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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046930 ID=TCONS_00046930|Name=TCONS_00046930|organism=Clytia hemisphaerica|type=transcript|length=4028bp
GAAACATTTTGATAATTATTCAAGAACCATTCGCTTctttttgaagaaga
agaagaaggaagaagagaaaaagaaaacagaagaTTAACATTGGAAATAA
AATGTTGTCGACGATAAGTTTTTGAGAGCAGTCGTTATTGGAGGCactaa
aaataacttttttttcagcCAAGACCAAAGGAAAAAGACCGTCGTTGATG
TTTGAGAAAACTCAACAGATACATACAGATCATATCAAACTCGCAAAGTT
GTGAAAAAGAAGTCAAGAGCTTTCTCTTTTTTTGATTAAGTTTCGTGGGA
ATGAAAAAGAGAATGGATGCAATGGTCCAACAACATTGAACAAACAGTGA
GAAGGGCGtcctttttaaaagaaaaaacgcCACGGGTGGTTATtgatttt
caatcttttttaatgAAGAAGTTGAACGCACGAAAAAGAATCAATCAGTt
tataaatttagaaaaactCACTTCATTTTCTATATATTGATTGCTTTGGA
ATGACACTGTTAAAGTTGAAAGAGAGAATTCTGTTGGAATTGACCTTACg
aaattttggaatttgttGATCAGTCagaaacttatttttcattatGGGCA
AGAAGCATATTCAAATGTTCATTCGACATCTTTACATGATGTGCATTTGG
TATGTCAAATTAACAATCCTTATTCATTATTGTCAAAGCGTGAATAGCAG
TATGATCGGAAGTTTGGATCAAATGTTTAAGGTGGAgaaattcgaacaaa
tttacacaaaaaaacgcaaagaaattttccaaatgAAGGAAGTTAAAGTT
GGTGAATTATCGCAAAAATATGGGTCAGACTTACGCGCGTTTTTACTGTC
CCACATTAATGAACTCATGGAAATCAAGAGAACTTCACAATTTCTTGAAC
AGAAGTACACGTATGATCCCCTTTTGAAACCCTTTTATCAGTTCAACGAT
AAAGACCCGAATCCTGACCGCTTGGAGATCAGTTATTCAACAGAATTCAA
TGTTAACATCAATAACAGTTTTGTGCAAGTACCAACTGAAATCTTTCGTA
ACCATACTACCATTTTGAATGAGATAAATTGGTCCAAAGGTTTAGATGAA
GTATTCAGAAGAAATTACGAACGTAATCCAACGTTACAATGGCAATATAT
CGGTAAAGAGACAGGGGTGATGCGAACATATCCAGGTGTAAACTCGAACC
GGAAGATCGATTTATACGACTGCAGACGTCGATTATGGTACAACCAAGCC
ATCAATTCTCCCAAAGATGTTGTCATTCTAATGGACATGTCCGGATCAAT
GACTGGTGCCCAtttcaaaatctcaaaactgaTCGTCCAATCACTGCTCG
ATACTTTACAACAAGATGACTTTTTCAACGTTCTCTACTTCAATCAAGCA
ACAGGCTTTCTTATCGATTGTTTAAATGACACACTAGCCCAAGCGACCTC
TTACAATAAGAATCAATTCAAACAAGCAGTAACCAGGCTACAATCACCGA
AATCAGTTGCCAATTTCCCTACAGCACTGAAGAAAGCTTTTCGCTTGATT
AACAAGGTTTCGACACACCGAGCGACGTCTTCATCGAGCTGCAACAAAGT
CATCATGCTCATCTCAGACggtattgattttgatgaacacaCACATGAAA
TATTGGACGATGAGAATGCAGAGAAAGAAGTCGTTATCTTCTCTTACATC
GTTGGTCAGTCTACCGATGAAGGACGGGCGGAGATGAAAGATATTGCATG
CCAGAGTGGCGGTGAACATTATGATTTCCCAACCGTCGGCAATGTCTTAG
ACGGAGTGCTAAAGTACCAAAAACGTTTAAGTCAACCGCTGGGCCAAAGT
TTGGATGATCACGTGATTTTCACACCTTTATATCTCGATGGATCGGGGTT
GGGGATGATGACCACTATATCCACAGCTGTATTCAGCAACAAAAATGATA
