TCONS_00046773 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046773
Unique NameTCONS_00046773
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length763

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046773 ID=TCONS_00046773|Name=TCONS_00046773|organism=Clytia hemisphaerica|type=transcript|length=763bp
GACAAATTTAACCGAGAACATAATGGTGTTCCTATTTGCTTCCAAAGTAT
TTTAGGATTGCTTAGAAATCCGAACTTCAATCGATTTGAATATCACTCAA
ACACGCTTCTACCAGACACGCATTTTCCAAAGACAATTCAAAATTTAACT
ATATATTTTCAATCAAACCTGGGAAGTGATGCGCTTCCCTTGATAAAGGA
AGACACAGATGCACTTCTTCAACTGATGGTTTTTCTGAAGAAGAAATTAT
TGCAACTCGATGGTACAAAGTTTTTTGTCGTGATGAAAGGAGATGAAAAT
GCATCAATGATGCTTTTGTATCAAAAACTTGGCTTTGAAGTCATCCAGGA
TCAGGTAATTTCAGACCGAGATTTACCGGATTTAAAGTTCGACTCCTTGA
ACGATATCGATTATTCTGATAGCTTAATCACCGTTTATCCAGAAGATCTT
TTAACAGACAAATCTTTAAAACTCTGGATGAAAGCAATTATCAACACGGT
TGAATCGCATCCACGAAAAGgtgaaatgaaaataacaaaaataattgaat
aatttttgaacaaaactttAACGTTTCGGATattaatttaaattaatttg
aatAATGGAGGATTTCTCATGACGCAGAACAAACGTACAAAGTGAATTAC
AATATTTCGTTTAGCACAGTCAATTTGTCAGTTTTCTTTTGCCGGAAAAT
GCTCTTTAAATGTTCTCTTTCTTAATCATATTGTGAGTATTTGTGTTATT
TCCTATGTAAATG
Run BLAST on NCBI

protein sequence of TCONS_00046773-protein

>TCONS_00046773-protein ID=TCONS_00046773-protein|Name=TCONS_00046773-protein|organism=Clytia hemisphaerica|type=polypeptide|length=183bp
DKFNREHNGVPICFQSILGLLRNPNFNRFEYHSNTLLPDTHFPKTIQNLT
IYFQSNLGSDALPLIKEDTDALLQLMVFLKKKLLQLDGTKFFVVMKGDEN
ASMMLLYQKLGFEVIQDQVISDRDLPDLKFDSLNDIDYSDSLITVYPEDL
LTDKSLKLWMKAIINTVESHPRKGEMKITKIIE
Run BLAST on NCBI

transcript from alignment at scaffold_117:285158..294893+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046773 ID=TCONS_00046773|Name=TCONS_00046773|organism=Clytia hemisphaerica|type=transcript|length=9736bp|location=Sequence derived from alignment at scaffold_117:285158..294893+ (Clytia hemisphaerica)
GACAAATTTAACCGAGAACATAATGGTGTTCCTATTTGCTTCCAAAGTCT ATTAGGATTGATTAGAAATCCGAACTTCAATCGATTTGAATATTACTCAA ACACGCTTCTACCAGACACACATTTCCCAAAGACAATTCAAAATTTAact atttattttcaatcaaaCCTGGAAGAATTATCTTTGGATAGTGTATTCAT TTTGGAAGACACAGATGCCCTTTTTCAACTGATGGTTTTTCTGAAGAAGA AATTATTGCAACTTGATGGTACAAAGTTCTTTGTGTTTATGGAAGGAGGT GAAAAGGCAGTGATGCCTTTGTATCAAAAGCTTGGCTTTGAAGTCGTCCA AGACCAGGCATTTCCGGACCGAGATTTCACGGTTCTAAAGTTCGACTTCA AGAACGATATCGATTATTCTGATAGCTTAATCACCGTTTATCCAGAGGAT CTTTTAACAGACAAATCTCTAAAACTCTGGATGAAAGCAATTATCGACAT