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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046947 ID=TCONS_00046947|Name=TCONS_00046947|organism=Clytia hemisphaerica|type=transcript|length=917bp
TGAAATATTGACCGAACAGAAATGATTTGCAGGTCAGAGCGTGCAAGGGA
AGCAGTAAGGAATTCAACAGAGAAGTTAACACAAAGTCATATAAGGTAGA
AAAAAATCGTCGATTAGGAATTGGAATTTATCAAAAATGGGTATCATTTT
CGTGTCAATAGAAAGCAGATCGctcatcaaacatttcattatAAAATGgg
tttggaagaaaaaaattacaagtaGCAACTCGATTTATTTAGTTAGTTCA
GATGGACAATTGTTATTTCTACTCTAGAAAGAGGCAGGACTGATATCATC
TTTATAAGTAAATAATCGTGCAGAACAAAAANTCGCTAGTCATTAATGAA
ATCATTATGACGAACAGATGTCGAACAGCAGTGCTCACAACGAATCACCA
TTGACAAATATTTAATTCACCTCTCATCATTAATGCAATGTTACTAACTG
TCACGATTTATATACAAACGACAGTCTTAAAGTTTTCCAAAGTTGTTTAG
AGTTTTGTTATAAGGAAATTGAGGTTATGGCGTGTGTTTGGTTAGAATGA
TAAACAGGGAAATAGCGAAAAGTATAAATACGgacaaaataagaaataaa
tattCAGTGTCGATGTTAGGATAatgttaaaaaatctttaaaacgaAGGC
GAGCCCTGTTCAGAACACTACTTAAGAAAATCCTCTGGATACCTACAAGT
TTGAACAGTATTTTGAAGCACTTTttaccaaataagaaaatccaaaatta
taATACACcgtcttctcacagacccggtaggattttttcagctagtgggg
ataaaaataacggactgaaattcgatggagattgatattcccatatgtTT
TATTGCTGGGGatgtcaattcttttgttttttaagtcagataattcagtg
gggatggaaaaaataaN Run BLAST on NCBI transcript from alignment at scaffold_118:128745..129661 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046947 ID=TCONS_00046947|Name=TCONS_00046947|organism=Clytia hemisphaerica|type=transcript|length=917bp|location=Sequence derived from alignment at scaffold_118:128745..129661 (Clytia hemisphaerica)
Nttattttttccatccccactgaattatctgacttaaaaaacaaaagaat
tgacatCCCCAGCAATAAAacatatgggaatatcaatctccatcgaattt
cagtccgttatttttatccccactagctgaaaaaatcctaccgggtctgt
gagaagacgGTGTATtataattttggattttcttatttggtaaAAAGTGC
TTCAAAATACTGTTCAAACTTGTAGGTATCCAGAGGATTTTCTTAAGTAG
TGTTCTGAACAGGGCTCGCCTtcgttttaaagattttttaacatTATCCT
AACATCGACACTGaatatttatttcttattttgtcCGTATTTATACTTTT
CGCTATTTCCCTGTTTATCATTCTAACCAAACACACGCCATAACCTCAAT
TTCCTTATAACAAAACTCTAAACAACTTTGGAAAACTTTAAGACTGTCGT
TTGTATATAAATCGTGACAGTTAGTAACATTGCATTAATGATGAGAGGTG
AATTAAATATTTGTCAATGGTGATTCGTTGTGAGCACTGCTGTTCGACAT
CTGTTCGTCATAATGATTTCATTAATGACTAGCGANTTTTTGTTCTGCAC
GATTATTTACTTATAAAGATGATATCAGTCCTGCCTCTTTCTAGAGTAGA
AATAACAATTGTCCATCTGAACTAACTAAATAAATCGAGTTGCtacttgt
aatttttttcttccaaaccCATTTTataatgaaatgtttgatgagCGATC
TGCTTTCTATTGACACGAAAATGATACCCATTTTTGATAAATTCCAATTC
CTAATCGACGATTTTTTTCTACCTTATATGACTTTGTGTTAACTTCTCTG
TTGAATTCCTTACTGCTTCCCTTGCACGCTCTGACCTGCAAATCATTTCT
GTTCGGTCAATATTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046947-exon-scaffold_118-1491911889:128745..129661 | TCONS_00046947-exon-scaffold_118-1491911889:128745..129661 | Clytia hemisphaerica | exon |
| TCONS_00046947-exon-scaffold_118-1510915933:128745..129661 | TCONS_00046947-exon-scaffold_118-1510915933:128745..129661 | Clytia hemisphaerica | exon |
| TCONS_00046947-exon-scaffold_118-1575043694:128745..129661 | TCONS_00046947-exon-scaffold_118-1575043694:128745..129661 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_118 | supercontig | scaffold_118:128745..129661 . |
Blast
The following BLAST results are available for this feature:
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