GCGATACCCGAGAGCTGATTGGTGTAGCTGGAATGGATATTGTTGTCTCG
TTGCTACAACAACAATACCCTGTCCAAAAGATGGGCGTTTTCGGACATGC
TTTTGCGATCAACAATAATGGTTTGTTTTTAATGCATCCCAAGTTTAAAG
ACCAGTCAGGTTATTTGCCTGACCCAGCCACCGTTTATTTGGACGAAGTT
GAATTTACTACCAATCCATCAAAAGGAATCGAGTTAAAACGAGCTATGAT
CAACAATGAGACGGGATGTATGAATGCCGAAGCTGATTGGCTGTTTCCTA
AGCATTCCAGTCAACGAGTGGTCCGTTTAAACAATACCTATTGTTATCGA
CCAATGGAAAAGACTCCTTTCTTCGCAGGTGTTTCTATGCCACAACAAAA
CGCTATACAGATGGTGGCTGATAAAACGAAAGCTCATTTATTCCGTCGAT
CAGGTATCAATGCGTTACATTCTGATGATCCGAATGTCATCATTGAAGTT
GCTGAATGGTCTTTTTGTGACATTCGAACGGAAGGTGAAAAGAAACAACC
CGCTTCCATCAAGTATTATCCAACAGCTGAAGACTTGTATCAGTACTTGA
AAAACAATGATGAAGATCTAGACGAAAAATGTGACGAGGAGATGTTGTTA
ACTTTACTTCTATCAGCATCAGTGGTCGCAAACTTCACCAGAGATCACTG
GTCTGTTGAAGAGCTCACTCATAACAACATCACTGACGCTTATATTATCA
CCTCTTCCGGTTTCACCTACATCTTATCGACAGATGTCAACAATACTAAA
CGATTGGATCGAGACATCTTTGAAGAGATTCGATTCACACATCCCGCATC
ATTCTaccaaaaagaatttcataatCAGCTGACTTTCAGCGTCGACATCA
AATCAGGAAAACCACAGAATCTCCATGATAAAGAGGTCTTCAATAACGAG
GAGATTGGGAATATAGCGATTGGTAAATCAGTTTACACGGGAGATGAAAA
TACGATGCTTGGAGTCGTCGGAATGTCAGTCCGAGTGGATTTTATGAATA
GAATCATGCACGAGGCTGCACAAAATATCACTGATTCTGATTGCAGTAAA
AATTCATCACAAAAATGTTACTTAATTGATGAAAATGGGTATATTGTTGC
TACAAATAGACCAGTTAATCGGGTCGGTTATTTTCTTGGTTGGTATGAAG
GCCAACTCATCGAGGACatggaaaaaagagaaattttggAAGTGCGAGAA
TACAACGATACACAAGCAGAATGTCCACAACAATCGGATACTTCATCCTC
CTCTCCAGCTAATATCTTGAAAACATTTTACTACACTGTCTTTCAGTTAG
TATACAACGTGTTGGCACATACATTAGCAATCACGTGGTGGATGTTGACT
AGCCTACTGACCGTCAGTATGAACGCTATTGGGGTTTCAGCGGCTAGTAG
AAATGTCAGTTGTACCAAAACTATCGAAATCTATTTACTTAAAAACAGAA
GTATTGATACAGAGGGAGCTTTTAATTGCTCCTCTAATTGCAGTCAAAAA
TATATCATCCAAAGTATTCCAGATACTAACTTAGCTCAGGTCATAATAAA
TAACAATTGCCGTGGGGCTGACGAATgtccattattttcaaaaaacaatg
agcCGAAACGGACAAGGGATCTCACTGTATGTGAGCAGCCTCTTCGCTAT
CGAAGGGCTTTGTCAGTTTGTTATAAATTGACTGGAGAAGACAAACGAGC
GTGTTTTGATGTTAATGAGAACAAAGAATCGAACATTATCATTTATCTTA
TCGTATTCATTTCCATCTGTTTTGCAATCATTATAGCGATTAGTTTTAAT
ATGTATTTTCGTAAATATTTTCATGGCAGGTGTATGTAAGATATCTAGAT
AATTCTTAATTCTTGTgccaattcttaaaaaaatggaaaggGAATGTTGC
TTTCCTTAAGCATTGGACCAATGCTTAAGTAAGATTTTAGACATTAAAGG
TAAAATACTCGGCGCACAGATATGGCATGGGAGAGTGAAGGAAAGAGATA
