TCONS_00047166 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047166
Unique NameTCONS_00047166
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3456

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047166 ID=TCONS_00047166|Name=TCONS_00047166|organism=Clytia hemisphaerica|type=transcript|length=3456bp
GCATATTCTTAAGACGTAGAACAAGAAAGTTTAGATTCCTTTTAATTAAC
TTTAATTGGATGAAGAATTAACCCAATTTAGgggttcaaattaaaaaaaa
atgaggcTTAGGCTGCTAGTATTATTACTAGCCCTAGCTTTATGCTTGAC
AAATGCAAAACCACTGACGGATACCCAAACAGAGGAAAGTCCCGATGCAA
CTCCAGAGAAGAAAGACAATACTCCTGAACCAAACACTGAACAATCACCA
GATGAAGACCAAAAGTCAACAGAAGAGGTTGATCAACCTTCTTCATCAGA
GAAAGAAACATCTACTGAATCACAACCAGAAGAAGCTTCAGAATCTGAAT
CCACCAAGGAGGTAGAAGAATCGAATGATGATACTACTGAAGGTGCCAAG
AAGACTGAAGTCCCTAATAagGACGCCGAAGCATCTGAAGAATCGTCAGA
CGATGTCGCAGATACTGAGGACAACACTGATGATGCTGCCAAGAGGGATT
TCGGCGGTGGACATGAGGGTGGTGGCCATCACGGAGACGAAGGTGGTCAC
GAAGGCCAACACGGTCATCACGAACACGACAATCATCATCACGGTCACCA
ACATCATGATCATGGTTATGAATTCTATGAAGAATGGGGAGAGCATGGTG
GTCATGAAGGTGAACATCATGGACACCACGAAGGAGGACATCACGGTGAG
CACGGACATCATCACGGTGGTCACCACGGTGGCGGCGGCGGATACAAACG
TGAGAAAGTTGacaaaaccaaaaccaaaactGCTACCCCTCAAAAAGCTG
AAGATGCCACTGACGGTGAAGATGCTTCCAAGAAATGGTGGTTAGTTGGA
GATCACTGGGGAGGTTGGGGTCACTCCCACTGGGGACACCCTCACGCTAT
TGGTGATGGTGGTGGCTGGCAATGGGGTCACCATGGCTTACACGGCGGTC
ACGGTGGTGGCTACGGTGGCGGCTATGGCGGTGGTTTGGGTGGATACGGT
GGCGGTTATGGCGGCGGTTTGGGTGGATACGGTGGCGGCAACGGAGGCTA
CGGAGGAAATGGCGGTGGTTGCGGTCATGGTGGCTGCGGAGGAGGATATG
GTGGCTATGGAGGTCATGGATATGGCGGAAACGGCCATGGTGGATGTGGA
CACGGTGGTTGTGGTGGACACGTTGGTGGTCACTACAAGAGCAAAATCCC
TGACTGTTGCAAATCCAAAGATCCAAAGGTCACCAAGAGATGTGGATGCC
ATTTGGGAACAACTGGACACGGTCCAGCTGGTAATGGTTTCTTCGGAGGA
CTCGGTGGTGGATACGGAGGACTCGGTGGTGGATATGGTGGACTCGGTGG
TGGATACGGTGGATTGGGTGGTGGATATGGTGCAGGATCTGGTGGGTTTG
GCCTTGGTGGCGCTGTCGGAGGTTGTGGATGCAATGCCGGTGGTTGCGGT
TGCGGCCCTGGTTTCGCTCTTGGTGGTGGCTTGAACAATTACGGTGTATA
TGGACATTCCGGATGGCCAGTACGCAAATTCGACAACTACCGTGTTTGTC
ATAAATGCCACGATCTACCAAGCGGTGGATCACGATGTCTGTGCAAGAGT
GTTCGCCATCATCCATTGTACTTACCTGTTGTTCATCGACCAGCTCACGT
CTACATTGATTGCGATACCAGTGCACACAAATTCGGACACAACAGATGTT
ACGCCAGAGCTGATATTCCTACTCCTGAAGAAGAAAACACAGAGACTGGT
GCAGCCAAACAAGGCGTGTTCTATCCATATGCCAACTATGGTCCATGGTC
TGCCTACCCATGGTGGGGAGACTGGTGGGGTGGTCACGGTCATCATTCTT
GGGGAGAAGGTCACGGTCAGGGTCACGGTGGTGGATGCGGTGGATGTGGT
GGTTGTGGCCATCACGCAGGCGGTTGCCGAGGTAGATGCTCAGGTTGTGG
ACACCACGGTATGGGACGAAATGTTGGATTTAGCTTCGGTCGTGGCGCTC
