TCONS_00047171 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047171
Unique NameTCONS_00047171
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length872

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047171 ID=TCONS_00047171|Name=TCONS_00047171|organism=Clytia hemisphaerica|type=transcript|length=872bp
aatttcatactcAAGATGTGCATAAATGCCAAATcgttaaaaacgaaagt
ggttttttATACCGCATGTGTCTGGCAGTAGTTGCAAAGCAGCTATATGA
TAAACGACAAGAAttatgaataaaagaaaaatatgaatcTTTCCACATTT
TGTGTTTTCTTTGCGATTTTTTCATTGGTTTCTTGTAAACCAGCCACCAA
AGAAAATGATGTTGAAACATCtttaatgaaagatattttggaACGTGCTT
TTGGATTGGATAAAAAGAAGGAAGGAGTGAGcgaaatttcaaagaaagat
gAAGTTACTTCACTTAAACAAGATCAAGCGAACGATAGACGTTCACACGT
TGGGGCAAGTCATGATGACACGCGTGAGATCTTGGGACGATGTGACATTA
ACAAGAAGTGTGAAGCCAGTCAATACTGCGATGGaatgttttgttataaa
tgCAGAACAGAAGGACATCACTGTGATTTGAACGGAGAATGTTGTGCTGG
ATCAGAATGTCAGTTTGGAATTTGTACCAAAGGAGCTGCTCAAGGAGACC
CTGGTACCTTTTGTGATATCGCCAAAGACTGCAAAGGCAAAGATGTGTGC
TGTATTCGCGAAATTTCGATCAGCCATcatcattccatttgtaaactCAT
GTTAAATGAACACGAATCATGCGGACCAATCAATCTCTTCCATCAAGATA
CAATGCGTGCGCATATGGAACCTATCTGTGGTCCTTGCAAAGCTGGACTA
TCTTGCAAAGGTGTTGGAATTTTCGGACGACACAGTATCTGCCTTCCCGA
AAACGAAGAATAATTGatggttttattttttgtatattATTTTGTaatct
tttctaaaaaattaaatctaCC
Run BLAST on NCBI

protein sequence of TCONS_00047171-protein

>TCONS_00047171-protein ID=TCONS_00047171-protein|Name=TCONS_00047171-protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
MNLSTFCVFFAIFSLVSCKPATKENDVETSLMKDILERAFGLDKKKEGVS
EISKKDEVTSLKQDQANDRRSHVGASHDDTREILGRCDINKKCEASQYCD
GMFCYKCRTEGHHCDLNGECCAGSECQFGICTKGAAQGDPGTFCDIAKDC
KGKDVCCIREISISHHHSICKLMLNEHESCGPINLFHQDTMRAHMEPICG
PCKAGLSCKGVGIFGRHSICLPENEE
Run BLAST on NCBI

transcript from alignment at scaffold_123:87627..93626+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047171 ID=TCONS_00047171|Name=TCONS_00047171|organism=Clytia hemisphaerica|type=transcript|length=6000bp|location=Sequence derived from alignment at scaffold_123:87627..93626+ (Clytia hemisphaerica)
aatttcatactcAAGATGTGCATAAATGCCAAATcgttaaaaacgaaagt ggttttttATACCGCATGTGTCTGGCAGTAGTTGCAAAGCAGCTATATGA TAAACGACAAGAAttatgaataaaagaaaaatatgaatcTTTCCACATTT TGTGTTTTCTTTGCGATTTTTTCATTGGTTTCTTGTAAACCAGCCACCAA AGAAAATGATGTTGAAACATCtttaatgaaagatattttggaACGTGCTT TTGGATTGGATAAAAAGAAGGAAGGAGTGAGcgaaatttcaaagaaagat gAAGTTACTTCACTTAAACAAGATCAAGCGAACGATAGAGTGAGTGCTTT TCGATTTTATTATAAAACCAAATCTTTCGAAATTTACAGTATCTTCTAAA CTTGTATTTCATAACATCATCCATTCTGCACATACAATTCTCTGCTCTAA AGCGATATGGTGAATGCGACCATCTGACTTGGTTGTTCAGTCAAAACATT