AATATTTGTAGGGGTCTGGACACACCGG Run BLAST on NCBI transcript from alignment at scaffold_118:250863..258533- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046930 ID=TCONS_00046930|Name=TCONS_00046930|organism=Clytia hemisphaerica|type=transcript|length=7671bp|location=Sequence derived from alignment at scaffold_118:250863..258533- (Clytia hemisphaerica)
GAAACATTTTGATAATTATTCAAGAACCATTCGCTTCTTTTTGAAGAAGA
AGAAGAAGGAAGAAGAGAAAAAGAAAACAGAAGATTAACATTGGAAATAA
AATGTTGTCGACGATAAGTTTTTGAGAGCAGTCGTTATTGGAGGCACTAA
AAATAACTTTTTTTTCAGCCAAGACCAAAGGAAAAAGACCGTCGTTGATG
TTTGAGAAAACTCAACAGATACATACAGATCATATCAAACTCGCAAAGTT
GTGAAAAAGAAGTCAAGAGCTTTCTCTTTTTTTGATTAAGTTTCGTGGGA
ATGAAAAAGAGAATGGATGCAATGGTCCAACAACATTGAACAAACAGTGA
GAAGGGCGTCCTTTTTAAAAGAAAAAACGCCACGGGTGGTTATTGATTTT
CAATCTTTTTTAATGAAGAAGTTGAACGCACGAAAAAGAATCAATCAGTT
TATAAATTTAGAAAAACTCACTTCATTTTCTATATATTGATTGCTTTGGA
ATGACACTGTTAAAGTTGAAAGAGAGAATTCTGTTGGAATTGACCTTACG
AAATTTTGGAATTTGTTGATCAGTCAGAAACTTATTTTTCATTATGGGCA
AGAAGCATATTCAAATGTTCATTCGACATCTTTACATGATGTGCATTTGG
TATGTCAAATTAACAATCCTTATTCATTATTGTCAAAGCGTGAATAGCAG
TATGATCGGAAGTTTGGATCAAATGTTTAAGGTGGAGAAATTCGAACAAA
TTTACACAAAAAAACGCAAAGAAATTTTCCAAATGAAGGAAGTTAAAGTT
GGTGAATTATCGCAAAAATATGGGTCAGACTTACGCGCGTTTTTACTGTC
CCACATTAATGAACTCATGGAAATCAAGAGAACTTCACAATTTCTTGAAC
AGAAGTACACGTATGATCCCCTTTTGAAACCCTTTTATCAGTTCAACGAT
AAAGACCCGAATCCTGACCGCTTGGAGATCAGTTATTCAACAGAATTCAA
TGTTAACATCAATAACAGTTTTGTGCAAGTACCAACTGAAATCTTTCGTA
ACCATACTACCATTTTGAATGAGATAAATTGGTCCAAAGGTTTAGATGAA
GTATTCAGAAGAAATTACGAACGTAATCCAACGTTACAATGGCAATATAT
CGGTAAAGAGACAGGGGTGATGCGAACATATCCAGGTGTAAAGTAAGTAA
GATTTTGGGTTGATCGAGTCACTGCTAAGTCCTTCAATCCAGAAATTATA
TTTCAAATGGTTGAGCATTTACAATTTTTTCTTTCCTGTAGTAACCTTTA
TTTGATCTTTGACGCTCATAGAAGGAATTTATTGGGGAAGGTGGATTCCA
TATCAACATGGAACACAGGTTTCTTTTGCCCTTTGTGCAATTCATTTCCT
TCTTGCTAAGTTCTACAGTGAGAGTCGCACATAGACTACAAAGTCAATAA
CCAAGATATGACTGCTGGCAATGATGATATACCAAGCAGAAAATTTATAG
TGAATTTTTGAGAGCGATAACGCTGCTTTCAAATTTATAAACTTTAAAGA
CAGTTAGTGTGAAGTTTTATTCTGCGAACTCGTCATTTTTACACCTTATT
TCTTTTATAAAAAATTTAAGACCTAAAATTTTCTATTTAGACTGTTTCAG
CACATATTGTGACATAATAGACAAAATATTCTAGAAGGTCTTTCTCATGA
ATTATATACAAACTACACAGATTTTATTCGTTGAAAAAGATCGAAGAAGT
TAGAAAAGGAATATTAATTTTTAAGATAGGACACCCTTAACATATGGTAG
GGATATCGTGTAAGAAATAAGAAAATTTCGAAAGATTTGAAATAATTAGA
CACTCTAAATAGTTACAGTGAAGTCTCGATAACTCGAACACATATGGAGA
