TCONS_00047169 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047169
Unique NameTCONS_00047169
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4087

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047169 ID=TCONS_00047169|Name=TCONS_00047169|organism=Clytia hemisphaerica|type=transcript|length=4087bp
GAAAGACGCTTCTTTCAACGAGAATGTTCGATTCGAAcatatgctgaaga
tgagtttCTACTCTAGTAAAATGCTTTAGCTTGTAAACACtatgttttaa
aaattgttcGCCTGGTTAGCGTCCTACTATTGAGTTATATAGGAACCAAG
AAATGGTCAATTTTTAACTTTGCCAGTAAATCACTTCAAGattcTTGAAG
ATGGGGAGGGTGCTCCTTCTTTTGGCGGGCATAACCTTCTTGTTTATCAT
TGATGGAGAATGCAAAAAGAAGAAGTCAGCATTTTCTTTCGATTCTTTAC
TCTCTGGTTTGGATGGTGACGAAAAAGCAATGTTTCGTGAAGAACTAGAA
AAAGAAGTCAAAAAGTTTCATGTTCCAAAACACAAATCACATACCAGTGC
TTCCAAACGAACCCGTCAACGTGAGCGACCTCGAGAGAGACCACGACATG
AGAGTTACAACACATACCGTGCTCCATCACGATACAGTCCACCTGCCGCA
CGATCATACCATAAACCTGTTACACCTGGAGTTTGTGACCCGATCTGTGA
GCATCAGTGTGTGCATGGATGCGATTTCAGATGCTGTATACCACACTATC
AAGTAGCTCATAACGTACCAAGGCCCTTACCTCATGTCTCACTGCCCGGC
TCATGTAGCCTGAGTTGTTCGCCTACATGTTATCCTGAGTGTAACCCGAA
CTGTTGTGCAGGTGGACCTTCGGGTATGTTCCAATCTGCAGACCTACAGG
CTATGTTCCCGCCAGTATGTCCTGCACCATGCCCTGGTCATTGCTTCCCA
GCCTGCGATGCTACCTGTTGTCGTTCAGCTCCAGCTGCTAATCCATTTAA
TAGAATGTACCAGCCACAGCCTGCACGACCAAGGGCACCACCTATGAGAC
CACCAGCACCTCGACCCTACCCACCTGTTCCACCTCAGCAGCCTGGAATG
ATGACTGGTATGTTACCACCAATGACCCCTACATCAGGTTTCGCACATTG
CGGTGCTCAATGTCCACAAAGTTGCGCTCCAACCTGCTTGACATCCTGTT
GCATGCAGTCTGCTGCCCCTCAACCACCACCTGTTGCTATGGCACCTTCC
CCAATGATGATGCCACCTGCTATGATGGCACCTCAACAACCTGCAATGTG
TCCTGGAAGCTGCCCTGCATCTTGTGCTCCCTCCTGTTTACCCTCATGTT
GCAGCCCTCTACCACAGATGCCTCCACCTGCTCCAGTCGGCATGTGCCCT
GGTCAGTGTCCATCATCATGTGCTCCTTCCTGCCTTCCATCATGCTGTTC
AGGTCAACCATCTATGATGATGCCTGCACAATTACGTACAGTCCAGAACA
CTCCTGATGTGAGTACAGCATCAGCTATAACGCCGAACCCTAATTCATGT
CCTGCGTACTGCCCAGATCATTGTTTACCGAACTGTACACAGACTTGCTG
TAACCCACCTGCGAGCGATTCACAAACTATTgataagaaatcaaaaatct
cGAAGATTGCTGCACAACTTGCTATGCTTCGCAAGAAACGTAGTATGGAC
GCTTGAACCAGTATTGTTTTGGGAATTTCGAGCAATGATAGGTAAAGTTT
CTTAGGATAACTTTGCGGATTAGTACGCTAACAGGTAGCGTGTTACCTTA
AAGAAGCGGGAATTTACGACTTTAGACCGTTTTTCAATCATCAGTTGTTG
GTACCTTATATTAGCAGGCCTTTAAGATGAAAATGATAAGCTTTTGAAAT
ACTTGACATGTTCATTTTTAATATAACTATGTTTTTCTacattacaaaaa
tattttatataatacctcaatttttatattttaaagcaacatgattattt
