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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046968 ID=TCONS_00046968|Name=TCONS_00046968|organism=Clytia hemisphaerica|type=transcript|length=259bp
aaacttaaaaaaaacaactagATATTTAAATTGTGAAGTTGAAATTTTAA
TTGTGAACGGAAACTTAAAATCGAGGATCAAAAAGTAATGTATACCTCCT
CCGAATAATTCATCATTAAAGTTGTCAGACGAATATTGTGTACTGTTATT
TAAATTCATCCAGTATGCAGAATTGCTCTTTATTTCATTACCAAAATTTG
GTTCAAGCGTGGTTGGAGAACTTTCATTGTCGACTTGTATAAAGGGGTCT
TCCCCTTCC Run BLAST on NCBI transcript from alignment at scaffold_119:95134..97114+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046968 ID=TCONS_00046968|Name=TCONS_00046968|organism=Clytia hemisphaerica|type=transcript|length=1981bp|location=Sequence derived from alignment at scaffold_119:95134..97114+ (Clytia hemisphaerica)
aaacttaaaaaaaacaactagATATTTAAATTGTGAAGTTGAAATTTTAA
TTGTGAACGGAAACTTAAAATCGAGGATCAAAAAGTAATGTATACCTCCT
CCGAATAATTCATCATTAAAGGTGTCAGACGAATATTGTATATCTTCATT
TTCGGTGAAGACTACTTGCATTGGTGACAATTCATGAGGagaatctaaaa
aagaaaaaagattgacTTAAACCATGATGTGCAACACTGCAATTATATAA
TTTATCTAGTTATTTCTTTCAGcctcaaaaatcgatgtttttattgattt
tcttaacgTCACTGCctctgaccccctccccctacactttgcgtcaattt
gacgttaggcGTGGGGAAACATCGATATGTGAATGGCccctaaataattc
aaattgcTTTTTCAACATCGGAAAGGTTCATTATAGATTGGGATCATTCA
AAAAGCAAGTACGCTTTCGTACGCTTTATGTGTACCCCCCTTCAGCGTGC
GCacgctttttagtacaccccCCCCCTAACCAAAGTCGAAACTTGAAACT
ATTGTAACAGTAGAACATGTAGGTATccaatcgtatttataacaaaatct
caagaaattaaaagaatctataagatgaaaaaaaataccaaaggaaaaat
gaaaaatgacaatcgcataaaaaattttttgatttgaaaatattgcgttt
ttctctcaaaaaagacagtttaggaaaaattacgagcGCAAACGTACTTC
TGCTCAATGACCCCTtctcccccttgtacgcttttGGGAGTGTACCCCCC
TTCCCCctctcgagcgtacgtactttttgaatggtcccatcGGCTTTAAG
GGCTCtaaccatagtgaatttttaatattttccgattcttaattactctt
aagggatttgattaaaaagcaatttataaaggcaattatttgttaaaagt
gttaagaacCTAAAGCATAACTTTCATGttgaaatattaaaatcaaCTTT
CCGACTATGTTCAGAGCCCTTAACTTGTAATTTTCGATTTAATCAGAAAT
AAGCTTTCGAATAGCTTGACATAAATGTAAAACATAAACTTGTCAAATAG
GTAAATTTGAGTACCTCCGCCGAAAATAGGCTGATTTTGGTCCGTGACAT
TTGAATGATGTTGGAAAACGTGTGAGCCGGTATCAATCTTATGATGAGGT
GATGTATTACCTTCTTGCTCCACTGGTTGTTTCTTAGGAACATCGCATGA
TTGTAATAATTCTAGAAAATGATTCGATATAGCATAAATATGTTTGAAAT
TAACGCCCCCTCcttacagacccggtgggatgaCCCCTCCCACTTGGACC
AAAATCtcatccccagtggaaaattgtactctaatttttgtccccgctga
aaacaatcaaataacGAAACcctcactgaaaaatatttatttcattcACA
ACTTGAATTTCAAATCCCCTGCCACAAAAAACATGGGAATGTTTCAGTCT
GTTGTTTACACCATTACTAGATGGAGAAAAAAACCTCTACCGGATCAGTA
GAGAATGGGTtgtagaatttttcagctctacAATTACAATTACTTGAAAA
TTTCTTGGTTGAAtcggaaaaattaaaatatcaaGACCAGCGATCGAGGT
Aatgaattgtgtcacttcgtagggcaaatttttaatattatatgctccta
atagggtatAGTATCgacaaaaaaacattgaaaaaactACTAGATATTTA
AAACTTGAAGTTGAAATTTTAATTGTGAACGGAAAATTAAAATCGAGGAT
CAAAAAGTTATGTATACCTCCTCCGAAAAATTTATCATTAAAGTTGTCAG
ACGAATATTGTGTACTGTTATTTAAATTCATCCAGTATGCAGAATTGCTC
TTTATTTCATTACCAAAATTTGGTTCAAGCGTGGTTGGAGAACTTTCATT
GTCGACTTGTATAAAGGGGTCTTCCCCTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046968-exon-scaffold_119-1491911889:95134..95254 | TCONS_00046968-exon-scaffold_119-1491911889:95134..95254 | Clytia hemisphaerica | exon |
| TCONS_00046968-exon-scaffold_119-1510915933:95134..95254 | TCONS_00046968-exon-scaffold_119-1510915933:95134..95254 | Clytia hemisphaerica | exon |
| TCONS_00046968-exon-scaffold_119-1575043694:95134..95254 | TCONS_00046968-exon-scaffold_119-1575043694:95134..95254 | Clytia hemisphaerica | exon |
| TCONS_00046968-exon-scaffold_119-1491911889:96977..97114 | TCONS_00046968-exon-scaffold_119-1491911889:96977..97114 | Clytia hemisphaerica | exon |
| TCONS_00046968-exon-scaffold_119-1510915933:96977..97114 | TCONS_00046968-exon-scaffold_119-1510915933:96977..97114 | Clytia hemisphaerica | exon |
| TCONS_00046968-exon-scaffold_119-1575043694:96977..97114 | TCONS_00046968-exon-scaffold_119-1575043694:96977..97114 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_119 | supercontig | scaffold_119:95134..97114 + |
Blast
The following BLAST results are available for this feature:
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