ATCTTCAAGCTTACCATTGTAAAGATCAAGTTGAGAAAGTGAATGGAGCT
GATGACCACGAAGATGCAACCACCAAGCGATTCTGCGTTCCCATTGGATA
CAATGGTGGATACGGTTTCCCATACTTTCACGGATATCCAGGAGTCGGTA
CGGGACTCTGGGGATGGGGATGGCCTTGGATCAAGAATAAGGTCCCTGGA
TCCAAActcaaagaaaagaaagtgACATCCAAAGATAGCTCAGCATCCAA
ATCTACCAAGGATACTGCTTCTAAAGATACAAAGAAGAGTGCTATCCCAA
GACGACAAACCAAAAAACAAACCATCCATGTTGGTTACGGATACGCAAGT
GGCGACAATTATCGCCTCGGATACGGAATGGGCGGCATGGGTGGCGTGGC
TGGATTCACATCACCCCACGGTGCACCTTTAACACAGTTCGCACGCTCAC
GAATTCCAGCTGCTGAATCAACGAAAGATGTCACCGGTACCAAACGAAAC
ATGGCTTTTTCTCAAGAACCATCATCTACAGGATCAATGTTAGGACATCC
AGTCACACACCCAGGGTTTACAACCATGGGATTCCCAGGGCACGCTGATT
CATCTATCGAAGCACAAAAATCAAGGATCCCaaagaaattgtaaatttat
cGCAATCACCAACCTAATGTCTAACCTATATTTGTATTACATCCATCCAT
CCACTCACCATACAAGATGATGTTATCCTGTTATTAATTGGTGTTATAAC
GTCCCAATAGTACCATAGTTCGTCTTTATAATTGTGTTATTCTGTAATAC
GTAGCTCTTGTAATAACCCCATATTTGTTAATGTAGTTTTATGTATGTTT
TATTATGTGTGTTAGATCATTTGTAAGATCACTCATTATAttattaggcg
agaccaatttaatttgttgttctacgggcccgaccgaccctattttcact
aaaatcaaaaaaataataatattgaattcccactacaatatattttacac
actagttatttgtaagaatcaaatttgaatataacGATCTGCccttagaa
caacaaattaaattggtctcgccttatttAACAAAATAGTCGTGTTATAT
GATTTTAACCATTTGTACAATAGATTTTATTCTAATAGAAAAattaatca
aagtcaatttcacaTTTTATATTATCTCCAAGAGTGCAGGTCAAATTTTA
TCTCACCCGcaaccaaaaaattttttcccaaaattgctATCCCgaaaaat
ctcgttttttctttgtcaatttGATTTAGGTTCACATTTATGTTGTCTCC
AAGAGTGCAGGTCAAATTTTATCTCAGCCGCAACCAaaacttttttccca
aaattgctATCCCgaaaaatctcgttttttctTCCCTATGAGAAGTCAAA
GTTACCTCACAAGATTTTAGCATTTCCTAGAATGCTTCGTTTAAGTCAAA
TAGCAT
Run BLAST on NCBI

transcript from alignment at scaffold_123:57681..66929+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047166 ID=TCONS_00047166|Name=TCONS_00047166|organism=Clytia hemisphaerica|type=transcript|length=9249bp|location=Sequence derived from alignment at scaffold_123:57681..66929+ (Clytia hemisphaerica)
GCATATTCTTAAGACGTAGAACAAGAAAGTTTAGATTCCTTTTAATTAAC
TTTAATTGGATGAAGAATTAACCCAATTTAGgggttcaaattaaaaaaaa
atgaggcTTAGGCTGCTAGTATTATTACTAGCCCTAGCTTTATGCTTGAC
AAATGCAAAACCACTGACGGATACCCAAACAGAGGAAAGTCCCGATGGTA
TGttcaatttttattgttttgcttctttttcatttataacTGACTGGTTT
CAGCAAAGTTGTTTTTCTAGGGTAATATTTATTCCtgagaaatttttctt
gaaagcaTTCCTAATAAAGTCTTTTCTCTTGATAGttgatttttttcgtt
tttctctTAATTGTATTTGCATACAGATTCCATTAAATCATGAGTTTTGA
GCTTGTGGACAACGCACTTTTTCGTTGTTTGAATTTTCGGTTGGCTAATA
AATGCTGAAACTTGCCAGAAAATTATCTTTAATTGTATCAGAAAGAACCG
AgaatagattttaaaattgGACTTCGTTTCCTCCGAAAGCTTAAGTTAAC
