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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046753 ID=TCONS_00046753|Name=TCONS_00046753|organism=Clytia hemisphaerica|type=transcript|length=1527bp
ttttttttgaattaacCTACTTTTTAGGGCCCTAAAATACAGCGTAAATG
TTATATATACTGCAGTAGATCCCAAATGGAGTTTAATTGAACTCGGATGG
AGCTTCTTTGTTTAATCAATAGAAAACCAAATtcgaaatttttggaaaaa
gagtATCTATTAAGATGAACAAAATtgtgaatatatttattttacaTAAA
TTCTACAATTCCCTTAAGCCAGGGTAACTACAGCGTTAATTTATGTTGGA
AAAAATTAACTAATGAAAATAGTCGCATTGCACTTAGGTTGCACGTCTTC
TCTCTGATATGTTCTGATATAAGGGGATGTGTATCGTGTATAAATCTCCT
GTCCGAGAGTTACCACAAGTTTAGGGTgacctgtttcaattttctcaaaa
aggtTTAGAAATCCAATGATTGAATTAACCTCTAGCaattcgaatttcaa
attttaaatttaacgaaatttaaagatctctcatATAAATACAAATCTAG
CTAACCAAGTTTCTAagacacaaaaagacaaagacgGGGGTTACTCTCGG
AGAGGAATTTTGTACACAATACGCatccctatatcaaaacatatcaaagg
GGATGCATGCAGTCTACATTGCACTGGGATTTCTTTTAGTTGTGCTCAAG
ATAACCAAAGGAACATACTATATTATAAATTCGACCATTTTTTCCAAACA
AGTTCAACGTTTTAGTCTCGTTTTGATGTAGTCCGTCTCATACTGATGAT
AACGAATCCAATTTCTTGTTTTGTTATTGGTTTAtcgtgaaaatgacgtc
atcattcttaaaaaaaacactatCAACCTCGTTTTGGTCTTTTCCAGAAA
AGAACCGTATACTCCCgattgaggaggtccatccctctgcggctggaaat
gctgtaactgCTGGAATTCCAGGAGaattcaggtttaaacccctctagaa
ttctgaattttaagGATTTAAAAAACTACCACCatttatttctggaaaag
ccaaatgtctcgagaaaaaaatatgtcTTAGGTTTCAGTAATAACGTAAT
AAATTAAGTTTTGGATACACGGGGGGACGAGGTTGGAACATTACGTCATT
AAGTTTGATCACCCCCGTCTTCATTTTCACAAATCTGACTAATCCGATTG
GCTGATGAATGACTACTGTTCTTCTTTTTGTGGTTTGTTTTAGATTCGAT
TTTCTCTTTATTGTATTTGATTGAATCTTTGATTTTGGAATGACCAAGTT
TGGGTACATTTTCGTCGTCGCATTGGTGCAATGTTGGATCATCGAAGACT
TCTTCTTCTTGGCTACTTTcgttattgttgttgttgttttgtttttgctg
aTCTGACATGTTGGTACTAATTTGTACCTTCTTAGTATATTTTGTTGTGT
CgtgttttttgttgttggtttttttttgctattttttgttctaGACTGTC
AAAAAAGGTTGAATTCAAATTATATAATTCTGAACTAACTAattacaatc
agtgacaaaatatgtAGCAATTTCTTG Run BLAST on NCBI transcript from alignment at scaffold_116:702056..703582 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046753 ID=TCONS_00046753|Name=TCONS_00046753|organism=Clytia hemisphaerica|type=transcript|length=1527bp|location=Sequence derived from alignment at scaffold_116:702056..703582 (Clytia hemisphaerica)
CAAGAAATTGCTacatattttgtcactgattgtaatTAGTTAGTTCAGAA
TTATATAATTTGAATTCAACCTTTTTTGACAGTCtagaacaaaaaatagc
aaaaaaaaaccaacaacaaaaaacacGACACAACAAAATATACTAAGAAG
GTACAAATTAGTACCAACATGTCAGAtcagcaaaaacaaaacaacaacaa
caataacgAAAGTAGCCAAGAAGAAGAAGTCTTCGATGATCCAACATTGC
ACCAATGCGACGACGAAAATGTACCCAAACTTGGTCATTCCAAAATCAAA
GATTCAATCAAATACAATAAAGAGAAAATCGAATCTAAAACAAACCACAA
AAAGAAGAACAGTAGTCATTCATCAGCCAATCGGATTAGTCAGATTTGTG
AAAATGAAGACGGGGGTGATCAAACTTAATGACGTAATGTTCCAACCTCG
TCCCCCCGTGTATCCAAAACTTAATTTATTACGTTATTACTGAAACCTAA
gacatatttttttctcgagacatttggcttttccagaaataaatGGTGGT
AGTTTTTTAAATCcttaaaattcagaattctagaggggtttaaacctgaa
ttCTCCTGGAATTCCAGcagttacagcatttccagccgcagagggatgga
cctcctcaatcGGGAGTATACGGTTCTTTTCTGGAAAAGACCAAAACGAG
GTTGatagtgttttttttaagaatgatgacgtcattttcacgaTAAACCA
ATAACAAAACAAGAAATTGGATTCGTTATCATCAGTATGAGACGGACTAC
ATCAAAACGAGACTAAAACGTTGAACTTGTTTGGAAAAAATGGTCGAATT
TATAATATAGTATGTTCCTTTGGTTATCTTGAGCACAACTAAAAGAAATC
CCAGTGCAATGTAGACTGCATGCATCCcctttgatatgttttgatatagg
gatGCGTATTGTGTACAAAATTCCTCTCCGAGAGTAACCCCcgtctttgt
ctttttgtgtctTAGAAACTTGGTTAGCTAGATTTGTATTTATatgagag
atctttaaatttcgttaaatttaaaatttgaaattcgaattGCTAGAGGT
TAATTCAATCATTGGATTTCTAAacctttttgagaaaattgaaacaggtc
ACCCTAAACTTGTGGTAACTCTCGGACAGGAGATTTATACACGATACACA
TCCCCTTATATCAGAACATATCAGAGAGAAGACGTGCAACCTAAGTGCAA
TGCGACTATTTTCATTAGTTAATTTTTTCCAACATAAATTAACGCTGTAG
TTACCCTGGCTTAAGGGAATTGTAGAATTTAtgtaaaataaatatattca
caATTTTGTTCATCTTAATAGATactctttttccaaaaatttcgaATTTG
GTTTTCTATTGATTAAACAAAGAAGCTCCATCCGAGTTCAATTAAACTCC
ATTTGGGATCTACTGCAGTATATATAACATTTACGCTGTATTTTAGGGCC
CTAAAAAGTAGgttaattcaaaaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046753-exon-scaffold_116-1491911889:702056..703582 | TCONS_00046753-exon-scaffold_116-1491911889:702056..703582 | Clytia hemisphaerica | exon |
| TCONS_00046753-exon-scaffold_116-1510915933:702056..703582 | TCONS_00046753-exon-scaffold_116-1510915933:702056..703582 | Clytia hemisphaerica | exon |
| TCONS_00046753-exon-scaffold_116-1575043694:702056..703582 | TCONS_00046753-exon-scaffold_116-1575043694:702056..703582 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:702056..703582 . |
Blast
The following BLAST results are available for this feature:
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