tgtaaatatataTCGTTAAGTCTATTCTACAATTACTGTAGACTTATAGT
TTCCACTTCCCAAGATTATACTTTTATCTAACGAAATTAAGATGTAGAAC
CCCTAGAAAAGTTCGTGAAACGTGGAAAATAATAGTCTTACAGTACTATT
TTATATATAAGAAACTCGATGAACACAAGGATAGTTATAGCTCCAAATTA
TTTCTACGGGTTTATATTTTAATCGAAGTGTTATTATGTTTAGTAGATGA
TGGGTGTGTGTTACTCGCAAGTCCATTCTTAGCTCTGTAAAGTTTTCCCA
AATTTGTACATTTATTGTGGCCCTGGAGTAACTTTTTTTCTCGTCTGAGA
ATACTGTATCCATTTAATTTGTATTTTGGCCTTTTGTCCAATTTGTGTCC
TCCGAGGTATGATGTGTAGCTTTTATAGCACTTTACAATACAGCTCTTTC
ATATGAAAAAGTCTCTAGTTTCTTAGTGTTGTTTCTGTTTTTGAGGTTGT
CATGGGTGTTTGATGGTACGAGATGTACGAGTTAACCCCTTACTCCTTCC
TTTCTTCAACTGTAAAAGCTTTGATGTCTTGAATTTGATGTCTATTCAAT
ATTTAGTACCTTGGGTACCATGGATAAGGGTATCTTCTATTAGATAAGTA
AGACTGTTCTTGATAATTATAAGGGTTCCTGTAGAATGGTACTATATTGC
GTCTCTGGTAGTAGTATGATCTGTTAGGTATTCGACTTCTCTTGACGGGA
TCTTGAACGATGAAAGAATCAGTCTGGGTTAAGGTCGGGTATCTATAGAT
AGTGTCTCTTTTACCGTCCTCTAAAATCTCATATGTCTCATCAGTAGGGT
TAAGTTGTTGTTGTGGTAGATACGGCGCCTCTTCTTTTGGTTGTTGTAGA
TATTGCGCCTCTTCTTGGTCCGGATCATATGGTTCTGTGATTTCATTCTC
AAACGGGTCTGGTTGTCGAATGGAATCACGCTGCGTTTTTTTCTTCTGCT
CTTCGTTAGTAGGAAGAACATTTGTTGGGATATCTGCGTGTTTCTCCTTG
TGTTTGCTTTCAACGCGCTTTGCTACATTCATGACTTTCTCTAACAGCTT
TATACTGTTATTCAATTCGATTTGACTTCGACTGGATGCTGAATCGTCCT
TTTTCTTTTCGCCATCCATCAGatagatatttttcttttcaccGTGTGAT
TTCGCTTGATTAATCAATGAAATCTTCTTCTCCAGAATACCGATAGCAAC
GTTCAAGTCACTCACTGCTTCCTTAGTCTCCTTCTCTTCGTTATCCAAGG
TCTTATTATCAATATGTTTTGGTGCTTTTTCGGTGATTTGACCAATACCT
TTAAGGACATCAACAACTTGGCTGGAAACTGTAGCATTCTCAGCTACCAC
TTTCTCGCGTTGTTGGGAAGCGTCAGTCGTATCATTCTTTACCGAAGGCT
TTGATAAGGAAGCTTCACTTAATGAGGATTTAGTTTCAGCTGGTTTTTCA
TCCACAGATTTCTGTTGTAACTGAGCCTTCTCTTCTTTGGGACTTTGAAT
CTCATTAACCTTCTTAACATCATTGGCTTGTTGTTTTTCGATCACATTCT
CGATTTTCTTATCCATGTTCTTAACATCTTCAGACTTACCTTGATGAGCC
AATGGCTTACCATCAAGTGCATTCATTGCATTTTCTGGTGTCATGGCAAC
AGGTTTCGGGTTCTCTTTCGGAGCCTCGACGGAattgattttcgtatttt
cccTTTCCGACTCTTCTCTAGCTTGTTTCTCTAAAGCAGTCTTCAGTTGT
CTCTCACGATCGGCTTTTTCCGCTAACTCAGTCGCCCGTTCTTGTGCTTT
GACCGGATCCAACAGTGCAGCTTTTTCTTGATCACCGGGTTGTTCCGTAT
TCAAGGCTAACCCGCCTTTAACATTCTCCTCTTCGTTCTTCATCAGTCTT
TGAGTTTCTGAACCACCAAGAGCTAAACTATCTGGTGGTTCCTTCAACGC
TGATAACGTGTTGACAATCTTGTCTGAATCTAAGTAATCGTGTTGTTCTA
GTTTGGAGATTGTTTCCTCTGTATCACCAAATGACTTTGAGAATGGATCA
CCAGTTGCTTGTTTCGGCGATGATAAATGCTGTTGTTGTACCACCCCAGG
CTCCCCATCACGCAATTCTAAAAGGAAACGAAGTAATACGAGTTGTTAAT
