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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047151 ID=TCONS_00047151|Name=TCONS_00047151|organism=Clytia hemisphaerica|type=transcript|length=900bp
aattaatacTAGGTCACAGTTTGCTTCAGAGCAAACTGGTGCGACCGCTG
TTTTACAGAGCAATTAACACTTTCTTCAGCAGTCAACAGAACAACATTCA
TCACAAATCATGTATGATgcttcataaaaaatgaaaaacagcaCATGTAA
AATGCAATAACTAACAATGTCGAAAATACTTGCAGAGGACCGAGAGAAGT
TATAATTCAAAATTACTCCAGGAGTACATCTTAAAACAAAGACTACCTCT
GAAATCAAAACGCTTGCATCTTAGCTAACACGCTGAACTTTATAAGCCAC
CGTACCATCCACCCATACCTCTCTAGGCCACCGTACACGCGAGATATCTC
TTAGATATTTGCGTGGTTATCTCCCTAATATTCAGccaccaaaaatgaaa
attaaagatggtaactCAAGCTGcacgatttcactttcgatttcaacttT
CAACCTCCCAGACTCCGTAAACAAAAACACGACGGTAAAAAACCGCCTTC
AGGCGGTCGAAAAACGCATGAAATCAAAGTAAactttagaaacactcttg
aaagctaaaagaaagtaAAAGAGTAGTAATAGACAcaaagagacaggggt
gtgaaagatttgttttcaactcaaattaatgtttttttttcattcggaTA
TCATGATCGACACAAAtgattttcagtcggtcaaatggctttttcagtcg
gacattgaccgatgaccgaCGCTTATTTGCACCCCTGTGAGTGttcccag
aatactttcaaaagACTTCaggaccaaaagatttcaggaccctatttgaa
accatttatGAGTACTtatgagattttagcctgagaaaattataGACTTT
ATCTCTAAATATCACGTTTTAGTAGGAAATGCAGTACCATATTGGCGGAC Run BLAST on NCBI transcript from alignment at scaffold_122:20642..21541 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047151 ID=TCONS_00047151|Name=TCONS_00047151|organism=Clytia hemisphaerica|type=transcript|length=900bp|location=Sequence derived from alignment at scaffold_122:20642..21541 (Clytia hemisphaerica)
GTCCGCCAATATGGTACTGCATTTCCTACTAAAACGTGATATTTAGAGAT
AAAGTCtataattttctcaggctaaaatctcataAGTACTCataaatggt
ttcaaatagggtcctgaaatcttttggtcctGAAGTcttttgaaagtatt
ctgggaaCACTCACAGGGGTGCAAATAAGCGtcggtcatcggtcaatgtc
cgactgaaaaagccatttgaccgactgaaaatcaTTTGTGTCGATCATGA
TAtccgaatgaaaaaaaaacattaatttgagttgaaaacaaatctttcac
acccctgtctctttgTGTCTATTACTACTCTTTtactttcttttagcttt
caagagtgtttctaaagtTTACTTTGATTTCATGCGTTTTTCGACCGCCT
GAAGGCGGTTTTTTACCGTCGTGTTTTTGTTTACGGAGTCTGGGAGGTTG
AaagttgaaatcgaaagtgaaatcgtgCAGCTTGagttaccatctttaat
tttcatttttggtggCTGAATATTAGGGAGATAACCACGCAAATATCTAA
GAGATATCTCGCGTGTACGGTGGCCTAGAGAGGTATGGGTGGATGGTACG
GTGGCTTATAAAGTTCAGCGTGTTAGCTAAGATGCAAGCGTTTTGATTTC
AGAGGTAGTCTTTGTTTTAAGATGTACTCCTGGAGTAATTTTGAATTATA
ACTTCTCTCGGTCCTCTGCAAGTATTTTCGACATTGTTAGTTATTGCATT
TTACATGtgctgtttttcattttttatgaagcATCATACATGATTTGTGA
TGAATGTTGTTCTGTTGACTGCTGAAGAAAGTGTTAATTGCTCTGTAAAA
CAGCGGTCGCACCAGTTTGCTCTGAAGCAAACTGTGACCTAgtattaatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047151-exon-scaffold_122-1491911889:20642..21541 | TCONS_00047151-exon-scaffold_122-1491911889:20642..21541 | Clytia hemisphaerica | exon |
| TCONS_00047151-exon-scaffold_122-1510915933:20642..21541 | TCONS_00047151-exon-scaffold_122-1510915933:20642..21541 | Clytia hemisphaerica | exon |
| TCONS_00047151-exon-scaffold_122-1575043694:20642..21541 | TCONS_00047151-exon-scaffold_122-1575043694:20642..21541 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_122 | supercontig | scaffold_122:20642..21541 . |
Blast
The following BLAST results are available for this feature:
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