GGTTGAATCACATCcacaaaaaagtgaaataaaaataacaaacagaTATT ATTGAATACAACTTTAAATAACGTTTCAGATATTAATGTACAACTTCATT TGAATAATcactgaaaaaggaaaattattaattGTACACAAAAAGAATGA TATGTAATATTGTACGAGAAGGTGTTTGAGAAACAATAATTTCCGGACAG CAGAAATTGATATTCCGTCCGTTAACGTTAACACGAAGATTTCAAAACCC TCTTTAACTTCATTACGCGATAAATAATTCTACATTTACAGTTGTATTAC ATCATTTACACATTATATTACAtccattacatgttttttttaagaacaaa ctgtataagaatACAAAGGCATCGActttaataaagaaaattttgaatca tttttagACTTAgatgaaaaagttaagaacttccaaaggctccaaaaatt aataaaaagataCTTTTTGACGCCAtttcctaaatatttttttaacttca aGAAGCTAGAAATATATTGATGACATATGAAAAAACCATATCGGGCAGCC TTATAACCTAAATGCCaggaaaagatttttgttaTACACTATCCATTTAA GAATTCGGTTTTAGTAAATAAACTTAAAGTTTACCATTGGAAAATTATAT TGCACTTGCATTTAAACCAAACAAAACGAAAACTAAAAGATTTTATATAC ATACCGACGGGTCAGTACTTTTATTTTGTCTCTGCTTGCTAGAAATAAAG CCACCGGGATGTTATTTTCTTCTGAAGATTTTATTTCTTGGACCAGGGTT ACAGATGTCACTCGAAACTGTCAGTGGGTGGATATGGTATGTATACGAAT ACTAGTACAacttttcaaactaaaaaatgaCGTTGTACGTATAACTGTAA TGAAACAATTTTCCgactttttcatgtttttggctTGTAATcccgaaaga aaaaaaacacttttgcgTAAAAACATGAACACTTCATGGAGCCATCTTTA AAGTGGGCTCCTCAGATGATATTTTTATCGCATAAATCTCAATTTACAAT ATTACTCAACATTTATGGCTCACTTCATACAGTACTGGGAAAGGGAACAG TTTCAAgggtgtacacgtttttttataagaacaaactatatgagaacata aggtATCGATAGCGAAAAtcctaagaacaagttaagaacattttaaggtt ttgacaCCCTACGCTCTACGATATcttaggaacatttttaggcttaaaac tgtaAAAACTAGGAAACACCTaaaaaaggcttcaaaaattttggatgttt ttataaaaaacgtgtgtaAAGATTTGGAACTTTTACACTTTAAGTATGCT TGATGattaaataaaatggaaaaAGAAGTTACTTTATGCAAagatccaaa atctttgaagtctttggatgtttttaaatttttgtggtttttgGATCAAC TTTCAGTCCTCAAGCCCAACCCAATATTTCTGGGTCGTTTGTTAGTTTCT CCACTGGGAGAggaagagttttttttttggaaataatttcCTCATGCAGG GACGAACGTGGTCTTAGTTGACTGAGAGGCACCAGTTCTGGAAAGTCTGT TGAAGCCATATGTTGCTACAAGGAGCTACCATATTTTTGGTAGAACTTAC CAAATTTCTTGAACTTCTTTTCCTCAAAGCGCTGTCTCTTGAAGAGACTG CTTTCTTATTCTTCTTCTTAGTGATCTCTTTCTCGATCACTTTTGTCTTC GGTGCAAGGCTCACTATCCTCCATAACATTGTGATTATCCTTCCTACTAC GTTTAGGGGTCACCTTCCGTATGGTGAATCTCCCATGATTTAGAAGATTA GCCGATGTAAATTTGATACTATAACCACAAAACCTTTACTTGCATCATTC CGTTAGCAAAAAGCAACAGAGACATCAAAAACTGATTATTGCTGTAGACT TCAACGCCACAACCAATGTTGCACAATTCAAAAGTAATTTCAGCGGAAAC ACAAATGTAATTATAGATCGAAACTGTAATGATAATGGCCAGCGACTCAA ACAATTATGCCAAGCTGAGAAGCTCAGTATTTCTTCGACGTTCTTCAAAC ACCGTCTGTTCCATCGCTACAATTGGCACAGTAACGACCATAAAACCCGA AAAATACTTGACTATATTTTAACCGAACAATATGTTCAACAGTTTATGAC AGATTGTCGTGTCTACAATGGTTTTGATGTCGAAACCGATCACCGCCTTA