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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046737 ID=TCONS_00046737|Name=TCONS_00046737|organism=Clytia hemisphaerica|type=transcript|length=966bp
TTTTTTTTATACTAATGAATCAGCATTGATCAGCCATATTGTTCAATTGT
TCAATGATTGACTTCTCATTAACGTAATGAAGGGAAATGGAGAATTTCAA
CCATACCAGCCATACTTGACATTGAATTGTACTTTTAATGGACTatcttt
caaaaacaaaatacaaatgTGGATACCAGATAAACATTTTGGTTGATTGA
ATAGATAACTTTCAAACCATAATTGATGGATAAACGAGGTGGCTTGAACA
ACTGATGAAGGAACGTTGACACAATTTGATATCTTTGCTCTGCAAATAAT
CATCTCGTGATGAAGAATTGATTGATTTTGACAATTGTAATGTTCCGTAG
ATGGTTGCTTAATTTTACGAAGTTGTTGTTCGACTTTGACGTTGTTGTAA
TTGATCTGATAAATTTTCAGTTCGATGTCGATGCTGTACCGAATATTGAT
GCTTGTATCAAGGAGGCTGATTGTGCACGAAGGAGAACGTTCGGCTTGTT
GAATTTCATCACTTGATACGATTGCATTTGGTTTCTTCAGCATTNAAATA
TTGATGCTTGTATCAAGGAGGCTGGTTGTGCACGAAGGAGAACGTTCGGC
TTGTCGAATTTCATCACTTGATACGATTGCATTTGGTTTCTTCAGCATTG
ATACGTTGACGTTGGGGTACTTCTTTGAACCTTTAAGTTTTTCTAAATAC
TCGAAAGCATTGTAAAAGTTATTGACGTAAAACTTATGTAATGGATTTAA
ATCATTCTGTTCATCTGGGAAACCAGATTCTTCCCTTGATGAAAAATTAC
ATTCCGTCGATACCACAGTTGTTATCGTCTTATTCTTGATTGTGTTGGTT
TCAGTAACATTGAGAATAATAGCTCTTACCGAATTGATGGGAAGATCCTT
TTGTGGCACCCACATGTCTCCATTGGTAAATTTCGACAGGCTGCCGACAT
TTTGCAGTAAACTGTN Run BLAST on NCBI protein sequence of TCONS_00046737-protein >TCONS_00046737-protein ID=TCONS_00046737-protein|Name=TCONS_00046737-protein|organism=Clytia hemisphaerica|type=polypeptide|length=289bp
XSLLQNVGSLSKFTNGDMWVPQKDLPINSVRAIILNVTETNTIKNKTITT
VVSTECNFSSREESGFPDEQNDLNPLHKFYVNNFYNAFEYLEKLKGSKKY
PNVNVSMLKKPNAIVSSDEIRQAERSPSCTTSLLDTSINIXMLKKPNAIV
SSDEIQQAERSPSCTISLLDTSINIRYSIDIELKIYQINYNNVKVEQQLR
KIKQPSTEHYNCQNQSILHHEMIICRAKISNCVNVPSSVVQATSFIHQLW
FESYLFNQPKCLSGIHICILFLKDSPLKVQFNVKYGWYG Run BLAST on NCBI transcript from alignment at scaffold_116:299807..300772 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046737 ID=TCONS_00046737|Name=TCONS_00046737|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at scaffold_116:299807..300772 (Clytia hemisphaerica)
NACAGTTTACTGCAAAATGTCGGCAGCCTGTCGAAATTTACCAATGGAGA
CATGTGGGTGCCACAAAAGGATCTTCCCATCAATTCGGTAAGAGCTATTA
TTCTCAATGTTACTGAAACCAACACAATCAAGAATAAGACGATAACAACT
GTGGTATCGACGGAATGTAATTTTTCATCAAGGGAAGAATCTGGTTTCCC
AGATGAACAGAATGATTTAAATCCATTACATAAGTTTTACGTCAATAACT
TTTACAATGCTTTCGAGTATTTAGAAAAACTTAAAGGTTCAAAGAAGTAC
CCCAACGTCAACGTATCAATGCTGAAGAAACCAAATGCAATCGTATCAAG
TGATGAAATTCGACAAGCCGAACGTTCTCCTTCGTGCACAACCAGCCTCC