CAAGATCAAATACCAAGCTTCTCCAAAAACCTTCTTATAAATTCCCTGGT
TATTTCATCTTCTATTCACACATTACAGCAACTCCAGAGAAGAAAGACAA
TACTCCTGAACCAAACACTGAACAATCACCAGATGAAGACCAAAAGTCAA
CAGAAGAGGTTGATCAACCTTCTTCATCAGAGAAAGAAACATCTACTGAA
TCACAACCAGAAGAAGCTTCAGAATCTGAATCCACCAAGGAGGTAGAAGA
ATCGAATGATGATACTACTGAAGGTGCCAAGAAGACTGAAGTCCCTAATA
aggtatttttcttttcttatacaAGTTTGTTGCCAATCTATTGGCATTTT
TAAAATCTATGGCTCAAACATGAGGTTTGAAGTACTCACAATTTAGTTAA
GCACGAGAATGTTAAAAAAAGACTTTCGAATTCTGTTTGATTATCTGTTT
CATTACAACACTCTAAGTTGAACCGTTTATGGATTTAGAAAATCACACTG
TTATACAAAATATCCAGTCATGGCATAGTACAGTTTGTCGGAAAGATATA
TTCTACAAAGAAATACACCAGCAAACATTAAATAGTTTTCATGTTTTAAG
TAACTAGATGATTTTCGTCCTGAACAAGATGATaggcaaaaaattttctt
tcttttccacaAATGGAATGCAGTCAACGGAGTTGAtgagaaaaaaactg
aatttcggTTTTCTGAAAATACTTTTTGTTAATAGTTAGTAGTTTTTTCA
CGTAACCTTTCCCCATGAAAACAGCTCTGTTGGCTGCTTTTGATCAAACT
TGcatgtttttatcaaatgatgTATATCAATTTGCTGTCCAAAAAAAGCC
AATTTTTATGGTGAAAGAATCCTGAAGATTATCCTTTATTGATCTGGAAT
GTTCTTAGTTCCCGACCGAATAAGGTACGTGCTTTTCAAAAGCAGCAGTC
AACACGGGTTGTTTTTAATGAGAAAGGGCTGTCTCTATCACACAAacaat
ttgaaagttttaataatAATTACAAGTCTCAAAGTTTTATTGGGCACAGG
CTTTCTCGTAAAGACAGCTCTGTTGATTGCTgaccttttgtttcttttca
cttttttttctaatttctgaaaattttgatcAGTTCTTTAAATAACCTAT
TTACCTTTCAACCATTGCACAAAAAGGTTGCATGAAAAAAGGTTCTACCG
AGGGTCGAATAACGTTAAACGGAGTATCATTGCTTTGCGTTAACGGAGTC
GGTAGTACTGACATTTGACGTCATCGACCCTTGTAAATTGCTCACACTTA
TTTCAAGTGTCTTGTTGCTTTTTTACTCCTTTGGTGATTATCGAACGCCG
TTGAACGCCATGAACTTGTACTATTAGACAAAATTCTTATCTTAACTTAT
CTGCTGCATTTTACGCACATTTACTTAATTTACATTTACTTCATAGCGGA
ACCAATCTAACCCCAGTTCTTTTATCGcattctcttttttttcattttta
gaaaccgaagaagaagaagaaatcttccaaaagcaaGAAAACAAAATCCA
AAGCCAAATCTACTAAAGAAATAGACCGTCGATATGGTATGGGCGGTTAT
GGCGGTGGTATGGGCGGACATCATATGGGTGGACATCACATGGGTGGACA
CCACATGGGACATCACGGTCACCATGGACACCATGATCACGATCACGGAC
ATGAGCATTATGAAGAATGGGATCACCATGGAGAGCATGGAGACCACCAC
GGTGGAGGACACGGACATCACCACGGTCACCATGGACACCACGATCACCA
CGATCATGGTCACCATCATGGTTTCCACCACGATTGGCATCATGATCATG
GAGGTCATCATGGTGGACATCACGGTCATGGAGGTGGAGGAATGATGGGA
GGTGGAGGATACCGTCGTGATGAGCTGACTGCTAACAAGAGGTTTTTCAT
GCCATTCAGTCCTTTCAGTGGAGGAAATCCTGGACCCTTCAATGAGGGAA
TAGTTGATGTTTTTAACATGAATCCACTTCAATGGCCCAACCCCTGGACA
CGAAATTGGATCGGTGCTAACGAAGGAGGACCACCTGTCTCTGGTGTCTT
CAACACACAATACCAAATACCCGCACTTCCTGTTGTAGCCGCTTTGAATT
CAGGATTACTAAGCAATTCAGCGGGATCATGGGAAAGTCCGGCAGTGTTG
GCTGGTAGCAGAAGATCATTAAAGAGCACTGGATGTCAACCAGGAGATTC
TGGTAAACGTGGATGCGGATGTGCTGGTAATCATGAGAAATGCGGTGGAC
AGGGATACAGCGGTGGGTTTGGTTTGAACCACGGTGATCATTATGATGAT