TAAAAGCTACTATGTACGCTCCTTCCAATAGAAACGCAAGAAAACAACAT TGCAAAAACCCTACCCCGCCCAAAAAGAGACTTGATCTGAAAAAACCTTT GGATCCAAATATTCGTACAAGATTCTCTGCCAGAATAAATGAACAgatta aaaataccaaaaatgaaaattttgatgcaTAATCAAGGTCACAAAACCTG ATAAACGTTATCTCTGATTCAGCCAACGAAATCTTACAAGAAAAACTGAA AGCAATGGATACATCAACCAAATTTCATGATGATGAACGATTCAACGAAC TACTTGATATTAGATCGAAAGAACCGAAAGATTCTAATACTTACAAAATC TTgaccaagaaaatcaaaaagcaTGCGAGCTCAGAAATAGCCGTCTCCAA CGTGAAGCTGAACAAATCAACAGCTATGCAACCCGTCGTCAAACCGAAGA AATATTCCGTCTCATGAAAACTAACGATTCTTCttttaaatcattaaaaa acacTGGTAAATGTGAACCACAAAAACTGAAAGAACATTTCTCTAAACTC TAAATATTTCAACGTTGCCCCTCCAACTGAAACCCCTCATGAATTAAAAG AATCACCGCAATTCATTAGAGACTTACAAAACTCACATCATTTCGATCTT GATCAGAGCCCACCGACCATCGAAGAAATTAAAAAGACATTGGTATCGTT AAAAAATGGAAAGGCTTCCACTGACATCCCTCCTGAATTTCTAAAGTACT CTGTGAACTCCGAGGAAATGTTAAATGAAATCTACAAAATATTCTGTGCT GTTTGGGAAACCAAAATCATTCTGATCAACTGGACACATTCGAAACTTGT TTGTTTGTGGAAAGGTGCATCTAAAGGAAGTCCAACAGATCCTAAAACAT ATCGAGGGCTTCAGATTGGAACCATTATGTGTAAAATTCTTGTTATCGCT ATCCTAAATAGACTGAAAGGCTGGTACGACCAGACCCTATTTGACCAACA ACAAGGCTTTCGTTCGGGAAGAGGAACCTCTGACGGTATTTTCGTGACGA AAAGAATACAGCAAATAACCGATATGATGAAAAAGCCTGCATTTGTTTTG TTCGTCGACCTCAGCTCCGCTTTTGATCTTGTCGTGAGAAGTTGGCTATT CAAATCTATCCAACAAAGGTTTCCTCCTAATGCCGATAACACACTCTTTC AAATTCTGGAGGCTGTCTATTCGCACACAACCACGGCTCTATCGGAAACA CCGGAAAATATATTCAACCTAACGAAGACAAGTCAGACAAGGTGGTCCAG AATCTCGTCCTCTCTATAATCTATTTATGGACTATGTCATGCGGGTGTTC GATCCAATTTGTTAAATTAAAATACAGAATACGACCGGCTACATGCACAC GTGAGCAAAGAAGGTCTGGATATCAAGGTGATCATTATGTTAATTGGTCA GAATATGCTGACGATATTgaactttttcttgaaaatgttcGGGGTCTTGA AAAAGCCCTACATATTCTCCATTCATTATTCGACAAATTTGGATTGCACA TCAATATTAAAAAGACTAAAACaatgatttttaatttcaaatatatCGAA AAAGACTTTGATTCTGTCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNATGTCAAGGTGTTCAGGTATCTT GGTGATGAAGTAAAATACGACGAGCCGTCTACGGGAGATGCCGAGATTGA CCTACGAATCAATATCGCACAAGCCAAGTTTTGCGAAATTATAAAGAAGC TTACAAACTTTAAGATCCATCTAAGCACAAGATGATCTTCAACTCGCTTG TTAGCTCGCCAACAAAATAATTCGCTGACAAAGAGACTTTTGTTTAATga caacaaaagaacaaaacaagGTCGTGCAATGGAGTCACTCGAGGACAAAG TTATAAAGAAGCTTAATGTCACTAAAGATCGATTTTATAAAGATGCTTTG AAGAAGAAAGGGGGACATGATCATACAAACGTTGATCGCCGACTGTCGTC GCAATGATGATCCGGCTAAAGCTGTAAGtacaagtaagtaagtattcGCG ATTAAAATCGATAAAGGAAAATTGGAACATGGGTTCCAACATCATAGAGT TTAGTCTCGATTATCCTATCTTAAATCGTACGGAGATTTTATGAAATGAA ATCAACTTTGATTATGTTTATGATAttagagtctgctaaatcatGCGCCT TGCGTGCCCCATACTTTGAAAACGCCCACGCGCCTCGCGCGCCTTCTTTT