTATAATAATCATCCTGAGGTCGACTTCCTTGTTTTTTTGGTG
AACGTATAAAAAAAGTTGACGTACAATTTATTAAAACTTTGTGTGGAGAT
TTTTGGGGTATATCAGAAATTTGACATTGATATCGATTGGACACTGTGTC
GAATAATTATACAAATTTAACAGCTCTCAGACAGACCTAAAAGCAATACA
AGTTTGCATACGGGTAAAAAACAAATCTTGTACATGAAATGTGATTCTAG
GATGGATGAAAAGAAGATTATAGATTAATATTGGCGAGTTggaaaataat
taaatttttttataccTTTATTTTTTAGCACCAGACGAATTTGAAGGGAG
TGTCATAAGCGATTATCAATCACCTTTTATCCAACAGACAACTTCACCTG
AAACTCAAAAGAAAAGGAAAGATCGAGCGTCTAATCTAAAACGATCCTTC
CTAAGTAAGTATTGTTTTTTCCTTATTCATGATAATATGCATCACcattg
actttaactctttaagaACCAATGTCGAGTATATTGGGCATGGGCTATAT
GTGCCCAGCTTGAGTTAGGAATTGAAttgtggtcaagcaaaaaaaagaaa
cttaaaagTGAAGGACACCATTTAATGTATCCAGCAGAATTTGCTCACac
aaacttttaaacaaaacaaaaaacgaaTTCCCTCCCTCCCATGCTGTTGC
CGCGCATTaataagatttgaaaaattattttgttaattttgcttTGTCTG
CATAATGTGCGTCTGCTTTAGCATTCGAAAAATGTCTCTAAAGTTTATTG
AATGGCTACGATGCTCAAATTCTTTGGGTTCAACCTAGCATTTTGGTTTT
GGTCTTTTTCGGTTAGAAAAGCAACAACACCACCTTTAGCTTGTGCGATA
TTAAAGTTTTGAACGCTAAATACTTGCTTCAGATATTTTCAAATGCACAC
AAACCTACCTCGTACCCAGGGTAATGAGCTTTTTGATGTCATTGATTTTT
GCTTAGACACAACCGTCTGGTCAGCCCCGCCCTCACTTTCTCTCCCTTGC
CGCCACGATTGCTTCTGACTCATCGTGAGCTTGAAAACATAGTTTGAACT
GTTACGTAATTGCTAGCCTCAGACCTCTTATCACGAATGATTTGTGCAGT
CTAAAGTTACTCGCTTCGCAAACGTTATAATGAGAACAGAATCATTATAA
ATCCTCTTAAAAGTTATATACACTACATTCTTttaaaacactcaaaaaat
tTGGCTAGGTCGCGATATATGTGTGTCTGAAAATGTCGTTGCTTTTCACG
TCTAATGGAATAAACTGACGTACGGCAAGTGAGAATTGTCATGTATGAAA
TCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNGATTTCATACATGACAATTCTCACTTGC
CGTACGTCAGTTTATTCCATTAGACGTGAAAAGCAACGACATTTTCAGAC
ACACATATATCGCGACCTAgccaaaaatttacaaaaatcataaaagtcAT
AACAAActgttatttatcaaaaatgatcatggaaagaaaatttctttgag
tCATCGACAGAACTTATCAAGCTATATGGCGGtagaaaagccttaaagta
CTTTCTGTGTGTGGAAAGAAGCTTTTCTTCTCTTGTCTCTTGTCATGTTA
AAAGGATATAAAATTTGTTAGTTTTGCTGTTAAACGGAGAATTTAAAGGC
GAANTaaaggttttaaaaatatttgttagTTTTGCTGTTAAACGGAGAAT
TTAAAGGCGAAAGAAGTTACAAAGGTTTAGGATGTAATCACAGGAAAAAT
TCAAACAATTAAAATCGTGACTATTTTAGTGAAGTCGTCTCTAATGCATT
GTAAAgctaactctcgctaattcgaactcgaatgAGAAGTCCCATTTGTT
CGATTTACAGAGAGATTTACAGAATTCTAATTgtaaacaatttttatttt
cagcaaaATCTTCACCAAACTTGTTGAGTTTTGATGATAATTCATCAGTA
GAAGGAAACGGAACACCTGACAAAAATAACCGGTCACCCTCTCCGACACT
GGAATACTCTAAAGATCcgtatttcttagaaaaacaGCTGAAAAAGAACG
ATGATAATAAAATCTCACAGGCTATATTAAGAGTACAGAATAGCATTAAT
ATCAAGAGAGCAGCCTCACTAGACTGGTCAAGTCTTTATAAACCAGAACC
TGTTTCAAATaatcaacaaaaattaaaatcatctGTTTCGAAACCAAATT
TATTAACAATGGCGGATGTGATCTTCGAACCGATTGTAGATACAAACATC
TCTGGTAATGCGGAAGATGAGCAGATTGTAGAAATCAATGGAGCTTCGGA