CATAGCCGCGCTGccatttgcttgaaaacgaaagcgaaagcggttggatt ctaatgtttttatttggtgcgattgttttgatttagccAATCAGCGCGCT CAAAATCTCATCTAATAATTATCCCAAAACTGGCTGAAAAAGATGAAACT AGTGCGCCAACCTAGGCAGATTCTCTTGCGGAGCCGTGGTCCTTAGAGTG CATACTTGCCAACGCTGAGTAATCAGAATCTGGTCGGAGATTAGTGAATC AGAGGAATCAAAATTGTGTTCCAGTAGCAAAGGAAAAAGTTTAGGCTAAA TTGAAATAACAATCGAGTCAGATATACAGTGGAACCTGcgtaactcgaac ctctataactcgaacaagagTTTTAAGGCCTCTTCAGTGAGCAAACTCTT TTAAACAAGTCTCTTTGACTCGagatttccataactcgaacaaattccaA TTCCCCATATGcgcgttcgagttatggagattccacCGTATTTACTTTGT ACTTTTCTTTgatatttgacatttttcttcACTATTCTGTACACGTTTTA AGCGTTCACACGTTGGGGCAAGTCATGATGACACGCGTGAGATCTTGGGA CGATGTGACATTAACAAGAAGTGTGAAGCCAGTCAATACTGCGATGGaat gttttgttataaatgCAGAACAGAAGGACATCACTGTGATTTGAACGgta taaacacccctgtctcacagacccggtggaaccttttcctcagtggggat aaaaatccctATAGAAGTCCCAACGTCCTAATGGTGATAGATATTCTATT GTTTataggttaaaaaatccagtggggatggttttaaTTTNTAACTCTCT GCTCTAAAGCGATATGGTGAATGCGACCATCTGACATAGCCGCGCTGcaa tttgcttgaaaacgaaagcgaaagcggttggattctaatgtttttatttg gtgcgattgttttgatttagccAATCAGCGCGCTCAAAATCTCATCTAAT AATTATCCCAAAACTGGCTGAAAAAGATGAAACTAGTGCGCCAACCTAGG CAGATTCTCTTGCGGAGCCGTGGTCCTTAGAGTGCATACTTGCCAACGCT GAGTAATCAGAATCTGGTCGGAGATTAGTGAATCAGAGGAATCAAAATTG TGTTCCAGTAGCAAAGGAAAAAGTTTAGGCTAAATTGAAATAACAATCGA GTCAGATATACAGTGGAACCTGcgtaactcgaacctctataactcgaaca agagTTTTAAGGCCTCTTCAGTGAGCAAACTCTTTTAAACAAGTCTCTTT GACTCGagatttccataactcgaacaaattccaATTCCCCATATGcgcgt tcgagttatggagattccacCGTATTTACTTTGTACTTTTCTTTgatatt tgacatttttcttcACTATTCTGTACACGTTTTAAGCGTTCACACGTTGG GGCAAGTCATGATGACACGCGTGAGATCTTGGGACGATGTGACATTAACA AGAAGTGTGAAGCCAGTCAATACTGCGATGGaatgttttgttataaatgC AGAACAGAAGGACATCACTGTGATTTGAACGgtataaacacccctgtctc acagacccggtggaaccttttcctcagtggggataaaaatccctATAGAA GTCCCAACGTCCTAATGGTGATAGATATTCTATTGTTTataggttaaaaa atccagtggggatggttttaatttttaaacatttaatttcgatTGGGAAT GAAATATAAGTCAGTTTCCCAGTGGCGCTAAAATTCCAAGATATTTTACT TCTAGGGACGATTTTTTCTAGTGGGGTTGCGGCTTCAGCGGGtttatgac acaggggtgtgtatAACAGATTTGGGAAAATTACCCTGATTGATTACTTA CTCCTCGCAAAAACCATTCCCCAGAAAACAGAGACAATATTGACCCGTCT CTCTGCACGAGGGAAATTGATCTTGTGGGGTGGGGGTTGGTATTGACCGC TTTTTCATTATTTAAGATGAAATTTAAGGGGATAAATTATGTTTCAAATA GAATCTTGATTCTTTATTTGAACATGGGTGTTAAAGTTAAAGACGACACT TCAAAAGTGTTAAATTTACAATCCCACTCATCTAAAACCGTTAATTAGAA ACCACCAATCATTTACATCGATTTTTTCTCCCATACTAGGAGAATGTTGT GCTGGATCAGAATGTCAGTTTGGAATTTGTACCAAAGGAGCTGCTCAAGG AGACCCTGGTACCTTTTGTGATATCGCCAAAGACTGCAAAGGTATTGTTT TTCTGATGGTATTATTGGTATTGCTGACTATATGTGATACCACCGTCAGA TAACTCAGCCCCTACTTTAAAGACGTCAAGTTTAGAAAATGGTTACTCTA