ACGTGTTCGACTTAAACAATATTTGAGGTTGTTAGCAGAAGAGGCAGTAA
TATTTGTTCATGTAAAGAAAACATCCCAGCTACAAAGATTCTAACTGTAT
GTTGAAACTTCGCGAAACTTTCATTGCAACAATTCTACCACTGTCCTATG
TTTTAGCACTTGTCTTTTTCCACGGTTAAAGAACAAAGGCACAGTATATA
AAGAGAAATTTGATTTTTTATTACAGAACGATGTTTAGGAGTCAGGGTTT
TTTTCTGTTATAAAAATCGTTTATCACAATCAGTTTATTTATCTATTTAT
TTGAAAATATTAGAACGACATAAAATCATGGCTGCGATTTCAATCTTGAT
TGATGAAAGTAGATTGTGTTCCTGTTCAGTACAAATGAAATATCTTATTT
TTTCCCTTCAAAATTTTCCTCCATGTTCTTAAAGAAGATAGATGTTCCAT
TGAGGTTTGGGACCTAAAATACATTTTGAAATTGCAATGGTCTTTTTCTT
TTTCCCATAAATTAGATTTGCTTTTTTTGCGAGAAAGGTTAACTTGGTTT
GAAGAATGTTGTTTCTTACTTTTCTTTAAGGATGAGAACATTCCCTTTTT
AAGACTTAGTTTTTGCAATGAAGTATATAATTTTCAAAATTCTTTATAAA
ATATGAGGCGATATTTGTTTAGCATGAAAGCCCGAGGAAAACGTTTGTGA
TGAATGGTTACAGGTTATTAGGGCTAAGATAACAAAAAATATTTATTAAA
ATAAAACAGAAAGATTTGTATGAAAAGAGGAAAATGAAAATGGAAAAGTC
TAGATTGCCAACAAAACAACAACTTTGATTTAGTTGGTGGTGAACGTTTG
GAAAAGATCAAATCCACCATCATGGAAAAACGTTTGATAATCTTTCTGTA
TTGGATTTTGACAAGATTTACAGTGAATATGGAATGCAGTACTGAAGACC
TTGTAAAGAACACCTTTCAAATCGTAAAACACCACGCATACCAAAATACT
ATACAAAATACATTAACGAAAGGGTTAGTGATAGAACAGTCCATTGATTT
GGAAAATATCAGTGTATCATTTGAAAGTGATTTACGCGCATTACTGATGC
CACGAACCAAACTACTAAACAATATCAAATATAAAGCTAGAGAGCTGATA
GACAATTACAAATGTGACGAAAATATAGAAAATTTCAACTACTTCAACCG
AAGATATCTACCTCCGAACCCTGTACAAATCCATCCACAATTTTCAGAAG
AAGTTCCTGTTGCCATCAATCGCAGTCATGTTCAATGTTCGACTGAGATC
TTTCAAGGGTCCAAAGTTGTTTTGAACATCGCCAAAGCGACCGAAAAGCT
AGATGAAGTTTACCGCACAAATTACGCTCAAGAGCCAACCCTTTTGTGGC
AGTTCTTTTGTAGCACAATAGGCACACATCGGGCTTTTCCTGGTAAAAAG
TATGTAGTTTTGCCGGTGTATGGAAATGATCTTTATTAGGAATGGATATT
TGCAAACGAGTCTCTCTGTTTTTTTTGTATCTGCTTCCTTACTCTTTGTC
CAACATTTTATGACGTTCCTGTTTTTAATGGCACGAATAAATCGATCCAT
TAAGCTTCACTGTGGAAATTAAAGCAATGACATTTCTTCTTCATATCATC
CAGGGGATTAGATCTAATTATTTGAAGAGGGGATTATTGCCAATATCGGG
GATAAATTCATCAAAATTTACATCCACAAGTTTTCAGAGTACTACACTCA
TCTTTTCATTGTCATGTTAATCTAATATACACATTAGTGCCAATTTTATC
CAATAATATCGATCGAAACAACAATAAAGTGAAAACGTGTAAAGAAAGAA
ACAAAAGAGTTCTATTAATTGAACAGATAAATTGGGATTTGTTGCATTGG
ATCTTGAGGTCTGAAAACAAAACAATATTTTCATTTCTAAACATAAGGCG
AAATACCATGAGTGAGGATCGAATGAATGGTACGAAGCACATTTATAAAA
ATTAAAGATCTTGAGGTCTGAAACACAGAACAATATTTTCATTTCTAAAC
ATAAGGCGAAATACCATGAGTAAGGATCGAGTGAATGTTATGTTACGAAG
CACAATTAGAGAGAATAATCTAAAGAAAGTCTGTTCCCTAATACAAAAAT
