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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046954 ID=TCONS_00046954|Name=TCONS_00046954|organism=Clytia hemisphaerica|type=transcript|length=940bp
CCCCTGGGACTATCAGTGACCTTTAGAAACactaaatttttgcgaaaaat
cacccttagagagattctTTTGACACTTTCATAGTTTTGGGAGAAATCCC
AACACAAGATTTATTTGACACTTTCAATGGTTTTCGTACCCTTAAAAGGA
CCCAAAATGGGAGAAATCCCAATCCTTcgagaaaatattttgactttttg
taacCCCTAGAAACCCCTGCAGAAAGTGGTATATTGGTATGCCATGATCC
TAAATGAAAGCctgaattgtttttgttaaatgaTGAGTTCTGATTTCTGA
TCTCCCTAAATTTATTATATGGCTGGATGTGTTCCAAAATCTAGGgacaa
ctttttttaaaactcTTTCAAATCGGGGGCAAAtttattatttcaaagaa
agatttattttgaacttttttcggGTTAAAGTGCGATGACTGCTAGATTT
TTGGTTCAGTATTTGTTAGACTTTGTCCGATAGAATTCGATTTTTCGGTT
ACGAAATTTggtcttttcaaactttttgccTGCAGACACTTGGAAAACTT
CATTATTTCCATGAACTTTTGCCGCGTTACTAACAAAGGACAAATCAGTT
TTAATTTGATTATACCCCCTATCGCCTTGAAAGATGTGTTCTAAAGCTTT
CTAGGGGTAACTAGAAGATATATgagatttttcttgattttactcccTGT
TTCATTAGAACACATCAATATTACCGGCCGATGGATTCACGGAACCTTAA
TCAGAATAGATTTTTAGCCAAAATAAACATGCAGAACACATTGCTGCGCT
CGCTATTACTTGCTAATACTAAGTTGTACCCTCATCATTATATCTAATCT
CAGAAATCAATACGATTTACACATTAATACAACAATATAGCTCAATCAAT
TTTGGATAGCTTATTGAAGactaaattgtttaaaaatcgg Run BLAST on NCBI transcript from alignment at scaffold_118:284685..285624 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046954 ID=TCONS_00046954|Name=TCONS_00046954|organism=Clytia hemisphaerica|type=transcript|length=940bp|location=Sequence derived from alignment at scaffold_118:284685..285624 (Clytia hemisphaerica)
ccgatttttaaacaatttagtCTTCAATAAGCTATCCAAAATTGATTGAG
CTATATTGTTGTATTAATGTGTAAATCGTATTGATTTCTGAGATTAGATA
TAATGATGAGGGTACAACTTAGTATTAGCAAGTAATAGCGAGCGCAGCAA
TGTGTTCTGCATGTTTATTTTGGCTAAAAATCTATTCTGATTAAGGTTCC
GTGAATCCATCGGCCGGTAATATTGATGTGTTCTAATGAAACAgggagta
aaatcaagaaaaatctcATATATCTTCTAGTTACCCCTAGAAAGCTTTAG
AACACATCTTTCAAGGCGATAGGGGGTATAATCAAATTAAAACTGATTTG
TCCTTTGTTAGTAACGCGGCAAAAGTTCATGGAAATAATGAAGTTTTCCA
AGTGTCTGCAggcaaaaagtttgaaaagaccAAATTTCGTAACCGAAAAA
TCGAATTCTATCGGACAAAGTCTAACAAATACTGAACCAAAAATCTAGCA
GTCATCGCACTTTAACccgaaaaaagttcaaaataaatctttctttgaaa
taataaaTTTGCCCCCGATTTGAAAgagttttaaaaaaagttgtcCCTAG
ATTTTGGAACACATCCAGCCATATAATAAATTTAGGGAGATCAGAAATCA
GAACTCAtcatttaacaaaaacaattcagGCTTTCATTTAGGATCATGGC
ATACCAATATACCACTTTCTGCAGGGGTTTCTAGGGgttacaaaaagtca
aaatattttctcgAAGGATTGGGATTTCTCCCATTTTGGGTCCTTTTAAG
GGTACGAAAACCATTGAAAGTGTCAAATAAATCTTGTGTTGGGATTTCTC
CCAAAACTATGAAAGTGTCAAAagaatctctctaagggtgatttttcgca
aaaatttagtGTTTCTAAAGGTCACTGATAGTCCCAGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046954-exon-scaffold_118-1491911889:284685..285624 | TCONS_00046954-exon-scaffold_118-1491911889:284685..285624 | Clytia hemisphaerica | exon |
| TCONS_00046954-exon-scaffold_118-1510915933:284685..285624 | TCONS_00046954-exon-scaffold_118-1510915933:284685..285624 | Clytia hemisphaerica | exon |
| TCONS_00046954-exon-scaffold_118-1575043694:284685..285624 | TCONS_00046954-exon-scaffold_118-1575043694:284685..285624 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_118 | supercontig | scaffold_118:284685..285624 . |
Blast
The following BLAST results are available for this feature:
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