AGGTACCCAAtaagaaatcttgaaatttctaGAATGATCAAAGTTAGTCA AATTAATCCCTATAAGGGTAAATTCACAACGTTTTCCTTTtccctccttt ttagtcccgctaagggtctgAGGGTCGAAATTCGTgtggcacatacccgt caggtCGCAACTCTAGTACCCCCCTCCCTCGGGCGAAAATATTCCTTATA CATTTGAttctttcagaaaatgaaaGTGTCTAAACATTTTGTCAGCTACA CTAAAAATCTTTACTTATTTCTGTCAGGCAAAGATGTGTGCTGTATTCGC GAAATTTCGATCAGCCATcatcattccatttgtaaactCATGTTAAATGA ACACGAATCATGCGGACCAATCAATCTCTTCCATCAAGATACAATGCGTG CGCATATGGAACCTATCTGTGGTCCTTGCAAAGCTGGACTATCTTGCAAA GGTGTTGGGTAAGTAAAAGATGTATAAAGTGTCTGGAGGCTACTTTATTA AAAACATAGGTGTTAATATTTGCGGACCTTATAAAGGGACTTTCTTTTCA ACAAAGTTTATCTAAGGGCAAGGAAACCcagaaaaaatctttctaaagGA AGGAAATGTTTCGGAAATTTCCATAGGATCACTTGTAATCAATTTGATTC TTTCTTAGGTTCACAATTTTCTTAAACTTAACAAGTTTACTTGGTCCAAA ACGTGGCAGACGCCTTTAGGATGCTCCCTTTTTGTCCCTTCCCCTACTTT ATTTCTTGAAatgttgtttaaaatttttcggaAGAATGGTAAAGTACTTA TGAGATAATCTTGGAGATATTAAATTTCTATCTTACAAATGGTAATAATG TAAAAGCTGTTGTGAAATAGATACTCTTTTGAGAAGTTTCATACTGAATT TCCCAGGTCTTTCAAATTGACAGTTTCTTGCTGTGATTCGTAATCATTTT CAGTTTCTTGCATCTCCTGTCCTTTTGTATCTGGTAGAAACCAGCAAAGA ATACCAGCCAATAGTCCCAAACTCCCCATAATGATAAAGGGCAAACTTTC ATGAATCACTTTGACACCTTTGGCAATCCATGGTGCACTTGCTGCTCCGA TACGACTTGTTATTTGTAAGAACCCCATTGCTTCAGATTTGATCTTAGTT GGGTACAGCTCAACAGACCATACATAGATTACTTGGAAACTAATGGTTAT TAAGAATTTGCCGATCATTCCGAATGTGGTTCGCACAACTTGGTAACTTG TTGGTATGAAAGCCACAGCAAGTGTTAAAACACCTGTTAGAAATGTACAA ACCATTGTTGTTTTTTGCCTTCCAAATCGGTTCGGGAAATCGATAACACA AAGCATAGCTGGGATCTCTACCACACTAACCAATGCAAAATCACGGTACA AGGAGCCTCCAAAATCACCAACAGCTAACGAGATTCCGTAATAGACCATA CCGTTGATCATCCAAGCGAATCCTAATAAAATGGTCTTGCGTCTCCTCTT GTTTGTATTGAATAATTCCTTTGGGTTTGATTTATGTGTTGTGTCTTTAA GTGGTGCTAGCTCCTCATTCGTACTCGTTTCTTTCCCATTCCATTTGGCA ATTCTCTCGAACACTTGTAGAGCATCTTCCATCCTATTCTTCAATCTTAA CCAGCGAATGGATTCAGGAATGAATTtccaaaacaacatcaaaacaaaat acgGAGCTGAACAAACCACCATTAATGTTTGCCATTCTTGAATAAAGTAT GCAATCAATGGAGTTGCACAGACTGCTAGCGAGTAACCTAATCCAATGAT TACCGAAGCCTGAGCTCGATGTTCGGTACCAACCAACTCCATCGTTATTG TAAATAAATTTACCGCAACTCCAGGGATGAAAAATCCAACCACGAATCGG AACAGAATAAACAGGTAGACATTACCAACAAACGGTGAAACAGTACCAGC TAAAACTATCATAAAATGGGAGAAAAAGAAAGCCTTTTTACGACCATAGT TATCTGAGTGCCATCCAATTGCCAGAGCTCCAAACATCCAACCAATAAAA AGAATCGATGTCGTCATGTAAATTATCCAATCGCGATCACAATAAATATC GAATTCTGTAACAATTGAATATTCCTTTGGTTTCGTAAACTCCCATTCAG TCCTTGGTATATTGCAACGTAGTTTGTTTTGACTTGTGAATGTACCGTTC AAGTCGCAAACAGTACTGTTTGAAGCACATCTCCAGTCTGGTTCCAACCC AGCAAAAACCATAATCAAGATTTGGAACAGTGTTGGAAATGTAAACAGGA AGAAAACAACTTCCaataagatttgaaattttccatGACTTCCAATTTTC TCTAGGAATCCTTCAACTGTCAGCTGTTCCTTTTTCTCCATGCTCTGTTT TTANTCTAGGAATCCTTCAACTGTCAGCTGTTCCTTTTCCTCCATGCTAT