TTCACGTACCTTATATTCTTCACGCGCGTTAAAATTTTACACGCGCTCTA AGATTTCACGCGCCTTGCATTTTTCATGTTATTATTCTGTCTTAAACCGT ACCCCCGGAAATACTTTCTGTATGTCAtgcttttgattgttttttattat tattatgagaCCTGATTTTAATTCAGGGCTTTGTTTTTACGCTAAATGTA ACTAAATTGTGATGTCAGGTGgctttaaagaatattttcttacacATTCC TTTTGTCAGGCTTTTATTGATAAATGGTTGGTCTTTGATTTTTCGACCAA ATGACATCTAATTTTCAACTCAAGGTTTTGTTtactctaaatgaaaataa ttCGTGAAGTCAAATAAATCATTAAGGGATTTTTGCGAGTAGATGttttt aaaacagaaaaaaagttcTTTCGTATTAGTGCATGTTTGCGGGATTGACT GCAACGAATTAATTGTTTATTAGTTATCCTTCTTTTCTGGATGAACGGCG TGAGCTTTTTTTGaaggttgaaaaatttcaactttgtgCGCAAAGCAGCG CGTAGCCAATCAGCGAGGGGGTAAACATACTGACTtgctcttgttttgat tttctcttacgcgcaacttttttgtaattttcaatgGAAGTATAAAAGCG CTCAGCGACCAAAACGCTCGAGCTTTGTGCGTTGTTGGGCGACCAAAAAA GCTAAGTGGACCACGAgcttaaagattttttgtgttACCATGCCAGTCAA AGCATTATGTTTGTATATGATATCAATAGACGCCATCTGataaataagaa aatcaaatacgtgttttcttataagaacaaactctataagaacatgaggc ttcgatggcagAAATCTTAAGAGCaggttaagagcattttaaggctttgc ggtttctaaaagaaacaaaaatacttacaaatattcaaaatgaaactaaa ttgagaacatattaagaagatttttaggctttaaaataaaaaagttaaga acaattttagaagTTCTAATATaacaaaaaacgtgtaatgacGTCAATGC TAGATTGCATGGccctttcttttttcttttcttatgagagtttttcgaat tttttttgtggatatttatttttaataaggaaaatatttttgttaaataa CTTATTCATGAATTATTTATCATTTATTATGAGTTTATAACGTGTTTCCT TGATTAAAAATGAATCAATAAATAAAACTGGATCCAGAATGAATATTAGC TGAGAGGTCATAAATATCATACTCTCACTGAGTAGGCCCTGATGGGATTT TTCATTATGTGATGTAAGTTTTGgttagagagtatggatctccagactaa aTGAATATAGACCATGGAAGAAAACNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagatccacccctaa attcggttaaaactgcttaaaaagagggaaaaattgtagtttctcgtcat ttttttccaaactgaggctggggatgttcttaagatgttcttaatttttc gacgaatttcagcctatatgttcttataaactaggttctaataaaaaaaa aacgtgtattcgttCAGTCCAAAAGATAACGCTAGAATAATTAGTTTTCA CAAGTAATTTATAAGTAAGTATAATTAGTCTTTCTCTCAGTGGTATCTAT GTATTGAAatgtaatctttaaaaaatggcGAAGTTTCTAGATATCTAATT ATTAAGTCTGTACTCATTTTAGGAAGAGCAAAGTTAATGTTTATGTCCAT TGAGctctttcagaaaattttttgttgagAATATATTAGATATTTTGTCC AAAGGGTAGTGAAAAACCTGCAAAAAATGCCATGTTTTGGGGTAAACCTG CTCTGTTTAGGGGTAGATTTAAATGTTCGGGAGATCAACTGATGATTGTC CGGGGGTGAGATCTGTTGTCCGGGggatcaaaatttccaaaaattgttat agtatcctccaccccccttagcgggacaaatttgaccaattttgaccaaa tcagAGGgccaaaaagttgaaattttcctaattttcggacccttactggg actgaaatttggatttctgatttttctgactcttagcgggactttggaag tccaaaaaaggtacccttaaaaGCGGCACATactgtaccctccatttgcc taagccccccccccccgggtaatgCCCACCCTAGTCATAGTCTAGGGAAC TAAACTTCTTAAACGCTTTTCTCTGACAAACATTTTTCGTAATATTTCCC