TGTCGTAATCTTGTGCCGAATCTTTCCTTCTACGTCG
Run BLAST on NCBI

protein sequence of TCONS_00047169-protein

>TCONS_00047169-protein ID=TCONS_00047169-protein|Name=TCONS_00047169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MGRVLLLLAGITFLFIIDGECKKKKSAFSFDSLLSGLDGDEKAMFREELE
KEVKKFHVPKHKSHTSASKRTRQRERPRERPRHESYNTYRAPSRYSPPAA
RSYHKPVTPGVCDPICEHQCVHGCDFRCCIPHYQVAHNVPRPLPHVSLPG
SCSLSCSPTCYPECNPNCCAGGPSGMFQSADLQAMFPPVCPAPCPGHCFP
ACDATCCRSAPAANPFNRMYQPQPARPRAPPMRPPAPRPYPPVPPQQPGM
MTGMLPPMTPTSGFAHCGAQCPQSCAPTCLTSCCMQSAAPQPPPVAMAPS
PMMMPPAMMAPQQPAMCPGSCPASCAPSCLPSCCSPLPQMPPPAPVGMCP
GQCPSSCAPSCLPSCCSGQPSMMMPAQLRTVQNTPDVSTASAITPNPNSC
PAYCPDHCLPNCTQTCCNPPASDSQTIDKKSKISKIAAQLAMLRKKRSMD
A
Run BLAST on NCBI

transcript from alignment at scaffold_123:70815..75958+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047169 ID=TCONS_00047169|Name=TCONS_00047169|organism=Clytia hemisphaerica|type=transcript|length=5144bp|location=Sequence derived from alignment at scaffold_123:70815..75958+ (Clytia hemisphaerica)
GAAAGACGCTTCTTTCAACGAGAATGTTCGATTCGAAcatatgctgaaga
tgagtttCTACTCTAGTAAAATGCTTTAGCTTGTAAACACtatgttttaa
aaattgttcGCCTGGTTAGCGTCCTACTATTGAGTTATATAGGAACCAAG
AAATGGTCAATTTTTAACTTTGCCAGTAAATCACTTCAAGGTTGGTttta
atttgtttgttttgcatTTGTCggaatttgtttgttttcttaGCCATTAT
TTACTTCCCTAAATGATTTGCCACATTTTAAGCAAATGTTTCTTCCTTGG
ACAGGTTCACCAGCATGGCTatactttttcaaaaacaaaggaatgcATTG
TTTTCGGCCCCAGATTTATATGCTAAGTAAATGTTTTTGTTTCTACAGAA
GAAAACGTGAATTTAACCAATCAcgattttgtgaattttttatttagatt
cTTGAAGATGGGGAGGGTGCTCCTTCTTTTGGCGGGCATAACCTTCTTGT
TTATCATTGATGGAGAATGCAAAAAGAAGAAGTCAGCATTTTCTTTCGAT
TCTTTACTCTCTGGTTTGGATGGTGACGAAAAAGCAATGTTTCGTGAAGA
ACTAGAAAAAGAAGTCAAAAAGTTTCGTAAGTGGAATCATTCTTTTTAGA
AGAAATATCCTCGTCTGTTTGTGTTTTTTCGAAATAAGCACGCTTAAATA
CTTTTAAGATGTCCTaaaggctggtctccactttcgtgcgaaaagagcga
aaacttttttgacgtttttgtaaggtcgcttgaaaaatgaagcaattgcC
TTGGgcaatctgacgtaacggtttaaaaaagtttaaattttttcactctt
ttatttttttcgcttgaaacttttttaatgacgtaatcttttctgcaGGC
GAAAACGATTGACAAAAAATGTTCGCTCATTTTCACGCGTACGTGAAGTA
CGGAGTACGGCCATAGTTTCATGGAGTACGGCCATAAATATGGCTTAGAT
CAGTATTTTTAGGAATGTCCAAAGcctttcatttatttattccAGTGTAA
TTAGAGCAAGTCCTTGAGGGTGGTTTTCTACACCCTTTTAATATAGTAAC
TTTGATTATTTTTCAGATGTTCCAAAACACAAATCACATACCAGTGGTAA
GTTTCCTCTTATTCCATGTTGTCTGTCAGAACTACAACAATGTTCCCATT