GAACCGTATCATATTTTCTTTATTGATAGCTCGAACCGGAAGATCGATTT
ATACGACTGCAGACGTCGATTATGGTACAACCAAGCCATCAATTCTCCCA
AAGATGTTGTCATTCTAATGGACATGTCCGGATCAATGACTGGTGCCCAT
TTCAAAATCTCAAAACTGATCGTCCAATCACTGCTCGATACTTTACAACA
AGATGACTTTTTCAACGTTCTCTACTTCAATCAAGCAACAGGCTTTCTTA
TCGATTGTTTAAATGACACACTAGCCCAAGCGACCTCTTACAATAAGAAT
CAATTCAAACAAGCAGTAACCAGGCTACAATCACCGAAATCAGTTGCCAA
TTTCCCTACAGCACTGAAGAAAGCTTTTCGCTTGATTAACAAGGTAGATA
ATGAAACAAACAAACGAATATGTTTTGAAACCTGAATGTAATTGAGCAAA
TTTTTAACAGAAAGCAATCAAGGTATCCAAATGACTTAAACAGTGATGAA
ACAATGAAAACTGCAACGTGCCATATCAGGATATTCAAGTCATAATGTTT
TCTATTGAAACACCACGTTTTACCAGTAATGGCAAATTTAAGCTAGAGAG
AAATTGTTTAAAATTTGCCACTACTGACAAAAACCGGGGTGGTTGCCGTA
AAAATCAGAGATGTCAAAATATTTAAAACAGAAAGATTTCAAGTATTTTG
TAATGCAGTAATTGAAATCCACTGTTCGCTCCTATCTTGTTTTAGTGTGA
TCCTAATGCCTAATTTTGCCTCTATTTTCTACCGCAGGTTTCGACACACC
GAGCGACGTCTTCATCGAGCTGCAACAAAGTCATCATGCTCATCTCAGAC
GGTATTGATTTTGATGAACACACACATGAAATATTGGACGATGAGAATGC
AGAGAAAGAAGTCGTTATCTTCTCTTACATCGTTGGTCAGTCTACCGATG
AAGGACGGGCGGAGATGAAAGATATTGCATGCCAGAGTGGCGGTGAACAT
TATGATTTCCCAACCGTCGGTAAGTTCGTTTGCTTTCTCGTATCGTAGTG
AGTATATATTATCGTACCAGACTTGAGCTTGATTCCTTTGCATACGTAGC
TCTTTTAATAATTCTGAATCTTAAATGCCAATAATAAAGGCCCAACCATT
TATAAATTTATCAAAAATAAAGTTACAAAAACAAAAGTTTCTTATTTTGC
ACTGTGTAGCCCGATTTTAGTGCATATTTTTGTCATATCCAGGAGTACAG
CTTGTTAACTTCACACAATATATGTTGCTTCCTAGGTTTGTTTTTAACTA
AAAAATATCTCCATTGATTTAGTAAAAAAACATGATAATGATTATGATCA
AGTTACTCACTACGCATCTCTTTTTTAACAGGCAATGTCTTAGACGGAGT
GCTAAAGTACCAAAAACGTTTAAGTCAACCGCTGGGCCAAAGTTTGGATG
ATCACGTGATTTTCACACCTTTATATCTCGATGGATCGGGGTTGGGGATG
ATGACCACTATATCCACAGCTGTATTCAGCAACAAAAATGATAGCGATAC
CCGAGAGCTGATTGGTGTAGCTGGAATGGATATTGTTGTCTCGTTGCTAC
AACAACAATACCCTGTCCAAAAGATGGGCGTTTTCGGACATGCTTTTGCG
ATCAACAATAATGGTTTGTTTTTAATGCATCCCAAGTTTAAAGACCAGTC
AGGTTATTTGCCTGACCCAGCCACCGTTTATTTGGACGAAGTTGAATTTA
CTACCAATCCATCAAAAGGAATCGAGTTAAAACGAGCTATGATCAACAAT
GAGACGGGATGTATGAATGCCGAAGCTGATTGGCTGTTTCCTAAGCATTC
CAGTCAACGAGTGGTCCGTTTAAACAATACCTATTGTTATCGACCAATGG
AAAAGACTCCTTTCTTCGCAGGTGTTTCTATGCCACAACAAAACGCTATA
CAGATGGTGGCTGATAAAACGAAAGCTCATTTATTCCGTCGATCAGGTAT
CAATGCGTTACATTCTGATGATCCGAATGTCATCATTGAAGTTGCTGAAT
GGTCTTTTTGTGACATTCGAACGGAAGGTGAAAAGAAACAACCCGCTTCC
ATCAAGTATTATCCAACAGCTGAAGACTTGTATCAGTACTTGAAAAACAA