TGTCGGACAGGAAGTATCCATGGAAGAACCTGTTTTAACTAACGGACACA
CTGAACCTGAAATACTGGACACTCCAGAAGAGAGTTCGACACCTGTCGAA
GAAAATTCAACACCAGTAGTACAGGTACTAATACGTCACTCTAAAGATCT
AAGAATcctaaattttattatttacaCAGAACTACATGGtttgaataact
tttgaaacaACCTCTGCTTTTGTTTCGTGTCCTTGATCCTTAGTTCCGTT
TTAACTCTTTTGGTGCTATCATGATAATTGTAGGTCCTTAGTTTCGTTTT
AATTTCAACTCTTTTGGTATAATATCATAATTATAATTCCAACATTTTGT
AAAAGGCAAATCTTATCAACTACAAATGCAATATTCTCAACTTTGAAGCA
AGATAGGTTTTAATTTTGTTTGCTGGAAAGTGTCTATTATTTCAAGGTGC
CACAAGTTTAAATTAAGCAGCCGGAAGAAATGTTCAAATATGAGCGATAC
TGACCACTCTATTTCTTTATCTCTTACttaaggccggcgcaaatgaatcc
aacatttgatccaaaattattgttggatcaaatgttgggttCATTTGCCC
AAGTCATAAAATCGcagctttttaagaaaattgttggaaatcatgttgga
tAAAGTTTGATCACCGTCAAACTGTTCATCCAACATCTTTTAATGAGATT
GACGTCACTATTAtgttggtttcaatgttggatgcatttgcgtaatcatg
ttggatgaaaatgtttgacgtttttgcgcaaatgacttttcatgcaactt
ttcgaatttttccacgtgACTTTTCGTCCAACATGTCGTCCAACAATGAA
ttggaaatgttggattgaatattggattcatttgcgccggcctttacaca
aaatgcataaaagaaaaaaatatcatttttaaagTCGGCGAATGTTTACT
TATTTTTAATCGGTATCAAACCTTTTTGCAGGACACAACAGATAAAACAG
ATACGACACCACAAGATACAGAACAAGTAATTGTTGAGGAAGTCGTTGTC
GTGAAGAAAGAATCgtcaaaaagtaaaacaaaagaCGAACCAACCAAAGG
TGTCAAAGGAACCAAGAAAACCGCATCTACTGGTGGTGCAAAGAAAAGTA
CTTCCGTTACCAAGACGACCTCAAAGGTAGGTGGACtttcctattcatga
tattcatgatgtaatgttttctacggaaaaacCCCGGTTTtggccagtag
tggcaaattttatacaacttttgtctagtttaaatttgccactactggct
aaaatcGGGGTATCTCCgcagaaaacattacgtcatgaataccaTGAACA
TTCCTGAACATTTGTTTATTTCTTATATAGATTACACAACCTGACTTGAA
AGAATCCCTTGCTTTATCCATTTGGAACAAATTTTCGGATTTCCCATATC
AAAAATCACGTAGTGTAAATAATAAAATCGTTTGTGTCAGACAGAACTTA
AAATTGGCCCAGATTCTAATTTCTTAGAATTTTTTGATACGACGAATATC
TTTGACAGCTGATATAATTTTCGTCTTTATACTTTTCGCTCAATCAGGTT
TCAAACAATGTATCCAAGACAACGGTCACACGGACATCAATCAGCAAAGT
TCCAACCGACAAATCTACGACTAAAACAACAAGACCTACCGCAACTAAAA
CATCAACCACACGGCCCAAAACTGCACCCACATCAAGTACTCGACCAACA
TCCAGTACTCGACCAACATCCAAATCTCCTGTCAAGCCAGTCTCGACAGC
TCCTTTGAAAAAGAAACCAACATCTGCTGGAACCACAAGGCCATCAACAG
CGACGTCGAGACCCACAACTGTAGCCAGTAAAACGTCCTCATCAACAACC
AAAACCGCCAAGCCAACAGTCAGCAAAACGACTACACCCAAACCAACCCC
AAAAGCTCCAGGGGTGCCTCGACTTGGAAAACCTGGACAAAACATAGCGA
AAAAACCAGCAACAAAACCAGCTACTGGAGTTAGTCGCACAACAACGTCT
GCAACCTCTAAAACAGCAGCNCGCCTCGACTTGCTGATAGAGGAAAACCT
GGACAAAACATAGCGAAAAAACCAGCAACAAAACCAGCTACTGGAGTTAG
TCGCACAACAACGTCTGCAACCTCTAAAACGGCAGCAACAGCTACAAAAA
CATCTTCCACGACCCGAAAACCAATCACAACCACAACTAAAACGACCACA
ACAACAaaaccaaaatcgacaattggAGCAACTAAACCTTCATCAAGCAC
AACAGTCAAAAAGACAGCAAAAACTGCTGACCCAACGAAATCGGTCACAA
GACCTGCTTCAGCATCATCCCTCAAATCAACGCGACCCGCATCTAGCAAA