CATAAGACACCTATCATTGCATGGCTTTCCAATTATATTTTATACGGGAA ACGGTCATTCCATAAATCATCATATTAATTTCTACATCATTTTGATCGGg gattatttttcaaatgaCTTCACACCTCAGTATTGATAGCTTTGATATTG TTCCATATAAATgacaattttcactttttcattgaATTGACTAGAAAGCA AAGGAAACAAAAATGAGTTGGTTATATAGGTCTTGGTCCAAGAGTATAAT ATTCCTCCTTATACAAttaatgttacttgttatcaaCGAAACAAAAGCGA GGGAAACATATTGTCTTCAAAAGACAAGGCTAACTGTCTTTACTGATGCG GAAATTTTGTTTGCTGACTCTTGGAGTAATAGATNTCAAAAGACAAGGAT GACCGTCTTTATTGATGCGGAAATTTTGTTTGCCGACACTACTTTTCATA TAAATGAATACCCTTTCTTTGTGTCGGTTATAAAAACTGTTTTACGAGAT CAATGTTACGAAGGAAGACTGTACGACCAGGCTAACCGTAAATTCATCGA GATCAATGATGTTGAAGATATTCGATCGGACttcgagaaaatttcaaaca attttcgaCCCATCAAAAGAGATGAAATGTACAGTTTCGTTGACGAATTC TACGGTGAAATAAATAATACTAATAATTCAAGAGAAATtatcttttattt atacgaTGACTACTACATCTACTTCACGCTACATTCTTATATGGAGTTGA AAGTGTTTTCCGAAAATCCAAAGGTTTCTATTATCATCGGATGCTTGACT GCCGCAAGAAGCTACACCAGTTACAAGTTTATTGATCGTTTTCCTGAGCT TGCCTGGTTACCAGTTCATCGTTTCATTCTCATCACTAACGCACAAAATC TTTTCCTTCGGTACACGCAAAATGACACATCTAACCGAGAACATAATGGT GTTCCTATTTGCTTCCAAAGTATTTTAGGATTGCTTAGAAATCCGAACTT CAATCGATTTGAATATCACTCAAACACGCTTCTACCAGACACGCATTTTC CAAAGACAATTCAAAATTTAACTATATATTTTCAATCAAACCTGGGAAGT GATGCGCTTCCCTTGATAAAGGAAGACACAGATGCACTTCTTCAACTGAT GGTTTTTCTGAAGAAGAAATTATTGCAACTCGATGGTACAAAGTTTTTTG TCGTGATGAAAGGAGATGAAAATGCATCAATGATGCTTTTGTATCAAAAA CTTGGCTTTGAAGTCATCCAGGATCAGGTAATTTCAGACCGAGATTTACC GGATTTAAAGTTCGACTCCTTGAACGATATCGATTATTCTGATAGCTTAA TCACCGTTTATCCAGAAGATCTTTTAACAGACAAATCTTTAAAACTCTGG ATGAAAGCAATTATCAACACGGTTGAATCGCATCCACGAAAAGgtgaaat gaaaataacaaaaataattgaataatttttgaacaaaactttAACGTTTC GGATattaatttaaattaatttgaatAATGGAGGATTTCTCATGACGCAG AACAAACGTACAAAGTGAATTACAATATTTCGTTTAGCACAGTCAATTTG TCAGTTTTCTTTTGCCGGAAAATGCTCTTTAAATGTTCTCTTTCTTAATC ATATTGTGAGTATTTGTGTTATTTCCTATGTAAATG

Coding sequence (CDS) from alignment at scaffold_117:285158..294893+

>TCONS_00046773 ID=TCONS_00046773|Name=TCONS_00046773|organism=Clytia hemisphaerica|type=CDS|length=1104bp|location=Sequence derived from alignment at scaffold_117:285158..294893+ (Clytia hemisphaerica)
GACAAATTTAACCGAGAACATAATGGTGTTCCTATTTGCTTCCAAAGTAT
TTTAGGATTGCTTAGAAATCCGAACTTCAATCGATTTGAATATCACTCAA
ACACGCTTCTACCAGACACGCATTTTCCAAAGACAATTCAAAATTTAACT
ATATATTTTCAATCAAACCTGGGAAGTGATGCGCTTCCCTTGATAAAGGA
AGACACAGATGCACTTCTTCAACTGATGGTTTTTCTGAAGAAGAAATTAT
TGCAACTCGATGGTACAAAGTTTTTTGTCGTGATGAAAGGAGATGAAAAT