TGATGAAGATCTAGACGAAAAATGTGACGAGGAGATGTTGTTAACTTTAC
TTCTATCAGCATCAGTGGTCGCAAACTTCACCAGAGATCACTGGTCTGTT
GAAGAGCTCACTCATAACAACATCACTGACGCTTATATTATCACCTCTTC
CGGTTTCACCTACATCTTATCGACAGATGTCAACAATACTAAACGATTGG
ATCGAGACATCTTTGAAGAGATTCGATTCACACATCCCGCATCATTCTAC
CAAAAAGAATTTCATAATCAGCTGACTTTCAGCGTCGACATCAAATCAGG
AAAACCACAGAATCTCCATGATAAAGAGGTCTTCAATAACGAGGAGATTG
GGAATATAGCGATTGGTAAATCAGTTTACACGGGAGATGAAAATACGATG
CTTGGAGTCGTCGGAATGTCAGTCCGAGTGGATTTTATGAATAGAATCAT
GCACGAGGCTGCACAAAATATCACTGATTCTGATTGCAGTAAAAATTCAT
CACAAAAATGTTACTTAATTGATGAAAATGGGTATATTGTTGCTACAAAT
AGACCAGTTAATCGGGTCGGTTATTTTCTTGGTTGGTATGAAGGCCAACT
CATCGAGGACATGGAAAAAAGAGAAATTTTGGAAGTGCGAGAATACAACG
ATACACAAGCAGAATGTCCACAACAATCGGATACTTCATCCTCCTCTCCA
GCTAATATCTTGAAAACATTTTACTACACTGTCTTTCAGTTAGTATACAA
CGTGTTGGCACATACATTAGCAATCACGTGGTGGATGTTGACTAGCCTAC
TGACCGTCAGTATGAACGCTATTGGGGTTTCAGCGGCTAGTAGAAATGTC
AGTTGTACCAAAACTATCGAAATCTATTTACTTAAAAACAGAAGTATTGA
TACAGAGGGAGCTTTTAATTGCTCCTCTAATTGCAGTCAAAAATATATCA
TCCAAAGTATTCCAGATACTAACTTAGCTCAGGTCATAATAAATAACAAT
TGCCGTGGGGCTGACGAATGTCCATTATTTTCAAAAAACAATGAGCCGAA
ACGGACAAGGGATCTCACTGTATGTGAGCAGCCTCTTCGCTATCGAAGGG
CTTTGTCAGTTTGTTATAAATTGACTGGAGAAGACAAACGAGCGTGTTTT
GATGTTAATGAGAACAAAGAATCGAACATTATCATTTATCTTATCGTATT
CATTTCCATCTGTTTTGCAATCATTATAGCGATTAGTTTTAATATGTATT
TTCGTAAATATTTTCATGGCAGGTGTATGTAAGATATCTAGATAATTCTT
AATTCTTGTGCCAATTCTTAAAAAAATGGAAAGGGAATGTTGCTTTCCTT
AAGCATTGGACCAATGCTTAAGTAAGATTTTAGACATTAAAGGTAAAATA
CTCGGCGCACAGATATGGCATGGGAGAGTGAAGGAAAGAGATAAATATTT
GTAGGGGTCTGGACACACCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046930-exon-scaffold_118-1575043694:257342..258533 | TCONS_00046930-exon-scaffold_118-1575043694:257342..258533 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1575043694:254091..254454 | TCONS_00046930-exon-scaffold_118-1575043694:254091..254454 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1575043694:253465..253696 | TCONS_00046930-exon-scaffold_118-1575043694:253465..253696 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1575043694:250863..253102 | TCONS_00046930-exon-scaffold_118-1575043694:250863..253102 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1510915933:257342..258533 | TCONS_00046930-exon-scaffold_118-1510915933:257342..258533 