CCTACAACAGCAACTAAAGGTCGCACGACAACGTCACCTACAAAACCACT
CTctacaaaaacaacaaagactTCTACAACAAAAACTACAGTAGCCGACA
AATCAAAAAAACCGGCATCCTCAGTTGCTAAGAAACCGACCGGTAAAGTT
TCTTCAGTTGGCGATAAAACGAAACCGAAGAAAAAGAAggaaggaaaaga
agaaaaaccaaCGAAAACAGACAAAGAAGTTATCGTGGTTCCTGTTGCAG
CAGTAGAGGACAATCCACAAGATCTTGAAATCAACCTATCAGAGGCCGCA
AAACCAGCCGATGACATCATTGTCAGCCAATCAGAAGAAGTTGTTTTGGC
TACAGAGGAAGTCAAAGAACCACAAACATCAGATTTGGTTGAAGTTGAGC
CTCCACAAGTAAACCAATCAGAACCCGAAGTTGCAGAGACTAGCCAATCA
GTGACCGATGTTGCAGAGACTAGCAAACCAGAGGCCGAAATTCCAcaaat
caaccaatcagagCCCGAGATTTTACAACCCAGCCAATCAGAAGCGTTCA
CTTTGATCCAACATGAAGAAGTATGCGAAGAACAAAGCGATAATGAAGAC
AAAGAAAACATTCCAAAAGTTCATTTCGAGCAACAAGAAATCTCCAACAG
TCAACCAACGCCGTATGACTATCATGCGACGTATAGTCAAGATTCAGACC
ACGATTTATATTGTGTCACGCCGTTAGTGAGCGGGCAATATGATAGCGAG
ACACCCAACTCTGAATTCTCACCTAACCAATCACCAAGTAAAGGACAATA
CAATGAGAACTCGTTTGCAACGGTCGAAGAAGAAGAGAGAATGGAAGAAT
CACCTGAAATCTCTATCACAGGTAAGATGACGGTTTTAAAAGAATTGTTG
TTGAAAATTAACTGTGAAGTGAATGTGAGAAGCCCAAGAATCTTAGAAAA
TGTTACTCTTGTTACGTTCTCCACTCTCTCGGGTGGCTGATTTGCTAAAA
CTGAAAGATCTTTCCACAGATGGTTCATATTTTTCACGCAATCAGGTTGA
CAAAATTCGGCTTCTTGCTTTGATCTTAATGATGGCTTAACAAAGCTTAA
ACTATTACGGCCATTCAAAGAAATTGTCAACCACGGTTGATATGTACGAT
TGAACCGCCTCCATGGATGCTATCAAATAATGCATTGTTGGCGGTGCCTC
TAGATCTCAAATGGCCGTATACAGACTAAAATGAGAGTGGTGTAACGTAC
CCATTCCTTTGGAATGACTGTTTTAGTCTAACAAGTAGAGTAAATTCAAA
ATTGACATATGATAATCATGTTAACTTTGGTTTTTATAGGGGCTTCAAGT
TCGCCAAATGAAATCTTTGAAGAAGACCCTGGACGTGTGGGAAGGTTAGA
TTTCAATCAAGAATTCGACGTCACGTCACCCGAGAAAGAAGTCGTCACAC
CGAACATCGAAACAGAAACAATAATTTCACCGAGCGATGAACCGGAAACG
GTCGTATCACCGACAACCGAAACAGACGATCTTGTCTCTCCATCATCAAG
ACAAGAAGTAGAAGATATTGCTCCTCCAGCAGTAGAAACACCTGAATCTT
TTTCACCAAACGAAGAGCGACAGGACATCATTTCTTCTGCTTTTGATCAT
GAGGTAGAGGCGTCACCGGAAATCATTTCCCCGACTCCAGAAATTAGTTC
ACCAGCTCCAGAAGAGATTCTTTCACCAGTAAATGATAGCCAAGATGAAG
TGTCCCCATCTCTGGAAGATGAAGAGATCATTGAACAAGTAACCGACTCA
CAACTACAACAGGAACCAGAAATCACTTCCCCAATAGTAGATGAAAGAGA
CGTCGTTTCTCCAGCTGAAGAACGACAAGACGTTGTTTCACCGACGGAAG
AAcgacacgacgttgtttcaccAACGGAAGAAcgacacgacgttgtttca
ccAACGGAAGAAcgacacgacgttgtttcaccAACGGAAGAACGACACGA
CGTTTTTTCACCGACGGAAGAAATTCAGGAAAAGTCATCTCCAGTTGAAG
AAGCAGAGCCCACCATGTCACCATCAGAAGAACAAGCAGAAATCGTTTCC
CAAAGTGAAGATGCTGGAGACGTAGTACCTCAATCTGTTGACCATCAAGA
ACCAATCTCACCTGTAACTGAGGATTCACATCAACTTGTTTCCTCAACCT
CGGAACAACCAAAAGAATCCTTTTCAGCTGAAGAGCCACAAGAGCTTGTG
TCACCAACAGTGGAATCAAAAGAAATCGTTTCACCAAGTGAAGAGCCAGC
ATCTTTCGCCGAACCATCTACAGAGGAAGCAACCGAAGATTTCTTATCAT
CAGCTATTGAAGAATCAGACCAGCAGATATCAACTGAAGTTCAAGAATCT