TTGATACAAGCATCAATATTTNAATGCTGAAGAAACCAAATGCAATCGTA
TCAAGTGATGAAATTCAACAAGCCGAACGTTCTCCTTCGTGCACAATCAG
CCTCCTTGATACAAGCATCAATATTCGGTACAGCATCGACATCGAACTGA
AAATTTATCAGATCAATTACAACAACGTCAAAGTCGAACAACAACTTCGT
AAAATTAAGCAACCATCTACGGAACATTACAATTGTCAAAATCAATCAAT
TCTTCATCACGAGATGATTATTTGCAGAGCAAAGATATCAAATTGTGTCA
ACGTTCCTTCATCAGTTGTTCAAGCCACCTCGTTTATCCATCAATTATGG
TTTGAAAGTTATCTATTCAATCAACCAAAATGTTTATCTGGTATCCAcat
ttgtattttgtttttgaaagatAGTCCATTAAAAGTACAATTCAATGTCA
AGTATGGCTGGTATGGTTGAAATTCTCCATTTCCCTTCATTACGTTAATG
AGAAGTCAATCATTGAACAATTGAACAATATGGCTGATCAATGCTGATTC
ATTAGTATAAAAAAAA Coding sequence (CDS) from alignment at scaffold_116:299807..300772 >TCONS_00046737 ID=TCONS_00046737|Name=TCONS_00046737|organism=Clytia hemisphaerica|type=CDS|length=870bp|location=Sequence derived from alignment at scaffold_116:299807..300772 (Clytia hemisphaerica)
NACAGTTTACTGCAAAATGTCGGCAGCCTGTCGAAATTTACCAATGGAGA
CATGTGGGTGCCACAAAAGGATCTTCCCATCAATTCGGTAAGAGCTATTA
TTCTCAATGTTACTGAAACCAACACAATCAAGAATAAGACGATAACAACT
GTGGTATCGACGGAATGTAATTTTTCATCAAGGGAAGAATCTGGTTTCCC
AGATGAACAGAATGATTTAAATCCATTACATAAGTTTTACGTCAATAACT
TTTACAATGCTTTCGAGTATTTAGAAAAACTTAAAGGTTCAAAGAAGTAC
CCCAACGTCAACGTATCAATGCTGAAGAAACCAAATGCAATCGTATCAAG
TGATGAAATTCGACAAGCCGAACGTTCTCCTTCGTGCACAACCAGCCTCC
TTGATACAAGCATCAATATTTNAATGCTGAAGAAACCAAATGCAATCGTA
TCAAGTGATGAAATTCAACAAGCCGAACGTTCTCCTTCGTGCACAATCAG
CCTCCTTGATACAAGCATCAATATTCGGTACAGCATCGACATCGAACTGA
AAATTTATCAGATCAATTACAACAACGTCAAAGTCGAACAACAACTTCGT
AAAATTAAGCAACCATCTACGGAACATTACAATTGTCAAAATCAATCAAT
TCTTCATCACGAGATGATTATTTGCAGAGCAAAGATATCAAATTGTGTCA
ACGTTCCTTCATCAGTTGTTCAAGCCACCTCGTTTATCCATCAATTATGG
TTTGAAAGTTATCTATTCAATCAACCAAAATGTTTATCTGGTATCCAcat
ttgtattttgtttttgaaagatAGTCCATTAAAAGTACAATTCAATGTCA
AGTATGGCTGGTATGGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046737-exon-scaffold_116-1491911889:299807..300772 | TCONS_00046737-exon-scaffold_116-1491911889:299807..300772 | Clytia hemisphaerica | exon |
| TCONS_00046737-exon-scaffold_116-1510915933:299807..300772 | TCONS_00046737-exon-scaffold_116-1510915933:299807..300772 | Clytia hemisphaerica | exon |
| TCONS_00046737-exon-scaffold_116-1575043694:299807..300772 | TCONS_00046737-exon-scaffold_116-1575043694:299807..300772 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:299807..300772 . |
Blast
The following BLAST results are available for this feature:
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