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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047153 ID=TCONS_00047153|Name=TCONS_00047153|organism=Clytia hemisphaerica|type=transcript|length=1241bp
catccccactgagaaaagcataaaaaattttggaatccCCACTCGATTTT
TTAGCTGTAAacaataatatttaaaatccccacccattaaagtattaaaa
tttttcatccccattggcatttggCTCCTTCAATTTATCCCTGCTGGGTG
AAAAGttctcaccgggtcactgagacaggggtgtgttgtAGTAACCCTTA
TGGCtcacacatacccagcacccattttgcctaagtactcccTCTGGGCT
TCACCCTTAACCCTTTGTTAATTTCTACATTATAGAAGAAATTTGCCTTC
CTGTAACAGTCTTGGCTTCCTCACAGTTGCGAAACACATCTGGACTCACT
TCTTACTTTTCAGTCTCTACCTTTTTATTTGTTCTGATATGGGATTCTTG
TTGTTCTAAAACGATCTTTTATTCAATggtttttacggcactttgctGCT
TTCTTTAGAAAATTTAGTTAGGGAAGTCATCCAGGATCTTGCAATTCTAT
CAGCCACTTACACTTGTAAACTCAAGTTTCTtatattttccatcaaaaac
aaccgAAAGCATTATACTACTTTTcaaagctggagaccaaaacaaattat
cttccacaATAAcagcgcccttttggatctattgttaagcccatctaaaa
tggtggacaaAGGGAAAAACAAAAGCGCTCGCTAGTTTGAAGGTGGTAAC
ACCGAAACTCCCAAAATGATCATCAAATAAAAGGAGAGTCAGTTGTGGCA
TAAGTTGCATAACGCATTCCACAGCAGCATGCAACAAGCAGTTATTGTGT
ACTTAACTTCAGTTGACTTTGAAGATGAAGGAGTGAAAGATGCAGGTTTA
TTTTGTTCAAATAGGTTTATTATACCTTTGCAGAATTCTTTTGAatctgc
ttatacttactatgttcgCTATATCGCCTAGGCAAAAAGTTCAGTAGAAA
AAGCAGCAAGTACTAAACGCCTACTACCTATAATACTTCCTACCTATGCT
TACTATTTActgtaaaatagctcaaaacAGCTCAAAACTACCGGGTGTTC
CAGAAGTTTTTCCCTGTTGTGCTTTAAGGTGTCTTTATATCAAATCTCCT
TTTGTATTCTTTGCCTAGTTTAACGAGCTTTTATTGGTATCATCAAAAGA
CATGATGTTTTTTCAAGccctaaatatttcaaaatattagcaACATTTTG
TGTCAAacaggttcggtgaaatggtggccgaattgccatcc Run BLAST on NCBI transcript from alignment at scaffold_122:103485..104725 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047153 ID=TCONS_00047153|Name=TCONS_00047153|organism=Clytia hemisphaerica|type=transcript|length=1241bp|location=Sequence derived from alignment at scaffold_122:103485..104725 (Clytia hemisphaerica)
ggatggcaattcggccaccatttcaccgaacctgtTTGACACAAAATGTt
gctaatattttgaaatatttagggCTTGAAAAAACATCATGTCTTTTGAT
GATACCAATAAAAGCTCGTTAAACTAGGCAAAGAATACAAAAGGAGATTT
GATATAAAGACACCTTAAAGCACAACAGGGAAAAACTTCTGGAACACCCG
GTAGTTTTGAGCTgttttgagctattttacagTAAATAGTAAGCATAGGT
AGGAAGTATTATAGGTAGTAGGCGTTTAGTACTTGCTGCTTTTTCTACTG
AACTTTTTGCCTAGGCGATATAGcgaacatagtaagtataagcagatTCA
AAAGAATTCTGCAAAGGTATAATAAACCTATTTGAACAAAATAAACCTGC
ATCTTTCACTCCTTCATCTTCAAAGTCAACTGAAGTTAAGTACACAATAA
CTGCTTGTTGCATGCTGCTGTGGAATGCGTTATGCAACTTATGCCACAAC
TGACTCTCCTTTTATTTGATGATCATTTTGGGAGTTTCGGTGTTACCACC
TTCAAACTAGCGAGCGCTTTTGTTTTTCCCTttgtccaccattttagatg
ggcttaacaatagatccaaaagggcgctgTTATtgtggaagataatttgt
tttggtctccagctttgAAAAGTAGTATAATGCTTTcggttgtttttgat
ggaaaatataAGAAACTTGAGTTTACAAGTGTAAGTGGCTGATAGAATTG
CAAGATCCTGGATGACTTCCCTAACTAAATTTTCTAAAGAAAGCagcaaa
gtgccgtaaaaaccATTGAATAAAAGATCGTTTTAGAACAACAAGAATCC
CATATCAGAACAAATAAAAAGGTAGAGACTGAAAAGTAAGAAGTGAGTCC
AGATGTGTTTCGCAACTGTGAGGAAGCCAAGACTGTTACAGGAAGGCAAA
TTTCTTCTATAATGTAGAAATTAACAAAGGGTTAAGGGTGAAGCCCAGAg
ggagtacttaggcaaaatgggtgctgggtatgtgtgaGCCATAAGGGTTA
CTacaacacacccctgtctcagtgacccggtgagaaCTTTTCACCCAGCA
GGGATAAATTGAAGGAGccaaatgccaatggggatgaaaaattttaatac
tttaatgggtggggattttaaatattattgtTTACAGCTAAAAAATCGAG
TGGggattccaaaattttttatgcttttctcagtggggatg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047153-exon-scaffold_122-1491911889:103485..104725 | TCONS_00047153-exon-scaffold_122-1491911889:103485..104725 | Clytia hemisphaerica | exon |
| TCONS_00047153-exon-scaffold_122-1510915933:103485..104725 | TCONS_00047153-exon-scaffold_122-1510915933:103485..104725 | Clytia hemisphaerica | exon |
| TCONS_00047153-exon-scaffold_122-1575043694:103485..104725 | TCONS_00047153-exon-scaffold_122-1575043694:103485..104725 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_122 | supercontig | scaffold_122:103485..104725 . |
Blast
The following BLAST results are available for this feature:
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