GCATCAATGATGCTTTTGTATCAAAAACTTGGCTTTGAAGTCATCCAGGA
TCAGGTAATTTCAGACCGAGATTTACCGGATTTAAAGTTCGACTCCTTGA
ACGATATCGATTATTCTGATAGCTTAATCACCGTTTATCCAGAAGATCTT
TTAACAGACAAATCTTTAAAACTCTGGATGAAAGCAATTATCAACACGGT
TGAATCGCATCCACGAAAAGgtgaaatgaaaataacaaaaataattgaat
aaGACAAATTTAACCGAGAACATAATGGTGTTCCTATTTGCTTCCAAAGT
ATTTTAGGATTGCTTAGAAATCCGAACTTCAATCGATTTGAATATCACTC
AAACACGCTTCTACCAGACACGCATTTTCCAAAGACAATTCAAAATTTAA
CTATATATTTTCAATCAAACCTGGGAAGTGATGCGCTTCCCTTGATAAAG
GAAGACACAGATGCACTTCTTCAACTGATGGTTTTTCTGAAGAAGAAATT
ATTGCAACTCGATGGTACAAAGTTTTTTGTCGTGATGAAAGGAGATGAAA
ATGCATCAATGATGCTTTTGTATCAAAAACTTGGCTTTGAAGTCATCCAG
GATCAGGTAATTTCAGACCGAGATTTACCGGATTTAAAGTTCGACTCCTT
GAACGATATCGATTATTCTGATAGCTTAATCACCGTTTATCCAGAAGATC
TTTTAACAGACAAATCTTTAAAACTCTGGATGAAAGCAATTATCAACACG
GTTGAATCGCATCCACGAAAAGgtgaaatgaaaataacaaaaataattga
ataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029849XLOC_029849Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046773-proteinTCONS_00046773-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046773-exon-scaffold_117-1491911889:285158..285176TCONS_00046773-exon-scaffold_117-1491911889:285158..285176Clytia hemisphaericaexon
TCONS_00046773-exon-scaffold_117-1510915933:285158..285176TCONS_00046773-exon-scaffold_117-1510915933:285158..285176Clytia hemisphaericaexon
TCONS_00046773-exon-scaffold_117-1575043694:285158..285176TCONS_00046773-exon-scaffold_117-1575043694:285158..285176Clytia hemisphaericaexon
TCONS_00046773-exon-scaffold_117-1491911889:294150..294893TCONS_00046773-exon-scaffold_117-1491911889:294150..294893Clytia hemisphaericaexon
TCONS_00046773-exon-scaffold_117-1510915933:294150..294893TCONS_00046773-exon-scaffold_117-1510915933:294150..294893Clytia hemisphaericaexon
TCONS_00046773-exon-scaffold_117-1575043694:294150..294893TCONS_00046773-exon-scaffold_117-1575043694:294150..294893Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:285158..294893 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.400113 0.449791 0.478894 0.256712 3.09285 1.81233 2.49236 2.37054 1.89563 1.38449 0.605726 1.34553 3.46606 2.67682 2.02827 2.11545 0.384592 0.742289 1.22469 1.33424 0.960931 0.434545 0.25435 0.810565 0.481293 1.87387 0.221218 0.0937138 0.255828 0.408445
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046773 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top