GCAAATTGTATATTGTTCGAACAAAAATCACACATTACTGTAATGCTAAA
TTACAAAGCTCATTCTTTGCCCAACCCATCAGTCATGAGCCTTGTTACCT
TATCAGTATTATACAAACTACCTGTCTACTTTGAAATCTCCATTTCGACG
TTCAAGTTATGGAAACTCAACTCtacattattttctttcttaGCTTCCAA
ACGAACCCGTCAACGTGAGCGACCTCGAGAGAGACCACGACATGAGAGTT
ACAACACATACCGTGCTCCATCACGATACAGTCCACCTGCCGCACGATCA
TACCATAAACCTGTTACACCTGGAGTTTGTGACCCGATCTGTGAGCATCA
GTGTGTGCATGGATGCGATTTCAGATGCTGTATACCACACTATCAAGTAG
CTCATAACGTACCAAGGCCCTTACCTCATGTCTCACTGCCCGGCTCATGT
AGCCTGAGTTGTTCGCCTACATGTTATCCTGAGTGTAACCCGAACTGTTG
TGCAGGTGGACCTTCGGGTATGTTCCAATCTGCAGACCTACAGGCTATGT
TCCCGCCAGTATGTCCTGCACCATGCCCTGGTCATTGCTTCCCAGCCTGC
GATGCTACCTGTTGTCGTTCAGCTCCAGCTGCTAATCCATTTAATAGAAT
GTACCAGCCACAGCCTGCACGACCAAGGGCACCACCTATGAGACCACCAG
CACCTCGACCCTACCCACCTGTTCCACCTCAGCAGCCTGGAATGATGACT
GGTATGTTACCACCAATGACCCCTACATCAGGTTTCGCACATTGCGGTGC
TCAATGTCCACAAAGTTGCGCTCCAACCTGCTTGACATCCTGTTGCATGC
AGTCTGCTGCCCCTCAACCACCACCTGTTGCTATGGCACCTTCCCCAATG
ATGATGCCACCTGCTATGATGGCACCTCAACAACCTGCAATGTGTCCTGG
AAGCTGCCCTGCATCTTGTGCTCCCTCCTGTTTACCCTCATGTTGCAGCC
CTCTACCACAGATGCCTCCACCTGCTCCAGTCGGCATGTGCCCTGGTCAG
TGTCCATCATCATGTGCTCCTTCCTGCCTTCCATCATGCTGTTCAGGTCA
ACCATCTATGATGATGCCTGCACAATTACGTACAGTCCAGAACACTCCTG
ATGTGAGTACAGCATCAGCTATAACGCCGAACCCTAATTCATGTCCTGCG
TACTGCCCAGATCATTGTTTACCGAACTGTACACAGACTTGCTGTAACCC
ACCTGCGAGCGATTCACAAACTATTgataagaaatcaaaaatctcGAAGA
TTGCTGCACAACTTGCTATGCTTCGCAAGAAACGTAGTATGGACGCTTGA
ACCAGTATTGTTTTGGGAATTTCGAGCAATGATAGGTAAAGTTTCTTAGG
ATAACTTTGCGGATTAGTACGCTAACAGGTAGCGTGTTACCTTAAAGAAG
CGGGAATTTACGACTTTAGACCGTTTTTCAATCATCAGTTGTTGGTACCT
TATATTAGCAGGCCTTTAAGATGAAAATGATAAGCTTTTGAAATACTTGA
CATGTTCATTTTTAATATAACTATGTTTTTCTacattacaaaaatatttt
atataatacctcaatttttatattttaaagcaacatgattattttgtaaa
tatataTCGTTAAGTCTATTCTACAATTACTGTAGACTTATAGTTTCCAC
TTCCCAAGATTATACTTTTATCTAACGAAATTAAGATGTAGAACCCCTAG
AAAAGTTCGTGAAACGTGGAAAATAATAGTCTTACAGTACTATTTTATAT
ATAAGAAACTCGATGAACACAAGGATAGTTATAGCTCCAAATTATTTCTA
CGGGTTTATATTTTAATCGAAGTGTTATTATGTTTAGTAGATGATGGGTG
TGTGTTACTCGCAAGTCCATTCTTAGCTCTGTAAAGTTTTCCCAAATTTG
TACATTTATTGTGGCCCTGGAGTAACTTTTTTTCTCGTCTGAGAATACTG
TATCCATTTAATTTGTATTTTGGCCTTTTGTCCAATTTGTGTCCTCCGAG
GTATGATGTGTAGCTTTTATAGCACTTTACAATACAGCTCTTTCATATGA
AAAAGTCTCTAGTTTCTTAGTGTTGTTTCTGTTTTTGAGGTTGTCATGGG
TGTTTGATGGTACGAGATGTACGAGTTAACCCCTTACTCCTTCCTTTCTT