GTTTTTAAATCTGCTTTAATCGATGCTACTATAAAATTGGATATATCTTT CCTTGCAGAGAATACAGCGTTGCTATTAAGTTATGCAACTGACATCTCAC AACTaaggaaactttttttgctgCTTATTTAACCCCTTAAGTACCTTCAA AGTATGTACATTCACAAATCTATAAAAACCTTATGTAAACAAAACCCAAT AACTTAACACTAGCActctccaaaattttcaaaggtaTACAATTACTTCA AAAATTTGTTTGTTCGTCTTAATTCTTTCAGAGGTTTTTTCAGACTACTT GTTTCAATAGTTTGTTATTATAGCATTATGTATGTTGCCATAAGTACGGC ATAAACTTTTAAGTATAGTCGTATATAATATCCATCAGCATGGTTGCACT GTATTTTTCGTtaaccctgaaaatttcaacccCAGACCCTATAGAATACT TAGTTTTAATAGGTGTAATTTCGTCACTTCGCCCAATTATTGTACttata aatgaaatatttggtCTTTTgattacttttcattttctgtttCAGAATTT TCGGACGACACAGTATCTGCCTTCCCGAAAACGAAGAATAATTGatggtt ttattttttgtatattATTTTGTaatcttttctaaaaaattaaatctaCC

Coding sequence (CDS) from alignment at scaffold_123:87627..93626+

>TCONS_00047171 ID=TCONS_00047171|Name=TCONS_00047171|organism=Clytia hemisphaerica|type=CDS|length=3405bp|location=Sequence derived from alignment at scaffold_123:87627..93626+ (Clytia hemisphaerica)
atgaatcTTTCCACATTTTGTGTTTTCTTTGCGATTTTTTCATTGGTTTC
TTGTAAACCAGCCACCAAAGAAAATGATGTTGAAACATCtttaatgaaag
atattttggaACGTGCTTTTGGATTGGATAAAAAGAAGGAAGGAGTGAGc
gaaatttcaaagaaagatgAAGTTACTTCACTTAAACAAGATCAAGCGAA
CGATAGACGTTCACACGTTGGGGCAAGTCATGATGACACGCGTGAGATCT
TGGGACGATGTGACATTAACAAGAAGTGTGAAGCCAGTCAATACTGCGAT
GGaatgttttgttataaatgCAGAACAGAAGGACATCACTGTGATTTGAA
CGGAGAATGTTGTGCTGGATCAGAATGTCAGTTTGGAATTTGTACCAAAG
GAGCTGCTCAAGGAGACCCTGGTACCTTTTGTGATATCGCCAAAGACTGC
AAAGGCAAAGATGTGTGCTGTATTCGCGAAATTTCGATCAGCCATcatca
ttccatttgtaaactCATGTTAAATGAACACGAATCATGCGGACCAATCA
ATCTCTTCCATCAAGATACAATGCGTGCGCATATGGAACCTATCTGTGGT
CCTTGCAAAGCTGGACTATCTTGCAAAGGTGTTGGAATTTTCGGACGACA
CAGTATCTGCCTTCCCGAAAACGAAGAATAAatgaatcTTTCCACATTTT
GTGTTTTCTTTGCGATTTTTTCATTGGTTTCTTGTAAACCAGCCACCAAA
GAAAATGATGTTGAAACATCtttaatgaaagatattttggaACGTGCTTT
TGGATTGGATAAAAAGAAGGAAGGAGTGAGcgaaatttcaaagaaagatg
AAGTTACTTCACTTAAACAAGATCAAGCGAACGATAGACGTTCACACGTT
GGGGCAAGTCATGATGACACGCGTGAGATCTTGGGACGATGTGACATTAA
CAAGAAGTGTGAAGCCAGTCAATACTGCGATGGaatgttttgttataaat
gCAGAACAGAAGGACATCACTGTGATTTGAACGGAGAATGTTGTGCTGGA
TCAGAATGTCAGTTTGGAATTTGTACCAAAGGAGCTGCTCAAGGAGACCC
TGGTACCTTTTGTGATATCGCCAAAGACTGCAAAGGCAAAGATGTGTGCT
GTATTCGCGAAATTTCGATCAGCCATcatcattccatttgtaaactCATG
TTAAATGAACACGAATCATGCGGACCAATCAATCTCTTCCATCAAGATAC
AATGCGTGCGCATATGGAACCTATCTGTGGTCCTTGCAAAGCTGGACTAT
CTTGCAAAGGTGTTGGAATTTTCGGACGACACAGTATCTGCCTTCCCGAA
AACGAAGAATAAatgaatcTTTCCACATTTTGTGTTTTCTTTGCGATTTT
TTCATTGGTTTCTTGTAAACCAGCCACCAAAGAAAATGATGTTGAAACAT
CtttaatgaaagatattttggaACGTGCTTTTGGATTGGATAAAAAGAAG