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1510915933:254091..254454 | TCONS_00046930-exon-scaffold_118-1510915933:254091..254454 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1510915933:253465..253696 | TCONS_00046930-exon-scaffold_118-1510915933:253465..253696 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1510915933:250863..253102 | TCONS_00046930-exon-scaffold_118-1510915933:250863..253102 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1491911889:257342..258533 | TCONS_00046930-exon-scaffold_118-1491911889:257342..258533 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1491911889:254091..254454 | TCONS_00046930-exon-scaffold_118-1491911889:254091..254454 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1491911889:253465..253696 | TCONS_00046930-exon-scaffold_118-1491911889:253465..253696 | Clytia hemisphaerica | exon |
| TCONS_00046930-exon-scaffold_118-1491911889:250863..253102 | TCONS_00046930-exon-scaffold_118-1491911889:250863..253102 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_118 | supercontig | scaffold_118:250863..258533 - |
Blast
BLAST of TCONS_00046930 vs. Swiss-Prot (Human)
Match: CA2D3 (Voltage-dependent calcium channel subunit alpha-2/delta-3 OS=Homo sapiens GN=CACNA2D3 PE=1 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 1.536e-92 Identity = 280/1060 (26.42%), Postives = 489/1060 (46.13%), Query Frame = 3
Query: 678 YCQSVNSSMIGSLDQMFKVEK-FEQIYTKKRKEIFQMKEV-KVGELSQKYGSDLRAFLLSHINELM--EIKRTSQFLEQKYTYDPLLKPFYQFNDKDPNPDRLEISYSTEFNVNINNSFVQVPTEIFRNHTTILNEINWSKGLDEVFRRNYERNPTLQWQYIGKETGVMRTYPGVN---SNRKIDLYDCRRRLWYNQAINSPKDVVILMDMSGSMTGAHFKISKLIVQSLLDTLQQDDFFNVLYFNQATGFLIDCLNDTLAQATSYNKNQFKQAVTRLQSPKSVANFPTALKKAFRLINKVSTHRATSSSSCNKVIMLISDGIDFDEHTHEILDDENAEKEVVIFSYIVGQSTDEGRAEMKDIACQSGGEHYDFPTVGNVLDGVLKYQKRLSQPLGQSLDDHVIFTPLYLDGS-----------GLGMMTTISTAVFSNKNDSDTRE-LIGVAGMDIVVSLLQQQYPVQKMGVFGHAFAINNNGLFLMHPKFK-----DQSGYLPDPATVYLDEVEFTTNPSKGIELKRAMINNETGCMNAEADWLFPKHSSQRVVRLNNTYCYRPMEKTPFFAGVSMPQQNAIQMVADKTKAHLFRRSGINALHSDDPNVIIEVAEWSFCDIRTEGEKKQPASIKYYPTAEDLYQYLKNNDEDLDEKCDEEMXXXXXXSASVVANFTRDHWSVEELTHNNITD-----AYIITSSGFT----YILSTDVNNTKRL----DRDIFEEIRFTHPASFYQKEFHNQLTFSVDIKSGKPQNLHDKEVFNNEEIGNIAIGKSVYTGDENTMLGVVGMSVRVDFMNRIMHEAAQNIT--DSDCS---KNSSQKCYLIDENGYIVATNRPVNRVGYFLGWYEGQLIEDMEKREILEVREYNDTQAECPQQSDTSSSS-----PAN-ILKTFYYTVFQLVYNVLAHTLAITWWMLTSLLTVSMNAIGVSAASRNVSCTKTIEIYLLKNRSIDTEGAFNCSSNCSQKYIIQSIPDTNLAQVIINNNCRGADECPLFSKNNEPKRTRDLTVCE--QPLRYRRALSVCYKLTGED-KRAC 3704