GGCTTCCACGGTGGCCTACATTTCCCACTTGGTGGATGGTATGGTTGGGG
TGCATGGCCATGGGGCACTTACGGTGATTTTGTCGGCCACCATGGTAATG
CTGTACCATGTGATGTACCACACCACGAACATCATTTAGATAACAACAGT
GGTTATGATGAAGGTGAAGGACGAGTTGGTCATACCGGTGGCTACGGTGG
TGGTGAATACAGCGGGCATCACGGTGATTGTGGTCACGGACACGGCGGTT
GTGGAGGTCATGATGGACACCATGGATCAGGATACGGTGGATATGCAGGT
CATCACGGTGGTCACGGCAGCTACGGAGGAGTTGGAACACAAAGCGGACA
CGGTCATCACGGAGGTGGTCATGGTCACGGCGGCTACGGTAACCACGGAA
GTTACGGCGGCCATGGACACGGACATTGTAGAAGTCAAATTCCTAAAAGC
ACAATCGATAAACCATTCTTACCAATGTCAGCTGTTATGGAAGACTTTTA
GATCAATCAAATAATAATAGCCAATAAACACTATTTATATAACCGTCata
gtattttttcattgattAATATTTAATCTTTTGTCATCCTGTGTTTCGTC
TTGTAAATATTCTAGCATCcattattcaaaaagaaaagaagtatGTTTTT
GTTAATTATTTTTGAACACGTTTTGATTCGGACAGAACCGGCGGATAGAA
GAAGAGATCTCGCATTAATTTTGAATTCGCATTTTATGCTTTTTCATCAA
CTCCGTTTACTACAATGAAAccttttttaagctaaaaacaTTTAGACCAC
ATATCAAATATCTTCATAgttattcaaaatgaaattaaatttttaaaaac
caacACTTTCGTAAGGACCCCTTTTTAGCCTCATTTTCAAGTATTGCTTT
CCCTTATGACTtgtcaaggaaaatgaaaaacagtGTACTGTAAACACTGT
AAATCTTCTATCTTTCTTAATCAGGACGCCGAAGCATCTGAAGAATCGTC
AGACGATGTCGCAGATACTGAGGACAACACTGATGATGCTGCCAAGAGGG
ATTTCGGCGGTGGACATGAGGGTGGTGGCCATCACGGAGACGAAGGTGGT
CACGAAGGCCAACACGGTCATCACGAACACGACAATCATCATCACGGTCA
CCAACATCATGATCATGGTTATGAATTCTATGAAGAATGGGGAGAGCATG
GTGGTCATGAAGGTGAACATCATGGACACCACGAAGGAGGACATCACGGT
GAGCACGGACATCATCACGGTGGTCACCACGGTGGCGGCGGCGGATACAA
ACGTGAGAAAGTTGacaaaaccaaaaccaaaactGCTACCCCTCAAAAAG
CTGAAGATGCCACTGACGGTGAAGATGCTTCCAAGAAATGGTGGTTAGTT
GGAGATCACTGGGGAGGTTGGGGTCACTCCCACTGGGGACACCCTCACGC
TATTGGTGATGGTGGTGGCTGGCAATGGGGTCACCATGGCTTACACGGCG
GTCACGGTGGTGGCTACGGTGGCGGCTATGGCGGTGGTTTGGGTGGATAC
GGTGGCGGTTATGGCGGCGGTTTGGGTGGATACGGTGGCGGCAACGGAGG
CTACGGAGGAAATGGCGGTGGTTGCGGTCATGGTGGCTGCGGAGGAGGAT
ATGGTGGCTATGGAGGTCATGGATATGGCGGAAACGGCCATGGTGGATGT
GGACACGGTGGTTGTGGTGGACACGTTGGTGGTCACTACAAGAGCAAAAT
CCCTGACTGTTGCAAATCCAAAGATCCAAAGGTCACCAAGAGATGTGGAT
GCCATTTGGGAACAACTGGACACGGTGGGTACCATTTTAGTGATCATGGT
TCAGGGCATGATAACCATGATCATCGCATCCAAGGCCCATGGAGTTTCGG
ATATGACCATTTCGGGGATGATTGGTCTGACTGGGATCATAACACGCATT
CGTTCCGTTATTTGACTGATATGACTCACTTGCCACATGATGATCATTGT
GGACATGGCCGTGCATGTGTTCCATTGAACGGTGTTCACCGATTCTCACG
ATTTTATCCTTCTCTTCATTTTGAAGGTCCAGCTGGTAATGGTTTCTTCG
GAGGACTCGGTGGTGGATACGGAGGACTCGGTGGTGGATATGGTGGACTC
GGTGGTGGATACGGTGGATTGGGTGGTGGATATGGTGCAGGATCTGGTGG
GTTTGGCCTTGGTGGCGCTGTCGGAGGTTGTGGATGCAATGCCGGTGGTT
GCGGTTGCGGCCCTGGTTTCGCTCTTGGTGGTGGCTTGAACAATTACGGT