GAAGGAGTGAGcgaaatttcaaagaaagatgAAGTTACTTCACTTAAACA
AGATCAAGCGAACGATAGACGTTCACACGTTGGGGCAAGTCATGATGACA
CGCGTGAGATCTTGGGACGATGTGACATTAACAAGAAGTGTGAAGCCAGT
CAATACTGCGATGGaatgttttgttataaatgCAGAACAGAAGGACATCA
CTGTGATTTGAACGGAGAATGTTGTGCTGGATCAGAATGTCAGTTTGGAA
TTTGTACCAAAGGAGCTGCTCAAGGAGACCCTGGTACCTTTTGTGATATC
GCCAAAGACTGCAAAGGCAAAGATGTGTGCTGTATTCGCGAAATTTCGAT
CAGCCATcatcattccatttgtaaactCATGTTAAATGAACACGAATCAT
GCGGACCAATCAATCTCTTCCATCAAGATACAATGCGTGCGCATATGGAA
CCTATCTGTGGTCCTTGCAAAGCTGGACTATCTTGCAAAGGTGTTGGAAT
TTTCGGACGACACAGTATCTGCCTTCCCGAAAACGAAGAATAAatgaatc
TTTCCACATTTTGTGTTTTCTTTGCGATTTTTTCATTGGTTTCTTGTAAA
CCAGCCACCAAAGAAAATGATGTTGAAACATCtttaatgaaagatatttt
ggaACGTGCTTTTGGATTGGATAAAAAGAAGGAAGGAGTGAGcgaaattt
caaagaaagatgAAGTTACTTCACTTAAACAAGATCAAGCGAACGATAGA
CGTTCACACGTTGGGGCAAGTCATGATGACACGCGTGAGATCTTGGGACG
ATGTGACATTAACAAGAAGTGTGAAGCCAGTCAATACTGCGATGGaatgt
tttgttataaatgCAGAACAGAAGGACATCACTGTGATTTGAACGGAGAA
TGTTGTGCTGGATCAGAATGTCAGTTTGGAATTTGTACCAAAGGAGCTGC
TCAAGGAGACCCTGGTACCTTTTGTGATATCGCCAAAGACTGCAAAGGCA
AAGATGTGTGCTGTATTCGCGAAATTTCGATCAGCCATcatcattccatt
tgtaaactCATGTTAAATGAACACGAATCATGCGGACCAATCAATCTCTT
CCATCAAGATACAATGCGTGCGCATATGGAACCTATCTGTGGTCCTTGCA
AAGCTGGACTATCTTGCAAAGGTGTTGGAATTTTCGGACGACACAGTATC
TGCCTTCCCGAAAACGAAGAATAAatgaatcTTTCCACATTTTGTGTTTT
CTTTGCGATTTTTTCATTGGTTTCTTGTAAACCAGCCACCAAAGAAAATG
ATGTTGAAACATCtttaatgaaagatattttggaACGTGCTTTTGGATTG
GATAAAAAGAAGGAAGGAGTGAGcgaaatttcaaagaaagatgAAGTTAC
TTCACTTAAACAAGATCAAGCGAACGATAGACGTTCACACGTTGGGGCAA
GTCATGATGACACGCGTGAGATCTTGGGACGATGTGACATTAACAAGAAG
TGTGAAGCCAGTCAATACTGCGATGGaatgttttgttataaatgCAGAAC
AGAAGGACATCACTGTGATTTGAACGGAGAATGTTGTGCTGGATCAGAAT
GTCAGTTTGGAATTTGTACCAAAGGAGCTGCTCAAGGAGACCCTGGTACC
TTTTGTGATATCGCCAAAGACTGCAAAGGCAAAGATGTGTGCTGTATTCG
CGAAATTTCGATCAGCCATcatcattccatttgtaaactCATGTTAAATG
AACACGAATCATGCGGACCAATCAATCTCTTCCATCAAGATACAATGCGT
GCGCATATGGAACCTATCTGTGGTCCTTGCAAAGCTGGACTATCTTGCAA
AGGTGTTGGAATTTTCGGACGACACAGTATCTGCCTTCCCGAAAACGAAG
AATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030068XLOC_030068Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047171-exon-scaffold_123-1491911889:87627..87965TCONS_00047171-exon-scaffold_123-1491911889:87627..87965Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1510915933:87627..87965TCONS_00047171-exon-scaffold_123-1510915933:87627..87965Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1575043694:87627..87965TCONS_00047171-exon-scaffold_123-1575043694:87627..87965Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1491911889:89563..89707TCONS_00047171-exon-scaffold_123-1491911889:89563..89707Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1510915933:89563..89707TCONS_00047171-exon-scaffold_123-1510915933:89563..89707Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1575043694:89563..89707TCONS_00047171-exon-scaffold_123-1575043694:89563..89707Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1491911889:90316..90417TCONS_00047171-exon-scaffold_123-1491911889:90316..90417Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1510915933:90316..90417TCONS_00047171-exon-scaffold_123-1510915933:90316..90417Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1575043694:90316..90417TCONS_00047171-exon-scaffold_123-1575043694:90316..90417Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1491911889:90804..90984TCONS_00047171-exon-scaffold_123-1491911889:90804..90984Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1510915933:90804..90984TCONS_00047171-exon-scaffold_123-1510915933:90804..90984Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1575043694:90804..90984TCONS_00047171-exon-scaffold_123-1575043694:90804..90984Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1491911889:93522..93626TCONS_00047171-exon-scaffold_123-1491911889:93522..93626Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1510915933:93522..93626TCONS_00047171-exon-scaffold_123-1510915933:93522..93626Clytia hemisphaericaexon
TCONS_00047171-exon-scaffold_123-1575043694:93522..93626TCONS_00047171-exon-scaffold_123-1575043694:93522..93626Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047171-proteinTCONS_00047171-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:87627..93626 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.132585 0.209122 0.320189 0.0822765 0.428797 0.171071 2.49049 2.93846 5.34841 2.78567 3.52399 3.82156 7.93151 6.43006 5.10526 10.6644 7.92763 8.54673 0.142208 0.247864 5.11905 5.82312 5.66543 5.30854 5.15621 7.36754 1.1373 0.23492 0.0296965 0.060512
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006796Dickkopf_N
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO:0030178negative regulation of Wnt signaling pathway
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0030178 negative regulation of Wnt signaling pathway
cellular_component GO:0005576 extracellular region
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047171 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top