CAAGAGATAGCACAACCAGAGGTTGAAGTAAGAGCCGAAATTGGTTCTCC
AGATCAAGGAATTGTATCTCCATCACACGACGAAATTCTTTCCACCAATG
ACCAATCAGAGATTTTCACTTCATCTGCCAGTGCACACATTGAAATAAAC
GAAGAACGACAAGATGTAATTTCACCGAATGAACAACCCTACCAAAGCCG
AGAACTGATTTCACCGACTACAGACGAGAGCCGAGAACTTCTCTCGCCGA
CTACTGACGATGAACGACAAGGCACCGAATCACCGATGGAAGGAAGTATC
GAATTCGAATCCCAAATCATTGAATCTGTACAAATCACAGAGAAACAAGA
AGTTATGTCGGCGACCGAACAACGAGGAGTAATCATCCCATCGGGTCTCT
CCCGAGAAGAGCTCGCCTCCCCGACTGCTAACTACGAAGACCCAGATATC
ACCTCACCATCTAAAGAACAAAGACATAGACTAATTTCTCCAACTGATGA
CCAACCGCAAGAAAATGCTTCCCCATCAGATCAATCAGGAGAAGAAACTT
CCTCACCAACTCCAGGAcaaggaaaaaactttttttacacagAAGAAAGA
CAGCAAGAAAGTGTCTCTCCAAATGACGAAACCACTTCATCTGTCCAAAA
CGACGAGCAAGATCGCCAAGAGACTTTCCAACAAGAACATCAAACCGATG
TCACTTACACACAAGAAACACAATCATTCGAAATCCATTCTTTCGAAAAt
aataatgatgacgtcatcaattcaATGGAAACCAACTACACCGCTGAAGT
CCAGTCCATCGCCATCGAAACAAGTCATAGCCAGGAAACTCATATCATTG
AAACCGTTGAAACAAAAGATAGCATAGAAACCCAGTCTGTCGAGATCAAA
CAAGCATGGGCTGACCAAGAATCTACCGTAGATGCTTCTTACGTCATTGA
CGCCCGATCAGACGGCAAAATCCAAATCGGGGAATATTCATCTGCATTTT
CCGAATCGGATTCAAGCGAACAAGAATCACCAAATCATCATGTTATGATC
TCTAAAGCAACACATCAAAATGGATTCGCAAATACCGAAGAATTGGACCC
GTTAGCACCGATGACCCAGGAACTGGACCCCTTAACGACACCACCTCAAC
CGACCCATTGTTTTCAAGAGGAACACGGACAATTTAATGCGCAAGGTGAT
GAAAATCAGAATGCGTATTTTTGAAGGATATGATGAATGGAAGGATGGAG
ATTTTTTAGAATGAATTCattaagaaaatagaaaagaacaGGTCGTCTAA
TCTAGCCTGGATAGTCCTTGCAGACGGAGCTAAAATTATGGGTGAATGGC
ACCTGaggaaaaaaactaaattgGATTGACAATCATAAGTGCTAAATGGA
CttctttaatttgaaaatagatccataaatgattttcttttctcttACTA
TTTTAATgacagaaaaatagaaaaacacttttttttaagtttttagtAGA
AATTTGAAGGGAGAACTAAGGTATTTCGGAGGCAAAATATTTCTCAAGTA
AATGCCTCGATTGATTGAATTTACAAGCTTTCTGATTTTAGTCTagagtt
cttataaataaaagatGCACCAGATATGGGTAGCCTCGGAATGAAACACA
CTTTTCAGAATAAAATGACTTTTGAAACTgaggaaaaactgtttttgtta
ataggataaaaatatttatttgtatAAAATCtattgttaattttattttg
caaagaaaaaaacttttgaaatggaAGAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029774XLOC_029774Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046644-exon-scaffold_116-1491911889:328695..328898TCONS_00046644-exon-scaffold_116-1491911889:328695..328898Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1510915933:328695..328898TCONS_00046644-exon-scaffold_116-1510915933:328695..328898Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1575043694:328695..328898TCONS_00046644-exon-scaffold_116-1575043694:328695..328898Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1491911889:335223..335348TCONS_00046644-exon-scaffold_116-1491911889:335223..335348Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1510915933:335223..335348TCONS_00046644-exon-scaffold_116-1510915933:335223..335348Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1575043694:335223..335348TCONS_00046644-exon-scaffold_116-1575043694:335223..335348Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1491911889:343548..344068TCONS_00046644-exon-scaffold_116-1491911889:343548..344068Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1510915933:343548..344068TCONS_00046644-exon-scaffold_116-1510915933:343548..344068Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1575043694:343548..344068TCONS_00046644-exon-scaffold_116-1575043694:343548..344068Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1491911889:344926..345120TCONS_00046644-exon-scaffold_116-1491911889:344926..345120Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1510915933:344926..345120TCONS_00046644-exon-scaffold_116-1510915933:344926..345120Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1575043694:344926..345120TCONS_00046644-exon-scaffold_116-1575043694:344926..345120Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1491911889:345542..347215TCONS_00046644-exon-scaffold_116-1491911889:345542..347215Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1510915933:345542..347215TCONS_00046644-exon-scaffold_116-1510915933:345542..347215Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1575043694:345542..347215TCONS_00046644-exon-scaffold_116-1575043694:345542..347215Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1491911889:347684..350525TCONS_00046644-exon-scaffold_116-1491911889:347684..350525Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1510915933:347684..350525TCONS_00046644-exon-scaffold_116-1510915933:347684..350525Clytia hemisphaericaexon
TCONS_00046644-exon-scaffold_116-1575043694:347684..350525TCONS_00046644-exon-scaffold_116-1575043694:347684..350525Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_116supercontigscaffold_116:328695..350525 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.96022	1.63293	2.76446	0.889872	10.5085	3.83829	60.4164	72.5606	20.4549	17.875	12.9988	10.5027	15.9142	10.8048	3.5962	3.84383	16.0286	17.0665	24.2874	25.8091	23.5539	26.1045	8.32146	16.0817	29.3189	26.8994	12.6923	10.1769	1.59207	0.802065
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046644 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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