Y + V I L + K+ K E+++ KK + + ++ E + L ++ +DL+ + N ++ E + FLE + +L P FN+ VNI+ S VQVPT ++ I+N + WS+ L++VF N++R+P+L WQY G G R YPG+ + +DCR R WY QA SPKDVVIL+D+SGSM G I+K V S+LDTL DDFFN++ +N+ ++ CLN TL QA NK F++ + +L + K + AL +AF +++ + S C++ IMLI+DG D + +++V IF+Y++G+ +K +AC + G T+ +V + V++Y LS+P + V++T Y+D + G +MTT++ VFS +N++ ++ L+GV G D+ V L + P K+G+ G+AFAI NNG L HP+ + + P+ ++V L EVE+ + L+ AM+N +TG + E K +RV+ + N Y Y ++ TPF GV++ + + + ++ G++ L D ++ EWS+C+ E + + + E + YLK + L +CD+E++ +L A VV+ +W+ L + +D A++ T +G + ++ + + N L +IF F ++ +S+ +G N + + + ++ ++ VG+ ++++F R A++ D CS + + CYLID NG+I+ + + G F G EG ++ + + D QA C ++S + P N L + + +LV ++ L +WW M A C ++ + +T G C +CS+ ++IQ IP +NL V+++++C P+ E + L CE + + RR C+ E+ R C
Sbjct: 73 YEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQ---YEYFNAVLINERDKDGNFLELGKEF--ILAPNDHFNN---------------LPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPGIKWEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLFA-KGIGMLDIALNEAFNILSDF--NHTGQGSICSQAIMLITDGA-VDTYDTIFAKYNWPDRKVRIFTYLIGREAAFAD-NLKWMACANKGFFTQISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLTDDQGPVLMTTVAMPVFSKQNETRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRRKPNYSSVDLSEVEWE---DRDDVLRNAMVNRKTGKFSMEVKKTVDK--GKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFF----RGNVTIEEGLHDLEHPDVSL---ADEWSYCNTDLHPEHRHLSQL------EAIKLYLKGKEPLL--QCDKELIQEVLFDA-VVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQDFLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGP---------VNKSNVVTASTSIQLLDERKSPVVAAVGIQMKLEFFQRKFWTASRQCASLDGKCSISCDDETVNCYLIDNNGFILVS-EDYTQTGDFFGEIEGAVMNKLLTMGSFKRITLYDYQAMCRANKESSDGAHGLLDPYNAFLSAVKWIMTELVLFLVEFNLC-SWWH------SDMTAKAQKLKQTLEPCDTEYPAFVSERTIKETTGNIAC-EDCSKSFVIQQIPSSNLFMVVVDSSCLCESVAPITMAPIEIRYNESLK-CERLKAQKIRRRPESCHGFHPEENAREC 1067
The following BLAST results are available for this feature:
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