CAACTGTAAAAGCTTTGATGTCTTGAATTTGATGTCTATTCAATATTTAG
TACCTTGGGTACCATGGATAAGGGTATCTTCTATTAGATAAGTAAGACTG
TTCTTGATAATTATAAGGGTTCCTGTAGAATGGTACTATATTGCGTCTCT
GGTAGTAGTATGATCTGTTAGGTATTCGACTTCTCTTGACGGGATCTTGA
ACGATGAAAGAATCAGTCTGGGTTAAGGTCGGANTTCGACTTCTCTTGAC
GGGGTCTTGAACGATAAAAGAATCAGTCTCCTGGGTCGAGGTCGGGTATC
TATAGATAGTGTCTCTTTTACCGTCCTCTAAAATCTCATATGTCTCATCA
GTAGGGTTAAGTTGTTGTTGTGGTAGATACGGCGCCTCTTCTTTTGGTTG
TTGTAGATATTGCGCCTCTTCTTGGTCCGGATCATATGGTTCTGTGATTT
CATTCTCAAACGGGTCTGGTTGTCGAATGGAATCACGCTGCGTTTTTTTC
TTCTGCTCTTCGTTAGTAGGAAGAACATTTGTTGGGATATCTGCGTGTTT
CTCCTTGTGTTTGCTTTCAACGCGCTTTGCTACATTCATGACTTTCTCTA
ACAGCTTTATACTGTTATTCAATTCGATTTGACTTCGACTGGATGCTGAA
TCGTCCTTTTTCTTTTCGCCATCCATCAGatagatatttttcttttcacc
GTGTGATTTCGCTTGATTAATCAATGAAATCTTCTTCTCCAGAATACCGA
TAGCAACGTTCAAGTCACTCACTGCTTCCTTAGTCTCCTTCTCTTCGTTA
TCCAAGGTCTTATTATCAATATGTTTTGGTGCTTTTTCGGTGATTTGACC
AATACCTTTAAGGACATCAACAACTTGGCTGGAAACTGTAGCATTCTCAG
CTACCACTTTCTCGCGTTGTTGGGAAGCGTCAGTCGTATCATTCTTTACC
GAAGGCTTTGATAAGGAAGCTTCACTTAATGAGGATTTAGTTTCAGCTGG
TTTTTCATCCACAGATTTCTGTTGTAACTGAGCCTTCTCTTCTTTGGGAC
TTTGAATCTCATTAACCTTCTTAACATCATTGGCTTGTTGTTTTTCGATC
ACATTCTCGATTTTCTTATCCATGTTCTTAACATCTTCAGACTTACCTTG
ATGAGCCAATGGCTTACCATCAAGTGCATTCATTGCATTTTCTGGTGTCA
TGGCAACAGGTTTCGGGTTCTCTTTCGGAGCCTCGACGGAattgattttc
gtattttcccTTTCCGACTCTTCTCTAGCTTGTTTCTCTAAAGCAGTCTT
CAGTTGTCTCTCACGATCGGCTTTTTCCGCTAACTCAGTCGCCCGTTCTT
GTGCTTTGACCGGATCCAACAGTGCAGCTTTTTCTTGATCACCGGGTTGT
TCCGTATTCAAGGCTAACCCGCCTTTAACATTCTCCTCTTCGTTCTTCAT
CAGTCTTTGAGTTTCTGAACCACCAAGAGCTAAACTATCTGGTGGTTCCT
TCAACGCTGATAACGTGTTGACAATCTTGTCTGAATCTAAGTAATCGTGT
TGTTCTAGTTTGGAGATTGTTTCCTCTGTATCACCAAATGACTTTGAGAA
TGGATCACCAGTTGCTTGTTTCGGCGATGATAAATGCTGTTGTTGTACCA
CCCCAGGCTCCCCATCACGCAATTCTAAAAGGAAACGAAGTAATACGAGT
TGTTAATTGTCGTAATCTTGTGCCGAATCTTTCCTTCTACGTCG

Coding sequence (CDS) from alignment at scaffold_123:70815..75958+

>TCONS_00047169 ID=TCONS_00047169|Name=TCONS_00047169|organism=Clytia hemisphaerica|type=CDS|length=4068bp|location=Sequence derived from alignment at scaffold_123:70815..75958+ (Clytia hemisphaerica)
ATGGGGAGGGTGCTCCTTCTTTTGGCGGGCATAACCTTCTTGTTTATCAT
TGATGGAGAATGCAAAAAGAAGAAGTCAGCATTTTCTTTCGATTCTTTAC
TCTCTGGTTTGGATGGTGACGAAAAAGCAATGTTTCGTGAAGAACTAGAA