GTATATGGACATTCCGGATGGCCAGTACGCAAATTCGACAACTACCGTGT
TTGTCATAAATGCCACGATCTACCAAGCGGTGGATCACGATGTCTGTGCA
AGAGTGTTCGTCATCATCCATTGTACTTACCTGTTGTTCATCGACCAGCT
CACGTCTACATTGATTGCGATACCAGTGCACACAAATTCGGACACAACAG
ATGTTACGCCAGAGCTGATATTCCTACTCCTGAAGAAGAAAACACAGAGA
CTGGTGCAGCCAAACAAGGCGTGTTCTATCCATATGCCAACTATGGTCCA
TGGTCTGCCTACCCATGGTGGGGAGACTGGTGGGGTGGTCACGGTCATCA
CGCTTTTGGAGAAGGTCACGGTTCGGGTCACGGTCAGGGTCAGGGTCACG
GTGGTGGATGCGGTGGATGTGATGGTTGCGGTAATCACGCAGGCGGTTGC
CGAGGTAGATGCTCAGGTTGTGGACACCACGGTATGGGACGAAATGTTGG
ATTTAGCTTCGGTCATGGCGCCCATCTTCAAGCTTATNTCATAACACGCA
TTCGTTCCGTTATTTGACTGATATGACTCACTTGCCACATGATGATCATT
GTGGACATGGCCGTGCATGTGTTCCATTGAACGGTGTTCACCGATTCTCA
CGATTTTATCCTTCTCTTCATTTTGAAGGTCCAGCTGGTAATGGTTTCTT
CGGAGGACTCGGTGGTGGATACGGAGGACTCGGTGGTGGATATGGTGGAC
TCGGTGGTGGATACGGTGGATTGGGTGGTGGATATGGTGCAGGATCTGGT
GGGTTTGGCCTTGGTGGCGCTGTCGGAGGTTGTGGATGCAATGCCGGTGG
TTGCGGTTGCGGCCCTGGTTTCGCTCTTGGTGGTGGCTTGAACAATTACG
GTGTATATGGACATTCCGGATGGCCAGTACGCAAATTCGACAACTACCGT
GTTTGTCATAAATGCCACGATCTACCAAGCGGTGGATCACGATGTCTGTG
CAAGAGTGTTCGTCATCATCCATTGTACTTACCTGTTGTTCATCGACCAG
CTCACGTCTACATTGATTGCGATACCAGTGCACACAAATTCGGACACAAC
AGATGTTACGCCAGAGCTGATATTCCTACTCCTGAAGAAGAAAACACAGA
GACTGGTGCAGCCAAACAAGGCGTGTTCTATCCATATGCCAACTATGGTC
CATGGTCTGCCTACCCATGGTGGGGAGACTGGTGGGGTGGTCACGGTCAT
CACGCTTTTGGAGAAGGTCACGGTTCGGGTCACGGTCAGGGTCAGGGTCA
CGGTGGTGGATGCGGTGGATGTGATGGTTGCGGTAATCACGCAGGCGGTT
GCCGAGGTAGATGCTCAGGTTGTGGACACCACGGTATGGGACGAAATGTT
GGATTTAGCTTCGGTCATGGCGCTCATCTTCAAGCTTATCATTGTAAAGA
TCAAGTTGAGAAAGTGAATGGAGCTGATGACCACGAAGATGCAACCACCA
AGCGATTCTGCGTTCCCATTGGATACAATGGTGGATACGGTTTCCCATAC
TTTCACGGATATCCAGGAGTCGGTACGGGACTATGGGGATGGGGATGGCC
TTGGATCAAGAATAAGGTCCCTGGANGACTCGGTGGTGGATACGGAGGAC
TCGGTGGTGGATATGGTGGACTCGGTGGTGGATACGGTGGATTGGGTGGT
GGATATGGTGCAGGATCTGGTGGGTTTGGCCTTGGTGGCGCTGTCGGAGG
TTGTGGATGCAATGCCGGTGGTTGCGGTTGCGGCCCTGGTTTCGCTCTTG
GTGGTGGCTTGAACAATTACGGTGTATATGGACATTCCGGATGGCCAGTA
CGCAAATTCGACAACTACCGTGTTTGTCATAAATGCCACGATCTACCAAG
CGGTGGATCACGATGTCTGTGCAAGAGTGTTCGCCATCATCCATTGTACT
TACCTGTTGTTCATCGACCAGCTCACGTCTACATTGATTGCGATACCAGT
GCACACAAATTCGGACACAACAGATGTTACGCCAGAGCTGATATTCCTAC
TCCTGAAGAAGAAAACACAGAGACTGGTGCAGCCAAACAAGGCGTGTTCT
ATCCATATGCCAACTATGGTCCATGGTCTGCCTACCCATGGTGGGGAGAC
TGGTGGGGTGGTCACGGTCATCATTCTTGGGGAGAAGGTCACGGTCAGGG
TCACGGTGGTGGATGCGGTGGATGTGGTGGTTGTGGCCATCACGCAGGCG
GTTGCCGAGGTAGATGCTCAGGTTGTGGACACCACGGTATGGGACGAAAT
GTTGGATTTAGCTTCGGTCGTGGCGCTCATCTTCAAGCTTACCATTGTAA