AAAGAAGTCAAAAAGTTTCATGTTCCAAAACACAAATCACATACCAGTGC
TTCCAAACGAACCCGTCAACGTGAGCGACCTCGAGAGAGACCACGACATG
AGAGTTACAACACATACCGTGCTCCATCACGATACAGTCCACCTGCCGCA
CGATCATACCATAAACCTGTTACACCTGGAGTTTGTGACCCGATCTGTGA
GCATCAGTGTGTGCATGGATGCGATTTCAGATGCTGTATACCACACTATC
AAGTAGCTCATAACGTACCAAGGCCCTTACCTCATGTCTCACTGCCCGGC
TCATGTAGCCTGAGTTGTTCGCCTACATGTTATCCTGAGTGTAACCCGAA
CTGTTGTGCAGGTGGACCTTCGGGTATGTTCCAATCTGCAGACCTACAGG
CTATGTTCCCGCCAGTATGTCCTGCACCATGCCCTGGTCATTGCTTCCCA
GCCTGCGATGCTACCTGTTGTCGTTCAGCTCCAGCTGCTAATCCATTTAA
TAGAATGTACCAGCCACAGCCTGCACGACCAAGGGCACCACCTATGAGAC
CACCAGCACCTCGACCCTACCCACCTGTTCCACCTCAGCAGCCTGGAATG
ATGACTGGTATGTTACCACCAATGACCCCTACATCAGGTTTCGCACATTG
CGGTGCTCAATGTCCACAAAGTTGCGCTCCAACCTGCTTGACATCCTGTT
GCATGCAGTCTGCTGCCCCTCAACCACCACCTGTTGCTATGGCACCTTCC
CCAATGATGATGCCACCTGCTATGATGGCACCTCAACAACCTGCAATGTG
TCCTGGAAGCTGCCCTGCATCTTGTGCTCCCTCCTGTTTACCCTCATGTT
GCAGCCCTCTACCACAGATGCCTCCACCTGCTCCAGTCGGCATGTGCCCT
GGTCAGTGTCCATCATCATGTGCTCCTTCCTGCCTTCCATCATGCTGTTC
AGGTCAACCATCTATGATGATGCCTGCACAATTACGTACAGTCCAGAACA
CTCCTGATGTGAGTACAGCATCAGCTATAACGCCGAACCCTAATTCATGT
CCTGCGTACTGCCCAGATCATTGTTTACCGAACTGTACACAGACTTGCTG
TAACCCACCTGCGAGCGATTCACAAACTATTgataagaaatcaaaaatct
cGAAGATTGCTGCACAACTTGCTATGCTTCGCAAGAAACGTAGTATGGAC
GCTTGAATGGGGAGGGTGCTCCTTCTTTTGGCGGGCATAACCTTCTTGTT
TATCATTGATGGAGAATGCAAAAAGAAGAAGTCAGCATTTTCTTTCGATT
CTTTACTCTCTGGTTTGGATGGTGACGAAAAAGCAATGTTTCGTGAAGAA
CTAGAAAAAGAAGTCAAAAAGTTTCATGTTCCAAAACACAAATCACATAC
CAGTGCTTCCAAACGAACCCGTCAACGTGAGCGACCTCGAGAGAGACCAC
GACATGAGAGTTACAACACATACCGTGCTCCATCACGATACAGTCCACCT
GCCGCACGATCATACCATAAACCTGTTACACCTGGAGTTTGTGACCCGAT
CTGTGAGCATCAGTGTGTGCATGGATGCGATTTCAGATGCTGTATACCAC
ACTATCAAGTAGCTCATAACGTACCAAGGCCCTTACCTCATGTCTCACTG
CCCGGCTCATGTAGCCTGAGTTGTTCGCCTACATGTTATCCTGAGTGTAA
CCCGAACTGTTGTGCAGGTGGACCTTCGGGTATGTTCCAATCTGCAGACC
TACAGGCTATGTTCCCGCCAGTATGTCCTGCACCATGCCCTGGTCATTGC
TTCCCAGCCTGCGATGCTACCTGTTGTCGTTCAGCTCCAGCTGCTAATCC
ATTTAATAGAATGTACCAGCCACAGCCTGCACGACCAAGGGCACCACCTA
TGAGACCACCAGCACCTCGACCCTACCCACCTGTTCCACCTCAGCAGCCT
GGAATGATGACTGGTATGTTACCACCAATGACCCCTACATCAGGTTTCGC
ACATTGCGGTGCTCAATGTCCACAAAGTTGCGCTCCAACCTGCTTGACAT
CCTGTTGCATGCAGTCTGCTGCCCCTCAACCACCACCTGTTGCTATGGCA
CCTTCCCCAATGATGATGCCACCTGCTATGATGGCACCTCAACAACCTGC
AATGTGTCCTGGAAGCTGCCCTGCATCTTGTGCTCCCTCCTGTTTACCCT
CATGTTGCAGCCCTCTACCACAGATGCCTCCACCTGCTCCAGTCGGCATG
TGCCCTGGTCAGTGTCCATCATCATGTGCTCCTTCCTGCCTTCCATCATG
CTGTTCAGGTCAACCATCTATGATGATGCCTGCACAATTACGTACAGTCC
AGAACACTCCTGATGTGAGTACAGCATCAGCTATAACGCCGAACCCTAAT
TCATGTCCTGCGTACTGCCCAGATCATTGTTTACCGAACTGTACACAGAC
TTGCTGTAACCCACCTGCGAGCGATTCACAAACTATTgataagaaatcaa
aaatctcGAAGATTGCTGCACAACTTGCTATGCTTCGCAAGAAACGTAGT
ATGGACGCTTGAATGGGGAGGGTGCTCCTTCTTTTGGCGGGCATAACCTT
CTTGTTTATCATTGATGGAGAATGCAAAAAGAAGAAGTCAGCATTTTCTT
TCGATTCTTTACTCTCTGGTTTGGATGGTGACGAAAAAGCAATGTTTCGT
GAAGAACTAGAAAAAGAAGTCAAAAAGTTTCATGTTCCAAAACACAAATC
ACATACCAGTGCTTCCAAACGAACCCGTCAACGTGAGCGACCTCGAGAGA
GACCACGACATGAGAGTTACAACACATACCGTGCTCCATCACGATACAGT
CCACCTGCCGCACGATCATACCATAAACCTGTTACACCTGGAGTTTGTGA
CCCGATCTGTGAGCATCAGTGTGTGCATGGATGCGATTTCAGATGCTGTA
TACCACACTATCAAGTAGCTCATAACGTACCAAGGCCCTTACCTCATGTC
TCACTGCCCGGCTCATGTAGCCTGAGTTGTTCGCCTACATGTTATCCTGA
GTGTAACCCGAACTGTTGTGCAGGTGGACCTTCGGGTATGTTCCAATCTG
CAGACCTACAGGCTATGTTCCCGCCAGTATGTCCTGCACCATGCCCTGGT
CATTGCTTCCCAGCCTGCGATGCTACCTGTTGTCGTTCAGCTCCAGCTGC
TAATCCATTTAATAGAATGTACCAGCCACAGCCTGCACGACCAAGGGCAC
CACCTATGAGACCACCAGCACCTCGACCCTACCCACCTGTTCCACCTCAG
CAGCCTGGAATGATGACTGGTATGTTACCACCAATGACCCCTACATCAGG
TTTCGCACATTGCGGTGCTCAATGTCCACAAAGTTGCGCTCCAACCTGCT
TGACATCCTGTTGCATGCAGTCTGCTGCCCCTCAACCACCACCTGTTGCT
ATGGCACCTTCCCCAATGATGATGCCACCTGCTATGATGGCACCTCAACA
ACCTGCAATGTGTCCTGGAAGCTGCCCTGCATCTTGTGCTCCCTCCTGTT
TACCCTCATGTTGCAGCCCTCTACCACAGATGCCTCCACCTGCTCCAGTC
GGCATGTGCCCTGGTCAGTGTCCATCATCATGTGCTCCTTCCTGCCTTCC
ATCATGCTGTTCAGGTCAACCATCTATGATGATGCCTGCACAATTACGTA
CAGTCCAGAACACTCCTGATGTGAGTACAGCATCAGCTATAACGCCGAAC
CCTAATTCATGTCCTGCGTACTGCCCAGATCATTGTTTACCGAACTGTAC
ACAGACTTGCTGTAACCCACCTGCGAGCGATTCACAAACTATTgataaga
aatcaaaaatctcGAAGATTGCTGCACAACTTGCTATGCTTCGCAAGAAA
CGTAGTATGGACGCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030067XLOC_030067Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047169-proteinTCONS_00047169-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047169-exon-scaffold_123-1491911889:70815..71004TCONS_00047169-exon-scaffold_123-1491911889:70815..71004Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1510915933:70815..71004TCONS_00047169-exon-scaffold_123-1510915933:70815..71004Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1575043694:70815..71004TCONS_00047169-exon-scaffold_123-1575043694:70815..71004Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1491911889:71262..71440TCONS_00047169-exon-scaffold_123-1491911889:71262..71440Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1510915933:71262..71440TCONS_00047169-exon-scaffold_123-1510915933:71262..71440Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1575043694:71262..71440TCONS_00047169-exon-scaffold_123-1575043694:71262..71440Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1491911889:71931..71960TCONS_00047169-exon-scaffold_123-1491911889:71931..71960Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1510915933:71931..71960TCONS_00047169-exon-scaffold_123-1510915933:71931..71960Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1575043694:71931..71960TCONS_00047169-exon-scaffold_123-1575043694:71931..71960Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1491911889:72208..74441TCONS_00047169-exon-scaffold_123-1491911889:72208..74441Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1510915933:72208..74441TCONS_00047169-exon-scaffold_123-1510915933:72208..74441Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1575043694:72208..74441TCONS_00047169-exon-scaffold_123-1575043694:72208..74441Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1491911889:74505..75958TCONS_00047169-exon-scaffold_123-1491911889:74505..75958Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1510915933:74505..75958TCONS_00047169-exon-scaffold_123-1510915933:74505..75958Clytia hemisphaericaexon
TCONS_00047169-exon-scaffold_123-1575043694:74505..75958TCONS_00047169-exon-scaffold_123-1575043694:74505..75958Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:70815..75958 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.101847	0.15166	0.193519	0.283753	0.218546	0	3.08647	4.0054	2.88967	3.44509	4.02244	2.46499	11.1663	11.3077	7.44338	20.5796	10.6354	11.4576	0.150884	0.203531	6.3137	7.37053	5.37909	4.53354	6.84104	7.98102	1.50213	0.405763	0.0609245	0.0827632
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047169 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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