AGATCAAGTTGAGAAAGTGAATGGAGCTGATGACCACGAAGATGCAACCA
CCAAGCGATTCTGCGTTCCCATTGGATACAATGGTGGATACGGTTTCCCA
TACTTTCACGGATATCCAGGAGTCGGTACGGGACTCTGGGGATGGGGATG
GCCTTGGATCAAGAATAAGGTCCCTGGATCCAAActcaaagaaaagaaag
tgACATCCAAAGATAGCTCAGCATCCAAATCTACCAAGGATACTGCTTCT
AAAGATACAAAGAAGAGTGCTATCCCAAGACGACAAACCAAAAAACAAAC
CATCCATGTTGGTTACGGATACGCAAGTGGCGACAATTATCGCCTCGGAT
ACGGAATGGGCGGCATGGGTGGCGTGGCTGGATTCACATCACCCCACGGT
GCACCTTTAACACAGTTCGCACGCTCACGAATTCCAGCTGCTGAATCAAC
GAAAGATGTCACCGGTACCAAACGAAACATGGCTTTTTCTCAAGAACCAT
CATCTACAGGATCAATGTTAGGACATCCAGTCACACACCCAGGGTTTACA
ACCATGGGATTCCCAGGGCACGCTGATTCATCTATCGAAGCACAAAAATC
AAGGATCCCaaagaaattgtaaatttatcGCAATCACCAACCTAATGTAA
GTTTACCTCAGATTTATAATTTGGCTTTATACAGGGAACTAATTACGTTA
CGTTTATGAGAGAAACCTCCTTAGGCTAAAATCAAATGTGATATTTGTAG
ATATTTTTTTCTTCGCTTTTGTTATTAAATTTGGACTGAAGTTTTGATTT
TGttattgaaaactttttgctttCAATTGATTTTTCATTGACCAATCAAA
CAAAAGAATCAATCATTATAATTGGTATTGTGATTTATTTTCCTATATTT
TATCTTTACAGGTCTAACCTATATTTGTATTACATCCATCCATCCACTCA
CCATACAAGATGATGTTATCCTGTTATTAATTGGTGTTATAACGTCCCAA
TAGTACCATAGTTCGTCTTTATAATTGTGTTATTCTGTAATACGTAGCTC
TTGTAATAACCCCATATTTGTTAATGTAGTTTTATGTATGTTTTATTATG
TGTGTTAGATCATTTGTAAGATCACTCATTATAttattaggcgagaccaa
tttaatttgttgttctacgggcccgaccgaccctattttcactaaaatca
aaaaaataataatattgaattcccactacaatatattttacacactagtt
atttgtaagaatcaaatttgaatataacGATCTGCccttagaacaacaaa
ttaaattggtctcgccttatttAACAAAATAGTCGTGTTATATGATTTTA
ACCATTTGTACAATAGATTTTATTCTAATAGAAAAattaatcaaagtcaa
tttcacaTTTTATATTATCTCCAAGAGTGCAGGTCAAATTTTATCTCACC
CGcaaccaaaaaattttttcccaaaattgctATCCCgaaaaatctcgttt
tttctttgtcaatttGATTTAGGTTCACATTTATGTTGTCTCCAAGAGTG
CAGGTCAAATTTTATCTCAGCCGCAACCAaaacttttttcccaaaattgc
tATCCCgaaaaatctcgttttttctTCCCTATGAGAAGTCAAAGTTACCT
CACAAGATTTTAGCATTTCCTAGAATGCTTCGTTTAAGTCAAATAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030066XLOC_030066Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047166-exon-scaffold_123-1491911889:57681..57877TCONS_00047166-exon-scaffold_123-1491911889:57681..57877Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1510915933:57681..57877TCONS_00047166-exon-scaffold_123-1510915933:57681..57877Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1575043694:57681..57877TCONS_00047166-exon-scaffold_123-1575043694:57681..57877Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1491911889:58309..58532TCONS_00047166-exon-scaffold_123-1491911889:58309..58532Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1510915933:58309..58532TCONS_00047166-exon-scaffold_123-1510915933:58309..58532Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1575043694:58309..58532TCONS_00047166-exon-scaffold_123-1575043694:58309..58532Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1491911889:61555..62404TCONS_00047166-exon-scaffold_123-1491911889:61555..62404Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1510915933:61555..62404TCONS_00047166-exon-scaffold_123-1510915933:61555..62404Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1575043694:61555..62404TCONS_00047166-exon-scaffold_123-1575043694:61555..62404Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1491911889:63559..63708TCONS_00047166-exon-scaffold_123-1491911889:63559..63708Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1510915933:63559..63708TCONS_00047166-exon-scaffold_123-1510915933:63559..63708Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1575043694:63559..63708TCONS_00047166-exon-scaffold_123-1575043694:63559..63708Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1491911889:64630..65876TCONS_00047166-exon-scaffold_123-1491911889:64630..65876Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1510915933:64630..65876TCONS_00047166-exon-scaffold_123-1510915933:64630..65876Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1575043694:64630..65876TCONS_00047166-exon-scaffold_123-1575043694:64630..65876Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1491911889:66142..66929TCONS_00047166-exon-scaffold_123-1491911889:66142..66929Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1510915933:66142..66929TCONS_00047166-exon-scaffold_123-1510915933:66142..66929Clytia hemisphaericaexon
TCONS_00047166-exon-scaffold_123-1575043694:66142..66929TCONS_00047166-exon-scaffold_123-1575043694:66142..66929Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:57681..66929 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.136	0	0.0521088	0.0920601	3.26662	3.41713	43.5139	46.8611	9.35619	10.9676	54.1567	37.0829	66.5423	55.0351	31.4901	93.6816	48.8687	46.4804	0.127429	0.330886	31.8669	37.9469	34.0546	37.4848	77.7945	91.1825	9.32973	1.88627	0.598716	0.45822
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047166 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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